SCL: A lattice-based approach to infer three-dimensional chromosome structures from single-cell Hi-C data

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SCL (Single-Cell Lattice) is a computational method to reconstruct high-resolution 3D chromosome structures based on the zero-inflated single-cell Hi-C data.

Download

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The C++ source code and a user manual of SCL can be downloaded from here.

Reference

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Zhu,H. and Wang,Z. (2019) SCL: a lattice-based approach to infer 3D chromosome structures from single-cell Hi-C data. Bioinformatics, in press.

Contact

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For any questions or suggestions, please contact:
Dr. Zheng Wang
Department of Computer Science
University of Miami