BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9Y3R4 (380 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2F11-A nrPDB 783 0.0 1EUR-A nrPDB 74 1e-13 1EUU-A nrPDB 74 1e-13 2VK6-A nrPDB 65 4e-11 4Q6K-A nrPDB 64 9e-11 4FJ6-A nrPDB 64 1e-10 4BBW-A nrPDB 60 1e-09 4M4V-A nrPDB 48 7e-06 5KKY-A nrPDB 47 2e-05 3B69-A nrPDB 35 0.038 2ISA-A nrPDB 34 0.12 4YZ2-A nrPDB 30 1.3 2OGJ-A nrPDB 30 1.4 4M2J-A nrPDB 29 2.6 6M7L-A nrPDB 29 4.3 4UOO-A nrPDB 28 7.7 >2F11-A nrPDB Length = 382 Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/380 (99%), Positives = 380/380 (100%) Query: 1 MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYD 60 MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYD Sbjct: 3 MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYD 62 Query: 61 APTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN 120 APTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN Sbjct: 63 APTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN 122 Query: 121 VTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYA 180 VTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQL+DRARSLVVPAYA Sbjct: 123 VTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLNDRARSLVVPAYA 182 Query: 181 YRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL 240 YRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL Sbjct: 183 YRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL 242 Query: 241 RARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTH 300 RARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTH Sbjct: 243 RARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTH 302 Query: 301 SWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYE 360 SWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYE Sbjct: 303 SWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYE 362 Query: 361 EIVFLMFTLKQAFPAEYLPQ 380 EIVFLMFTLKQAFPAEYLPQ Sbjct: 363 EIVFLMFTLKQAFPAEYLPQ 382 >1EUR-A nrPDB Length = 365 Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 97/344 (28%), Positives = 137/344 (39%), Gaps = 32/344 (9%) Query: 20 YRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARL 79 YRIPAL P LLA + R + D +L+R D W Q+VV+ + Sbjct: 25 YRIPALTVTP-DGDLLASYDGRPTGIDAPGPNSILQRRSTDG---GRTWGEQQVVSAGQT 80 Query: 80 DG--HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRA---NVTRLCQVTSTDHGR 134 +P L D +TGT+F F + Q + T NV TSTD G Sbjct: 81 TAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGL 140 Query: 135 TWSSPRDLTDAAIGPAYREWSTFAV-GPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPS 193 TWS D P +R S FA G G L+ A L+ Q Sbjct: 141 TWSHRTITADITPDPGWR--SRFAASGEGIQLRYGPHAGRLIQQYTIINAAGAFQ----- 193 Query: 194 AFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRA--RVQAQSTND 251 A S DHGRTW G V E + E+ G V LN+R R+ R A ST+ Sbjct: 194 AVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGR---VLLNSRDSARSGYRKVAVSTDG 250 Query: 252 GLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYL 311 G + + + L P P + +FP +G + A+ LL+++ R+ + Sbjct: 251 GHSYGPVTIDRDL--PDPTNNASIIRAFPDAPAGS-ARAKVLLFSNAASQTSRSQ--GTI 305 Query: 312 NPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYE 355 + W + GS +YS L ++ PDG+ +G LYE Sbjct: 306 RMSCDDGQTWPVSKVFQPGSMSYSTLTAL---PDGT--YGLLYE 344 >1EUU-A nrPDB Length = 605 Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 97/344 (28%), Positives = 137/344 (39%), Gaps = 32/344 (9%) Query: 20 YRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARL 79 YRIPAL P LLA + R + D +L+R D W Q+VV+ + Sbjct: 25 YRIPALTVTP-DGDLLASYDGRPTGIDAPGPNSILQRRSTDG---GRTWGEQQVVSAGQT 80 Query: 80 DG--HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRA---NVTRLCQVTSTDHGR 134 +P L D +TGT+F F + Q + T NV TSTD G Sbjct: 81 TAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGL 140 Query: 135 TWSSPRDLTDAAIGPAYREWSTFAV-GPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPS 193 TWS D P +R S FA G G L+ A L+ Q Sbjct: 141 TWSHRTITADITPDPGWR--SRFAASGEGIQLRYGPHAGRLIQQYTIINAAGAFQ----- 193 Query: 194 AFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRA--RVQAQSTND 251 A S DHGRTW G V E + E+ G V LN+R R+ R A ST+ Sbjct: 194 AVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGR---VLLNSRDSARSGYRKVAVSTDG 250 Query: 252 GLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYL 311 G + + + L P P + +FP +G + A+ LL+++ R+ + Sbjct: 251 GHSYGPVTIDRDL--PDPTNNASIIRAFPDAPAG-SARAKVLLFSNAASQTSRSQ--GTI 305 Query: 312 NPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYE 355 + W + GS +YS L ++ PDG+ +G LYE Sbjct: 306 RMSCDDGQTWPVSKVFQPGSMSYSTLTAL---PDGT--YGLLYE 344 >2VK6-A nrPDB Length = 452 Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 61/279 (21%) Query: 127 VTSTDHGRTWSSPRDLTDAAIGPAYREWSTF-AVGPGHCLQLHD---RARSLVVPAYAYR 182 V S D G+TWS P+++ ++W F + PG +Q+ + + R +VVP Y Sbjct: 192 VYSDDDGKTWSEPQNIN----FQVKKDWMKFLGIAPGRGIQIKNGEHKGR-IVVPVY--- 243 Query: 183 KLHPIQRPIPSAFCFLSHDHGRTWA------------RGHFVAQDTL--------ECQVA 222 + ++ S+ S D G+ W G + TL ECQV Sbjct: 244 --YTNEKGKQSSAVIYSDDSGKNWTIGESPNDNRKLENGKIINSKTLSDDAPQLTECQVV 301 Query: 223 EVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQES-QLVKKLVEPPPQGCQGSVISFPS 281 E+ G+ ++ N +L A S + G + E+ + ++EP CQ SVI++ Sbjct: 302 EMPNGQLKLFMRNLSGYLNI---ATSFDGGATWDETVEKDTNVLEPY---CQLSVINYSQ 355 Query: 282 PRSGPGSPAQWLLYTHPTHSWQRAD----------LGAYLNPRPPAPEAWSEPVLLAKGS 331 G + +++++P ++ R++ +G Y N P W L+ G Sbjct: 356 KVDGKDA----VIFSNP-NARSRSNGTVRIGLINQVGTYENGEPKYEFDWKYNKLVKPGY 410 Query: 332 CAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLK 370 AYS L + G G LYE EE+ ++ LK Sbjct: 411 YAYSCLTELSNGN-----IGLLYEGTPSEEMSYIEMNLK 444 >4Q6K-A nrPDB Length = 525 Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 18/178 (10%) Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYR 182 +L STD G+TWS P ++TD P+ W GPG + + D +LV P Sbjct: 295 QLVLSKSTDDGKTWSEPINITDQVKDPS---WYFLLQGPGRGITMQDG--TLVFPIQFID 349 Query: 183 KLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRA 242 +P+A S D G TW ++ +T E QVAEVE G V+ LN R + Sbjct: 350 STR-----VPNAGIMYSKDRGETWKIHNYARTNTTEAQVAEVEPG---VLMLNMRDNRGG 401 Query: 243 RVQAQSTND-GLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPT 299 +T D G + E +K ++ P C S+IS + + LL+++P Sbjct: 402 SRAVATTKDLGKTWTEHPSSRKALQEPV--CMASLISVKAADNTLNKDI--LLFSNPN 455 >4FJ6-A nrPDB Length = 523 Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/249 (26%), Positives = 100/249 (40%), Gaps = 31/249 (12%) Query: 16 GAHAYRIPALLYLPGQQSLLAFAEQRASKKD--EHAELIVLRRGDYDAPTHQVQWQAQEV 73 G+ A+RIP L+ L + + S D E ++ V R D W+ V Sbjct: 177 GSAAFRIPGLVTTNNGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQT-----WEPMRV 231 Query: 74 VAQAR-LDG-----HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVT----- 122 + DG + +P L D +T T+++ G E+ + +T Sbjct: 232 AMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETA 291 Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYR 182 +L V S D G+TWS P ++T P+ W GPG + + D +LV P Sbjct: 292 QLMLVKSEDDGKTWSEPINITSQVKDPS---WYFLLQGPGRGITMQDG--TLVFPIQFID 346 Query: 183 KLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRA 242 +P+A S D G+TW + +T E QVAEVE G V+ LN R + Sbjct: 347 ATR-----VPNAGIMYSKDRGKTWHLHNLARTNTTEAQVAEVEPG---VLMLNMRDNRGG 398 Query: 243 RVQAQSTND 251 +T D Sbjct: 399 SRAVATTKD 407 >4BBW-A nrPDB Length = 544 Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 21/198 (10%) Query: 86 NPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANV-----TRLCQVTSTDHGRTWSSPR 140 +P L D QT T+++ G ++ + + +L STD G+TWS P Sbjct: 272 DPSILVDTQTNTIWVVAAWTHGMGNQRAWWSSHPGMDLYQTAQLVMAKSTDDGKTWSKPI 331 Query: 141 DLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSH 200 ++T+ P+ W GPG + + D +LV P +P+A S Sbjct: 332 NITEQVKDPS---WYFLLQGPGRGITMSDG--TLVFPTQFIDSTR-----VPNAGIMYSK 381 Query: 201 DHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL-RARVQAQSTNDGLDFQESQ 259 D G+TW + +T E QV E E G V+ LN R + +R A + + G + E Sbjct: 382 DRGKTWKMHNMARTNTTEAQVVETEPG---VLMLNMRDNRGGSRAVAITKDLGKTWTEHP 438 Query: 260 LVKKLVEPPPQGCQGSVI 277 +K ++ P C S+I Sbjct: 439 SSRKALQEPV--CMASLI 454 >4M4V-A nrPDB Length = 422 Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/306 (24%), Positives = 118/306 (38%), Gaps = 51/306 (16%) Query: 16 GAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAEL-IVLRRGDYDAPTHQV--QWQ-AQ 71 G H++RIPA++ + +LAFAE R + ++ +V +R A W+ + Sbjct: 70 GFHSFRIPAVVRTTTGR-ILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEPLR 128 Query: 72 EVVAQARLDGHRSMNPCPLYDAQTGTLFLFFI------------AIPGQVTEQQQLQTRA 119 EVV NP P+ D T++LF +P ++ T Sbjct: 129 EVVGSG---AGTWGNPTPVVDDDN-TIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWE 184 Query: 120 NVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAY 179 L S D G TWS P DLT W+ AVGPG+ ++L LV+PA Sbjct: 185 GRLHLYLTESRDDGNTWSKPVDLTKELTPDG---WAWDAVGPGNGIRLT--TGELVIPAM 239 Query: 180 AYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSH 239 + I R P RTW+ + V+T + ++ + S Sbjct: 240 GR---NIIGRGAPG---------NRTWSVQRLSGAG---AEGTIVQTPDGKLYRNDRPSQ 284 Query: 240 LRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPT 299 R+ A+ T +G P P CQGSV+ + S +PA+ + + Sbjct: 285 KGYRMVARGTLEGF----GAFAPDAGLPDPA-CQGSVLRYNSD-----APARTIFLNSAS 334 Query: 300 HSWQRA 305 + +RA Sbjct: 335 GTSRRA 340 >5KKY-A nrPDB Length = 496 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 100/258 (38%), Gaps = 61/258 (23%) Query: 129 STDHGRTWSSPRDLTDAAIGPAYR-EWSTF-AVGPGHCLQLHD---RARSLVVPAYAYRK 183 S D G+TWS+P+D+T P + +W F VGPG + L + + R +++P Y Sbjct: 245 SDDDGKTWSAPQDIT-----PMVKADWMKFLGVGPGTGIVLRNGPHKGR-ILIPVYTTNN 298 Query: 184 LHPIQRPIPSAFCFLSHDHGRTWARGHFV--------------------AQDTLECQVAE 223 + + S + S DHG+TW G V AQ+T E V + Sbjct: 299 VSHLDGSQSSRVIY-SDDHGKTWHAGEAVNDNRQVDGQKIHSSTMNNRRAQNT-ESTVVQ 356 Query: 224 VETGEQRVVTLNARSHLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPR 283 + G+ ++ L+ A S + G+ +++ +K+ + Q S I Sbjct: 357 LNNGDVKLFMRGLTGDLQV---ATSKDGGVTWEKD--IKRYPQVKDVYVQMSAIHTMHEG 411 Query: 284 ------SGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDL 337 S G P + H + +L W + + KG AY+ L Sbjct: 412 KEYIILSNAGGPKRENGMVHLARVEENGEL------------TWLKHNPIQKGEFAYNSL 459 Query: 338 QSMGTGPDGSPLFGCLYE 355 Q +G G +G LYE Sbjct: 460 QELGNGE-----YGILYE 472 >3B69-A nrPDB Length = 648 Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust. Identities = 70/328 (21%), Positives = 123/328 (37%), Gaps = 40/328 (12%) Query: 2 ASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA 61 + +P + V + H++R+PAL+ + G +A A S + + + D D Sbjct: 30 SKVPFEKDGKVTERVVHSFRLPALVNVDGVMVAIADARYETSFDNSLIDTVAKYSVD-DG 88 Query: 62 PTHQVQWQAQEVVAQARLDG-HRSMNPCPLYDAQTGTLFLF---------FIAIPGQVTE 111 T W+ Q + +R R ++P + + L++ + G + Sbjct: 89 ET----WETQIAIKNSRASSVSRVVDPTVI--VKGNKLYVLVGSYNSSRSYWTSHGDARD 142 Query: 112 QQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREW---STFAVGPGHCLQLH 168 L VT+ W SP L + PA E + F G G + Sbjct: 143 WDILLAVGEVTKSTAGGKITASIKWGSPVSLKE--FFPAEMEGMHTNQFLGGAGVAIVAS 200 Query: 169 DRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGE 228 + +LV P K + I F S D G+TW G + C E Sbjct: 201 NG--NLVYPVQVTNKKKQVFSKI-----FYSEDEGKTWKFGK--GRSAFGCSEPVALEWE 251 Query: 229 QRVVTLNARSHLRARVQAQSTNDGLDFQES-QLVKKLVEPPPQGCQ-GSVISFPSPRSGP 286 +++ +N R R R+ +S++ G + E+ + ++ P P+ Q GS SF + Sbjct: 252 GKLI-INTRVDYRRRLVYESSDMGNTWLEAVGTLSRVWGPSPKSNQPGSQSSFTAVTI-- 308 Query: 287 GSPAQWLLYTHPTH---SWQRADLGAYL 311 + +L+THP + W R L +L Sbjct: 309 -EGMRVMLFTHPLNFKGRWLRDRLNLWL 335 >2ISA-A nrPDB Length = 483 Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%) Query: 176 VPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLN 235 +PA YR +H F F++ D+ R W + HFV+Q ++ +++ E GE +V + Sbjct: 183 IPA-TYRHMHGFGS---HTFSFINSDNERYWVKFHFVSQQGIK-NLSDAEAGE--LVGND 235 Query: 236 ARSHLRARVQAQSTND 251 SH R + + D Sbjct: 236 RESHQRDLLDSIDNQD 251 >4YZ2-A nrPDB Length = 677 Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 27/161 (16%) Query: 124 LCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFA--VGPGHCLQLHDRARSLVVPAYAY 181 + ++S DHG +WS+P L P + A +GPG + R +++P+Y Sbjct: 440 IAYISSNDHGESWSAPTLL------PPIMGLNRNAPYLGPGRGIIESSTGR-ILIPSYTG 492 Query: 182 RKLHPIQRPIPSAFCFLSHDHGRTWARGHFV---AQDTLECQVAEVETGEQRVVTLNARS 238 ++ SAF + S D+G +W + V + + E Q E+ G V+ R+ Sbjct: 493 KE---------SAFIY-SDDNGASW-KVKVVPLPSSWSAEAQFVELSPG---VIQAYMRT 538 Query: 239 HLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISF 279 + S + G + + + K V P G Q S+I++ Sbjct: 539 NNGKIAYLTSKDAGTTWSAPEYL-KFVSNPSYGTQLSIINY 578 >2OGJ-A nrPDB Length = 417 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 50/134 (37%), Gaps = 17/134 (12%) Query: 79 LDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHG-RTWS 137 L GH SMN P++D T L + +P + + + A+V RL D G R Sbjct: 292 LHGH-SMN-FPVWDLATTMSKLLSVDMPFENVVEAVTRNPASVIRLDMENRLDVGQRADF 349 Query: 138 SPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPI--QRPIPSAF 195 + DL DA + R + L P YA I R IP A Sbjct: 350 TVFDLVDADLEATDSNGDV------------SRLKRLFEPRYAVIGAEAIAASRYIPRAR 397 Query: 196 CFLSHDHGRTWARG 209 + H HG +W G Sbjct: 398 KLVRHSHGYSWREG 411 >4M2J-A nrPDB Length = 406 Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Query: 149 PAYREWSTFAVGPGH----CLQLHDRARSLVVPAYAYRKLH 185 P +RE A GP CL+L +R R+L+VP A+ H Sbjct: 335 PVFRELERAAAGPQEVERFCLELLERHRTLLVPGTAFGAPH 375 >6M7L-A nrPDB Length = 404 Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Query: 161 PGHCLQL----HDRARSLVVPAYAYRKLHPIQ 188 PG+ LQL H R R +V PAY+ R++ ++ Sbjct: 97 PGNLLQLDPPEHTRLRRMVAPAYSVRRMQALE 128 >4UOO-A nrPDB Length = 459 Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust. Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 28/91 (30%) Query: 2 ASLPVLQKESVFQSGAHAYRIPALLYLPGQQS--------------------------LL 35 A +L K+ A A R+P ++++PG Q L Sbjct: 298 AMTKILGKDYNTFENAQAQRVPLMIHVPGVQGGVQEQYGGQVDLLPTLLHLLGVDNKEYL 357 Query: 36 AFAEQRASKKDEHAELIVLRRGDYDAPTHQV 66 F SK +H +L+ R GDY PT+ + Sbjct: 358 QFGTDLLSK--DHKQLVPFRNGDYITPTYSM 386 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2F11-A nrPDB 584 e-167 1EUR-A nrPDB 324 3e-89 1EUU-A nrPDB 323 6e-89 4BBW-A nrPDB 317 6e-87 4FJ6-A nrPDB 316 1e-86 4Q6K-A nrPDB 308 2e-84 4M4V-A nrPDB 259 2e-69 2VK6-A nrPDB 242 2e-64 5KKY-A nrPDB 199 2e-51 Sequences not found previously or not previously below threshold: 4X49-A nrPDB 116 1e-26 3SLI-A nrPDB 108 5e-24 2SIL-A nrPDB 96 3e-20 4YZ2-A nrPDB 93 1e-19 3B69-A nrPDB 80 1e-15 2VW0-A nrPDB 77 1e-14 2FHR-A nrPDB 77 1e-14 5HX0-A nrPDB 61 1e-09 1W0O-A nrPDB 60 2e-09 2VVL-G nrPDB 35 0.066 2EBS-A nrPDB 34 0.088 3H6J-A nrPDB 32 0.41 4EQV-A nrPDB 32 0.48 3C8Z-A nrPDB 31 0.78 3U14-A nrPDB 31 0.87 1YRZ-A nrPDB 31 0.89 1V57-A nrPDB 31 0.95 6I9E-H nrPDB 31 1.1 >2F11-A nrPDB Length = 382 Score = 584 bits (1506), Expect = e-167, Method: Composition-based stats. Identities = 379/380 (99%), Positives = 380/380 (100%) Query: 1 MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYD 60 MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYD Sbjct: 3 MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYD 62 Query: 61 APTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN 120 APTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN Sbjct: 63 APTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN 122 Query: 121 VTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYA 180 VTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQL+DRARSLVVPAYA Sbjct: 123 VTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLNDRARSLVVPAYA 182 Query: 181 YRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL 240 YRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL Sbjct: 183 YRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL 242 Query: 241 RARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTH 300 RARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTH Sbjct: 243 RARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTH 302 Query: 301 SWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYE 360 SWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYE Sbjct: 303 SWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYE 362 Query: 361 EIVFLMFTLKQAFPAEYLPQ 380 EIVFLMFTLKQAFPAEYLPQ Sbjct: 363 EIVFLMFTLKQAFPAEYLPQ 382 >1EUR-A nrPDB Length = 365 Score = 324 bits (831), Expect = 3e-89, Method: Composition-based stats. Identities = 98/363 (26%), Positives = 139/363 (38%), Gaps = 32/363 (8%) Query: 14 QSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEV 73 + G YRIPAL P LLA + R + D +L+R D W Q+V Sbjct: 19 REGFPNYRIPALTVTP-DGDLLASYDGRPTGIDAPGPNSILQRRSTD---GGRTWGEQQV 74 Query: 74 VAQARLDG--HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRA---NVTRLCQVT 128 V+ + +P L D +TGT+F F + Q + T NV T Sbjct: 75 VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVAT 134 Query: 129 STDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQ 188 STD G TWS D P +R A G G L+ A L+ Q Sbjct: 135 STDGGLTWSHRTITADITPDPGWRS-RFAASGEGIQLRYGPHAGRLIQQYTIINAAGAFQ 193 Query: 189 RPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL--RARVQA 246 A S DHGRTW G V E + E+ G V LN+R R A Sbjct: 194 -----AVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGR---VLLNSRDSARSGYRKVA 245 Query: 247 QSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRAD 306 ST+ G + + + L P P + +FP +G + A+ LL+++ R+ Sbjct: 246 VSTDGGHSYGPVTIDRDL--PDPTNNASIIRAFPDAPAGS-ARAKVLLFSNAASQTSRSQ 302 Query: 307 LGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLM 366 + + W + GS +YS L ++ PDG+ +G LYE I + Sbjct: 303 --GTIRMSCDDGQTWPVSKVFQPGSMSYSTLTAL---PDGT--YGLLYE--PGTGIRYAN 353 Query: 367 FTL 369 F L Sbjct: 354 FNL 356 >1EUU-A nrPDB Length = 605 Score = 323 bits (828), Expect = 6e-89, Method: Composition-based stats. Identities = 98/363 (26%), Positives = 139/363 (38%), Gaps = 32/363 (8%) Query: 14 QSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEV 73 + G YRIPAL P LLA + R + D +L+R D W Q+V Sbjct: 19 REGFPNYRIPALTVTP-DGDLLASYDGRPTGIDAPGPNSILQRRSTD---GGRTWGEQQV 74 Query: 74 VAQARLDG--HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRA---NVTRLCQVT 128 V+ + +P L D +TGT+F F + Q + T NV T Sbjct: 75 VSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVAT 134 Query: 129 STDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQ 188 STD G TWS D P +R A G G L+ A L+ Q Sbjct: 135 STDGGLTWSHRTITADITPDPGWRS-RFAASGEGIQLRYGPHAGRLIQQYTIINAAGAFQ 193 Query: 189 RPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHL--RARVQA 246 A S DHGRTW G V E + E+ G V LN+R R A Sbjct: 194 -----AVSVYSDDHGRTWRAGEAVGVGMDENKTVELSDGR---VLLNSRDSARSGYRKVA 245 Query: 247 QSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRAD 306 ST+ G + + + L P P + +FP +G + A+ LL+++ R+ Sbjct: 246 VSTDGGHSYGPVTIDRDL--PDPTNNASIIRAFPDAPAGS-ARAKVLLFSNAASQTSRSQ 302 Query: 307 LGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLM 366 + + W + GS +YS L ++ PDG+ +G LYE I + Sbjct: 303 --GTIRMSCDDGQTWPVSKVFQPGSMSYSTLTAL---PDGT--YGLLYE--PGTGIRYAN 353 Query: 367 FTL 369 F L Sbjct: 354 FNL 356 >4BBW-A nrPDB Length = 544 Score = 317 bits (811), Expect = 6e-87, Method: Composition-based stats. Identities = 86/372 (23%), Positives = 143/372 (38%), Gaps = 47/372 (12%) Query: 16 GAHAYRIPALLYLPGQQSLLAFAEQRASKKD--EHAELIVLRRGDYDAPTHQVQWQAQEV 73 G+ ++RIP L+ L + + S D E+ ++ + R D W+ + Sbjct: 199 GSASFRIPGLVTSNKGTLLGVYDVRYNSSVDLQEYVDVGLSRSTD-----GGKTWEKMRL 253 Query: 74 VAQ-ARLDG-----HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANV-----T 122 DG + +P L D QT T+++ G ++ + + Sbjct: 254 PLSFGEYDGLPAAQNGVGDPSILVDTQTNTIWVVAAWTHGMGNQRAWWSSHPGMDLYQTA 313 Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYR 182 +L STD G+TWS P ++T+ P+ W GPG + + D +LV P Sbjct: 314 QLVMAKSTDDGKTWSKPINITEQVKDPS---WYFLLQGPGRGITMSD--GTLVFPTQFID 368 Query: 183 KLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRA 242 +P+A S D G+TW + +T E QV E E G V+ LN R + Sbjct: 369 STR-----VPNAGIMYSKDRGKTWKMHNMARTNTTEAQVVETEPG---VLMLNMRDNRGG 420 Query: 243 -RVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHS 301 R A + + G + E +K ++ P C S+I + + LL+++P + Sbjct: 421 SRAVAITKDLGKTWTEHPSSRKALQEPV--CMASLIHVEAEDNVLDKDI--LLFSNPNTT 476 Query: 302 WQRADLGAYLNPRPPAPEAW-SEPVL-LAKGS-CAYSDLQSMGTGPDGSPLFGCLYEAND 358 R + + W E L L +G YS L + G LYE++ Sbjct: 477 RGRNHI--TIKASLDDGLTWLPEHQLMLDEGEGWGYSCLTMI-----DRETIGILYESS- 528 Query: 359 YEEIVFLMFTLK 370 + F LK Sbjct: 529 AAHMTFQAVKLK 540 >4FJ6-A nrPDB Length = 523 Score = 316 bits (809), Expect = 1e-86, Method: Composition-based stats. Identities = 85/359 (23%), Positives = 137/359 (38%), Gaps = 46/359 (12%) Query: 16 GAHAYRIPALLYLPGQQSLLAFAEQRASKKD--EHAELIVLRRGDYDAPTHQVQWQAQEV 73 G+ A+RIP L+ L + + S D E ++ V R D W+ V Sbjct: 177 GSAAFRIPGLVTTNNGTLLGVYDIRYNSSVDLQEKIDIGVSRSTDKGQT-----WEPMRV 231 Query: 74 VAQA-RLDG-----HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVT----- 122 + DG + +P L D +T T+++ G E+ + +T Sbjct: 232 AMTFKQTDGLPHGQNGVGDPSILVDEKTNTIWVVAAWTHGMGNERAWWNSMPGMTPDETA 291 Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYR 182 +L V S D G+TWS P ++T P+ W GPG + + D +LV P Sbjct: 292 QLMLVKSEDDGKTWSEPINITSQVKDPS---WYFLLQGPGRGITMQD--GTLVFPIQFID 346 Query: 183 KLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRA 242 +P+A S D G+TW + +T E QVAEVE G V+ LN R + Sbjct: 347 ATR-----VPNAGIMYSKDRGKTWHLHNLARTNTTEAQVAEVEPG---VLMLNMRDNRGG 398 Query: 243 -RVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHS 301 R A + + G + E + ++ C S+I + + G LL+++P + Sbjct: 399 SRAVATTKDLGKTWTEHPSSRSALQESV--CMASLIKVNAKDNITGKD--LLLFSNPNTT 454 Query: 302 WQRADLGAYLNPRPPAPEAWS-EPVLL--AKGSCAYSDLQSMGTGPDGSPLFGCLYEAN 357 R + + W E +L YS L + G YE++ Sbjct: 455 KGRNHI--TIKASLDGGLTWPTEHQVLLDEAEGWGYSCLSMI-----DKETVGIFYESS 506 >4Q6K-A nrPDB Length = 525 Score = 308 bits (789), Expect = 2e-84, Method: Composition-based stats. Identities = 84/359 (23%), Positives = 136/359 (37%), Gaps = 46/359 (12%) Query: 16 GAHAYRIPALLYLPGQQSLLAFAEQRASKKD--EHAELIVLRRGDYDAPTHQVQWQAQEV 73 G+ A+RIP L L + + S D EH ++ + R D W+ + Sbjct: 180 GSAAFRIPGLATTNKGTLLGVYDVRYNSSVDLQEHVDVGLSRSVD-----GGKTWEKMRL 234 Query: 74 VAQARLDG------HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANV-----T 122 G + +P L D +T T ++ G ++ + + Sbjct: 235 PLAFGETGGLPAAQNGVGDPSILVDTKTNTTWVVAAWTHGMGNQRAWWSSYPGMDMNHTA 294 Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYR 182 +L STD G+TWS P ++TD P+ W GPG + + D +LV P Sbjct: 295 QLVLSKSTDDGKTWSEPINITDQVKDPS---WYFLLQGPGRGITMQD--GTLVFPIQFID 349 Query: 183 KLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRA 242 +P+A S D G TW ++ +T E QVAEVE G V+ LN R + Sbjct: 350 STR-----VPNAGIMYSKDRGETWKIHNYARTNTTEAQVAEVEPG---VLMLNMRDNRGG 401 Query: 243 -RVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHS 301 R A + + G + E +K ++ P C S+IS + + LL+++P Sbjct: 402 SRAVATTKDLGKTWTEHPSSRKALQEPV--CMASLISVKAADNTLNKDI--LLFSNPNTV 457 Query: 302 WQRADLGAYLNPRPPAPEAW-SEPVLL--AKGSCAYSDLQSMGTGPDGSPLFGCLYEAN 357 R + + W E ++ YS L + G LYE++ Sbjct: 458 KGRHHI--TIKASLDGGITWLPEHQVMLDEGDGWGYSCLTMI-----DKETVGILYESS 509 >4M4V-A nrPDB Length = 422 Score = 259 bits (660), Expect = 2e-69, Method: Composition-based stats. Identities = 75/306 (24%), Positives = 117/306 (38%), Gaps = 51/306 (16%) Query: 16 GAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAEL-IVLRRGDYDAPTHQ--VQWQA-Q 71 G H++RIPA++ + +LAFAE R + ++ +V +R A W+ + Sbjct: 70 GFHSFRIPAVVRTTTGR-ILAFAEGRRHTNQDFGDINLVYKRTKTTANNGASPSDWEPLR 128 Query: 72 EVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIA------------IPGQVTEQQQLQTRA 119 EVV NP P+ D T++LF +P ++ T Sbjct: 129 EVVGSG---AGTWGNPTPVVDDD-NTIYLFLSWNGATYSQNGKDVLPDGTVTKKIDSTWE 184 Query: 120 NVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAY 179 L S D G TWS P DLT W+ AVGPG+ ++L LV+PA Sbjct: 185 GRLHLYLTESRDDGNTWSKPVDLTKELTPDG---WAWDAVGPGNGIRLT--TGELVIPAM 239 Query: 180 AYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSH 239 I R P RTW+ + V+T + ++ + S Sbjct: 240 GRN---IIGRGAPG---------NRTWSVQRLSGAG---AEGTIVQTPDGKLYRNDRPSQ 284 Query: 240 LRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPT 299 R+ A+ T +G P P CQGSV+ + S +PA+ + + Sbjct: 285 KGYRMVARGTLEGF----GAFAPDAGLPDPA-CQGSVLRYNSD-----APARTIFLNSAS 334 Query: 300 HSWQRA 305 + +RA Sbjct: 335 GTSRRA 340 >2VK6-A nrPDB Length = 452 Score = 242 bits (617), Expect = 2e-64, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 111/297 (37%), Gaps = 57/297 (19%) Query: 107 GQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTF-AVGPGHCL 165 + + + V S D G+TWS P+++ ++W F + PG + Sbjct: 172 DNINSSTAPLKAKGTSYINLVYSDDDGKTWSEPQNIN----FQVKKDWMKFLGIAPGRGI 227 Query: 166 QLHD--RARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGH------------F 211 Q+ + +VVP Y + ++ S+ S D G+ W G Sbjct: 228 QIKNGEHKGRIVVPVY-----YTNEKGKQSSAVIYSDDSGKNWTIGESPNDNRKLENGKI 282 Query: 212 VAQDT--------LECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQES-QLVK 262 + T ECQV E+ G+ ++ N +L A S + G + E+ + Sbjct: 283 INSKTLSDDAPQLTECQVVEMPNGQLKLFMRNLSGYLN---IATSFDGGATWDETVEKDT 339 Query: 263 KLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHP-THSWQRA--------DLGAYLNP 313 ++EP CQ SVI++ G + +++++P S +G Y N Sbjct: 340 NVLEP---YCQLSVINYSQKVDGKDA----VIFSNPNARSRSNGTVRIGLINQVGTYENG 392 Query: 314 RPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLK 370 P W L+ G AYS L + G G LYE EE+ ++ LK Sbjct: 393 EPKYEFDWKYNKLVKPGYYAYSCLTELSNGN-----IGLLYEGTPSEEMSYIEMNLK 444 >5KKY-A nrPDB Length = 496 Score = 199 bits (505), Expect = 2e-51, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 97/271 (35%), Gaps = 55/271 (20%) Query: 122 TRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTF-AVGPGHCLQLHD--RARSLVVPA 178 + L S D G+TWS+P+D+T +W F VGPG + L + +++P Sbjct: 238 SYLWMSYSDDDGKTWSAPQDITPMVK----ADWMKFLGVGPGTGIVLRNGPHKGRILIPV 293 Query: 179 YAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQD-------------------TLEC 219 Y + + S S DHG+TW G V + E Sbjct: 294 YTTNNVSHLDGSQSSRVI-YSDDHGKTWHAGEAVNDNRQVDGQKIHSSTMNNRRAQNTES 352 Query: 220 QVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISF 279 V ++ G+ ++ L+ A S + G+ +++ +K+ + Q S I Sbjct: 353 TVVQLNNGDVKLFMRGLTGDLQ---VATSKDGGVTWEKD--IKRYPQVKDVYVQMSAIHT 407 Query: 280 PSPR------SGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCA 333 S G P + H + +L W + + KG A Sbjct: 408 MHEGKEYIILSNAGGPKRENGMVHLARVEENGEL------------TWLKHNPIQKGEFA 455 Query: 334 YSDLQSMGTGPDGSPLFGCLYEANDYEEIVF 364 Y+ LQ +G G +G LYE + + + Sbjct: 456 YNSLQELGNGE-----YGILYEHTEKGQNAY 481 Score = 66.5 bits (160), Expect = 2e-11, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 103/338 (30%), Gaps = 60/338 (17%) Query: 8 QKESVFQSGAH---------AYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGD 58 +K +F+SG + +YRIPALL + E+R D ++ ++ R Sbjct: 29 EKTDIFESGRNGNPNKDGIKSYRIPALLKTDKGTLIAGADERRLHSSD-WGDIGMVIRRS 87 Query: 59 YDAPTHQVQWQAQEVVAQARLDGHRSMNPCP----------LYDAQTGTLFLFFIAIP-- 106 D + W + V D ++ +P + D +T +F + P Sbjct: 88 ED---NGKTWGDR-VTITNLRDNPKASDPSIGSPVNIDMVLVQDPETKRIFSIYDMFPEG 143 Query: 107 ----GQVTEQQQ-LQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGP 161 G +++++ + T + G ++ + T V P Sbjct: 144 KGIFGMSSQKEEAYKKIDGKTYQILYREGEKG-AYTIRENGT-VYTPDGKATDYRVVVDP 201 Query: 162 GHCLQLHD-----RARSLVVPAYA-YRKLHPIQRPIPSAFCF-LSHDHGRTWARGHFVA- 213 D + L+ Y K P + S S D G+TW+ + Sbjct: 202 -VKPAYSDKGDLYKGDQLLGNIYFTTNKTSPFRIAKDSYLWMSYSDDDGKTWSAPQDITP 260 Query: 214 ---------QDTLECQVAEVETGEQR------VVTLNARSHL---RARVQAQSTNDGLDF 255 + G + V T N SHL ++ S + G + Sbjct: 261 MVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLDGSQSSRVIYSDDHGKTW 320 Query: 256 QESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWL 293 + V + Q S ++ ++ + Q Sbjct: 321 HAGEAVNDNRQVDGQKIHSSTMNNRRAQNTESTVVQLN 358 >4X49-A nrPDB Length = 489 Score = 116 bits (291), Expect = 1e-26, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 86/253 (33%), Gaps = 40/253 (15%) Query: 122 TRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHD--RARSLVVPAY 179 T L S D G TWS + ++ + +GPG Q+ + A L+VP Y Sbjct: 236 TYLAMKYSDDEGETWSDLQIVSTFKPEESK----FLVLGPGVGKQIANGEHAGRLIVPLY 291 Query: 180 AYRKLHPIQRPIPSAFCFLSHDHGRTWARGHF---VAQDTLECQVAEVETGEQRVVTLNA 236 + S DHG W T E Q+ E+ G + Sbjct: 292 SKSSAEL--------GFMYSDDHGNNWTYVEADQNTGGATAEAQIVEMPDGSLKTYLRTG 343 Query: 237 RSHLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYT 296 ++ Q ST+ G + E + ++ G Q SVI++ P G + +L + Sbjct: 344 SGYI---AQVMSTDGGETWSERVPLTEIATT-GYGTQLSVINYSQPVDGKPA----ILLS 395 Query: 297 HPTHSWQRADLGAYL--------NPRPPAPEAWS--EPVLLAKGSCAYSDLQSMGTGPDG 346 P + R + ++ + + W V + +YS L + G Sbjct: 396 APNATNGRKNGKIWIGLISETGNSGKDKYSVDWKYCYSVDTPQMGYSYSCLTELPDGE-- 453 Query: 347 SPLFGCLYEANDY 359 G LYE D Sbjct: 454 ---IGLLYEKYDS 463 Score = 33.4 bits (74), Expect = 0.17, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 12/70 (17%) Query: 90 LYDAQTGTLFLFFIAIP--GQVTEQQQLQTRA----------NVTRLCQVTSTDHGRTWS 137 +Y G + + A G T + Q+ + QV STD G TWS Sbjct: 301 MYSDDHGNNWTYVEADQNTGGATAEAQIVEMPDGSLKTYLRTGSGYIAQVMSTDGGETWS 360 Query: 138 SPRDLTDAAI 147 LT+ A Sbjct: 361 ERVPLTEIAT 370 >3SLI-A nrPDB Length = 679 Score = 108 bits (269), Expect = 5e-24, Method: Composition-based stats. Identities = 52/253 (20%), Positives = 84/253 (33%), Gaps = 42/253 (16%) Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDR--ARSLVVPAYA 180 L S D G +WS D+ + + VGPG Q+ A L+VP Y+ Sbjct: 427 YLAMRYSDDEGASWSD-LDIVSSFKPEVSK---FLVVGPGIGKQISTGENAGRLLVPLYS 482 Query: 181 YRKLHPIQRPIPSAFCFLSHDHGRTWA---RGHFVAQDTLECQVAEVETGEQRVVTLNAR 237 S DHG W + T E Q+ E+ G + R Sbjct: 483 KSSAEL--------GFMYSDDHGDNWTYVEADNLTGGATAEAQIVEMPDGSLKTY---LR 531 Query: 238 SHLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTH 297 + + S + G + ++ + + G Q SVI++ P G + ++ + Sbjct: 532 TGSNCIAEVTSIDGGETWS-DRVPLQGISTTSYGTQLSVINYSQPIDGKPA----IILSS 586 Query: 298 PTHSWQRADLGAYLNPRPPAPEA--------WSEPVLL---AKGSCAYSDLQSMGTGPDG 346 P + R + ++ W + G +YS L + PDG Sbjct: 587 PNATNGRKNGKIWIGLVNDTGNTGIDKYSVEWKYSYAVDTPQMG-YSYSCLAEL---PDG 642 Query: 347 SPLFGCLYEANDY 359 G LYE D Sbjct: 643 Q--VGLLYEKYDS 653 Score = 41.9 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 44/144 (30%), Gaps = 21/144 (14%) Query: 49 AELIVLRRGDYD----APTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIA 104 ++ V D T + A + + P L TGT+ A Sbjct: 173 GDIKVYSNALSDEELIQATGVTTYGENIFYAGDVTESNYFRIPS-LLTLSTGTVISAADA 231 Query: 105 IPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAY----REWSTFAVG 160 G + + + + STD G TWS P T Y +W +VG Sbjct: 232 RYGGTHDSK------SKINIAFAKSTDGGNTWSEP---TLPLKFDDYIAKNIDWPRDSVG 282 Query: 161 PGHCLQLHDRARSLVVPAYAYRKL 184 +Q + S + P KL Sbjct: 283 KNVQIQ---GSASYIDPVLLEDKL 303 >2SIL-A nrPDB Length = 381 Score = 95.8 bits (236), Expect = 3e-20, Method: Composition-based stats. Identities = 67/354 (18%), Positives = 116/354 (32%), Gaps = 34/354 (9%) Query: 20 YRIPALLYLPGQQSLLAFAEQRASKKDE-HAELIVLRRGDYDAPTHQVQWQAQEVVAQAR 78 +RIPA+ ++ + + D+ + R D W + + R Sbjct: 35 FRIPAMCTTSKGTIVVFADARHNTASDQSFIDTAAARSTD-----GGKTWNKKIAIYNDR 89 Query: 79 LDGH--RSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTR----LCQVTSTDH 132 ++ R M+P + G + + ++ R L STD Sbjct: 90 VNSKLSRVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAYRDKAPDTDWDLVLYKSTDD 149 Query: 133 GRTWSS-PRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQRPI 191 G T+S ++ D G G LQL+D LV P R + + Sbjct: 150 GVTFSKVETNIHDIVTKNGTISAM--LGGVGSGLQLND--GKLVFPVQMVRTKNI--TTV 203 Query: 192 PSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRARVQAQSTND 251 + S D G TW+ E +E E +N + R ++ + Sbjct: 204 LNTSFIYSTD-GITWSL----PSGYCEGFGSENNIIEFNASLVNNIRNSGLRRSFETKDF 258 Query: 252 GLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYL 311 G + E + K V+ G QGS I+ PS + + + + + R+D+ Y Sbjct: 259 GKTWTEFPPMDKKVDNRNHGVQGSTITIPSGNKLVAAHSSA---QNKNNDYTRSDISLYA 315 Query: 312 N----PRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEE 361 + + + P + YS L D L+ +YEAN E Sbjct: 316 HNLYSGEVKLIDDF-YPKVGNASGAGYSCLSYRKNV-DKETLY-VVYEANGSIE 366 >4YZ2-A nrPDB Length = 677 Score = 93.5 bits (230), Expect = 1e-19, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 84/238 (35%), Gaps = 33/238 (13%) Query: 127 VTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHP 186 ++S DHG +WS+P L + +GPG + + +++P+Y Sbjct: 443 ISSNDHGESWSAPTLLPPIMGLNRNAPY----LGPGRGI-IESSTGRILIPSYT------ 491 Query: 187 IQRPIPSAFCFLSHDHGRTWARG--HFVAQDTLECQVAEVETGEQRVVTLNARSHLRARV 244 SAF S D+G +W + + E Q E+ G + R++ Sbjct: 492 ---GKESAFI-YSDDNGASWKVKVVPLPSSWSAEAQFVELSPGVIQAYM---RTNNGKIA 544 Query: 245 QAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQR 304 S + G + + + K V P G Q S+I++ G + ++ + P + R Sbjct: 545 YLTSKDAGTTWSAPEYL-KFVSNPSYGTQLSIINYSQLIDGKKA----VILSTPNSTNGR 599 Query: 305 ADLGAYLNPRPPAPE-AWSEPVLLAKGS--CAYSDLQSMGTGPDGSPLFGCLYEANDY 359 ++ W + + +YS L + G ++E D Sbjct: 600 KHGQIWIGLINDDNTIDWRYHHDVDYSNYGYSYSTLTELPNHE-----IGLMFEKFDS 652 Score = 37.6 bits (85), Expect = 0.009, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 51/169 (30%), Gaps = 42/169 (24%) Query: 88 CPLYDAQTGTLFLFFIA-IPGQVTEQQQL-QTRANVTRLCQ---------VTSTDHGRTW 136 +Y G + + +P + + Q + V + +TS D G TW Sbjct: 496 AFIYSDDNGASWKVKVVPLPSSWSAEAQFVELSPGVIQAYMRTNNGKIAYLTSKDAGTTW 555 Query: 137 SSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPSA-- 194 S+P E+ F P + QL S++ + + P++ Sbjct: 556 SAP-------------EYLKFVSNPSYGTQL-----SIINYSQLIDGKKAVILSTPNSTN 597 Query: 195 --------FCFLSHDHGRTWARGH---FVAQDTLECQVAEVETGEQRVV 232 ++ D+ W H + + E+ E ++ Sbjct: 598 GRKHGQIWIGLINDDNTIDWRYHHDVDYSNYGYSYSTLTELPNHEIGLM 646 Score = 33.8 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Query: 120 NVTRLCQVTSTDHGRTWSSPR-DLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSL 174 N + S D+G+TW+ P+ L P EW VG G LQ+ A + Sbjct: 255 NKINIATSYSDDNGKTWTKPKLTLAFDDFAPVPLEWPR-EVG-GRDLQISGGATYI 308 >3B69-A nrPDB Length = 648 Score = 80.4 bits (196), Expect = 1e-15, Method: Composition-based stats. Identities = 53/317 (16%), Positives = 113/317 (35%), Gaps = 35/317 (11%) Query: 2 ASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDA 61 + +P + V + H++R+PAL+ ++A A+ R + ++ + Sbjct: 30 SKVPFEKDGKVTERVVHSFRLPALV--NVDGVMVAIADARYETS---FDNSLIDTVAKYS 84 Query: 62 PTHQVQWQAQEVVAQARLDG-HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRAN 120 W+ Q + +R R ++P + + L++ + + + + + Sbjct: 85 VDDGETWETQIAIKNSRASSVSRVVDPTVIV--KGNKLYVL---VGSYNSSRSYWTSHGD 139 Query: 121 -------VTRLCQVTSTDHGR-----TWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLH 168 + ST G+ W SP L + + +G G + + Sbjct: 140 ARDWDILLAVGEVTKSTAGGKITASIKWGSPVSLKEFFPAEMEGMHTNQFLG-GAGVAIV 198 Query: 169 DRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGE 228 +LV P K + + F S D G+TW G + C E Sbjct: 199 ASNGNLVYPVQVTNK-----KKQVFSKIFYSEDEGKTWKFGK--GRSAFGCSEPVALEWE 251 Query: 229 QRVVTLNARSHLRARVQAQSTNDGLDFQE-SQLVKKLVEPPPQGCQGSVISFPSPRSGPG 287 +++ + R R+ +S++ G + E + ++ P P+ Q S + + G Sbjct: 252 GKLIINTRVDYRR-RLVYESSDMGNTWLEAVGTLSRVWGPSPKSNQPGSQSSFTAVTIEG 310 Query: 288 SPAQWLLYTHPTHSWQR 304 + +L+THP + R Sbjct: 311 --MRVMLFTHPLNFKGR 325 >2VW0-A nrPDB Length = 697 Score = 77.3 bits (188), Expect = 1e-14, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 75/244 (30%), Gaps = 35/244 (14%) Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYR 182 + TS + G +W + L + T+ PG L L R L+ Y Sbjct: 458 YIAMTTSQNRGESWEQFKLL---PPFLGEKHNGTYLC-PGQGLALKSSNR-LIFATYTSG 512 Query: 183 KLHPIQRPIPSAFCFLSHDHGRTWARGHFV---AQDTLECQVAEVETGEQRVVTLNARSH 239 +L + +S D G+TW + T E Q+ E+ G R Sbjct: 513 ELTYL----------ISDDSGQTWKKSSASIPFKNATAEAQMVELRDGVIRTFFRTTTGK 562 Query: 240 LRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPT 299 + S + G + + + ++ G Q S I + G + ++ + P Sbjct: 563 IAY---MTSRDSGETWSKVSYI-DGIQQTSYGTQVSAIKYSQLIDGKEA----VILSTPN 614 Query: 300 HSWQR--ADLGAYLNPRPPAPEAWSEPVLLA-KGS-CAYSDLQSMGTGPDGSPLFGCLYE 355 R L L + W + AYS + + G L+E Sbjct: 615 SRSGRKGGQLVVGLVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPN-----HHIGVLFE 669 Query: 356 ANDY 359 D Sbjct: 670 KYDS 673 Score = 32.6 bits (72), Expect = 0.32, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%) Query: 116 QTRANVTRLCQVTS--TDHGRTWSSPR 140 T + +++ TS D+G+TWS P Sbjct: 267 GTHDSKSKINIATSYSDDNGKTWSEPI 293 >2FHR-A nrPDB Length = 652 Score = 76.9 bits (187), Expect = 1e-14, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 89/300 (29%), Gaps = 33/300 (11%) Query: 18 HAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQA 77 H++RIP ++ ++A A+ R + + + W Q + + Sbjct: 47 HSFRIPTIV--NVDGVMVAIADARYETS---FDNSFIETAVKYSVDDGATWNTQIAIKNS 101 Query: 78 RLDG-HRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTR--ANVTRLCQVTSTDHGR 134 R R M+ + + + Q + + + S +G+ Sbjct: 102 RASSVSRVMDATVIVKGNKLYILVGSFNKTRNSWTQHRDGSDWEPLLVVGEVTKSAANGK 161 Query: 135 T-----WSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQR 189 T W P L + +G G + +LV P Sbjct: 162 TTATISWGKPVSLKPLFPAEFDGILTKEFIG-GVGAAIVASNGNLVYPVQIADM-----G 215 Query: 190 PIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRARVQAQST 249 S D G TW + C V E +++ N R R+ +S+ Sbjct: 216 GRVFTKIMYSEDDGNTWKFAE--GRSKFGCSEPAVLEWEGKLIINNRVDGNR-RLVYESS 272 Query: 250 NDGLDFQE-----SQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQR 304 + G + E S + Q CQ S ++ + +L+THP + R Sbjct: 273 DMGKTWVEALGTLSHVWTNSPTSNQQDCQSSFVAVTIEG------KRVMLFTHPLNLKGR 326 >5HX0-A nrPDB Length = 402 Score = 60.7 bits (145), Expect = 1e-09, Method: Composition-based stats. Identities = 55/324 (16%), Positives = 90/324 (27%), Gaps = 35/324 (10%) Query: 17 AHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYD-----APTHQVQWQAQ 71 HA P+++ + +LAF +RA + E W + Sbjct: 56 FHA-AFPSVIKKKNGEIVLAF--RRAPDRKVFGEKGTNHVDPNSYLVSVKSKDGKTWTPE 112 Query: 72 EVVAQARLDGHRSMNPCPLYDAQTGTL----FLFFIAIPGQVTEQQQLQTRAN---VTRL 124 + + G S +PC L + GT+ + + P + ++ A Sbjct: 113 PELIYSHPFG-GSQDPC-LLQLKDGTILCASYGWAFLRPDGMENLKKPYFLAGGAVFLGG 170 Query: 125 CQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKL 184 + STD G++W P Y + ++ A + Sbjct: 171 YVLRSTDGGKSWQGPLYPPHIEPEINYTAMGEKLPAYNRGAMYEGKNGRILWVVAATDRQ 230 Query: 185 HPIQRPIPSAFCFLSHDHGRTWARGHFVAQDT----LECQVAEVETGEQRVVTLNARSHL 240 P S +S D G TW VA D E V E G+ A Sbjct: 231 SPN---KTSNHLLISDDKGLTWKYSAPVAVDEKVSFNEASVYETPKGDVVAFLRTA-GLG 286 Query: 241 RARVQAQSTNDGLDFQESQLVKKLVEP------PPQGCQGSVISFPSPRSGPGSP---AQ 291 A+S + G F + + P P S + G + A+ Sbjct: 287 DQACIARSVDGGKTFTAWEKMGFQGHPMHALRLPDNRVLLSY-GYRHKPLGIRARILNAE 345 Query: 292 WLLYTHPTHSWQRADLGAYLNPRP 315 + R D G P Sbjct: 346 CTDFATAPEIVLRTDGGTTDLGYP 369 >1W0O-A nrPDB Length = 781 Score = 60.0 bits (143), Expect = 2e-09, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 70/217 (32%), Gaps = 45/217 (20%) Query: 160 GPGHCLQL-------HDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGH-- 210 GPGH + L + L+ PA + R + S D G W G Sbjct: 547 GPGHGITLTRQQNISGSQNGRLIYPAI------VLDRFFLNVMSIYSDDGGSNWQTGSTL 600 Query: 211 -----------FVAQDTLECQVAEVETGEQRVV-TLNARSHLRA-----RVQAQSTNDGL 253 + E + E++ G+ + L+ + R Q S + G+ Sbjct: 601 PIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQFLSKDGGI 660 Query: 254 DFQ--ESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHP----THSWQRADL 307 + E+ S+ F + +LL+T+P + R +L Sbjct: 661 TWSLLEANNANVFSNISTGTVDASITRFEQSDG-----SHFLLFTNPQGNPAGTNGRQNL 715 Query: 308 GAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGP 344 G + W P+ L G+ AYSD+ + + Sbjct: 716 GLWF--SFDEGVTWKGPIQLVNGASAYSDIYQLDSEN 750 Score = 48.4 bits (113), Expect = 6e-06, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 72/225 (32%), Gaps = 39/225 (17%) Query: 21 RIPALLYLP-GQQSLLAFAEQRASKKDEHAELI----VLRRGDYDAPTHQVQW--QAQEV 73 RIP+++ + AFAE+R D L ++ R D + W + Sbjct: 224 RIPSIVASSVTPGVVTAFAEKRVGGGD-PGALSNTNDIITRTSRD---GGITWDTELNLT 279 Query: 74 VAQARLDGHRSMNPCPLYDAQTGTLFL-FFIAIPGQVTEQQQLQTRANVTRLCQVTSTDH 132 D +P P+YD + T+ + + +++ V Sbjct: 280 EQINVSDEFDFSDPRPIYDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVAS 339 Query: 133 GRTWSSPRDLTDAAIGPAY--------------------REWSTFAV-----GPGHCLQL 167 G W +P D+TD ++ ++W + A G + +Q+ Sbjct: 340 GN-WQAPIDVTDQVKERSFQIAGWGGSELYRRNTSLNSQQDWQSNAKIRIVDGAANQIQV 398 Query: 168 HDRARSLVVPAYAYRKLHPIQR-PIPSAFCFLSHDHGRTWARGHF 211 D +R VV + SA L +H + + + Sbjct: 399 ADGSRKYVVTLSIDESGGLVANLNGVSAPIILQSEHAKVHSFHDY 443 >2VVL-G nrPDB Length = 495 Score = 34.9 bits (78), Expect = 0.066, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 2/92 (2%) Query: 65 QVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQ-VTEQQQLQTRAN-VT 122 QW + + Q P + D + + G + T A T Sbjct: 6 GYQWTPETGLTQGVTSLGVISPPTNIEDTDKDGPWDVIVIGGGYCGLTATRDLTVAGFKT 65 Query: 123 RLCQVTSTDHGRTWSSPRDLTDAAIGPAYREW 154 L + GR+WSS D +G + W Sbjct: 66 LLLEARDRIGGRSWSSNIDGYPYEMGGTWVHW 97 >2EBS-A nrPDB Length = 789 Score = 34.1 bits (76), Expect = 0.088, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 149 PAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWAR 208 W+ F P H + ++ V A + + + ++ + SHD+G+TW+ Sbjct: 524 DGGDAWTIFPTCPPGMNASHYQGSTIAVDASGSQIVWSTKLDEQASGPWYSHDYGKTWS- 582 Query: 209 GHFVAQDTLECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDF 255 V L+ Q A V + + + T A ST+ G + Sbjct: 583 ---VPAGDLKAQTANVLSDKVQDGTFYATD---GGKFFVSTDGGKSY 623 Score = 32.6 bits (72), Expect = 0.33, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 21/119 (17%) Query: 128 TSTDHGRTWSSP----RDLTDAAIGPAYREWSTFAVGPGHCLQLHDRA------------ 171 S D+G+TWS P + T + ++ + +A G D Sbjct: 573 YSHDYGKTWSVPAGDLKAQTANVLSDKVQDGTFYATDGGKFFVSTDGGKSYAAKGAGLVT 632 Query: 172 RSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQR 230 + ++PA + P+P F S D G + F T + V + + Sbjct: 633 GTSLMPAVNPWVAGDVWVPVPEGGLFHSTDFGAS-----FTRVGTANATLVSVGAPKSK 686 >3H6J-A nrPDB Length = 438 Score = 32.2 bits (71), Expect = 0.41, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 32/108 (29%), Gaps = 11/108 (10%) Query: 81 GHRSMNPCPLYDAQTGTLFLFFIAIP---GQVTEQQQLQTRANVTRLCQVTSTDHGRTWS 137 G +Y T + +P G + ++ + A L Q S D G TW+ Sbjct: 164 GETWGEGSTIYSG--NTPYNETSYLPVGDGVILAVARVGSGAGGA-LRQFISLDDGGTWT 220 Query: 138 SPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLH 185 ++T V P + VV Y R H Sbjct: 221 DQGNVTAQNGDSTD-----ILVAPSLSYIYSEGGTPHVVLLYTNRTTH 263 >4EQV-A nrPDB Length = 512 Score = 31.8 bits (70), Expect = 0.48, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 20/73 (27%) Query: 66 VQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLC 125 W+ Q + + + + + + D + F P Q Sbjct: 63 TNWEDQPIAIAPKRNDSGAFSGSMVVDYNNTSGFFNDTIDPRQRCVAIWTYNTPESEEQY 122 Query: 126 QVTSTDHGRTWSS 138 S D G T++ Sbjct: 123 ISYSLDGGYTFTE 135 >3C8Z-A nrPDB Length = 414 Score = 31.1 bits (68), Expect = 0.78, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 35/132 (26%), Gaps = 12/132 (9%) Query: 162 GHCLQLHDRARSLVVPAYAYRKLHP--------IQRPIPSAFCFLSHDHGRTWARGHFVA 213 G L + L+ P + Y H R H + +RG+ V Sbjct: 242 GTGLDIQGGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVL 301 Query: 214 QDTLECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDG--LDFQESQLVKKLVEPPPQG 271 L Q + + + + R + + ++ + + + P Sbjct: 302 VSQLRAQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEA--PDATD 359 Query: 272 CQGSVISFPSPR 283 V + + Sbjct: 360 VIARVRQYLADD 371 >3U14-A nrPDB Length = 535 Score = 31.1 bits (68), Expect = 0.87, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 20/80 (25%) Query: 62 PTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANV 121 V W E+ D + + D + F P Q + Sbjct: 87 SNDLVHWDEHEIAIGPEHDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPDN 146 Query: 122 TRLCQVTSTDHGRTWSSPRD 141 S D G T++ + Sbjct: 147 QTQDIAFSLDGGYTFTKYEN 166 >1YRZ-A nrPDB Length = 528 Score = 31.1 bits (68), Expect = 0.89, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 25/133 (18%) Query: 72 EVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTD 131 ++ + ++ PC Y GT +L + +Q + VT+ + Sbjct: 62 QLDMKGNMNSGGIWAPCLSYHD--GTFYLIY------TDVKQWHGAFKD-AHNYLVTAQN 112 Query: 132 HGRTWSSPRDLTDAAIGPAY------REW-------STFAVGPGHCLQLHDRA---RSLV 175 WS P L + P+ R+W P + L + + + LV Sbjct: 113 IEGPWSDPIYLNSSGFDPSLFHDDDGRKWLVNMIWDYRKGNHPFAGIILQEYSEAEQKLV 172 Query: 176 VPAYAYRKLHPIQ 188 P K IQ Sbjct: 173 GPVKNIYKGTDIQ 185 >1V57-A nrPDB Length = 241 Score = 31.1 bits (68), Expect = 0.95, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 2/59 (3%) Query: 188 QRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLN--ARSHLRARV 244 + P +A S D +TW + A V T + +V++ N L A V Sbjct: 141 ESPATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANV 199 >6I9E-H nrPDB Length = 146 Score = 30.7 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%) Query: 338 QSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQAFPAEYLPQ 380 ++ + G + + +DYE + TLK A P EY+ Q Sbjct: 69 TNLTDEDALLNVIGMVLDGHDYENDPNVTVTLKAAVPIEYVQQ 111 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.299 0.111 0.277 Lambda K H 0.267 0.0340 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,107,878 Number of Sequences: 36641 Number of extensions: 426247 Number of successful extensions: 1196 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 1016 Number of HSP's gapped (non-prelim): 77 length of query: 380 length of database: 10,336,785 effective HSP length: 99 effective length of query: 281 effective length of database: 6,709,326 effective search space: 1885320606 effective search space used: 1885320606 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 59 (27.6 bits)