scHiGex: predicting single-cell gene expression based on single-cell Hi-C data

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scHiGex is a computational tool for predicting the single-cell gene expression data based on single-cell Hi-C data.

Download

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The standalone package of scHiGex can be downloaded from here.

scHiGex is also available for download on GitHub, and the link is here.

Reference

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Bishal Shrestha, Andrew Jordan Siciliano, Hao Zhu, Tong Liu, Zheng Wang, scHiGex: predicting single-cell gene expression based on single-cell Hi-C data, NAR Genomics and Bioinformatics, Volume 7, Issue 1, March 2025, lqaf002, https://doi.org/10.1093/nargab/lqaf002

Contact

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Dr. Zheng Wang
Department of Computer Science
University of Miami