BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9Y7M4 (93 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4EMG-A nrPDB 187 8e-49 3JCR-3 nrPDB 114 8e-27 6ASO-C nrPDB 79 5e-16 1TH7-A nrPDB 60 2e-10 1JBM-A nrPDB 54 1e-08 3PGG-A nrPDB 50 2e-07 3JB9-G nrPDB 44 2e-05 5MQF-a nrPDB 42 4e-05 1I8F-A nrPDB 42 4e-05 3SWN-C nrPDB 42 5e-05 6J6Q-g nrPDB 42 6e-05 5GM6-g nrPDB 42 6e-05 4M77-E nrPDB 40 2e-04 6QX9-67 nrPDB 40 3e-04 3SWN-A nrPDB 40 3e-04 4EMK-A nrPDB 40 3e-04 4XQ3-A nrPDB 39 5e-04 5MKL-A1 nrPDB 39 6e-04 3JB9-J nrPDB 37 0.001 6AH0-t nrPDB 34 0.011 5LJ3-g nrPDB 34 0.013 4C8Q-A nrPDB 33 0.035 6IQV-A nrPDB 32 0.051 6ASO-G nrPDB 32 0.061 4M75-A nrPDB 32 0.067 6QW6-4e nrPDB 31 0.12 6QX9-62 nrPDB 30 0.22 6QDV-e nrPDB 30 0.25 6QX9-66 nrPDB 29 0.44 3LCB-A nrPDB 28 0.75 6QX9-1b nrPDB 28 0.83 3JB9-H nrPDB 27 1.4 5GMK-i nrPDB 27 2.5 3JB9-E nrPDB 27 2.5 5Z58-f nrPDB 26 3.1 6QDV-f nrPDB 26 3.2 5LQW-b nrPDB 25 5.6 5N8X-A nrPDB 25 6.7 6AN0-A nrPDB 25 7.0 >4EMG-A nrPDB Length = 93 Score = 187 bits (475), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 93/93 (100%), Positives = 93/93 (100%) Query: 1 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE Sbjct: 1 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 Query: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN 93 ETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN Sbjct: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN 93 >3JCR-3 nrPDB Length = 102 Score = 114 bits (286), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 52/90 (57%), Positives = 69/90 (76%) Query: 2 ESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEE 61 ++ V EPLDL+RLSLDE +YVK+R DREL GRLHAYD+HLNM+LGD EE VT + +E Sbjct: 9 QTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDE 68 Query: 62 TDKDKALKTIRKHYEMLFVRGDSVILIAPP 91 ++ K+ +++ MLFVRGD V+L+APP Sbjct: 69 ETYEEIYKSTKRNIPMLFVRGDGVVLVAPP 98 >6ASO-C nrPDB Length = 97 Score = 79.0 bits (193), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 6/82 (7%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PLDL++L+LDE VY+KLRG R L G L A+D H N+VL DA E + ++EE L Sbjct: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEE------LS 57 Query: 70 TIRKHYEMLFVRGDSVILIAPP 91 + EM+F+RGD+V LI+ P Sbjct: 58 ESERRCEMVFIRGDTVTLISTP 79 >1TH7-A nrPDB Length = 81 Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 13/74 (17%) Query: 17 SLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYE 76 SL+ +V VKL+G++E+ G L +YD+H+N+VL D+EEI + K L TI Sbjct: 17 SLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEI------QSDGSGKKLGTI----- 65 Query: 77 MLFVRGDSVILIAP 90 +RGD+VILI+P Sbjct: 66 --VIRGDNVILISP 77 >1JBM-A nrPDB Length = 86 Score = 53.9 bits (128), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 13/83 (15%) Query: 7 VAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 V PLD + SL+ V +KL+GDRE G L ++D H+N+VL DAEE+ E+ + + Sbjct: 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEEL------EDGEVTR 64 Query: 67 ALKTIRKHYEMLFVRGDSVILIA 89 L T+ +RGD+++ I+ Sbjct: 65 RLGTV-------LIRGDNIVYIS 80 >3PGG-A nrPDB Length = 121 Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEE-TDKDKAL 68 PL L+ + +YV ++GD+E +G L +DE++NMVL D +E D+E+ + +K L Sbjct: 29 PLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEEDISGGNKKL 88 Query: 69 KTIR-KHYEMLFVRGDSVILIAP 90 K + E + + G++V ++ P Sbjct: 89 KRVMVNRLETILLSGNNVAMLVP 111 >3JB9-G nrPDB Length = 115 Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Query: 1 MESAQAVAEPLDLVRLSLD--EIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFD 58 +E + A PL +++ ++ + V + R +++L R+ A+D H NMVL + +E+ T + Sbjct: 20 LEEYEFSAGPLSVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWT--E 77 Query: 59 DEETDKDKALKTIRK--HYEMLFVRGDSVILI 88 + T K K I K +F+RGD V+L+ Sbjct: 78 KKRTASGKKGKAINKDRFISKMFLRGDGVVLV 109 >5MQF-a nrPDB Length = 118 Score = 42.4 bits (98), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Query: 10 PLDLVRLSL--DEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKA 67 PL ++ S+ + V + R +++L GR+ A+D H NMVL + +E+ T K K+ Sbjct: 28 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKS 87 Query: 68 LKTIRKHY-EMLFVRGDSVILI 88 + Y +F+RGDSVI++ Sbjct: 88 KPVNKDRYISKMFLRGDSVIVV 109 >1I8F-A nrPDB Length = 81 Score = 42.4 bits (98), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 14/74 (18%) Query: 17 SLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYE 76 S+ + V VKLR E+ G L ++D+H+N++L DAEEI+ + K Sbjct: 19 SIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIID-------------GNVYKRGT 65 Query: 77 MLFVRGDSVILIAP 90 M+ VRG++V+ I+P Sbjct: 66 MV-VRGENVLFISP 78 >3SWN-C nrPDB Length = 117 Score = 42.4 bits (98), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 12/93 (12%) Query: 3 SAQAVAEP-----LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIF 57 S+Q P LDL R D+ + G R++ G L +D+ +N+VL D EE + Sbjct: 17 SSQPTERPRKESILDLSRYQ-DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNP 75 Query: 58 DDEETDKDKALKTIRKHYEMLFVRGDSVILIAP 90 +D K IRK ++ VRG +++LIAP Sbjct: 76 ED-----GKLTGAIRK-LGLVVVRGTTLVLIAP 102 >6J6Q-g nrPDB Length = 110 Score = 42.0 bits (97), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%) Query: 22 VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVR 81 V + LR + ++ R+ A+D H NMVL + +E+ T K K + + LF+R Sbjct: 44 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWT------EKKGKNVINRERFISKLFLR 97 Query: 82 GDSVILI 88 GDSVI++ Sbjct: 98 GDSVIVV 104 >5GM6-g nrPDB Length = 94 Score = 42.0 bits (97), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%) Query: 22 VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVR 81 V + LR + ++ R+ A+D H NMVL + +E+ T K K + + LF+R Sbjct: 30 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWT------EKKGKNVINRERFISKLFLR 83 Query: 82 GDSVILI 88 GDSVI++ Sbjct: 84 GDSVIVV 90 >4M77-E nrPDB Length = 93 Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/81 (23%), Positives = 48/81 (59%), Gaps = 5/81 (6%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL+++ ++++ V + L+ +RE G L +D+ +N++L DA E + +DE + + Sbjct: 8 PLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRN-----E 62 Query: 70 TIRKHYEMLFVRGDSVILIAP 90 + +H+ + + G+++ ++ P Sbjct: 63 KVMQHHGRMLLSGNNIAILVP 83 >6QX9-67 nrPDB Length = 103 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKT 70 LDL + +D+ + VK +G RE +G L +D LN+VL E + DD+ L Sbjct: 13 LDLSKY-IDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY-----KLTE 66 Query: 71 IRKHYEMLFVRGDSVILIAP 90 + ++ RG SV+LI P Sbjct: 67 DTRQLGLVVCRGTSVVLICP 86 >3SWN-A nrPDB Length = 82 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 12/81 (14%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL+L+ + ++V ++ +RE G L +D+++N+VL D T+ D Sbjct: 9 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDV-----------TEYDTVTG 57 Query: 70 TIRKHYEMLFVRGDSVILIAP 90 KH EML G+ + ++ P Sbjct: 58 VTEKHSEMLL-NGNGMCMLIP 77 >4EMK-A nrPDB Length = 94 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 12/81 (14%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL+L+ + ++V ++ +RE G L +D+++N+VL D T+ D Sbjct: 21 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDV-----------TEYDTVTG 69 Query: 70 TIRKHYEMLFVRGDSVILIAP 90 KH EML G+ + ++ P Sbjct: 70 VTEKHSEMLL-NGNGMCMLIP 89 >4XQ3-A nrPDB Length = 91 Score = 38.9 bits (89), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 1 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 M+ V PL +R +++ IV VKL+ E G+L D +N+VL D EI E Sbjct: 3 MDMQAKVENPLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEI-----RE 57 Query: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIA 89 T + A Y + +RG +++ I+ Sbjct: 58 GTSEPVA------KYGRVLIRGSNILFIS 80 >5MKL-A1 nrPDB Length = 87 Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 11/83 (13%) Query: 7 VAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 + PL ++ +L++IV VKL+ E GRL D +N+VL D E E D Sbjct: 5 IENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEY------REGTSDP 58 Query: 67 ALKTIRKHYEMLFVRGDSVILIA 89 K Y + +RG +++ I+ Sbjct: 59 VAK-----YGRVLIRGSNILFIS 76 >3JB9-J nrPDB Length = 77 Score = 37.4 bits (85), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 13/71 (18%) Query: 18 LDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEM 77 LD V+V+L G R++ G L YD LN+VL D+ E E+ D +K Sbjct: 13 LDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE-------EKVDGEKV------KIGS 59 Query: 78 LFVRGDSVILI 88 + +RG+SVI+I Sbjct: 60 VAIRGNSVIMI 70 >6AH0-t nrPDB Length = 91 Score = 34.3 bits (77), Expect = 0.011, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 PL+LV + +++ ++ D+E+ G L +D+ +NMVL D E Sbjct: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE 56 >5LJ3-g nrPDB Length = 77 Score = 34.3 bits (77), Expect = 0.013, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 10/69 (14%) Query: 18 LDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEM 77 +D+ + + + G R++ G L YD LN+VL DA EI +D + L+T+ Sbjct: 11 MDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEING--EDPANNHQLGLQTV------ 62 Query: 78 LFVRGDSVI 86 +RG+S+I Sbjct: 63 --IRGNSII 69 >4C8Q-A nrPDB Length = 101 Score = 32.7 bits (73), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 8/73 (10%) Query: 17 SLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYE 76 S+D ++V LR R L G L +D++ N++L D E I+ EE K + Sbjct: 5 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVE--RIYFSEEN------KYAEEDRG 56 Query: 77 MLFVRGDSVILIA 89 + +RG++V+++ Sbjct: 57 IFMIRGENVVMLG 69 >6IQV-A nrPDB Length = 340 Score = 32.3 bits (72), Expect = 0.051, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 31 ELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYE 76 ELNG+L + + + +V G E+V I D + T D+ I+KH E Sbjct: 228 ELNGKLQGHAQRVGVVDGSLTELVAILDKKVT-ADEVNAAIKKHTE 272 >6ASO-G nrPDB Length = 115 Score = 32.0 bits (71), Expect = 0.061, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 LDL + D + VKL G + + G L YD+ +N+VL D E ++ DDE Sbjct: 28 LDLAKYK-DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDE 76 >4M75-A nrPDB Length = 144 Score = 32.0 bits (71), Expect = 0.067, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 10/74 (13%) Query: 17 SLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDA-EEIVTIFDDEETDKDKALKTIRKHY 75 S+D ++V LR R L G L +D++ N++L D E I +++ ++D+ + Sbjct: 21 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGI------- 73 Query: 76 EMLFVRGDSVILIA 89 +RG++V+++ Sbjct: 74 --FMIRGENVVMLG 85 >6QW6-4e nrPDB Length = 92 Score = 31.2 bits (69), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 16/93 (17%) Query: 5 QAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHA----YDEHLNMVLGDAEEIVTIFDDE 60 + + +P++L+ L +++ ++N R+ +DE++N+VL DAEEI Sbjct: 12 KVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI------- 64 Query: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN 93 K K+ RK + ++GD++ L+ N Sbjct: 65 -HSKTKS----RKQLGRIMLKGDNITLLQSVSN 92 >6QX9-62 nrPDB Length = 95 Score = 30.0 bits (66), Expect = 0.22, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Query: 22 VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVR 81 V V+L+ D + G LH+ D++LN+ L D +++ D E+ ++K F+R Sbjct: 15 VVVELKNDLSICGTLHSVDQYLNIKLTD----ISVTDPEKYPHMLSVKNC-------FIR 63 Query: 82 GDSVILIAPP 91 G V + P Sbjct: 64 GSVVRYVQLP 73 >6QDV-e nrPDB Length = 81 Score = 30.0 bits (66), Expect = 0.25, Method: Compositional matrix adjust. Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 16/90 (17%) Query: 5 QAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHA----YDEHLNMVLGDAEEIVTIFDDE 60 + + +P++L+ L +++ ++N R+ +DE++N+VL DAEEI Sbjct: 2 KVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI------- 54 Query: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIAP 90 K K+ RK + ++GD++ L+ Sbjct: 55 -HSKTKS----RKQLGRIMLKGDNITLLQS 79 >6QX9-66 nrPDB Length = 80 Score = 29.3 bits (64), Expect = 0.44, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 13/83 (15%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 P D ++ + V VKL + G L D ++N+ L EE V Sbjct: 8 PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVN-------------G 54 Query: 70 TIRKHYEMLFVRGDSVILIAPPR 92 ++ Y F+RG++V+ I+ + Sbjct: 55 QLKNKYGDAFIRGNNVLYISTQK 77 >3LCB-A nrPDB Length = 578 Score = 28.5 bits (62), Expect = 0.75, Method: Compositional matrix adjust. Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 4/47 (8%) Query: 32 LNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEML 78 + R+H YD H+ +V+ E++ I + + TD + L+ +++HY L Sbjct: 47 MKNRIHLYDHHVGLVV---EQLRCITNGQSTDAEFLLR-VKEHYTRL 89 >6QX9-1b nrPDB Length = 240 Score = 28.1 bits (61), Expect = 0.83, Method: Compositional matrix adjust. Identities = 16/72 (22%), Positives = 39/72 (54%), Gaps = 7/72 (9%) Query: 26 LRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVRGDSV 85 L+ R G A+D+H+N++L D +E I + + +A + ++ ++ +RG+++ Sbjct: 21 LQDGRIFIGTFKAFDKHMNLILCDCDEFRKI---KPKNSKQAEREEKRVLGLVLLRGENL 77 Query: 86 ILIA----PPRN 93 + + PP++ Sbjct: 78 VSMTVEGPPPKD 89 >3JB9-H nrPDB Length = 84 Score = 27.3 bits (59), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 13/67 (19%) Query: 22 VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVR 81 +++ + D L G++ +DE +N+VL DA ++ D + +K + + ++ Sbjct: 28 IWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQV-----DAKNNK--------RELGRILLK 74 Query: 82 GDSVILI 88 GD++ LI Sbjct: 75 GDNITLI 81 >5GMK-i nrPDB Length = 94 Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust. Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 32 LNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFVRGDSVILIA 89 + G++ +DE +N+V+ +A EI D + D +K + + ++GD++ LI Sbjct: 39 IKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGK-----ILLKGDNITLIT 91 >3JB9-E nrPDB Length = 147 Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 18 LDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 L+ + V + R G+L A+D +N+VL D +E Sbjct: 10 LNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQE 44 >5Z58-f nrPDB Length = 86 Score = 26.2 bits (56), Expect = 3.1, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 19/33 (57%) Query: 22 VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIV 54 V VKL+ E G L + D ++NM L + EE + Sbjct: 19 VMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYI 51 >6QDV-f nrPDB Length = 72 Score = 26.2 bits (56), Expect = 3.2, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 19/33 (57%) Query: 22 VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIV 54 V VKL+ E G L + D ++NM L + EE + Sbjct: 16 VMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYI 48 >5LQW-b nrPDB Length = 196 Score = 25.4 bits (54), Expect = 5.6, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 9/37 (24%) Query: 16 LSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 L+ D VY+ G+L A+D+H+N+VL + E Sbjct: 23 LTQDGRVYI---------GQLMAFDKHMNLVLNECIE 50 >5N8X-A nrPDB Length = 481 Score = 25.4 bits (54), Expect = 6.7, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Query: 18 LDEIVYVKLRGDRELNGRLHA--------YDEHLNMVLGDAEEIVTIFD 58 LDE+++ K +GD +++ A Y L+ VLG A ++I++ Sbjct: 52 LDEVIFSKHKGDTKMSAEDKALFRRCAADYASRLHSVLGTANAPLSIYE 100 >6AN0-A nrPDB Length = 447 Score = 25.0 bits (53), Expect = 7.0, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 19/28 (67%) Query: 53 IVTIFDDEETDKDKALKTIRKHYEMLFV 80 ++T+F+D + +KDKAL K ++ ++ Sbjct: 38 VLTVFEDIKNEKDKALINYTKKFDKAYL 65 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4EMG-A nrPDB 116 3e-27 3JCR-3 nrPDB 101 6e-23 6ASO-C nrPDB 87 1e-18 3PGG-A nrPDB 85 7e-18 3JB9-G nrPDB 83 2e-17 4M77-E nrPDB 79 4e-16 1JBM-A nrPDB 74 1e-14 6QX9-67 nrPDB 74 2e-14 5MQF-a nrPDB 73 3e-14 3SWN-A nrPDB 72 6e-14 4XQ3-A nrPDB 72 6e-14 4EMK-A nrPDB 72 7e-14 3SWN-C nrPDB 71 9e-14 5MKL-A1 nrPDB 71 1e-13 5GM6-g nrPDB 67 2e-12 1TH7-A nrPDB 67 2e-12 1I8F-A nrPDB 66 3e-12 6J6Q-g nrPDB 66 3e-12 3JB9-J nrPDB 55 1e-08 Sequences not found previously or not previously below threshold: 6AH0-t nrPDB 67 2e-12 6ASO-G nrPDB 56 4e-09 6AH0-d nrPDB 53 3e-08 6QX9-1b nrPDB 53 3e-08 6QX9-66 nrPDB 52 5e-08 4M75-A nrPDB 52 5e-08 3JB9-E nrPDB 51 1e-07 4C8Q-A nrPDB 50 2e-07 3SWN-B nrPDB 46 5e-06 5ZWM-s nrPDB 45 7e-06 6AH0-z nrPDB 45 8e-06 4M75-G nrPDB 45 9e-06 5LJ3-g nrPDB 45 9e-06 6QDV-f nrPDB 44 1e-05 5Z58-f nrPDB 44 1e-05 4C8Q-D nrPDB 44 2e-05 6ASO-D nrPDB 43 3e-05 3JB9-I nrPDB 42 7e-05 6QW6-4e nrPDB 42 7e-05 5LQW-b nrPDB 42 9e-05 3JB9-H nrPDB 42 9e-05 5GMK-i nrPDB 41 9e-05 6QDV-e nrPDB 41 1e-04 1LJO-A nrPDB 41 1e-04 4EMH-A nrPDB 40 3e-04 1N9R-A nrPDB 39 3e-04 5VSU-F nrPDB 39 6e-04 6QW6-64 nrPDB 37 0.001 4C8Q-B nrPDB 37 0.002 5VSU-B nrPDB 36 0.003 4N0A-C nrPDB 36 0.004 6QX9-62 nrPDB 32 0.069 1M5Q-A nrPDB 32 0.076 6BK8-g nrPDB 32 0.088 5GMK-m nrPDB 31 0.14 4K87-A nrPDB 27 2.7 6ER0-A nrPDB 26 4.1 >4EMG-A nrPDB Length = 93 Score = 116 bits (290), Expect = 3e-27, Method: Composition-based stats. Identities = 93/93 (100%), Positives = 93/93 (100%) Query: 1 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE Sbjct: 1 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 Query: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN 93 ETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN Sbjct: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIAPPRN 93 >3JCR-3 nrPDB Length = 102 Score = 101 bits (252), Expect = 6e-23, Method: Composition-based stats. Identities = 52/90 (57%), Positives = 69/90 (76%) Query: 2 ESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEE 61 ++ V EPLDL+RLSLDE +YVK+R DREL GRLHAYD+HLNM+LGD EE VT + +E Sbjct: 9 QTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDE 68 Query: 62 TDKDKALKTIRKHYEMLFVRGDSVILIAPP 91 ++ K+ +++ MLFVRGD V+L+APP Sbjct: 69 ETYEEIYKSTKRNIPMLFVRGDGVVLVAPP 98 >6ASO-C nrPDB Length = 97 Score = 87.5 bits (215), Expect = 1e-18, Method: Composition-based stats. Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 6/85 (7%) Query: 7 VAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 + PLDL++L+LDE VY+KLRG R L G L A+D H N+VL DA E + ++EE Sbjct: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEE----- 55 Query: 67 ALKTIRKHYEMLFVRGDSVILIAPP 91 L + EM+F+RGD+V LI+ P Sbjct: 56 -LSESERRCEMVFIRGDTVTLISTP 79 >3PGG-A nrPDB Length = 121 Score = 84.8 bits (208), Expect = 7e-18, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEE-TDKDKAL 68 PL L+ + +YV ++GD+E +G L +DE++NMVL D +E D+E+ + +K L Sbjct: 29 PLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEEDISGGNKKL 88 Query: 69 KTIR-KHYEMLFVRGDSVILIAP 90 K + E + + G++V ++ P Sbjct: 89 KRVMVNRLETILLSGNNVAMLVP 111 >3JB9-G nrPDB Length = 115 Score = 83.2 bits (204), Expect = 2e-17, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 1 MESAQAVAEPLDLVRLSLDE--IVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFD 58 +E + A PL +++ ++ V + R +++L R+ A+D H NMVL + +E+ T Sbjct: 20 LEEYEFSAGPLSVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWTEKK 79 Query: 59 DEETDKDKALKTIRKHYEMLFVRGDSVILIA 89 + K + +F+RGD V+L+ Sbjct: 80 RTASGKKGKAINKDRFISKMFLRGDGVVLVV 110 >4M77-E nrPDB Length = 93 Score = 79.0 bits (193), Expect = 4e-16, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 48/81 (59%), Gaps = 5/81 (6%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL+++ ++++ V + L+ +RE G L +D+ +N++L DA E + +DE ++ Sbjct: 8 PLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNE----- 62 Query: 70 TIRKHYEMLFVRGDSVILIAP 90 + +H+ + + G+++ ++ P Sbjct: 63 KVMQHHGRMLLSGNNIAILVP 83 >1JBM-A nrPDB Length = 86 Score = 74.0 bits (180), Expect = 1e-14, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 13/83 (15%) Query: 7 VAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 V PLD + SL+ V +KL+GDRE G L ++D H+N+VL DAEE+ Sbjct: 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELED----------- 59 Query: 67 ALKTIRKHYEMLFVRGDSVILIA 89 + + + +RGD+++ I+ Sbjct: 60 --GEVTRRLGTVLIRGDNIVYIS 80 >6QX9-67 nrPDB Length = 103 Score = 73.6 bits (179), Expect = 2e-14, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%) Query: 2 ESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEE 61 + + LDL + +D+ + VK +G RE +G L +D LN+VL E + DD+ Sbjct: 4 KEKKKKESILDLSKY-IDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY 62 Query: 62 TDKDKALKTIRKHYEMLFVRGDSVILIAP 90 L + ++ RG SV+LI P Sbjct: 63 -----KLTEDTRQLGLVVCRGTSVVLICP 86 >5MQF-a nrPDB Length = 118 Score = 72.8 bits (177), Expect = 3e-14, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%) Query: 9 EPLDLVRLSL--DEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 PL ++ S+ + V + R +++L GR+ A+D H NMVL + +E+ T K K Sbjct: 27 GPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKK 86 Query: 67 ALKTIRKHY-EMLFVRGDSVILI 88 + + Y +F+RGDSVI++ Sbjct: 87 SKPVNKDRYISKMFLRGDSVIVV 109 >3SWN-A nrPDB Length = 82 Score = 72.1 bits (175), Expect = 6e-14, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 12/81 (14%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL+L+ + ++V ++ +RE G L +D+++N+VL D E D Sbjct: 9 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEY-----------DTVTG 57 Query: 70 TIRKHYEMLFVRGDSVILIAP 90 KH EM + G+ + ++ P Sbjct: 58 VTEKHSEM-LLNGNGMCMLIP 77 >4XQ3-A nrPDB Length = 91 Score = 71.7 bits (174), Expect = 6e-14, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 11/89 (12%) Query: 1 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 M+ V PL +R +++ IV VKL+ E G+L D +N+VL D EI Sbjct: 3 MDMQAKVENPLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEI------R 56 Query: 61 ETDKDKALKTIRKHYEMLFVRGDSVILIA 89 E + K Y + +RG +++ I+ Sbjct: 57 EGTSEPVAK-----YGRVLIRGSNILFIS 80 >4EMK-A nrPDB Length = 94 Score = 71.7 bits (174), Expect = 7e-14, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 12/81 (14%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL+L+ + ++V ++ +RE G L +D+++N+VL D E D Sbjct: 21 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEY-----------DTVTG 69 Query: 70 TIRKHYEMLFVRGDSVILIAP 90 KH EM + G+ + ++ P Sbjct: 70 VTEKHSEM-LLNGNGMCMLIP 89 >3SWN-C nrPDB Length = 117 Score = 71.3 bits (173), Expect = 9e-14, Method: Composition-based stats. Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 12/94 (12%) Query: 2 ESAQAVAEP-----LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTI 56 S+Q P LDL R D+ + G R++ G L +D+ +N+VL D EE + Sbjct: 16 NSSQPTERPRKESILDLSRYQ-DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRN 74 Query: 57 FDDEETDKDKALKTIRKHYEMLFVRGDSVILIAP 90 +D K I + ++ VRG +++LIAP Sbjct: 75 PED-----GKLTGAI-RKLGLVVVRGTTLVLIAP 102 >5MKL-A1 nrPDB Length = 87 Score = 71.3 bits (173), Expect = 1e-13, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 11/87 (12%) Query: 3 SAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEET 62 + PL ++ +L++IV VKL+ E GRL D +N+VL D E E Sbjct: 1 MQAKIENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEY------REG 54 Query: 63 DKDKALKTIRKHYEMLFVRGDSVILIA 89 D K Y + +RG +++ I+ Sbjct: 55 TSDPVAK-----YGRVLIRGSNILFIS 76 >5GM6-g nrPDB Length = 94 Score = 66.7 bits (161), Expect = 2e-12, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%) Query: 9 EPLDLVRLSLDEI--VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 P+ L+ ++ V + LR + ++ R+ A+D H NMVL + +E+ T K K Sbjct: 15 GPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWT------EKKGK 68 Query: 67 ALKTIRKHYEMLFVRGDSVILI 88 + + LF+RGDSVI++ Sbjct: 69 NVINRERFISKLFLRGDSVIVV 90 >1TH7-A nrPDB Length = 81 Score = 66.7 bits (161), Expect = 2e-12, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 13/79 (16%) Query: 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTI 71 ++ SL+ +V VKL+G++E+ G L +YD+H+N+VL D+EEI + Sbjct: 12 KVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSG------------ 59 Query: 72 RKHYEMLFVRGDSVILIAP 90 K + +RGD+VILI+P Sbjct: 60 -KKLGTIVIRGDNVILISP 77 >6AH0-t nrPDB Length = 91 Score = 66.7 bits (161), Expect = 2e-12, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 10/81 (12%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL+LV + +++ ++ D+E+ G L +D+ +NMVL D E + Sbjct: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE----------G 63 Query: 70 TIRKHYEMLFVRGDSVILIAP 90 + + + G+++ ++ P Sbjct: 64 RRITKLDQILLNGNNITMLVP 84 >1I8F-A nrPDB Length = 81 Score = 66.3 bits (160), Expect = 3e-12, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 14/77 (18%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRK 73 ++ S+ + V VKLR E+ G L ++D+H+N++L DAEEI+ + K Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIID-------------GNVYK 62 Query: 74 HYEMLFVRGDSVILIAP 90 + VRG++V+ I+P Sbjct: 63 R-GTMVVRGENVLFISP 78 >6J6Q-g nrPDB Length = 110 Score = 66.3 bits (160), Expect = 3e-12, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%) Query: 9 EPLDLVRLSLDEI--VYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 P+ L+ ++ V + LR + ++ R+ A+D H NMVL + +E+ T K K Sbjct: 29 GPMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWT------EKKGK 82 Query: 67 ALKTIRKHYEMLFVRGDSVILI 88 + + LF+RGDSVI++ Sbjct: 83 NVINRERFISKLFLRGDSVIVV 104 >6ASO-G nrPDB Length = 115 Score = 55.9 bits (133), Expect = 4e-09, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKT 70 LDL + D + VKL G + + G L YD+ +N+VL D E ++ DDE + + + Sbjct: 28 LDLAKYK-DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDE--NNTELISK 84 Query: 71 IRKHYEMLFVRGDSVILIA 89 + + +RG ++ ++ Sbjct: 85 NARKLGLTVIRGTILVSLS 103 >3JB9-J nrPDB Length = 77 Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 13/75 (17%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRK 73 ++ LD V+V+L G R++ G L YD LN+VL D+ E E+ D +K Sbjct: 9 LKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE-------EKVDGEKV------ 55 Query: 74 HYEMLFVRGDSVILI 88 + +RG+SVI+I Sbjct: 56 KIGSVAIRGNSVIMI 70 >6AH0-d nrPDB Length = 76 Score = 52.8 bits (125), Expect = 3e-08, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 13/75 (17%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRK 73 ++ +D+ + +KL G R + G L +D +N+V+ + E+ T + Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQ-------------QN 55 Query: 74 HYEMLFVRGDSVILI 88 + M+ +RG+S+I++ Sbjct: 56 NIGMVVIRGNSIIML 70 >6QX9-1b nrPDB Length = 240 Score = 52.8 bits (125), Expect = 3e-08, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Query: 16 LSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHY 75 +D + L+ R G A+D+H+N++L D +E I ++ K + Sbjct: 11 QHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRV---L 67 Query: 76 EMLFVRGDSVILIA----PPRN 93 ++ +RG++++ + PP++ Sbjct: 68 GLVLLRGENLVSMTVEGPPPKD 89 >6QX9-66 nrPDB Length = 80 Score = 52.4 bits (124), Expect = 5e-08, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 13/85 (15%) Query: 8 AEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKA 67 P D ++ + V VKL + G L D ++N+ L EE V Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVN------------ 53 Query: 68 LKTIRKHYEMLFVRGDSVILIAPPR 92 ++ Y F+RG++V+ I+ + Sbjct: 54 -GQLKNKYGDAFIRGNNVLYISTQK 77 >4M75-A nrPDB Length = 144 Score = 52.4 bits (124), Expect = 5e-08, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 41/88 (46%), Gaps = 10/88 (11%) Query: 1 MESAQAVAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 ++ + S+D ++V LR R L G L +D++ N++L D E + ++ Sbjct: 7 LDQYNFTTT--AAIVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEEN 64 Query: 61 ETDKDKALKTIRKHYEMLFVRGDSVILI 88 + ++ + +RG++V+++ Sbjct: 65 KYAEEDR--------GIFMIRGENVVML 84 >3JB9-E nrPDB Length = 147 Score = 51.3 bits (121), Expect = 1e-07, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 5/77 (6%) Query: 18 LDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEM 77 L+ + V + R G+L A+D +N+VL D +E + + + ++ + Sbjct: 10 LNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEY-RHIKKQNVPSNSVYEE-KRMLGL 67 Query: 78 LFVRGDSVILIA---PP 91 + +RG+ ++ ++ PP Sbjct: 68 VILRGEFIVSLSVQGPP 84 >4C8Q-A nrPDB Length = 101 Score = 49.7 bits (117), Expect = 2e-07, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 8/72 (11%) Query: 17 SLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYE 76 S+D ++V LR R L G L +D++ N++L D E + ++ + ++ Sbjct: 5 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDR--------G 56 Query: 77 MLFVRGDSVILI 88 + +RG++V+++ Sbjct: 57 IFMIRGENVVML 68 >3SWN-B nrPDB Length = 77 Score = 45.9 bits (107), Expect = 5e-06, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 13/80 (16%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 P + + + + V ++L + G L D ++N+ L EE V Sbjct: 7 PNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVN-------------G 53 Query: 70 TIRKHYEMLFVRGDSVILIA 89 Y F+RG++V+ ++ Sbjct: 54 KKTNVYGDAFIRGNNVLYVS 73 >5ZWM-s nrPDB Length = 187 Score = 45.1 bits (105), Expect = 7e-06, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL L+ + + + ++L+ + G L D +N+ L + E D ++ K Sbjct: 3 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 62 Query: 70 TIRKHYEMLFVRGDSVILI 88 + +++RG + I Sbjct: 63 AV--KLNEIYIRGTFIKFI 79 >6AH0-z nrPDB Length = 96 Score = 45.1 bits (105), Expect = 8e-06, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 9/77 (11%) Query: 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTI 71 + ++ V V R + G L +D+ +N++L ++ E V Sbjct: 3 SALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQ---------GVE 53 Query: 72 RKHYEMLFVRGDSVILI 88 + + VRGD+V +I Sbjct: 54 QVVLGLYIVRGDNVAVI 70 >4M75-G nrPDB Length = 122 Score = 44.7 bits (104), Expect = 9e-06, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL L+ + + + ++L+ + G L D +N+ L + E D ++ K Sbjct: 32 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 91 Query: 70 TIRKHYEMLFVRGDSVILI 88 + +++RG + I Sbjct: 92 AV--KLNEIYIRGTFIKFI 108 >5LJ3-g nrPDB Length = 77 Score = 44.7 bits (104), Expect = 9e-06, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRK 73 ++ +D+ + + + G R++ G L YD LN+VL DA EI Sbjct: 7 LKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQT----- 61 Query: 74 HYEMLFVRGDSVI 86 +RG+S+I Sbjct: 62 -----VIRGNSII 69 >6QDV-f nrPDB Length = 72 Score = 44.3 bits (103), Expect = 1e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 13/80 (16%) Query: 9 EPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKAL 68 P + + V VKL+ E G L + D ++NM L + EE + Sbjct: 3 NPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYID------------- 49 Query: 69 KTIRKHYEMLFVRGDSVILI 88 + H + +R ++V+ I Sbjct: 50 GALSGHLGEVLIRCNNVLYI 69 >5Z58-f nrPDB Length = 86 Score = 44.3 bits (103), Expect = 1e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 13/80 (16%) Query: 9 EPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKAL 68 P + + V VKL+ E G L + D ++NM L + EE + Sbjct: 6 NPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYID------------- 52 Query: 69 KTIRKHYEMLFVRGDSVILI 88 + H + +R ++V+ I Sbjct: 53 GALSGHLGEVLIRCNNVLYI 72 >4C8Q-D nrPDB Length = 114 Score = 43.6 bits (101), Expect = 2e-05, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL L+ + + + ++L+ + G L D +N+ L + E D ++ K Sbjct: 3 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 62 Query: 70 TIRKHYEMLFVRGDSVILI 88 + +++RG + I Sbjct: 63 AV--KLNEIYIRGTFIKFI 79 >6ASO-D nrPDB Length = 93 Score = 42.8 bits (99), Expect = 3e-05, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL L+ + + + ++L+ + G L D +N+ L + E D ++ K Sbjct: 3 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 62 Query: 70 TIRKHYEMLFVRGDSVILI 88 + +++RG + I Sbjct: 63 AV--KLNEIYIRGTFIKFI 79 >3JB9-I nrPDB Length = 78 Score = 41.6 bits (96), Expect = 7e-05, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 13/80 (16%) Query: 9 EPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKAL 68 P ++ + + V V+L+ +E G L + D ++N+ L +AEE+V Sbjct: 7 NPKPFLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEELVD------------- 53 Query: 69 KTIRKHYEMLFVRGDSVILI 88 + +R ++V+ + Sbjct: 54 GVKTGDLGEILIRCNNVLWV 73 >6QW6-4e nrPDB Length = 92 Score = 41.6 bits (96), Expect = 7e-05, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 12/73 (16%) Query: 21 IVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFV 80 V++ + + + G + +DE++N+VL DAEEI + RK + + Sbjct: 32 QVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI------------HSKTKSRKQLGRIML 79 Query: 81 RGDSVILIAPPRN 93 +GD++ L+ N Sbjct: 80 KGDNITLLQSVSN 92 >5LQW-b nrPDB Length = 196 Score = 41.6 bits (96), Expect = 9e-05, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 9/82 (10%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE---------IVTIFDDEETDK 64 + +D + V + R G+L A+D+H+N+VL + E + D + Sbjct: 12 LANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGT 71 Query: 65 DKALKTIRKHYEMLFVRGDSVI 86 +K ++ + +RG+ ++ Sbjct: 72 TLNIKVEKRVLGLTILRGEQIL 93 >3JB9-H nrPDB Length = 84 Score = 41.6 bits (96), Expect = 9e-05, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 13/77 (16%) Query: 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTI 71 L++ +++ + D L G++ +DE +N+VL DA ++ K Sbjct: 18 KLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQV-------------DAKNN 64 Query: 72 RKHYEMLFVRGDSVILI 88 ++ + ++GD++ LI Sbjct: 65 KRELGRILLKGDNITLI 81 >5GMK-i nrPDB Length = 94 Score = 41.3 bits (95), Expect = 9e-05, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 5/76 (6%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRK 73 ++ +++ + + G++ +DE +N+V+ +A EI D + D +K Sbjct: 21 LQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTP---- 76 Query: 74 HYEMLFVRGDSVILIA 89 + ++GD++ LI Sbjct: 77 -LGKILLKGDNITLIT 91 >6QDV-e nrPDB Length = 81 Score = 41.3 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 12/68 (17%) Query: 21 IVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYEMLFV 80 V++ + + + G + +DE++N+VL DAEEI + RK + + Sbjct: 22 QVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI------------HSKTKSRKQLGRIML 69 Query: 81 RGDSVILI 88 +GD++ L+ Sbjct: 70 KGDNITLL 77 >1LJO-A nrPDB Length = 77 Score = 40.9 bits (94), Expect = 1e-04, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 14/82 (17%) Query: 10 PLDLVRLSLDEIVYVKLRGDR-ELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKAL 68 P +V+ + +I+ V+++G+ +L G+L D+++N+ L +A E Sbjct: 6 PNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMEC-------------KG 52 Query: 69 KTIRKHYEMLFVRGDSVILIAP 90 + + + +RG++V+LI P Sbjct: 53 EEKVRSLGEIVLRGNNVVLIQP 74 >4EMH-A nrPDB Length = 105 Score = 39.7 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 12/79 (15%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL L+ + + V+L+ NG L D ++N+ L + + D Sbjct: 17 PLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDK---------- 66 Query: 70 TIRKHYEMLFVRGDSVILI 88 ++RG+++ + Sbjct: 67 --FFRLPECYIRGNNIKYL 83 >1N9R-A nrPDB Length = 93 Score = 39.3 bits (90), Expect = 3e-04, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 14/81 (17%) Query: 9 EPLDLVRLSLDEIVYVKLR-GDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKA 67 P ++ ++ V VKL+ E G L + D + N+ L +AEE Sbjct: 21 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEF-------------V 67 Query: 68 LKTIRKHYEMLFVRGDSVILI 88 +F+R ++V+ I Sbjct: 68 AGVSHGTLGEIFIRCNNVLYI 88 >5VSU-F nrPDB Length = 88 Score = 38.6 bits (88), Expect = 6e-04, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 9/78 (11%) Query: 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTI 71 + + + + V VKL +GRL + D +N+ L A E + K + Sbjct: 16 EFLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHY---------ESNNNKLL 66 Query: 72 RKHYEMLFVRGDSVILIA 89 K +F+RG V+ I+ Sbjct: 67 NKFNSDVFLRGTQVMYIS 84 >6QW6-64 nrPDB Length = 139 Score = 37.4 bits (85), Expect = 0.001, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 12/82 (14%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 PL L++ + + + V+L+ NG L + D +N+ L + D Sbjct: 3 PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDK---------- 52 Query: 70 TIRKHYEMLFVRGDSVILIAPP 91 ++RG ++ + P Sbjct: 53 --FWRMPECYIRGSTIKYLRIP 72 >4C8Q-B nrPDB Length = 105 Score = 36.6 bits (83), Expect = 0.002, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 11/82 (13%) Query: 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTI 71 + +D+ V V+L+ D E+ G L + D+ LN+ L + + K L ++ Sbjct: 15 SFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI-------SCTDEKKYPHLGSV 67 Query: 72 RKHYEMLFVRGDSVILIAPPRN 93 R +F+RG +V + +N Sbjct: 68 RN----IFIRGSTVRYVYLNKN 85 >5VSU-B nrPDB Length = 98 Score = 36.2 bits (82), Expect = 0.003, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 11/82 (13%) Query: 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTI 71 + +D+ V V+L+ D E+ G L + D+ LN+ L + + K L ++ Sbjct: 8 SFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI-------SCTDEKKYPHLGSV 60 Query: 72 RKHYEMLFVRGDSVILIAPPRN 93 R +F+RG +V + +N Sbjct: 61 RN----IFIRGSTVRYVYLNKN 78 >4N0A-C nrPDB Length = 109 Score = 35.9 bits (81), Expect = 0.004, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 11/82 (13%) Query: 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTI 71 + +D+ V V+L+ D E+ G L + D+ LN+ L + + K L ++ Sbjct: 19 SFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI-------SCTDEKKYPHLGSV 71 Query: 72 RKHYEMLFVRGDSVILIAPPRN 93 R +F+RG +V + +N Sbjct: 72 RN----IFIRGSTVRYVYLNKN 89 >6QX9-62 nrPDB Length = 95 Score = 32.0 bits (71), Expect = 0.069, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 21/33 (63%) Query: 18 LDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDA 50 + + V V+L+ D + G LH+ D++LN+ L D Sbjct: 11 VGKDVVVELKNDLSICGTLHSVDQYLNIKLTDI 43 >1M5Q-A nrPDB Length = 130 Score = 31.6 bits (70), Expect = 0.076, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 17/37 (45%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDA 50 + L V V L G LHA D LN+VL +A Sbjct: 5 LNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANA 41 >6BK8-g nrPDB Length = 101 Score = 31.6 bits (70), Expect = 0.088, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 13/82 (15%) Query: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 P+ L+ + IV ++L G+L ++ +N+ L D I T T Sbjct: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDV--IATEPQGAVT------- 57 Query: 70 TIRKHYEMLFVRGDSVILIAPP 91 H + +FVRG + I P Sbjct: 58 ----HMDQIFVRGSQIKFIVVP 75 >5GMK-m nrPDB Length = 146 Score = 30.9 bits (68), Expect = 0.14, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 23/52 (44%) Query: 14 VRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKD 65 ++ +E V ++L+ + G L + +N +L D + + + + + Sbjct: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSN 58 >4K87-A nrPDB Length = 535 Score = 26.6 bits (57), Expect = 2.7, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 5/57 (8%) Query: 37 HAYDEHLNMVLGDAEEIVTIFDDEETDKDKALKTIRKHYE-MLFVRGDSVILIAPPR 92 + + +V D + I +++ + + M V GD++ L+ PPR Sbjct: 269 QNFSKMFEIVFEDPK----IPGEKQFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPR 321 >6ER0-A nrPDB Length = 127 Score = 25.8 bits (55), Expect = 4.1, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 25/52 (48%) Query: 7 VAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFD 58 +E L+ + + + V V L DRE G L + D +V D +E + I + Sbjct: 66 SSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILN 117 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.130 0.324 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,005,320 Number of Sequences: 36641 Number of extensions: 91970 Number of successful extensions: 397 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 264 Number of HSP's gapped (non-prelim): 109 length of query: 93 length of database: 10,336,785 effective HSP length: 61 effective length of query: 32 effective length of database: 8,101,684 effective search space: 259253888 effective search space used: 259253888 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 52 (24.7 bits)