BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9ZNV8
         (156 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4PAC-A nrPDB                                                          319   4e-88
4G78-A nrPDB                                                          166   5e-42
3US6-A nrPDB                                                          146   3e-36
4EUK-B nrPDB                                                          145   6e-36
1WN0-A nrPDB                                                          111   2e-25
2Q4F-A nrPDB                                                          110   2e-25
1SR2-A nrPDB                                                           30   0.30 
4C9B-B nrPDB                                                           28   2.1  
5Z57-V nrPDB                                                           27   3.0  
3K10-A nrPDB                                                           27   5.1  
4XD0-A nrPDB                                                           26   6.4  
2IWR-A nrPDB                                                           26   8.6  

>4PAC-A nrPDB
          Length = 200

 Score =  319 bits (817), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 60
           MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS
Sbjct: 45  MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 104

Query: 61  NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ 120
           NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ
Sbjct: 105 NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ 164

Query: 121 QVDIEYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN 156
           QVDIEYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN
Sbjct: 165 QVDIEYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN 200


>4G78-A nrPDB
          Length = 152

 Score =  166 bits (419), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 77/141 (54%), Positives = 107/141 (75%), Gaps = 1/141 (0%)

Query: 7   QLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARAL 66
            L R+ RD+  +++QQG+LDDQF++L+KLQDD SPDFV EV+++FF+D  KL++NM+RAL
Sbjct: 6   HLHRKLRDHEAAMFQQGYLDDQFSQLQKLQDDTSPDFVIEVMTMFFDDSEKLLNNMSRAL 65

Query: 67  DTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEY 126
           +    V+F Q+ A  HQ KGSS+SVGA RVK +C +F+  CEA+N EGCVRCLQQ+  EY
Sbjct: 66  EQV-PVNFKQIDAHAHQQKGSSASVGAARVKNVCGTFRNFCEAQNLEGCVRCLQQLQQEY 124

Query: 127 KALKTKLQDMFNLEKQIIQAG 147
             LK  L+ +F L+++I  AG
Sbjct: 125 SLLKNNLKYLFKLQQEIKTAG 145


>3US6-A nrPDB
          Length = 153

 Score =  146 bits (369), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 113/152 (74%), Gaps = 1/152 (0%)

Query: 5   IAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMAR 64
           + Q++RQ+ DY  S++ +GFLD QF +L++LQD+ +P+FV EV+SLFF+D  +++ +++ 
Sbjct: 3   VGQMRRQWVDYIKSMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDLSF 62

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
           A+D   ++DF +V A VHQ KGSS+S+GA+RVK  CV+F+  CE +N + C RCLQQV  
Sbjct: 63  AVDQQ-SIDFKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRRCLQQVKQ 121

Query: 125 EYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN 156
           EY  +K KL+ +  LE+QI+ AGG +P +++N
Sbjct: 122 EYLLVKNKLETLLRLEQQIVAAGGSIPMMELN 153


>4EUK-B nrPDB
          Length = 159

 Score =  145 bits (366), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 74/151 (49%), Positives = 112/151 (74%), Gaps = 1/151 (0%)

Query: 5   IAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMAR 64
           + Q Q+  +DYT SL+ +G LD QF +L++LQD+ +PDFVS+V++LFF+D  +++++++ 
Sbjct: 8   LVQKQKSLQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSL 67

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
           +LD    VDF +V   VHQLKGSSSS+GA+RVK  CV F+  CE +N E C RCLQQV  
Sbjct: 68  SLDQQ-VVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQ 126

Query: 125 EYKALKTKLQDMFNLEKQIIQAGGIVPQVDI 155
           EY  +K +L+ +F LE+QI+ +GG++P V++
Sbjct: 127 EYYLVKNRLETLFKLEQQIVASGGMIPAVEL 157


>1WN0-A nrPDB
          Length = 145

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 87/133 (65%), Gaps = 2/133 (1%)

Query: 6   AQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDG-SPDFVSEVLSLFFEDCVKLISNMAR 64
           A L+ Q      S++  G +D+QF +L+ LQ+DG +P FV+EV++LF +D  ++IS +A 
Sbjct: 4   AALREQLNALLSSMFASGLVDEQFQQLQMLQEDGGTPGFVAEVVTLFCDDADRIISELAA 63

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
            LD    VDF +V A VHQLKGSS+SVGA++VK  C+ F++ C+ KN +GC+  L  V  
Sbjct: 64  LLDQP-IVDFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQLCQDKNRDGCIMALAVVRN 122

Query: 125 EYKALKTKLQDMF 137
           E+  L+ K Q M 
Sbjct: 123 EFYDLRNKFQTML 135


>2Q4F-A nrPDB
          Length = 149

 Score =  110 bits (275), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/139 (43%), Positives = 93/139 (66%), Gaps = 2/139 (1%)

Query: 6   AQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDG-SPDFVSEVLSLFFEDCVKLISNMAR 64
           A L+ Q      S++ QG +D+QF +L+ LQD+G +P FVSEV++LF +D  ++I+ +A 
Sbjct: 4   AALRDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIAT 63

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
            L+    V+F +V A VHQLKGSS+SVGA++VK  C+ F++ C+ K+ +GC+  L  V  
Sbjct: 64  LLEQP-VVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRN 122

Query: 125 EYKALKTKLQDMFNLEKQI 143
           ++  L+ K Q M  LE+QI
Sbjct: 123 DFYDLRNKFQTMLQLEQQI 141


>1SR2-A nrPDB
          Length = 116

 Score = 30.4 bits (67), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 51  FFEDCVKLISNMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAK 110
            F D V    ++ R      T DF+ +  + H+LKG  + +     K LC + +     K
Sbjct: 39  LFVDTVP--DDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREK 96

Query: 111 NYEGCVRCLQQVDIEYKAL 129
           +  G  + +  +D   K+L
Sbjct: 97  DVPGIEKYISDIDSYVKSL 115


>4C9B-B nrPDB
          Length = 291

 Score = 27.7 bits (60), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 5/42 (11%)

Query: 12  FRDYTISLYQQGFL--DDQFTELKKLQDDGSPDFVSEVLSLF 51
           F+D+ I L     +  DDQFT +  L+DD +P+   +VL++F
Sbjct: 232 FKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPE---DVLNVF 270


>5Z57-V nrPDB
          Length = 908

 Score = 27.3 bits (59), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 5/56 (8%)

Query: 1   MDALIAQLQRQFRDYTISLYQQGFL--DDQFTELKKLQDDGSPDFVSEVLSLFFED 54
           ++ + A  +  F+D+ I L     +  DDQFT +  L+DD +P+   +VL++F  D
Sbjct: 336 IEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPE---DVLNVFKMD 388


>3K10-A nrPDB
          Length = 179

 Score = 26.6 bits (57), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 8/71 (11%)

Query: 12  FRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARALDTTGT 71
           FRD    L  QG +         L+D  S  F    L   FE   K IS + +    TGT
Sbjct: 61  FRDLVNRLVSQGLIG--------LKDKTSETFDLLPLKNLFEYAEKRISVLMKLQCYTGT 112

Query: 72  VDFSQVGASVH 82
           V  S V   +H
Sbjct: 113 VQLSHVQEKLH 123


>4XD0-A nrPDB
          Length = 417

 Score = 26.2 bits (56), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 5/35 (14%)

Query: 14  DYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVL 48
           DY I LY      D F E+    +D SP+F+S++L
Sbjct: 282 DYDIKLYS-----DNFDEILTACEDKSPEFISKLL 311


>2IWR-A nrPDB
          Length = 178

 Score = 25.8 bits (55), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 11/109 (10%)

Query: 39  GSPDFVSEVLSLFFEDCVKLISNMARALDT-----TGTVDFSQVGASVHQLKGSSSSVGA 93
           G  D V  V SL  E+  + +S +   L +      G +  + VG        S   VG 
Sbjct: 71  GWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGD 130

Query: 94  KRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALKTKLQDMFNLEKQ 142
            R + LC   K C     YE C      VD   +  +   Q +  L KQ
Sbjct: 131 ARARALCADMKRCS---YYETCATYGLNVD---RVFQEVAQKVVTLRKQ 173


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

4PAC-A nrPDB                                                          226   2e-60
3US6-A nrPDB                                                          202   4e-53
4G78-A nrPDB                                                          196   4e-51
4EUK-B nrPDB                                                          194   2e-50
2Q4F-A nrPDB                                                          179   5e-46
1WN0-A nrPDB                                                          176   4e-45

Sequences not found previously or not previously below threshold:

1C03-A nrPDB                                                           33   0.052
5Z57-V nrPDB                                                           30   0.38 
1BSF-A nrPDB                                                           29   1.1  
6EON-A nrPDB                                                           28   1.9  
3D3A-A nrPDB                                                           28   1.9  
2BQ8-X nrPDB                                                           28   2.4  
1CCW-B nrPDB                                                           27   4.0  
4C9B-B nrPDB                                                           27   4.8  
2JS9-A nrPDB                                                           27   5.2  
1SR2-A nrPDB                                                           26   7.1  
5UQ6-A nrPDB                                                           26   7.7  
4K87-A nrPDB                                                           26   8.1  
3A2K-A nrPDB                                                           26   9.0  
3DZU-A nrPDB                                                           26   9.2  
4OC7-A nrPDB                                                           26   9.3  


CONVERGED!
>4PAC-A nrPDB
          Length = 200

 Score =  226 bits (577), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 60
           MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS
Sbjct: 45  MDALIAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLIS 104

Query: 61  NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ 120
           NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ
Sbjct: 105 NMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQ 164

Query: 121 QVDIEYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN 156
           QVDIEYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN
Sbjct: 165 QVDIEYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN 200


>3US6-A nrPDB
          Length = 153

 Score =  202 bits (515), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 72/152 (47%), Positives = 113/152 (74%), Gaps = 1/152 (0%)

Query: 5   IAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMAR 64
           + Q++RQ+ DY  S++ +GFLD QF +L++LQD+ +P+FV EV+SLFF+D  +++ +++ 
Sbjct: 3   VGQMRRQWVDYIKSMFMEGFLDGQFLQLQQLQDENNPEFVFEVVSLFFDDSERILKDLSF 62

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
           A+D   ++DF +V A VHQ KGSS+S+GA+RVK  CV+F+  CE +N + C RCLQQV  
Sbjct: 63  AVDQQ-SIDFKKVDAHVHQFKGSSASIGAQRVKNSCVAFRNFCEEQNIDACRRCLQQVKQ 121

Query: 125 EYKALKTKLQDMFNLEKQIIQAGGIVPQVDIN 156
           EY  +K KL+ +  LE+QI+ AGG +P +++N
Sbjct: 122 EYLLVKNKLETLLRLEQQIVAAGGSIPMMELN 153


>4G78-A nrPDB
          Length = 152

 Score =  196 bits (497), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/144 (53%), Positives = 108/144 (75%), Gaps = 1/144 (0%)

Query: 7   QLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARAL 66
            L R+ RD+  +++QQG+LDDQF++L+KLQDD SPDFV EV+++FF+D  KL++NM+RAL
Sbjct: 6   HLHRKLRDHEAAMFQQGYLDDQFSQLQKLQDDTSPDFVIEVMTMFFDDSEKLLNNMSRAL 65

Query: 67  DTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEY 126
           +    V+F Q+ A  HQ KGSS+SVGA RVK +C +F+  CEA+N EGCVRCLQQ+  EY
Sbjct: 66  EQV-PVNFKQIDAHAHQQKGSSASVGAARVKNVCGTFRNFCEAQNLEGCVRCLQQLQQEY 124

Query: 127 KALKTKLQDMFNLEKQIIQAGGIV 150
             LK  L+ +F L+++I  AG  +
Sbjct: 125 SLLKNNLKYLFKLQQEIKTAGRSI 148


>4EUK-B nrPDB
          Length = 159

 Score =  194 bits (492), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/151 (49%), Positives = 112/151 (74%), Gaps = 1/151 (0%)

Query: 5   IAQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMAR 64
           + Q Q+  +DYT SL+ +G LD QF +L++LQD+ +PDFVS+V++LFF+D  +++++++ 
Sbjct: 8   LVQKQKSLQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSL 67

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
           +LD    VDF +V   VHQLKGSSSS+GA+RVK  CV F+  CE +N E C RCLQQV  
Sbjct: 68  SLDQQ-VVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQ 126

Query: 125 EYKALKTKLQDMFNLEKQIIQAGGIVPQVDI 155
           EY  +K +L+ +F LE+QI+ +GG++P V++
Sbjct: 127 EYYLVKNRLETLFKLEQQIVASGGMIPAVEL 157


>2Q4F-A nrPDB
          Length = 149

 Score =  179 bits (454), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/141 (42%), Positives = 93/141 (65%), Gaps = 2/141 (1%)

Query: 6   AQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDG-SPDFVSEVLSLFFEDCVKLISNMAR 64
           A L+ Q      S++ QG +D+QF +L+ LQD+G +P FVSEV++LF +D  ++I+ +A 
Sbjct: 4   AALRDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIAT 63

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
            L+    V+F +V A VHQLKGSS+SVGA++VK  C+ F++ C+ K+ +GC+  L  V  
Sbjct: 64  LLEQP-VVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRN 122

Query: 125 EYKALKTKLQDMFNLEKQIIQ 145
           ++  L+ K Q M  LE+QI  
Sbjct: 123 DFYDLRNKFQTMLQLEQQIQA 143


>1WN0-A nrPDB
          Length = 145

 Score =  176 bits (446), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 59/133 (44%), Positives = 87/133 (65%), Gaps = 2/133 (1%)

Query: 6   AQLQRQFRDYTISLYQQGFLDDQFTELKKLQDDG-SPDFVSEVLSLFFEDCVKLISNMAR 64
           A L+ Q      S++  G +D+QF +L+ LQ+DG +P FV+EV++LF +D  ++IS +A 
Sbjct: 4   AALREQLNALLSSMFASGLVDEQFQQLQMLQEDGGTPGFVAEVVTLFCDDADRIISELAA 63

Query: 65  ALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDI 124
            LD    VDF +V A VHQLKGSS+SVGA++VK  C+ F++ C+ KN +GC+  L  V  
Sbjct: 64  LLDQP-IVDFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQLCQDKNRDGCIMALAVVRN 122

Query: 125 EYKALKTKLQDMF 137
           E+  L+ K Q M 
Sbjct: 123 EFYDLRNKFQTML 135


>1C03-A nrPDB
          Length = 168

 Score = 33.1 bits (74), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 51  FFEDCVKLISNMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKEC 106
           F +      + M R LD  G  + +++    H LKGSS+++G +R+  +C   +  
Sbjct: 35  FIDQAQTTFAQMQRQLD--GEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQNL 88


>5Z57-V nrPDB
          Length = 908

 Score = 30.4 bits (67), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 1   MDALIAQLQRQFRDYTISLYQQGFL--DDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKL 58
           ++ + A  +  F+D+ I L     +  DDQFT +  L+DD +P+   +VL++F  D   +
Sbjct: 336 IEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPE---DVLNVFKMDPNFM 392

Query: 59  ISNMARALDTTGTVDFSQVGASVHQLKGSS 88
            +           +D     ++  Q  GSS
Sbjct: 393 ENEEKYKAIKKEILDEGDTDSNTDQDAGSS 422


>1BSF-A nrPDB
          Length = 278

 Score = 28.8 bits (63), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 7  QLQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLS--LFFEDCV 56
          Q  +Q+      +   G  D++F    K   DG+P     V+S  + F++  
Sbjct: 2  QFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSE 53


>6EON-A nrPDB
          Length = 779

 Score = 28.1 bits (61), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 19/140 (13%)

Query: 25  LDDQFTELKKLQDDGSPDFVSEVLSLFFE---------DCVKLISNMARALDTTGTVDFS 75
           +D+QF  LK+L+ D +P   SE  S +F+            +L+  M   LD   +    
Sbjct: 239 IDEQFKRLKELRPD-TPLMCSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNISFSL- 296

Query: 76  QVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALKTKLQD 135
                +     S    G          F   C + +Y+  +    +V  +Y  ++  L +
Sbjct: 297 ----YMTHGGTSFGHWGGANFPN----FSPTCTSYDYDAPINESGKVTPKYLEVRNLLGN 348

Query: 136 MFNLEKQIIQAGGIVPQVDI 155
                + + +    +P + I
Sbjct: 349 YLPEGETLPEIPDSIPTIAI 368


>3D3A-A nrPDB
          Length = 612

 Score = 28.1 bits (61), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 19/140 (13%)

Query: 25  LDDQFTELKKLQDDGSPDFVSEVLSLFFE---------DCVKLISNMARALDTTGTVDFS 75
           +D+QF  LK+L+ D +P   SE  S +F+            +L+  M   LD   +    
Sbjct: 219 IDEQFKRLKELRPD-TPLMCSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNISFSL- 276

Query: 76  QVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALKTKLQD 135
                +     S    G          F   C + +Y+  +    +V  +Y  ++  L +
Sbjct: 277 ----YMTHGGTSFGHWGGANFPN----FSPTCTSYDYDAPINESGKVTPKYLEVRNLLGN 328

Query: 136 MFNLEKQIIQAGGIVPQVDI 155
                + + +    +P + I
Sbjct: 329 YLPEGETLPEIPDSIPTIAI 348


>2BQ8-X nrPDB
          Length = 304

 Score = 27.7 bits (60), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 18/50 (36%)

Query: 8   LQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVK 57
           L +Q R    +     +L      L+ LQD+    +V      F +   +
Sbjct: 199 LVKQLRPLLATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKR 248


>1CCW-B nrPDB
          Length = 483

 Score = 26.9 bits (58), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 5/48 (10%)

Query: 23  GFLDDQFTELKKLQDDGSPDFVSEVLSLF-----FEDCVKLISNMARA 65
             LD+    L+ LQD+G  DF+   +  +     +++C   I    +A
Sbjct: 70  ALLDEHIELLRYLQDEGGADFLPSTIDAYTRQNRYDECENGIKESEKA 117


>4C9B-B nrPDB
          Length = 291

 Score = 26.5 bits (57), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 1   MDALIAQLQRQFRDYTISLYQQGFL--DDQFTELKKLQDDGSPDFVSEVLSL---FFEDC 55
           ++ + A  +  F+D+ I L     +  DDQFT +  L+DD +P+ V  V  +   F E+ 
Sbjct: 221 IEVMFAVRKDGFKDHPIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENE 280

Query: 56  VK 57
            K
Sbjct: 281 EK 282


>2JS9-A nrPDB
          Length = 99

 Score = 26.5 bits (57), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 25  LDDQFTELKKLQDDGSPDFVSEVLSLFFE-DCVKLISNMARALDTTGTVDFSQVGASVHQ 83
           L  Q  EL   + +GS D  + V+   F+ +C KL   +            S+V   +H+
Sbjct: 22  LSCQMCELVVKKYEGSADKDANVIKKDFDAECKKLFHTIPFGTRECDHYVNSKVDPIIHE 81

Query: 84  LKGSSSSVGAKRVKTLCVSFKEC 106
           L+G ++       K +C    EC
Sbjct: 82  LEGGTAP------KDVCTKLNEC 98


>1SR2-A nrPDB
          Length = 116

 Score = 26.1 bits (56), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%)

Query: 56  VKLISNMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGC 115
             +  ++ R      T DF+ +  + H+LKG  + +     K LC + +     K+  G 
Sbjct: 42  DTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGI 101

Query: 116 VRCLQQVD 123
            + +  +D
Sbjct: 102 EKYISDID 109


>5UQ6-A nrPDB
          Length = 313

 Score = 25.7 bits (55), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 19/55 (34%)

Query: 8   LQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNM 62
           L +Q      +     +L      L+ LQD+    FV      F +   K +  +
Sbjct: 201 LVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKV 255


>4K87-A nrPDB
          Length = 535

 Score = 25.7 bits (55), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)

Query: 75  SQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCV 116
            +  A    L+  + S+GA   K+LC+ FK  CE +    CV
Sbjct: 481 KKTTARDQDLEPGAPSMGA---KSLCIPFKPLCELQPGAKCV 519


>3A2K-A nrPDB
          Length = 464

 Score = 25.7 bits (55), Expect = 9.0,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 77  VGASV-HQLKGSSSSVGAKRVKTLCVSFKECCEAKNYE 113
           + A V H  +G  S    + VK  CV  +  CE    +
Sbjct: 50  IAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQID 87


>3DZU-A nrPDB
          Length = 467

 Score = 25.7 bits (55), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 78  GASVHQLKGSSSSVGA--KRVKTLCVS-FKECCEAKNYEGCVRCLQQVDIEYKALKTKLQ 134
           G  VH+    S+ VGA   RV T  VS  ++    K   GC+R +   + + K L    +
Sbjct: 334 GLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAE 393


>4OC7-A nrPDB
          Length = 254

 Score = 25.7 bits (55), Expect = 9.3,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 78  GASVHQLKGSSSSVGA--KRVKTLCVS-FKECCEAKNYEGCVRCLQQVDIEYKALKTKLQ 134
           G  VH+    S+ VGA   RV T  VS  ++    K   GC+R +   + + K L    +
Sbjct: 121 GLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAE 180


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.317    0.138    0.380 

Lambda     K      H
   0.267   0.0423    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,854,893
Number of Sequences: 36641
Number of extensions: 212344
Number of successful extensions: 626
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 587
Number of HSP's gapped (non-prelim): 46
length of query: 156
length of database: 10,336,785
effective HSP length: 89
effective length of query: 67
effective length of database: 7,075,736
effective search space: 474074312
effective search space used: 474074312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.7 bits)