BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9Y3D8 (172 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5JZV-A nrPDB 355 7e-99 3IIK-A nrPDB 354 1e-98 1Y63-A nrPDB 128 1e-30 4CVN-A nrPDB 82 2e-16 2X8A-A nrPDB 39 0.002 4QBG-B nrPDB 37 0.005 1P4S-A nrPDB 37 0.005 4Z8X-A nrPDB 37 0.005 5W0T-A nrPDB 37 0.006 3A4L-A nrPDB 37 0.006 3DL0-A nrPDB 36 0.007 3D8B-A nrPDB 36 0.007 1QF9-A nrPDB 36 0.010 3SR0-A nrPDB 36 0.010 4MKG-A nrPDB 35 0.011 4YPN-A nrPDB 35 0.014 5X6J-A nrPDB 35 0.017 6B5C-A nrPDB 35 0.021 5G41-A nrPDB 35 0.022 2P3S-A nrPDB 34 0.027 4PZL-A nrPDB 34 0.032 3M6A-A nrPDB 34 0.033 1ZIO-A nrPDB 34 0.035 1NKS-A nrPDB 34 0.038 3VAA-A nrPDB 34 0.038 4YPL-A nrPDB 33 0.053 4Y0A-A nrPDB 33 0.054 2DHR-A nrPDB 33 0.057 5G3Y-A nrPDB 33 0.062 4QBH-A nrPDB 33 0.078 1YE8-A nrPDB 33 0.080 2IYT-A nrPDB 32 0.097 1IY1-A nrPDB 32 0.097 2H92-A nrPDB 32 0.10 2BWJ-A nrPDB 32 0.11 4K46-A nrPDB 32 0.11 4NTZ-A nrPDB 32 0.12 3H4M-A nrPDB 32 0.12 3BE4-A nrPDB 32 0.14 3FB4-A nrPDB 32 0.15 5VC7-A nrPDB 32 0.16 5G4G-A nrPDB 32 0.16 4AKE-A nrPDB 32 0.16 6AZ0-A nrPDB 32 0.17 5ZQM-A nrPDB 32 0.17 3CM0-A nrPDB 32 0.20 4NP6-A nrPDB 32 0.20 4XGU-A nrPDB 32 0.21 2R65-A nrPDB 31 0.23 4L16-A nrPDB 31 0.23 6HE9-H nrPDB 31 0.24 2SHK-A nrPDB 31 0.24 1IQP-A nrPDB 31 0.25 1UKY-A nrPDB 31 0.25 1OFI-A nrPDB 31 0.27 5UBV-A nrPDB 31 0.27 5WVI-L nrPDB 31 0.29 6HE4-H nrPDB 31 0.29 6FVU-L nrPDB 31 0.29 6EF0-L nrPDB 31 0.30 1ZD8-A nrPDB 31 0.31 1IN6-A nrPDB 31 0.31 1E94-E nrPDB 31 0.32 5U6P-A nrPDB 31 0.35 1IM2-A nrPDB 30 0.36 5Z6Q-A nrPDB 30 0.40 5YCF-B nrPDB 30 0.41 1Z83-A nrPDB 30 0.43 2CE7-A nrPDB 30 0.44 5VQ9-D nrPDB 30 0.46 1ZAK-A nrPDB 30 0.50 5X6K-A nrPDB 30 0.50 3ADK-A nrPDB 30 0.52 5T0C-AD nrPDB 30 0.53 2NZJ-A nrPDB 30 0.53 5WVI-K nrPDB 30 0.54 1LV7-A nrPDB 30 0.54 1KAG-A nrPDB 30 0.56 6EF1-K nrPDB 30 0.56 3H0K-A nrPDB 30 0.57 6CHS-H nrPDB 30 0.57 5KWA-A nrPDB 30 0.57 5VHN-D nrPDB 30 0.60 2BBW-A nrPDB 30 0.60 6MAT-A nrPDB 30 0.61 3R8C-A nrPDB 30 0.63 5VFP-B nrPDB 30 0.64 1TEV-A nrPDB 30 0.64 5XZ2-A nrPDB 30 0.65 2AK3-A nrPDB 30 0.66 6MSK-B nrPDB 30 0.66 1SXJ-B nrPDB 30 0.66 3GMT-A nrPDB 30 0.70 5VHF-B nrPDB 30 0.72 6FVU-I nrPDB 30 0.74 5VHO-B nrPDB 30 0.75 1D2N-A nrPDB 30 0.75 2E87-A nrPDB 30 0.77 6MDP-A nrPDB 29 0.80 3JCO-J nrPDB 29 0.80 3CF0-A nrPDB 29 0.85 4EUN-A nrPDB 29 0.98 3JCP-I nrPDB 29 1.00 6EF2-J nrPDB 29 1.0 6EF1-I nrPDB 29 1.0 5EQT-A nrPDB 29 1.1 6EF0-H nrPDB 29 1.1 3UMF-A nrPDB 29 1.2 6EF3-H nrPDB 29 1.2 5FHF-A nrPDB 29 1.2 5HSW-A nrPDB 29 1.3 6NYV-B nrPDB 29 1.3 3HU1-A nrPDB 28 1.4 3WHK-A nrPDB 28 1.5 5VFU-A nrPDB 28 1.6 2GA8-A nrPDB 28 1.7 5M32-h nrPDB 28 1.7 6MSD-E nrPDB 28 1.8 5GJQ-J nrPDB 28 1.8 6AP1-A nrPDB 28 1.9 5VHP-E nrPDB 28 1.9 5XMK-A nrPDB 28 1.9 5VHO-A nrPDB 28 1.9 5VHP-C nrPDB 28 1.9 3EIH-A nrPDB 28 2.0 5DN8-A nrPDB 28 2.0 3GBG-A nrPDB 28 2.1 6MCK-A nrPDB 28 2.2 5C18-A nrPDB 28 2.4 2I3B-A nrPDB 28 2.5 6EPC-H nrPDB 28 2.6 3TRF-A nrPDB 28 2.7 6EPG-B nrPDB 28 2.7 2QZ4-A nrPDB 28 2.7 3EPJ-A nrPDB 28 2.9 1HQC-A nrPDB 27 3.0 4ZPX-A nrPDB 27 3.4 4LCB-A nrPDB 27 3.5 4D81-A nrPDB 27 3.6 6QI8-A nrPDB 27 3.6 2XSZ-A nrPDB 27 3.8 6G12-A nrPDB 27 4.1 1VIA-A nrPDB 27 4.3 2PNF-A nrPDB 27 4.8 3K1J-A nrPDB 27 5.0 5D4W-A nrPDB 27 5.4 2YVU-A nrPDB 27 5.4 6BLB-A nrPDB 27 5.6 3PVS-A nrPDB 27 5.9 1RPZ-A nrPDB 27 6.0 5FM7-A nrPDB 27 6.1 1SXJ-C nrPDB 27 6.1 2AK2-A nrPDB 27 6.3 2GRJ-A nrPDB 27 6.4 3PXG-A nrPDB 26 6.9 2AKY-A nrPDB 26 7.0 6B5D-A nrPDB 26 7.3 5WC0-A nrPDB 26 7.3 2EXH-A nrPDB 26 7.6 3E0M-A nrPDB 26 7.9 3R20-A nrPDB 26 8.0 3LGA-A nrPDB 26 8.0 6E11-1 nrPDB 26 8.3 5C1S-A nrPDB 26 8.9 1ASO-A nrPDB 26 9.1 >5JZV-A nrPDB Length = 206 Score = 355 bits (910), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 171/172 (99%), Positives = 171/172 (99%) Query: 1 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 60 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR Sbjct: 35 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 94 Query: 61 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 120 VVDELDNQMREGGVIV YHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI Sbjct: 95 VVDELDNQMREGGVIVGYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 154 Query: 121 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 172 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS Sbjct: 155 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 206 >3IIK-A nrPDB Length = 180 Score = 354 bits (908), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 172/172 (100%), Positives = 172/172 (100%) Query: 1 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 60 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR Sbjct: 9 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 68 Query: 61 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 120 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI Sbjct: 69 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 128 Query: 121 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 172 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS Sbjct: 129 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 180 >1Y63-A nrPDB Length = 184 Score = 128 bits (321), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 5/165 (3%) Query: 5 NILLTGTPGVGKTTLGKELASK-SGLKYINVGDLAREEQLYDGYDEEYDCPIL---DEDR 60 NIL+TGTPG GKT++ + +A++ G +++ VG L +E Y YD E D I+ DEDR Sbjct: 12 NILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDR 71 Query: 61 VVDELDNQM-REGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDN 119 ++D ++ M G +VDYH + FPERWFH+V VL T T VL+ERL R Y+E K +N Sbjct: 72 LLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVVVLHTSTEVLFERLTKRQYSEAKRAEN 131 Query: 120 IQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIE 164 ++ EI + EEA +Y+++IV ++ E++ V++I + +E Sbjct: 132 MEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAATVEEIRERVE 176 >4CVN-A nrPDB Length = 191 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 9/163 (5%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 I +TGTPGVGKTT+ K LA K G +Y+N+ D A E+ D E + I D + + Sbjct: 14 IAITGTPGVGKTTIAKLLAEKLGYEYVNLRDFALEKGCGREVDGEVEVEI---DELAYFV 70 Query: 66 DNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIF 125 + ++++ V++D H P +V VLR ++ ERL RGY+++K+ +N++ E+ Sbjct: 71 EKELKDRNVVLDGHLSHLMP---VDLVVVLRAHPRIIGERLRERGYSKEKIGENVEAELV 127 Query: 126 QVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIK 168 + EA ++ I + PEE+ V++I+ I+ +K Sbjct: 128 DAILIEAIDEHENVIEVDTTNKTPEEI---VEEIIGLIKSGVK 167 >2X8A-A nrPDB Length = 274 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 16/30 (53%), Positives = 22/30 (73%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A++SGL +I+V Sbjct: 46 GVLLAGPPGCGKTLLAKAVANESGLNFISV 75 >4QBG-B nrPDB Length = 217 Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 NI+L G PG GK T + + +K G+ +I+ GD+ R Sbjct: 2 NIVLMGLPGAGKGTQAERIVAKYGIPHISTGDMFR 36 >1P4S-A nrPDB Length = 181 Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 65/162 (40%), Gaps = 24/162 (14%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR---EEQLYDGYDEEYDCPI------- 55 +LL G PG GK T +LA K G+ I+ G+L R EE G + + Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSD 62 Query: 56 LDEDRVVDELDNQMREGGVIVDYHGCDFFPERWFH-----------IVFVLRTDTNVLYE 104 L + V D L+N G I+D + + H V R VL E Sbjct: 63 LTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLE 122 Query: 105 RLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPS 146 RL+ RG + TD++ +V Y + TA E QL + Sbjct: 123 RLKGRGRADD--TDDVILNRMKV-YRDETAPLLEYYRDQLKT 161 >4Z8X-A nrPDB Length = 497 Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 16/89 (17%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG-----------DLAREEQLYDGYDEEYDC 53 +LL G PGVGKT L K +A ++ + +I+V AR L++ + C Sbjct: 53 GVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPC 112 Query: 54 PILDEDRVVDELDNQMREGGVIVDYHGCD 82 I +DE+D R G I G D Sbjct: 113 MIF-----IDEIDAVGRARGAIPVGGGHD 136 >5W0T-A nrPDB Length = 304 Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRV---- 61 +LL G PG GKT L K LA +SG +I++ + ++ Y ++ D +++ Sbjct: 80 VLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCI 139 Query: 62 --VDELDNQMRE 71 +DE+D+ +RE Sbjct: 140 IFIDEIDSFLRE 151 >3A4L-A nrPDB Length = 260 Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%) Query: 6 ILLTGTPGVGKTTLGKELA---SKSGLKYINVG-DLAREEQLYDGYDEEYDCPILDEDRV 61 I+LTG PGVGK+T K LA SK+ + I +G DL RE + + E+Y+ I + Sbjct: 7 IILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRES--FPVWKEKYEEFI--KKST 62 Query: 62 VDELDNQMREGGVIVD 77 +D+ ++ VIVD Sbjct: 63 YRLIDSALKNYWVIVD 78 >3DL0-A nrPDB Length = 216 Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T G+ + K G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFR 36 >3D8B-A nrPDB Length = 357 Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 21/30 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT +GK +AS+SG + ++ Sbjct: 119 GILLFGPPGTGKTLIGKCIASQSGATFFSI 148 >1QF9-A nrPDB Length = 194 Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 27/187 (14%) Query: 4 PNILLT-GTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62 PN++ G PG GK T + G +++ GDL R+EQ D E ++ +V Sbjct: 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIV 65 Query: 63 DELDNQMREGGVIVDYHGCDF----FPER-------------WFHIVFVLRTDT--NVLY 103 + I G +F FP + FVL D V+ Sbjct: 66 PSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMT 125 Query: 104 ERLETRGYNEKKLTDNIQC-----EIFQVLYEEATASY-KEEIVHQLPSNKP-EELENNV 156 +RL RG + + DNI+ F V + Y K + V +P+N+ E+ N+V Sbjct: 126 QRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYNDV 185 Query: 157 DQILKWI 163 + + K + Sbjct: 186 ENLFKSM 192 >3SR0-A nrPDB Length = 206 Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE 40 ++ G PG GK T K LA + G +I+ GD+ RE Sbjct: 3 LVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILRE 37 >4MKG-A nrPDB Length = 217 Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 NI+L G PG GK T + + K G+ +I+ GD+ R Sbjct: 2 NIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFR 36 >4YPN-A nrPDB Length = 293 Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 4 PNILLTGTPGVGKTTLGKELASKSGLKY--INVGDLAREEQLYDGYDEEY 51 P ++L G PGVGKT+LG+ +A K+ I++G + R+E G+ Y Sbjct: 144 PILVLVGPPGVGKTSLGRSIARSMNRKFHRISLGGV-RDEAEIRGHRRTY 192 >5X6J-A nrPDB Length = 217 Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 NI+L G PG GK T + K G+ +I+ GD+ R Sbjct: 2 NIVLMGLPGAGKGTQADRIVEKYGIPHISTGDMFR 36 >6B5C-A nrPDB Length = 307 Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 19/31 (61%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +L+ G PG GKT L K +A++ G + NV Sbjct: 60 GVLMVGPPGTGKTMLAKAVATECGTTFFNVS 90 >5G41-A nrPDB Length = 223 Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T +++ K G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQAEKIVEKYGIPHISTGDMFR 36 >2P3S-A nrPDB Length = 217 Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T G+ + G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFR 36 >4PZL-A nrPDB Length = 242 Score = 33.9 bits (76), Expect = 0.032, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE 40 I+L G PG GK T K + K + +I+ GD+ RE Sbjct: 27 IILLGAPGAGKGTQAKIIEQKYNIAHISTGDMIRE 61 >3M6A-A nrPDB Length = 543 Score = 33.9 bits (76), Expect = 0.033, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 4 PNILLTGTPGVGKTTLGKELASKSGLKYINVG-DLAREEQLYDGYDEEY 51 P + L G PGVGKT+L K +A G K++ + R+E G+ Y Sbjct: 109 PILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTY 157 >1ZIO-A nrPDB Length = 217 Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T +++ + G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFR 36 >1NKS-A nrPDB Length = 194 Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 29/128 (22%) Query: 7 LLTGTPGVGKTTL---GKELASKSGL--KYINVGDLAREEQLYDGY----DEEYDCPI-- 55 ++TG PGVGK+T+ KE+ G+ K IN GD L GY DE + Sbjct: 5 IVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEK 64 Query: 56 -----LDEDRVVDELDNQMREGGVIVDYHGCDFFPERWF-------------HIVFVLRT 97 +D + + E EG + +D H P + ++F+L Sbjct: 65 QKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEA 124 Query: 98 DTNVLYER 105 D ++ R Sbjct: 125 DPKIILSR 132 >3VAA-A nrPDB Length = 199 Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 20/32 (62%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINV 34 + I LTG G GKTTLGK A K + +I++ Sbjct: 25 MVRIFLTGYMGAGKTTLGKAFARKLNVPFIDL 56 >4YPL-A nrPDB Length = 555 Score = 33.5 bits (75), Expect = 0.053, Method: Composition-based stats. Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Query: 4 PNILLTGTPGVGKTTLGKELASKSGLKY--INVGDLAREEQLYDGYDEEY 51 P ++L G PGVGKT+LG+ +A K+ I++G + R+E G+ Y Sbjct: 111 PILVLVGPPGVGKTSLGRSIARSMNRKFHRISLGGV-RDEAEIRGHRRTY 159 >4Y0A-A nrPDB Length = 179 Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust. Identities = 15/31 (48%), Positives = 21/31 (67%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYIN 33 LPNI L G G GKTT+G+ LA G ++++ Sbjct: 8 LPNIYLVGPMGAGKTTVGRHLAELLGREFLD 38 >2DHR-A nrPDB Length = 499 Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 16/80 (20%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG-----------DLAREEQLYDGYDEEYDC 53 +LL G PGVGKT L + +A ++ + +I AR L++ C Sbjct: 66 GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFETAKRHAPC 125 Query: 54 PILDEDRVVDELDNQMREGG 73 + +DE+D R+ G Sbjct: 126 IVF-----IDEIDAVGRKRG 140 >5G3Y-A nrPDB Length = 226 Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T +++ + G+ +I+ GD+ R Sbjct: 2 NLILLGPPGAGKGTQAEKIVEEYGIPHISTGDMFR 36 >4QBH-A nrPDB Length = 217 Score = 32.7 bits (73), Expect = 0.078, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T + + G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQAERIVEAYGIPHISTGDMFR 36 >1YE8-A nrPDB Length = 178 Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust. Identities = 14/29 (48%), Positives = 20/29 (68%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN 33 I++TG PGVGKTTL K++ + G + I Sbjct: 2 KIIITGEPGVGKTTLVKKIVERLGKRAIG 30 >2IYT-A nrPDB Length = 184 Score = 32.3 bits (72), Expect = 0.097, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 2 LLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ 42 + P +L G PG GK+T+G+ LA G+ ++ D+A E++ Sbjct: 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDT-DVAIEQR 40 >1IY1-A nrPDB Length = 254 Score = 32.3 bits (72), Expect = 0.097, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 16/80 (20%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG-----------DLAREEQLYDGYDEEYDC 53 +LL G PGVGKT L + +A ++ + +I AR L++ C Sbjct: 51 GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFETAKRHAPC 110 Query: 54 PILDEDRVVDELDNQMREGG 73 + +DE+D R+ G Sbjct: 111 IVF-----IDEIDAVGRKRG 125 >2H92-A nrPDB Length = 219 Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 1 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 M NI L G GK+T+ K +AS+ + Y++ G + R Sbjct: 1 MKAINIALDGPAAAGKSTIAKRVASELSMIYVDTGAMYR 39 >2BWJ-A nrPDB Length = 199 Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 22/36 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 I + G PG GK T ++L K G +++ G+L REE Sbjct: 15 IFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREE 50 >4K46-A nrPDB Length = 214 Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 21/35 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 I+L G PG GK T + + +K G+ I+ GD+ R Sbjct: 2 RIILLGAPGAGKGTQAQFIMAKFGIPQISTGDMLR 36 >4NTZ-A nrPDB Length = 217 Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust. Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 29/175 (16%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV-D 63 N+L+ G PG GK T ++ + + +I+ GD+ R +D+ +V D Sbjct: 7 NLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPD 66 Query: 64 ELDN----------QMREGGVIVD--------YHGCD-FFPERWFHIVFVLRTDTN--VL 102 E+ N ++E G ++D H D E + ++ + N L Sbjct: 67 EVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSL 126 Query: 103 YERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVD 157 ERL R + + E F ++ YKEE +Q +KPE ++ +D Sbjct: 127 LERLSGR------IIHRVTGETFHKVF-NPPVDYKEEDYYQREDDKPETVKRRLD 174 >3H4M-A nrPDB Length = 285 Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT L K +A+++ +I V Sbjct: 53 GILLYGPPGTGKTLLAKAVATETNATFIRV 82 >3BE4-A nrPDB Length = 217 Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 23/36 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE 40 N++L G PG GK T + + + GL +++ GD+ RE Sbjct: 7 NLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLRE 42 >3FB4-A nrPDB Length = 216 Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 NI+L G PG GK T +++ K + +I+ GD+ R Sbjct: 2 NIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFR 36 >5VC7-A nrPDB Length = 564 Score = 32.0 bits (71), Expect = 0.16, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 20/28 (71%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINV 34 LL G PGVGKT L K +A++S +I++ Sbjct: 324 LLYGPPGVGKTLLAKAVATESNANFISI 351 Score = 29.6 bits (65), Expect = 0.75, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 21/29 (72%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT + + +A++SG ++++ Sbjct: 46 VILYGPPGTGKTLIARAVANESGANFLSI 74 >5G4G-A nrPDB Length = 721 Score = 31.6 bits (70), Expect = 0.16, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 20/28 (71%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINV 34 LL G PGVGKT L K +A++S +I++ Sbjct: 500 LLYGPPGVGKTLLAKAVATESNANFISI 527 Score = 29.6 bits (65), Expect = 0.77, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 21/29 (72%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT + + +A++SG ++++ Sbjct: 222 VILYGPPGTGKTLIARAVANESGANFLSI 250 >4AKE-A nrPDB Length = 214 Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 20/35 (57%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 I+L G PG GK T + + K G+ I+ GD+ R Sbjct: 2 RIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLR 36 >6AZ0-A nrPDB Length = 439 Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 3 LP-NILLTGTPGVGKTTLGKELASKSGLKY 31 LP +LLTG PG GKT L + A ++G+ + Sbjct: 35 LPKGVLLTGPPGTGKTLLARATAGEAGVDF 64 >5ZQM-A nrPDB Length = 309 Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 18/31 (58%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +L+ G PG GKT L K +A++ + NV Sbjct: 64 GVLMVGPPGTGKTLLAKAVATECKTTFFNVS 94 >3CM0-A nrPDB Length = 186 Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE 40 ++ G PG GK T LA + G K ++ GD+ R+ Sbjct: 7 VIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRD 41 >4NP6-A nrPDB Length = 217 Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 20/35 (57%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 I+L G PG GK T + + K G+ I+ GD+ R Sbjct: 5 RIILLGAPGAGKGTQAQFIMEKFGIPQISTGDMLR 39 >4XGU-A nrPDB Length = 424 Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust. Identities = 14/25 (56%), Positives = 17/25 (68%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK 30 ILLTG PG GKT+L K LA ++ Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIR 199 >2R65-A nrPDB Length = 268 Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +LL G PG GKT L K +A ++ + + ++G Sbjct: 46 GVLLVGPPGTGKTLLAKAVAGEAHVPFFSMG 76 >4L16-A nrPDB Length = 334 Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT +G+ +AS+ + N+ Sbjct: 91 GVLLFGPPGTGKTMIGRCVASQCKATFFNI 120 >6HE9-H nrPDB Length = 390 Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+++ +I V Sbjct: 169 GVLLYGPPGTGKTLLAKAVANQTRATFIRV 198 >2SHK-A nrPDB Length = 173 Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust. Identities = 12/28 (42%), Positives = 19/28 (67%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYIN 33 I + G G GKTT+G+ELA G ++++ Sbjct: 5 IFMVGARGCGKTTVGRELARALGYEFVD 32 >1IQP-A nrPDB Length = 327 Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 15/22 (68%) Query: 3 LPNILLTGTPGVGKTTLGKELA 24 +P++L G PGVGKTT LA Sbjct: 46 MPHLLFAGPPGVGKTTAALALA 67 >1UKY-A nrPDB Length = 203 Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 22/137 (16%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDG--YDEEY-DC----PILDE 58 I + G PG GK T ++L +++ GDL R EQ G Y E +C I+ + Sbjct: 18 IFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQ 77 Query: 59 DRVVDELDNQMREGGVIVDYHG--CDFFPERWFHIV----------FVLRTDT--NVLYE 104 + + L N + + V + H D FP + + F+L D +++ E Sbjct: 78 EITLALLRNAISD-NVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLE 136 Query: 105 RLETRGYNEKKLTDNIQ 121 RL RG + DNI+ Sbjct: 137 RLLERGKTSGRSDDNIE 153 >1OFI-A nrPDB Length = 310 Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 13/93 (13%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILD-EDRVVD 63 NIL+ G GVGKT + + LA + +I V E Y G +E D I D D Sbjct: 52 NILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVG--KEVDSIIRDLTDSAGG 109 Query: 64 ELDNQMREGGVIVD----------YHGCDFFPE 86 +D + G V +D Y G D E Sbjct: 110 AIDAVEQNGIVFIDEIDKICKKGEYSGADVSRE 142 >5UBV-A nrPDB Length = 246 Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 3 LP-NILLTGTPGVGKTTLGKELASKSGLKY 31 LP +LL G PG GKT L + +A ++G+ + Sbjct: 38 LPKGVLLVGPPGTGKTLLARAVAGEAGVPF 67 >5WVI-L nrPDB Length = 437 Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust. Identities = 13/28 (46%), Positives = 17/28 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYI 32 +LL G PG GKT L K +A+ G +I Sbjct: 217 GVLLYGPPGTGKTLLAKAVAATIGANFI 244 >6HE4-H nrPDB Length = 267 Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+++ +I V Sbjct: 55 GVLLYGPPGTGKTLLAKAVANQTRATFIRV 84 >6FVU-L nrPDB Length = 388 Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust. Identities = 13/28 (46%), Positives = 17/28 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYI 32 +LL G PG GKT L K +A+ G +I Sbjct: 169 GVLLYGPPGTGKTLLAKAVAATIGANFI 196 >6EF0-L nrPDB Length = 273 Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust. Identities = 13/28 (46%), Positives = 17/28 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYI 32 +LL G PG GKT L K +A+ G +I Sbjct: 54 GVLLYGPPGTGKTLLAKAVAATIGANFI 81 >1ZD8-A nrPDB Length = 227 Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 22/37 (59%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL 43 ++ G PG GK T+ + + LK+++ GDL R+ L Sbjct: 11 VIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNML 47 >1IN6-A nrPDB Length = 334 Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 8/45 (17%) Query: 2 LLPNILLTGTPGVGKTTLGKELASK--------SGLKYINVGDLA 38 +L ++LL G PG+G+TTL +AS+ SG + GD+A Sbjct: 50 VLDHVLLAGPPGLGRTTLAHIIASELQTNIHVTSGPVLVKQGDMA 94 >1E94-E nrPDB Length = 449 Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 NIL+ G GVGKT + + LA + +I V Sbjct: 58 NILMIGPTGVGKTEIARRLAKLANAPFIKV 87 >5U6P-A nrPDB Length = 660 Score = 30.8 bits (68), Expect = 0.35, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 22/31 (70%) Query: 41 EQLYDGYDEEYDCPILDEDRVVDELDNQMRE 71 ++++D Y+ Y I DE+ +++EL++ +RE Sbjct: 429 QKIHDYYEHRYQGKIFDEENILNELNDPLRE 459 >1IM2-A nrPDB Length = 444 Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 NIL+ G GVGKT + + LA + +I V Sbjct: 52 NILMIGPTGVGKTEIARRLAKLANAPFIKV 81 >5Z6Q-A nrPDB Length = 392 Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 19/29 (65%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A++S + N+ Sbjct: 154 LLLFGPPGNGKTMLAKAVAAESNATFFNI 182 >5YCF-B nrPDB Length = 193 Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 22/36 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 I + G PG GK T +++ +K G +++ GDL R E Sbjct: 11 IFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLLRAE 46 >1Z83-A nrPDB Length = 196 Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 21/36 (58%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 I + G PG GK T +++ K G +++ GDL R E Sbjct: 12 IFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSE 47 >2CE7-A nrPDB Length = 476 Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT L + +A ++ + + ++ Sbjct: 51 GILLVGPPGTGKTLLARAVAGEANVPFFHI 80 >5VQ9-D nrPDB Length = 432 Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 17/25 (68%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK 30 +LL G PG GKT+L K LA K ++ Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIR 199 >1ZAK-A nrPDB Length = 222 Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 22/37 (59%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 ++++G P GK T + + +K L +I+ GDL R E Sbjct: 7 KVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAE 43 >5X6K-A nrPDB Length = 195 Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 22/36 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 I + G PG GK T +++ +K G +++ GDL R E Sbjct: 13 IFVVGGPGSGKGTQCEKVVAKYGYTHLSSGDLLRAE 48 >3ADK-A nrPDB Length = 195 Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 21/36 (58%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 I + G PG GK T +++ K G +++ GDL R E Sbjct: 12 IFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAE 47 >5T0C-AD nrPDB Length = 418 Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust. Identities = 12/29 (41%), Positives = 17/29 (58%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L K +A + +I V Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230 >2NZJ-A nrPDB Length = 175 Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 16/26 (61%) Query: 1 MLLPNILLTGTPGVGKTTLGKELASK 26 M L ++L G PGVGKT+L A K Sbjct: 2 MALYRVVLLGDPGVGKTSLASLFAGK 27 >5WVI-K nrPDB Length = 428 Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+ + +I V Sbjct: 209 VLLYGPPGTGKTMLVKAVANSTKAAFIRV 237 >1LV7-A nrPDB Length = 257 Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust. Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 16/81 (19%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG-----------DLAREEQLYDGYDEEYDC 53 +L+ G PG GKT L K +A ++ + + + +R +++ + C Sbjct: 47 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPC 106 Query: 54 PILDEDRVVDELDNQMREGGV 74 I +DE+D R+ G Sbjct: 107 IIF-----IDEIDAVGRQRGA 122 >1KAG-A nrPDB Length = 173 Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust. Identities = 11/27 (40%), Positives = 19/27 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKY 31 NI L G G GK+T+G++LA + +++ Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMEF 32 >6EF1-K nrPDB Length = 276 Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+ + +I V Sbjct: 57 VLLYGPPGTGKTMLVKAVANSTKAAFIRV 85 >3H0K-A nrPDB Length = 178 Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE 40 IL+TG PG GK+ K L + G K I + D+ R+ Sbjct: 3 ILITGMPGSGKSEFAK-LLKERGAKVIVMSDVVRK 36 >6CHS-H nrPDB Length = 819 Score = 30.0 bits (66), Expect = 0.57, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRV---- 61 +L G PG GKT L K +A++ +I+V ++ G E I D+ R Sbjct: 531 VLFYGPPGTGKTMLAKAVANECAANFISVKG-PELLSMWFGESESNIRDIFDKARAAAPC 589 Query: 62 ---VDELDNQMR-EGGVIVDYHG 80 +DELD+ + GG I D G Sbjct: 590 VVFLDELDSIAKARGGSIGDAGG 612 Score = 27.7 bits (60), Expect = 2.9, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 17/23 (73%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 +LL G PG GKT + + +A+++G Sbjct: 257 VLLYGPPGTGKTLMARAVANETG 279 >5KWA-A nrPDB Length = 497 Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV-GDLAREEQLY 44 +LL G PG GKT + K +A+ K V GD A E + Y Sbjct: 183 GVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSY 223 >5VHN-D nrPDB Length = 262 Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L K +A + +I V Sbjct: 57 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 86 >2BBW-A nrPDB Length = 246 Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLARE 40 ++ G PG GK T+ + +A GL++++ G RE Sbjct: 31 VILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRE 64 >6MAT-A nrPDB Length = 813 Score = 29.6 bits (65), Expect = 0.61, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT + K +A++S +I++ Sbjct: 538 ILLWGPPGCGKTLVAKAVANESKANFISI 566 Score = 27.7 bits (60), Expect = 2.8, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G G GKTTL +A G+ +I V Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSIGVAFIPV 267 >3R8C-A nrPDB Length = 228 Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 + + G G GK+++ KELA + G Y++ G + R Sbjct: 7 VAVDGPSGTGKSSVAKELARQLGASYLDTGAMYR 40 >5VFP-B nrPDB Length = 389 Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L K +A+++ ++ V Sbjct: 170 GVILYGPPGTGKTLLAKAVANQTSATFLRV 199 >1TEV-A nrPDB Length = 196 Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 21/37 (56%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ 42 + + G PG GK T + K G +++ G+L R+E+ Sbjct: 6 VFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDER 42 >5XZ2-A nrPDB Length = 196 Score = 29.6 bits (65), Expect = 0.65, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 22/36 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 + + G PG GK T +++ +K G +++ GDL R E Sbjct: 13 VFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLLRAE 48 >2AK3-A nrPDB Length = 226 Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 20/36 (55%) Query: 8 LTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL 43 + G PG GK T+ + LK+++ GDL R+ L Sbjct: 11 IMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNML 46 >6MSK-B nrPDB Length = 440 Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L K +A+++ ++ V Sbjct: 221 GVILYGPPGTGKTLLAKAVANQTSATFLRV 250 >1SXJ-B nrPDB Length = 323 Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 7/41 (17%) Query: 3 LPNILLTGTPGVGKTT----LGKELASKS---GLKYINVGD 36 +P+++++G PG+GKTT L EL +S G+ +N D Sbjct: 42 MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD 82 >3GMT-A nrPDB Length = 230 Score = 29.6 bits (65), Expect = 0.70, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 ++L G PG GK T + K G+ I+ GD+ R Sbjct: 10 RLILLGAPGAGKGTQANFIKEKFGIPQISTGDMLR 44 >5VHF-B nrPDB Length = 340 Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L K +A+++ ++ V Sbjct: 129 GVILYGPPGTGKTLLAKAVANQTSATFLRV 158 >6FVU-I nrPDB Length = 384 Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 165 GVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDG 207 >5VHO-B nrPDB Length = 267 Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L K +A+++ ++ V Sbjct: 55 GVILYGPPGTGKTLLAKAVANQTSATFLRV 84 >1D2N-A nrPDB Length = 272 Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust. Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 14/75 (18%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDL-------------AREEQLYDGYDE 49 L ++LL G P GKT L ++A +S +I + A ++ D Y Sbjct: 64 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKS 123 Query: 50 EYDCPILDE-DRVVD 63 + C ++D+ +R++D Sbjct: 124 QLSCVVVDDIERLLD 138 >2E87-A nrPDB Length = 357 Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 14/53 (26%) Query: 3 LPNILLTGTPGVGKTTLGKELASKS--------GLKYINVGDLAREEQLYDGY 47 +P +++ G P VGK+TL K L + + INVG Q DGY Sbjct: 167 IPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVG------QFEDGY 213 >6MDP-A nrPDB Length = 768 Score = 29.3 bits (64), Expect = 0.80, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 14/75 (18%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGD-------------LAREEQLYDGYDE 49 L ++LL G P GKT L ++A +S +I + A ++ D Y Sbjct: 560 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKS 619 Query: 50 EYDCPILDE-DRVVD 63 + C ++D+ +R++D Sbjct: 620 QLSCVVVDDIERLLD 634 >3JCO-J nrPDB Length = 405 Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L + +A + K+I V Sbjct: 184 GVILYGPPGTGKTLLARAVAHHTDCKFIRV 213 >3CF0-A nrPDB Length = 301 Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L G PG GKT L K +A++ +I++ Sbjct: 52 VLFYGPPGCGKTLLAKAIANECQANFISI 80 >4EUN-A nrPDB Length = 200 Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 60 ++++ G G GKTT+ +A ++GL++ E + + P+ DEDR Sbjct: 31 HVVVMGVSGSGKTTIAHGVADETGLEFAEADAFHSPENI---ATMQRGIPLTDEDR 83 >3JCP-I nrPDB Length = 437 Score = 29.3 bits (64), Expect = 1.00, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 218 GVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDG 260 >6EF2-J nrPDB Length = 262 Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L + +A + K+I V Sbjct: 41 GVILYGPPGTGKTLLARAVAHHTDCKFIRV 70 >6EF1-I nrPDB Length = 271 Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust. Identities = 10/30 (33%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L K +A+++ ++ + Sbjct: 52 GVILYGAPGTGKTLLAKAVANQTSATFLRI 81 >5EQT-A nrPDB Length = 257 Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + K LA + +I V Sbjct: 41 GVLLYGPPGCGKTLMAKALAHEVNATFIRV 70 >6EF0-H nrPDB Length = 257 Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT + +A+++ +I V Sbjct: 45 GILLYGPPGTGKTLCARAVANRTDATFIRV 74 >3UMF-A nrPDB Length = 217 Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 20/36 (55%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 I + G PG GK T ++L K +++ GDL R E Sbjct: 32 IFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAE 67 >6EF3-H nrPDB Length = 467 Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT + +A+++ +I V Sbjct: 245 GILLYGPPGTGKTLCARAVANRTDATFIRV 274 >5FHF-A nrPDB Length = 433 Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 15/24 (62%) Query: 5 NILLTGTPGVGKTTLGKELASKSG 28 N+ +TG G GKTT K L KSG Sbjct: 23 NVFVTGKAGSGKTTFLKYLIEKSG 46 >5HSW-A nrPDB Length = 488 Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 25 SKSGLKYINVGDLAREEQLYDGYDEEYD-CPILDEDRVVDELDNQMRE 71 SK ++Y+ +G L E YD+E++ CP + R + L N +RE Sbjct: 287 SKPAVEYVGLGKLPSESDYLVAYDQEWEACP--RKKRKLTPLHNLIRE 332 >6NYV-B nrPDB Length = 314 Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A++ ++N+ Sbjct: 74 GLLLFGPPGNGKTLLARAVATECSATFLNI 103 >3HU1-A nrPDB Length = 489 Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 17/24 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSG 28 ILL G PG GKT + + +A+++G Sbjct: 240 GILLYGPPGTGKTLIARAVANETG 263 >3WHK-A nrPDB Length = 270 Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + K +A + +I V Sbjct: 53 GVLLYGPPGCGKTLMAKAIAHEVNATFIRV 82 >5VFU-A nrPDB Length = 361 Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + +A+++ +I V Sbjct: 139 GVLLFGPPGTGKTLCARAVANRTDACFIRV 168 >2GA8-A nrPDB Length = 359 Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust. Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKY 31 ++L G+PG GK+T+ +EL KY Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKY 52 >5M32-h nrPDB Length = 355 Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A + +I V Sbjct: 148 GVLLYGPPGTGKTLLARAVAHHTDCTFIRV 177 >6MSD-E nrPDB Length = 403 Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust. Identities = 12/28 (42%), Positives = 17/28 (60%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINV 34 LL G PG GKT L + +AS+ ++ V Sbjct: 185 LLYGPPGTGKTLLARAVASQLDCNFLKV 212 >5GJQ-J nrPDB Length = 406 Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A + +I V Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRV 214 >6AP1-A nrPDB Length = 519 Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GK+ L K +A+++ + +V Sbjct: 69 GILLYGPPGTGKSYLAKAVATEANSTFFSV 98 >5VHP-E nrPDB Length = 262 Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust. Identities = 12/28 (42%), Positives = 17/28 (60%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINV 34 LL G PG GKT L + +AS+ ++ V Sbjct: 44 LLYGPPGTGKTLLARAVASQLDCNFLKV 71 >5XMK-A nrPDB Length = 437 Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust. Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GK+ L K +A+++ + +V Sbjct: 169 ILLYGPPGTGKSYLAKAVATEANSTFFSV 197 >5VHO-A nrPDB Length = 267 Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + +A+++ +I V Sbjct: 54 GVLLFGPPGTGKTLCARAVANRTDACFIRV 83 >5VHP-C nrPDB Length = 266 Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A + +I V Sbjct: 56 GVLLYGPPGTGKTLLARAVAHHTDCTFIRV 85 >3EIH-A nrPDB Length = 340 Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GK+ L K +A+++ + +V Sbjct: 71 GILLYGPPGTGKSYLAKAVATEANSTFFSV 100 >5DN8-A nrPDB Length = 446 Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 20/41 (48%) Query: 2 LLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ 42 +LP I + G P VGK+TL L +V + R+ Q Sbjct: 4 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQ 44 >3GBG-A nrPDB Length = 276 Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 14/79 (17%) Query: 87 RWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQC------------EIFQVLYEE--A 132 RW I LRT+ +L + LE+RG ++L ++I+ +I Q+ Y+ A Sbjct: 187 RWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFA 246 Query: 133 TASYKEEIVHQLPSNKPEE 151 + SY + + P E Sbjct: 247 SVSYFSTVFKSTMNVAPSE 265 >6MCK-A nrPDB Length = 606 Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 ILL G PG GKT + + +A+++G Sbjct: 33 ILLYGPPGTGKTLIARAVANETG 55 Score = 27.3 bits (59), Expect = 3.2, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L G PG GKT L K +A++ +I++ Sbjct: 306 VLFYGPPGCGKTLLAKAIANECQANFISI 334 >5C18-A nrPDB Length = 785 Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 ILL G PG GKT + + +A+++G Sbjct: 240 ILLYGPPGTGKTLIARAVANETG 262 Score = 27.3 bits (59), Expect = 3.6, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L G PG GKT L K +A++ +I++ Sbjct: 513 VLFYGPPGCGKTLLAKAIANECQANFISI 541 >2I3B-A nrPDB Length = 189 Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust. Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%) Query: 5 NILLTGTPGVGKTTL---GKELASKSGL 29 ++ LTG PGVGKTTL E+ SG+ Sbjct: 3 HVFLTGPPGVGKTTLIHKASEVLKSSGV 30 >6EPC-H nrPDB Length = 433 Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + +A+++ +I V Sbjct: 211 GVLLFGPPGTGKTLCARAVANRTDACFIPV 240 >3TRF-A nrPDB Length = 185 Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 15/22 (68%) Query: 3 LPNILLTGTPGVGKTTLGKELA 24 L NI L G G GKT++G +LA Sbjct: 5 LTNIYLIGLMGAGKTSVGSQLA 26 >6EPG-B nrPDB Length = 401 Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 20/39 (51%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLY 44 I +TG PG G T+ K + + K + G LAR + + Sbjct: 105 IFVTGIPGSGATSTVKNMMMQDTTKLLFEGQLARPQSAF 143 >2QZ4-A nrPDB Length = 262 Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 19/29 (65%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVG 35 LL G PG GKT L K +A+++ + ++ + Sbjct: 43 LLLGPPGCGKTLLAKAVATEAQVPFLAMA 71 >3EPJ-A nrPDB Length = 409 Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 19/32 (59%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDL 37 I++ GT GVGK+ L +LA K + IN + Sbjct: 5 IVIAGTTGVGKSQLSIQLAQKFNGEVINSDSM 36 >1HQC-A nrPDB Length = 324 Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 19/27 (70%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGL 29 L ++LL G PG+GKTTL +A + G+ Sbjct: 38 LEHLLLFGPPGLGKTTLAHVIAHELGV 64 >4ZPX-A nrPDB Length = 413 Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust. Identities = 10/20 (50%), Positives = 15/20 (75%) Query: 5 NILLTGTPGVGKTTLGKELA 24 ++LL G PG GK+ LG+ +A Sbjct: 62 HVLLIGEPGTGKSMLGQAMA 81 >4LCB-A nrPDB Length = 367 Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 ILL G PG GKT L +A++ +I+V D A + G E+ I + R + Sbjct: 133 ILLYGPPGNGKTMLAAAVANEIDSYFIHV-DAASIMSKWLGEAEKNVAKIFNTAREYSKK 191 Query: 66 DNQ 68 DN+ Sbjct: 192 DNK 194 >4D81-A nrPDB Length = 283 Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 ILL G PG GKT + +A++ ++I+V D A + G E+ I R + + Sbjct: 48 ILLYGPPGCGKTMIAAAVANELDSEFIHV-DAASIMSKWLGEAEKNVAKIFKTARELSKK 106 Query: 66 DNQ 68 +N+ Sbjct: 107 ENK 109 >6QI8-A nrPDB Length = 456 Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK 30 +LL G PG GKT L +A + G K Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSK 90 >2XSZ-A nrPDB Length = 367 Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK 30 +LL G PG GKT L +A + G K Sbjct: 80 VLLAGPPGTGKTALALAIAQELGSK 104 >6G12-A nrPDB Length = 301 Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust. Identities = 12/36 (33%), Positives = 22/36 (61%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ 42 ++ G P VGK+TL +LA +S + N + +++Q Sbjct: 131 MIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQ 166 >1VIA-A nrPDB Length = 175 Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust. Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 2 LLPNILLTGTPGVGKTTLGKELA 24 L NI+ G G GK+TL + LA Sbjct: 3 LAKNIVFIGFMGSGKSTLARALA 25 >2PNF-A nrPDB Length = 248 Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 9/75 (12%) Query: 4 PNILLTGTPGVGKTTLGKELASKSGLKYINV-GDLAREEQLYDGYDEEYDCPILDEDRVV 62 +++TGT G + +E+A+K G+K V +L EE + ++E Y+ +V Sbjct: 32 STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN--------LV 83 Query: 63 DELDNQMREGGVIVD 77 D +D + G+ D Sbjct: 84 DGIDILVNNAGITRD 98 >3K1J-A nrPDB Length = 604 Score = 26.9 bits (58), Expect = 5.0, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 15/20 (75%) Query: 5 NILLTGTPGVGKTTLGKELA 24 ++LL G PG GK+ LG+ +A Sbjct: 62 HVLLIGEPGTGKSMLGQAMA 81 >5D4W-A nrPDB Length = 926 Score = 26.6 bits (57), Expect = 5.4, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 16/22 (72%) Query: 5 NILLTGTPGVGKTTLGKELASK 26 N +L G PGVGKTT+ + LA + Sbjct: 218 NPVLIGEPGVGKTTIVEGLAQR 239 >2YVU-A nrPDB Length = 186 Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust. Identities = 11/19 (57%), Positives = 13/19 (68%) Query: 6 ILLTGTPGVGKTTLGKELA 24 + LTG PG GKTT+ LA Sbjct: 16 VWLTGLPGSGKTTIATRLA 34 >6BLB-A nrPDB Length = 355 Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 8/44 (18%) Query: 3 LPNILLTGTPGVGKTTL--------GKELASKSGLKYINVGDLA 38 L + L+ G PG+GKTTL G + S SG GDLA Sbjct: 59 LDHTLIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLA 102 >3PVS-A nrPDB Length = 447 Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 6/47 (12%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDE 49 L +++L G PG GKTTL + +A +Y N D+ R + G E Sbjct: 50 LHSMILWGPPGTGKTTLAEVIA-----RYANA-DVERISAVTSGVKE 90 >1RPZ-A nrPDB Length = 301 Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 6 ILLTGTPGVGKTTLGKELASKS-GLKYINVGDLAREEQLYDGYDE 49 IL G PG GK+T +E +K+ G IN D + ++ DE Sbjct: 5 ILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDE 49 >5FM7-A nrPDB Length = 464 Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust. Identities = 11/26 (42%), Positives = 15/26 (57%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLK 30 +LL G PG GKT L ++ + G K Sbjct: 68 GVLLAGGPGTGKTALALAISQELGTK 93 >1SXJ-C nrPDB Length = 340 Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 23/73 (31%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILD----E 58 LP++L G PG GKT+ + LARE Y + Y +L+ + Sbjct: 46 LPHLLFYGPPGTGKTS--------------TIVALARE-----IYGKNYSNMVLELNASD 86 Query: 59 DRVVDELDNQMRE 71 DR +D + NQ+++ Sbjct: 87 DRGIDVVRNQIKD 99 >2AK2-A nrPDB Length = 233 Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 18/33 (54%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 +L G PG GK T +LA + ++ GD+ R Sbjct: 20 VLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLR 52 >2GRJ-A nrPDB Length = 192 Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust. Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE--EQLYDGYDEEYDCPILDEDRVVD 63 I +TG G GK+T+ + L +K G +NV + E E++ + E + +L++ +V Sbjct: 15 IGVTGKIGTGKSTVCEILKNKYGAHVVNVDRIGHEVLEEVKEKLVELFGGSVLEDGKV-- 72 Query: 64 ELDNQMREGGVI 75 N+ + G++ Sbjct: 73 ---NRKKLAGIV 81 >3PXG-A nrPDB Length = 468 Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 5 NILLTGTPGVGKTTLGKELASK 26 N +L G PGVGKT + + LA + Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQ 224 >2AKY-A nrPDB Length = 220 Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust. Identities = 11/36 (30%), Positives = 18/36 (50%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 ++L G PG GK T L + ++ GD+ R + Sbjct: 7 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQ 42 >6B5D-A nrPDB Length = 309 Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 6 ILLTGTPGVGKTTLGKELAS 25 ++L G PG GKT + + +AS Sbjct: 66 MVLAGPPGTGKTLIARAIAS 85 >5WC0-A nrPDB Length = 472 Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 6 ILLTGTPGVGKTTLGKELAS 25 ++L G PG GKT + + +AS Sbjct: 229 MVLAGPPGTGKTLIARAIAS 248 >2EXH-A nrPDB Length = 535 Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust. Identities = 11/34 (32%), Positives = 18/34 (52%) Query: 23 LASKSGLKYINVGDLAREEQLYDGYDEEYDCPIL 56 L ++ G +Y + +AR LY Y+ D P+L Sbjct: 201 LTAEGGTRYNHAATIARSTSLYGPYEVHPDNPLL 234 >3E0M-A nrPDB Length = 313 Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query: 80 GCDFFPERWF-HIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKE 138 GC + E +F I VL T ++ET Y K TD+ E QV+Y+E S +E Sbjct: 10 GCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDH--AETVQVIYDEKEVSLRE 67 Query: 139 EIVH 142 +++ Sbjct: 68 ILLY 71 >3R20-A nrPDB Length = 233 Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL 43 + + G G GK+++ + LA G +Y++ G + R L Sbjct: 12 VAVDGPAGTGKSSVSRGLARALGARYLDTGAMYRIATL 49 >3LGA-A nrPDB Length = 253 Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Query: 43 LYDGYDEE-YDCPILD---EDRVVDELDNQMREGGVIVDYHGCD 82 +Y+G +EE D ILD +RVV+ ++ GG V Y C Sbjct: 154 IYEGIEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTPCS 197 >6E11-1 nrPDB Length = 906 Score = 26.2 bits (56), Expect = 8.3, Method: Compositional matrix adjust. Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 7/39 (17%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKY-INVGDLAREEQLY 44 +L G PG GKTT+ + GL Y I GD+ +E Q Y Sbjct: 232 VLVGNPGTGKTTIVE------GLVYRIEKGDVPKELQGY 264 >5C1S-A nrPDB Length = 391 Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust. Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 22/65 (33%) Query: 6 ILLTGTPGVGKTTL-----------GKELASK-----SGLKYINVGDLAREEQL------ 43 +L+ G+ GVGKTTL G+E K + I++ D+A ++ Sbjct: 65 LLVVGSSGVGKTTLCDCFFESHQSQGEETREKHVQIDNDFIRISISDIAGQQSFYACDNP 124 Query: 44 YDGYD 48 YDGYD Sbjct: 125 YDGYD 129 >1ASO-A nrPDB Length = 552 Score = 25.8 bits (55), Expect = 9.1, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 15/22 (68%) Query: 59 DRVVDELDNQMREGGVIVDYHG 80 D VV EL N++ GV++ +HG Sbjct: 42 DSVVVELTNKLHTEGVVIHWHG 63 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5JZV-A nrPDB 279 5e-76 3IIK-A nrPDB 273 2e-74 1Y63-A nrPDB 201 1e-52 4CVN-A nrPDB 181 1e-46 2X8A-A nrPDB 50 7e-07 Sequences not found previously or not previously below threshold: 5W0T-A nrPDB 50 6e-07 1QF9-A nrPDB 44 3e-05 2BBW-A nrPDB 43 8e-05 3SR0-A nrPDB 42 1e-04 3VAA-A nrPDB 42 2e-04 6MAT-A nrPDB 41 2e-04 1P4S-A nrPDB 40 5e-04 1Z83-A nrPDB 40 6e-04 3ADK-A nrPDB 40 7e-04 5VC7-A nrPDB 39 8e-04 5XZ2-A nrPDB 39 8e-04 5G4G-A nrPDB 39 0.001 3D8B-A nrPDB 39 0.001 6B5C-A nrPDB 39 0.001 3CF0-A nrPDB 39 0.001 6MCK-A nrPDB 39 0.001 6CHS-H nrPDB 38 0.001 6EF0-L nrPDB 38 0.001 5C18-A nrPDB 38 0.002 3BE4-A nrPDB 38 0.002 6AZ0-A nrPDB 38 0.002 1D2N-A nrPDB 38 0.002 6FVU-L nrPDB 38 0.002 5UBV-A nrPDB 38 0.002 4MKG-A nrPDB 38 0.002 5X6K-A nrPDB 38 0.003 5WVI-L nrPDB 38 0.003 5YCF-B nrPDB 37 0.003 3DL0-A nrPDB 37 0.003 2R65-A nrPDB 37 0.004 4D81-A nrPDB 37 0.004 6MDP-A nrPDB 37 0.004 5Z6Q-A nrPDB 37 0.004 5KWA-A nrPDB 37 0.004 3WHK-A nrPDB 37 0.005 5ZQM-A nrPDB 37 0.005 5EQT-A nrPDB 37 0.005 3M6A-A nrPDB 37 0.005 3CM0-A nrPDB 37 0.006 3H4M-A nrPDB 36 0.007 5VHO-B nrPDB 36 0.008 2BWJ-A nrPDB 36 0.008 1VIA-A nrPDB 36 0.008 3HU1-A nrPDB 36 0.009 2QZ4-A nrPDB 36 0.009 2IYT-A nrPDB 36 0.009 4NTZ-A nrPDB 36 0.009 6MSK-B nrPDB 36 0.010 5VHF-B nrPDB 36 0.010 5G3Y-A nrPDB 36 0.010 6HE4-H nrPDB 36 0.011 1LV7-A nrPDB 36 0.011 2P3S-A nrPDB 35 0.012 4PZL-A nrPDB 35 0.013 1UKY-A nrPDB 35 0.013 5VFP-B nrPDB 35 0.013 4Y0A-A nrPDB 35 0.013 6HE9-H nrPDB 35 0.013 5VHP-E nrPDB 35 0.016 6EF0-H nrPDB 35 0.016 3JCP-I nrPDB 35 0.016 4Z8X-A nrPDB 35 0.017 2SHK-A nrPDB 35 0.018 5VHN-D nrPDB 35 0.020 1IY1-A nrPDB 35 0.021 6EF1-I nrPDB 35 0.021 4QBG-B nrPDB 35 0.021 6FVU-I nrPDB 35 0.023 1SXJ-A nrPDB 35 0.023 6MSD-E nrPDB 35 0.023 6NYV-B nrPDB 35 0.025 6EF3-H nrPDB 34 0.025 2CE7-A nrPDB 34 0.027 5X6J-A nrPDB 34 0.028 3EIH-A nrPDB 34 0.029 6EF2-J nrPDB 34 0.031 6AP1-A nrPDB 34 0.032 2DHR-A nrPDB 34 0.033 5G41-A nrPDB 34 0.034 4EUN-A nrPDB 34 0.034 5XMK-A nrPDB 34 0.035 4LGM-A nrPDB 34 0.039 2XSZ-A nrPDB 34 0.040 6EF1-K nrPDB 34 0.041 5T0C-AD nrPDB 34 0.041 1HQC-A nrPDB 33 0.044 3JCO-J nrPDB 33 0.045 5M32-h nrPDB 33 0.052 5VHP-C nrPDB 33 0.053 1ZD8-A nrPDB 33 0.054 5WVI-K nrPDB 33 0.055 5VFU-A nrPDB 33 0.063 6QI8-A nrPDB 33 0.063 5GJQ-J nrPDB 33 0.065 4L16-A nrPDB 33 0.065 1ZIO-A nrPDB 33 0.066 5VHO-A nrPDB 33 0.067 1IN6-A nrPDB 33 0.075 6BLB-A nrPDB 33 0.076 4QBH-A nrPDB 33 0.080 2AK3-A nrPDB 33 0.083 5WC0-A nrPDB 33 0.086 1XWI-A nrPDB 33 0.089 6B5D-A nrPDB 33 0.094 4LCB-A nrPDB 32 0.11 4XGU-A nrPDB 32 0.11 3FB4-A nrPDB 32 0.11 6EPC-H nrPDB 32 0.12 5VQ9-D nrPDB 32 0.12 5VHO-F nrPDB 32 0.12 2ZAO-A nrPDB 32 0.12 1IQP-A nrPDB 32 0.12 3PXG-A nrPDB 32 0.13 3PXI-A nrPDB 32 0.15 5FM7-A nrPDB 32 0.15 5VFP-F nrPDB 32 0.16 5E7P-A nrPDB 32 0.19 5DN8-A nrPDB 32 0.19 6EF0-M nrPDB 32 0.20 6EPD-M nrPDB 32 0.20 4YPL-A nrPDB 32 0.20 4NP6-A nrPDB 32 0.20 4K46-A nrPDB 32 0.20 2VP0-A nrPDB 31 0.22 1YE8-A nrPDB 31 0.22 2C9Y-A nrPDB 31 0.23 3GMT-A nrPDB 31 0.23 4AKE-A nrPDB 31 0.25 4YPN-A nrPDB 31 0.33 3PVS-A nrPDB 31 0.34 3L0S-A nrPDB 31 0.35 1TEV-A nrPDB 30 0.39 3UMF-A nrPDB 30 0.40 5A5B-M nrPDB 30 0.41 2CHG-A nrPDB 30 0.52 3J3U-A nrPDB 30 0.60 1SXJ-C nrPDB 30 0.66 4I5O-A nrPDB 30 0.68 2AK2-A nrPDB 30 0.71 2CHV-A nrPDB 30 0.75 2GKS-A nrPDB 30 0.76 1ZAK-A nrPDB 30 0.76 1SXJ-B nrPDB 30 0.78 1OFI-A nrPDB 30 0.80 1E94-E nrPDB 29 0.82 2NZJ-A nrPDB 29 1.0 1SW7-A nrPDB 29 1.0 3H0K-A nrPDB 29 1.1 2I3B-A nrPDB 29 1.1 2AKY-A nrPDB 29 1.2 1NKS-A nrPDB 29 1.3 1IM2-A nrPDB 28 1.4 2Q1T-A nrPDB 28 1.7 1SXJ-D nrPDB 28 1.7 4POC-A nrPDB 28 1.7 4TKO-B nrPDB 28 1.7 3A4L-A nrPDB 28 1.7 5CWS-E nrPDB 28 1.8 2XSZ-D nrPDB 28 1.8 2JAQ-A nrPDB 28 1.8 4WW4-B nrPDB 28 1.9 6QI9-D nrPDB 28 2.0 6EPG-B nrPDB 28 2.2 3CRQ-A nrPDB 28 2.2 5BQ5-A nrPDB 28 2.3 5D4W-A nrPDB 28 2.3 5FHF-A nrPDB 28 2.4 3W34-A nrPDB 28 2.4 3GP8-A nrPDB 28 2.4 6GEJ-T nrPDB 28 2.6 1UM8-A nrPDB 28 2.6 1RPZ-A nrPDB 27 3.4 1NJG-A nrPDB 27 3.9 6EMW-E nrPDB 27 4.1 4ZPX-A nrPDB 27 4.6 3U5Z-B nrPDB 27 4.8 6D00-1 nrPDB 27 5.5 2GA8-A nrPDB 27 5.5 6GEJ-U nrPDB 27 5.6 3PFI-A nrPDB 27 5.8 5V8F-A nrPDB 27 5.9 6EM8-A nrPDB 27 6.1 3GLF-B nrPDB 27 6.2 3N98-A nrPDB 27 6.4 5ZLU-EE nrPDB 27 6.4 3EC2-A nrPDB 27 6.4 5XTD-w nrPDB 27 6.5 3K1J-A nrPDB 27 6.6 2YVU-A nrPDB 27 6.6 1KNX-A nrPDB 26 7.2 6E11-1 nrPDB 26 7.6 5B63-A nrPDB 26 7.8 2W0M-A nrPDB 26 8.0 2GRJ-A nrPDB 26 8.1 5LNK-k nrPDB 26 8.8 >5JZV-A nrPDB Length = 206 Score = 279 bits (713), Expect = 5e-76, Method: Composition-based stats. Identities = 171/172 (99%), Positives = 171/172 (99%) Query: 1 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 60 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR Sbjct: 35 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 94 Query: 61 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 120 VVDELDNQMREGGVIV YHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI Sbjct: 95 VVDELDNQMREGGVIVGYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 154 Query: 121 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 172 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS Sbjct: 155 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 206 >3IIK-A nrPDB Length = 180 Score = 273 bits (699), Expect = 2e-74, Method: Composition-based stats. Identities = 172/172 (100%), Positives = 172/172 (100%) Query: 1 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 60 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR Sbjct: 9 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 68 Query: 61 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 120 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI Sbjct: 69 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 128 Query: 121 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 172 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS Sbjct: 129 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHNS 180 >1Y63-A nrPDB Length = 184 Score = 201 bits (511), Expect = 1e-52, Method: Composition-based stats. Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 5/165 (3%) Query: 5 NILLTGTPGVGKTTLGKELASK-SGLKYINVGDLAREEQLYDGYDEEYDCPIL---DEDR 60 NIL+TGTPG GKT++ + +A++ G +++ VG L +E Y YD E D I+ DEDR Sbjct: 12 NILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDR 71 Query: 61 VVDELDNQM-REGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDN 119 ++D ++ M G +VDYH + FPERWFH+V VL T T VL+ERL R Y+E K +N Sbjct: 72 LLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVVVLHTSTEVLFERLTKRQYSEAKRAEN 131 Query: 120 IQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIE 164 ++ EI + EEA +Y+++IV ++ E++ V++I + +E Sbjct: 132 MEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAATVEEIRERVE 176 >4CVN-A nrPDB Length = 191 Score = 181 bits (459), Expect = 1e-46, Method: Composition-based stats. Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 9/163 (5%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 I +TGTPGVGKTT+ K LA K G +Y+N+ D A E+ D E + I D + + Sbjct: 14 IAITGTPGVGKTTIAKLLAEKLGYEYVNLRDFALEKGCGREVDGEVEVEI---DELAYFV 70 Query: 66 DNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIF 125 + ++++ V++D H P +V VLR ++ ERL RGY+++K+ +N++ E+ Sbjct: 71 EKELKDRNVVLDGHLSHLMP---VDLVVVLRAHPRIIGERLRERGYSKEKIGENVEAELV 127 Query: 126 QVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIK 168 + EA ++ I + PEE+ V++I+ I+ +K Sbjct: 128 DAILIEAIDEHENVIEVDTTNKTPEEI---VEEIIGLIKSGVK 167 >5W0T-A nrPDB Length = 304 Score = 50.0 bits (118), Expect = 6e-07, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 6/75 (8%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRV--- 61 +LL G PG GKT L K LA +SG +I++ + ++ Y ++ D +++ Sbjct: 79 GVLLYGPPGCGKTMLAKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPC 138 Query: 62 ---VDELDNQMREGG 73 +DE+D+ +RE Sbjct: 139 IIFIDEIDSFLRERS 153 >2X8A-A nrPDB Length = 274 Score = 49.6 bits (117), Expect = 7e-07, Method: Composition-based stats. Identities = 16/31 (51%), Positives = 22/31 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +LL G PG GKT L K +A++SGL +I+V Sbjct: 46 GVLLAGPPGCGKTLLAKAVANESGLNFISVK 76 >1QF9-A nrPDB Length = 194 Score = 44.3 bits (103), Expect = 3e-05, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 27/185 (14%) Query: 4 PNIL-LTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV 62 PN++ + G PG GK T + G +++ GDL R+EQ D E ++ +V Sbjct: 6 PNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIV 65 Query: 63 DELDNQMREGGVIVDYHGCDF----FP-------------ERWFHIVFVLRTD--TNVLY 103 + I G +F FP + + FVL D V+ Sbjct: 66 PSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMT 125 Query: 104 ERLETRGYNEKKLTDNIQC-----EIFQVLYEEATASYK--EEIVHQLPSNKPEELENNV 156 +RL RG + + DNI+ F V + Y +++ + E+ N+V Sbjct: 126 QRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYNDV 185 Query: 157 DQILK 161 + + K Sbjct: 186 ENLFK 190 >2BBW-A nrPDB Length = 246 Score = 42.7 bits (99), Expect = 8e-05, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 29/187 (15%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE-----QLYDGYDEEYDCPILDEDRV 61 ++ G PG GK T+ + +A GL++++ G RE ++ + + + +L D V Sbjct: 31 VILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHV 90 Query: 62 VDEL---DNQMREGGV-IVDYHGCDFFPERW-----------FHIVFVLRTDTNVLYERL 106 + L + + R G ++D FP +V L L +RL Sbjct: 91 ITRLMMSELENRRGQHWLLDG-----FPRTLGQAEALDKICEVDLVISLNIPFETLKDRL 145 Query: 107 ETRG-YNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQ 165 R + N+ F + E + Q +KPE + + Q + Sbjct: 146 SRRWIHPPSGRVYNLD---FNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP 202 Query: 166 WIKDHNS 172 I+ + S Sbjct: 203 VIELYKS 209 >3SR0-A nrPDB Length = 206 Score = 41.9 bits (97), Expect = 1e-04, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 27/174 (15%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE-----EQLYDGYDEEYDC-PILDED 59 ++ G PG GK T K LA + G +I+ GD+ RE L E + ++ +D Sbjct: 3 LVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDD 62 Query: 60 RVVDELDNQM-REGGVIVDYH---------GCDFFPERW--FHIVFVLRTDTNVLYERLE 107 ++ ++ + G VI D + ++ V + V+ ERL Sbjct: 63 LIIALIEEVFPKHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLS 122 Query: 108 TRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILK 161 R N + E++ V Y K V Q +KPE ++ ++ + Sbjct: 123 GRRINPET------GEVYHVKYNPPPPGVK---VIQREDDKPEVIKKRLEVYRE 167 >3VAA-A nrPDB Length = 199 Score = 41.6 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 20/175 (11%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDE-----------EYDCP 54 I LTG G GKTTLGK A K + +I++ D EE+ + E E + Sbjct: 28 IFLTGYMGAGKTTLGKAFARKLNVPFIDL-DWYIEERFHKTVGELFTERGEAGFRELERN 86 Query: 55 ILDEDRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEK 114 +L E V + + + GG ++ F R VF L +VL+ RL Sbjct: 87 MLHE--VAEFENVVISTGGGAPCFYDNMEFMNRTGKTVF-LNVHPDVLFRRLRIAKQQRP 143 Query: 115 KLTDNIQCEIFQVLYE--EATASYKEEIVHQLPSNKPE---ELENNVDQILKWIE 164 L E+ + + E A + + + +++ E ++E++V ++ + +E Sbjct: 144 ILQGKEDDELMDFIIQALEKRAPFYTQAQYIFNADELEDRWQIESSVQRLQELLE 198 >6MAT-A nrPDB Length = 813 Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 20/31 (64%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 ILL G PG GKT + K +A++S +I++ Sbjct: 537 GILLWGPPGCGKTLVAKAVANESKANFISIK 567 Score = 34.6 bits (78), Expect = 0.022, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G G GKTTL +A G+ +I V Sbjct: 238 GVLLHGPSGCGKTTLAHAIAGSIGVAFIPV 267 >1P4S-A nrPDB Length = 181 Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 21/126 (16%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE-QLYDGYDEEYDCPILDEDRVVDE 64 +LL G PG GK T +LA K G+ I+ G+L R + E + D V + Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSD 62 Query: 65 LDNQMRE---------GGVIVDYH---------GCDFFPERWFHIVFVL--RTDTNVLYE 104 L N++ + G I+D + + R I VL R VL E Sbjct: 63 LTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLE 122 Query: 105 RLETRG 110 RL+ RG Sbjct: 123 RLKGRG 128 >1Z83-A nrPDB Length = 196 Score = 40.0 bits (92), Expect = 6e-04, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 18/134 (13%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV--- 62 I + G PG GK T +++ K G +++ GDL R E + I+++ ++V Sbjct: 12 IFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLE 71 Query: 63 ---DELDNQM-----REGGVIVDYHGCDFFPERWFH-------IVFVLRTDTNVLYERLE 107 D L + M G ++D + + F ++ + + +RL Sbjct: 72 TVLDMLRDAMVAKVNTSKGFLIDGYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLL 131 Query: 108 TRGYNEKKLTDNIQ 121 RG ++ DN + Sbjct: 132 KRGETSGRVDDNEE 145 >3ADK-A nrPDB Length = 195 Score = 39.6 bits (91), Expect = 7e-04, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 18/134 (13%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV--- 62 I + G PG GK T +++ K G +++ GDL R E + I+++ ++V Sbjct: 12 IFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLE 71 Query: 63 ---DELDNQM-----REGGVIVDYHGCDFFPERWFH-------IVFVLRTDTNVLYERLE 107 D L + M G ++D + + F ++ + + +RL Sbjct: 72 TVLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPETMTKRLL 131 Query: 108 TRGYNEKKLTDNIQ 121 RG ++ DN + Sbjct: 132 KRGETSGRVDDNEE 145 >5VC7-A nrPDB Length = 564 Score = 39.2 bits (90), Expect = 8e-04, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 21/30 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT + + +A++SG ++++ Sbjct: 45 GVILYGPPGTGKTLIARAVANESGANFLSI 74 Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 20/31 (64%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 LL G PGVGKT L K +A++S +I++ Sbjct: 322 GFLLYGPPGVGKTLLAKAVATESNANFISIK 352 >5XZ2-A nrPDB Length = 196 Score = 39.2 bits (90), Expect = 8e-04, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 73/187 (39%), Gaps = 28/187 (14%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR-EEQLYDGYDEEYDC-----PILDED 59 + + G PG GK T +++ +K G +++ GDL R E ++ ++ D Sbjct: 13 VFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLLRAEVASGSERGKQLQAIMQKGELVPLD 72 Query: 60 RVVDELDNQMREGGVIVDYHGCDFFPERWFH------------IVFVLRTDTNVLYERLE 107 V+D + + M + + D +P ++ + + +RL Sbjct: 73 TVLDMIKDAMIAKADVSKGYLIDGYPREVKQGEEFEKKIGAPALLLYIDAKGETMVKRLM 132 Query: 108 TRGYNEKKLTDNIQC-----EIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKW 162 RG + DN + +++ E A Y++ + + ++ E VD++ Sbjct: 133 KRGETSGRADDNEETIKKRLDLYYKATEPVIAFYEQRGIVRKINS-----ELPVDEVFAI 187 Query: 163 IEQWIKD 169 +E+ I + Sbjct: 188 VEKAIDE 194 >5G4G-A nrPDB Length = 721 Score = 39.2 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 21/30 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT + + +A++SG ++++ Sbjct: 221 GVILYGPPGTGKTLIARAVANESGANFLSI 250 Score = 37.7 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 20/31 (64%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 LL G PGVGKT L K +A++S +I++ Sbjct: 498 GFLLYGPPGVGKTLLAKAVATESNANFISIK 528 >3D8B-A nrPDB Length = 357 Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 15/30 (50%), Positives = 21/30 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT +GK +AS+SG + ++ Sbjct: 119 GILLFGPPGTGKTLIGKCIASQSGATFFSI 148 >6B5C-A nrPDB Length = 307 Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR---- 60 +L+ G PG GKT L K +A++ G + NV + Y G E+ + + R Sbjct: 60 GVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSK-YRGESEKLVRLLFEMARFYAP 118 Query: 61 ---VVDELDNQMREGG 73 +D++D+ G Sbjct: 119 TTIFIDQIDSICSRRG 134 >3CF0-A nrPDB Length = 301 Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +L G PG GKT L K +A++ +I++ Sbjct: 51 GVLFYGPPGCGKTLLAKAIANECQANFISIK 81 >6MCK-A nrPDB Length = 606 Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +L G PG GKT L K +A++ +I++ Sbjct: 305 GVLFYGPPGCGKTLLAKAIANECQANFISIK 335 Score = 36.5 bits (83), Expect = 0.006, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 17/24 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSG 28 ILL G PG GKT + + +A+++G Sbjct: 32 GILLYGPPGTGKTLIARAVANETG 55 >6CHS-H nrPDB Length = 819 Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR---- 60 +L G PG GKT L K +A++ +I+V + + I D+ R Sbjct: 530 GVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIR-DIFDKARAAAP 588 Query: 61 ---VVDELDNQMREGG 73 +DELD+ + G Sbjct: 589 CVVFLDELDSIAKARG 604 Score = 36.5 bits (83), Expect = 0.006, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 17/24 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSG 28 +LL G PG GKT + + +A+++G Sbjct: 256 GVLLYGPPGTGKTLMARAVANETG 279 >6EF0-L nrPDB Length = 273 Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEE 50 +LL G PG GKT L K +A+ G +I + + D Y E Sbjct: 54 GVLLYGPPGTGKTLLAKAVAATIGANFI----FSPASGIVDKYIGE 95 >5C18-A nrPDB Length = 785 Score = 38.5 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 18/31 (58%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +L G PG GKT L K +A++ +I++ Sbjct: 512 GVLFYGPPGCGKTLLAKAIANECQANFISIK 542 Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 17/24 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSG 28 ILL G PG GKT + + +A+++G Sbjct: 239 GILLYGPPGTGKTLIARAVANETG 262 >3BE4-A nrPDB Length = 217 Score = 38.5 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE-----EQLYDGYDEEYDCPILDED 59 N++L G PG GK T + + + GL +++ GD+ RE ++ + D Sbjct: 7 NLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNGTKIGLEAKSIIESGNFVGD 66 Query: 60 RVVDELDNQMREGGVIVDYHGCDFFP 85 +V L + + GV V+ D FP Sbjct: 67 EIVLGLVKEKFDLGVCVNGFVLDGFP 92 >6AZ0-A nrPDB Length = 439 Score = 38.5 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 18/27 (66%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKY 31 +LLTG PG GKT L + A ++G+ + Sbjct: 38 GVLLTGPPGTGKTLLARATAGEAGVDF 64 >1D2N-A nrPDB Length = 272 Score = 38.1 bits (87), Expect = 0.002, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGD-------------LAREEQLYDGYDE 49 L ++LL G P GKT L ++A +S +I + A ++ D Y Sbjct: 64 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKS 123 Query: 50 EYDCPILDE-DRVVDEL 65 + C ++D+ +R++D + Sbjct: 124 QLSCVVVDDIERLLDYV 140 >6FVU-L nrPDB Length = 388 Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEE 50 +LL G PG GKT L K +A+ G +I + + D Y E Sbjct: 169 GVLLYGPPGTGKTLLAKAVAATIGANFI----FSPASGIVDKYIGE 210 >5UBV-A nrPDB Length = 246 Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Query: 3 LP-NILLTGTPGVGKTTLGKELASKSGLKY 31 LP +LL G PG GKT L + +A ++G+ + Sbjct: 38 LPKGVLLVGPPGTGKTLLARAVAGEAGVPF 67 >4MKG-A nrPDB Length = 217 Score = 37.7 bits (86), Expect = 0.002, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 47/131 (35%), Gaps = 31/131 (23%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR-----EEQLYDGYDEEYDCPILDED 59 NI+L G PG GK T + + K G+ +I+ GD+ R E L D L D Sbjct: 2 NIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPD 61 Query: 60 RVV-----DELDNQMREGGVIVDYHGCDFFPE----------------RWFHIVFVLRTD 98 V + L E G ++D FP R V ++ D Sbjct: 62 EVTIGIVRERLSKSDCERGFLLDG-----FPRTVAQAEALEEILEEMGRPIDYVINIQVD 116 Query: 99 TNVLYERLETR 109 L ERL R Sbjct: 117 KEELMERLTGR 127 >5X6K-A nrPDB Length = 195 Score = 37.7 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 71/186 (38%), Gaps = 30/186 (16%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR-EEQLYDGYDEEYDC-----PILDED 59 I + G PG GK T +++ +K G +++ GDL R E ++ ++ D Sbjct: 13 IFVVGGPGSGKGTQCEKVVAKYGYTHLSSGDLLRAEVSSGSERGKQLQAIMQKGELVPLD 72 Query: 60 RVVDELDNQMREGGVIVDYHGCDFFPERWFH------------IVFVLRTDTNVLYERLE 107 V+D + + M + + D +P ++ + + +RL Sbjct: 73 TVLDMIKDAMIAKADVSKGYLIDGYPREVKQGEEFEKKIGKPCLLLYVDAKGETMVKRLM 132 Query: 108 TRGYNEKKLTDNIQC-----EIFQVLYEEATASYKEE-IVHQLPSNKPEELENNVDQILK 161 RG + DN + +++ E A Y+ IV ++ S P VD++ K Sbjct: 133 KRGETSGRADDNEETIKKRLDLYYKATEPVIAFYEGRGIVRKVDSELP------VDEVFK 186 Query: 162 WIEQWI 167 + I Sbjct: 187 QVSTAI 192 >5WVI-L nrPDB Length = 437 Score = 37.7 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEE 50 +LL G PG GKT L K +A+ G +I + + D Y E Sbjct: 217 GVLLYGPPGTGKTLLAKAVAATIGANFI----FSPASGIVDKYIGE 258 >5YCF-B nrPDB Length = 193 Score = 37.3 bits (85), Expect = 0.003, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 18/134 (13%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR-EEQLYDGYDEEYDC-----PILDED 59 I + G PG GK T +++ +K G +++ GDL R E ++ ++ D Sbjct: 11 IFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLLRAEVASGSERGKQLQAIMQKGELVPLD 70 Query: 60 RVVDELDNQM-----REGGVIVDYHGCDFFPERWFH-------IVFVLRTDTNVLYERLE 107 V+D + + M G ++D + + F ++ + + +RL Sbjct: 71 TVLDMIKDAMIAKADVSKGFLIDGYPREVKQGEEFEKKIGKPCLLLYVDAKAETMVKRLL 130 Query: 108 TRGYNEKKLTDNIQ 121 RG + DN + Sbjct: 131 KRGETSGRSDDNEE 144 >3DL0-A nrPDB Length = 216 Score = 37.3 bits (85), Expect = 0.003, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 21/126 (16%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR-----EEQLYDGYDEEYDCPILDED 59 N++L G PG GK T G+ + K G+ +I+ GD+ R E L D L D Sbjct: 2 NLVLMGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPD 61 Query: 60 RVVDELDNQMREGGVIVDYHGCDFFPE----------------RWFHIVFVLRTDTNVLY 103 V + + D FP + V ++ D +VL Sbjct: 62 EVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEMGKPIDYVINIQVDKDVLM 121 Query: 104 ERLETR 109 ERL R Sbjct: 122 ERLTGR 127 >2R65-A nrPDB Length = 268 Score = 37.3 bits (85), Expect = 0.004, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG 35 +LL G PG GKT L K +A ++ + + ++G Sbjct: 46 GVLLVGPPGTGKTLLAKAVAGEAHVPFFSMG 76 >4D81-A nrPDB Length = 283 Score = 36.9 bits (84), Expect = 0.004, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT + +A++ ++I+V Sbjct: 47 GILLYGPPGCGKTMIAAAVANELDSEFIHV 76 >6MDP-A nrPDB Length = 768 Score = 36.9 bits (84), Expect = 0.004, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGD-------------LAREEQLYDGYDE 49 L ++LL G P GKT L ++A +S +I + A ++ D Y Sbjct: 560 LVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKS 619 Query: 50 EYDCPILDE-DRVVDEL 65 + C ++D+ +R++D + Sbjct: 620 QLSCVVVDDIERLLDYV 636 Score = 31.5 bits (70), Expect = 0.18, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 5 NILLTGTPGVGKTTLGKELA 24 ILL G PG GKT L +++ Sbjct: 279 GILLYGPPGCGKTLLARQIG 298 >5Z6Q-A nrPDB Length = 392 Score = 36.9 bits (84), Expect = 0.004, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 11/80 (13%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDG----------YDEEYDCP 54 +LL G PG GKT L K +A++S + N+ + + E Sbjct: 153 GLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPS 212 Query: 55 ILDEDRVVDELDNQMREGGV 74 I+ D V D L + REG Sbjct: 213 IIFIDEV-DSLLCERREGEH 231 >5KWA-A nrPDB Length = 497 Score = 36.9 bits (84), Expect = 0.004, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV-GDLAREEQLY 44 +LL G PG GKT + K +A+ K V GD A E + Y Sbjct: 183 GVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSY 223 >3WHK-A nrPDB Length = 270 Score = 36.9 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + K +A + +I V Sbjct: 53 GVLLYGPPGCGKTLMAKAIAHEVNATFIRV 82 >5ZQM-A nrPDB Length = 309 Score = 36.9 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR---- 60 +L+ G PG GKT L K +A++ + NV + Y G E+ + + R Sbjct: 64 GVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSK-YRGESEKLVRLLFEMARFYSP 122 Query: 61 ---VVDELDNQMREGG 73 +DE+D+ G Sbjct: 123 ATIFIDEIDSICSRRG 138 >5EQT-A nrPDB Length = 257 Score = 36.9 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + K LA + +I V Sbjct: 41 GVLLYGPPGCGKTLMAKALAHEVNATFIRV 70 >3M6A-A nrPDB Length = 543 Score = 36.9 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 20/31 (64%) Query: 4 PNILLTGTPGVGKTTLGKELASKSGLKYINV 34 P + L G PGVGKT+L K +A G K++ + Sbjct: 109 PILCLAGPPGVGKTSLAKSIAKSLGRKFVRI 139 >3CM0-A nrPDB Length = 186 Score = 36.5 bits (83), Expect = 0.006, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 13/88 (14%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 ++ G PG GK T LA + G K ++ GD+ R+ + + + + Sbjct: 7 VIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRD-------------HVARGTPLGERV 53 Query: 66 DNQMREGGVIVDYHGCDFFPERWFHIVF 93 M G ++ D + E V Sbjct: 54 RPIMERGDLVPDDLILELIREELAERVI 81 >3H4M-A nrPDB Length = 285 Score = 36.2 bits (82), Expect = 0.007, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT L K +A+++ +I V Sbjct: 53 GILLYGPPGTGKTLLAKAVATETNATFIRV 82 >5VHO-B nrPDB Length = 267 Score = 36.2 bits (82), Expect = 0.008, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 55 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 97 >2BWJ-A nrPDB Length = 199 Score = 36.2 bits (82), Expect = 0.008, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 13/81 (16%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 I + G PG GK T ++L K G +++ G+L REE + E + Sbjct: 15 IFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREE-------------LASESERSKLI 61 Query: 66 DNQMREGGVIVDYHGCDFFPE 86 + M G ++ + E Sbjct: 62 RDIMERGDLVPSGIVLELLKE 82 >1VIA-A nrPDB Length = 175 Score = 36.2 bits (82), Expect = 0.008, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 69/168 (41%), Gaps = 13/168 (7%) Query: 2 LLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILD---- 57 L NI+ G G GK+TL + LA L +++ D E++ E ++ + Sbjct: 3 LAKNIVFIGFMGSGKSTLARALAKDLDLVFLD-SDFLIEQKFNQKVSEIFEQKRENFFRE 61 Query: 58 -EDRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKL 116 E ++ D + + + + L+ D L +RL+ +++ L Sbjct: 62 QEQKMADFFSS-CEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDEISKRPL 120 Query: 117 -TDNIQCEIFQVLYEEATASYKE--EIVHQLPSNKPEELENNVDQILK 161 D I+ + LY E + Y++ + + + +EL + + +++K Sbjct: 121 FYDEIKAK---KLYNERLSKYEQKANFILNIENKNIDELLSEIKKVIK 165 >3HU1-A nrPDB Length = 489 Score = 36.2 bits (82), Expect = 0.009, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 17/24 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSG 28 ILL G PG GKT + + +A+++G Sbjct: 240 GILLYGPPGTGKTLIARAVANETG 263 >2QZ4-A nrPDB Length = 262 Score = 35.8 bits (81), Expect = 0.009, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 LL G PG GKT L K +A+++ + ++ + Sbjct: 41 GALLLGPPGCGKTLLAKAVATEAQVPFLAM 70 >2IYT-A nrPDB Length = 184 Score = 35.8 bits (81), Expect = 0.009, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 7/64 (10%) Query: 2 LLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGY------DEEYDCPI 55 + P +L G PG GK+T+G+ LA G+ ++ D+A E++ D E + Sbjct: 1 MAPKAVLVGLPGSGKSTIGRRLAKALGVGLLDT-DVAIEQRTGRSIADIFATDGEQEFRR 59 Query: 56 LDED 59 ++ED Sbjct: 60 IEED 63 >4NTZ-A nrPDB Length = 217 Score = 35.8 bits (81), Expect = 0.009, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 29/175 (16%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVV-D 63 N+L+ G PG GK T ++ + + +I+ GD+ R +D+ +V D Sbjct: 7 NLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPD 66 Query: 64 ELDN----------QMREGGVIVDYH---------GCDFFPERWFHI--VFVLRTDTNVL 102 E+ N ++E G ++D + E + + + + + L Sbjct: 67 EVTNGIVKERLSQDDIKETGFLLDGYPRTIEQAHALDKTLAELGIELEGIINIEVNPDSL 126 Query: 103 YERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVD 157 ERL R + + E F ++ YKEE +Q +KPE ++ +D Sbjct: 127 LERLSGR------IIHRVTGETFHKVFNPPVD-YKEEDYYQREDDKPETVKRRLD 174 >6MSK-B nrPDB Length = 440 Score = 35.8 bits (81), Expect = 0.010, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 221 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 263 >5VHF-B nrPDB Length = 340 Score = 35.8 bits (81), Expect = 0.010, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 129 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 171 >5G3Y-A nrPDB Length = 226 Score = 35.8 bits (81), Expect = 0.010, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T +++ + G+ +I+ GD+ R Sbjct: 2 NLILLGPPGAGKGTQAEKIVEEYGIPHISTGDMFR 36 >6HE4-H nrPDB Length = 267 Score = 35.8 bits (81), Expect = 0.011, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+++ +I V Sbjct: 55 GVLLYGPPGTGKTLLAKAVANQTRATFIRV 84 >1LV7-A nrPDB Length = 257 Score = 35.8 bits (81), Expect = 0.011, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L K +A ++ + + + Sbjct: 47 GVLMVGPPGTGKTLLAKAIAGEAKVPFFTI 76 >2P3S-A nrPDB Length = 217 Score = 35.4 bits (80), Expect = 0.012, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 44/126 (34%), Gaps = 21/126 (16%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR-----EEQLYDGYDEEYDCPILDED 59 N++L G PG GK T G+ + G+ +I+ GD+ R E L D L D Sbjct: 2 NLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPD 61 Query: 60 RVVDELDNQMREGGVIVDYHGCDFFPE----------------RWFHIVFVLRTDTNVLY 103 V + + D FP + V + D +VL Sbjct: 62 EVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLM 121 Query: 104 ERLETR 109 ERL R Sbjct: 122 ERLTGR 127 >4PZL-A nrPDB Length = 242 Score = 35.4 bits (80), Expect = 0.013, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 41/121 (33%), Gaps = 17/121 (14%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE-----EQLYDGYDEEYDCPILDEDR 60 I+L G PG GK T K + K + +I+ GD+ RE L + D L D Sbjct: 27 IILLGAPGAGKGTQAKIIEQKYNIAHISTGDMIRETIKSGSALGQELKKVLDAGELVSDE 86 Query: 61 VVDELDNQMREGGVIVDYHGCDFFPERW------------FHIVFVLRTDTNVLYERLET 108 + ++ + D P + + N+L ER+ Sbjct: 87 FIIKIVKDRISKNDCNNGFLLDGVPRTIPQAQELDKLGVNIDYIVEVDVADNLLIERITG 146 Query: 109 R 109 R Sbjct: 147 R 147 >1UKY-A nrPDB Length = 203 Score = 35.4 bits (80), Expect = 0.013, Method: Composition-based stats. Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 22/138 (15%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ--LYDGYDEEY-----DCPILDE 58 I + G PG GK T ++L +++ GDL R EQ Y E + I+ + Sbjct: 18 IFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQ 77 Query: 59 DRVVDELDNQMREGGVIVDYH--GCDFFPERWFHIV----------FVLRTD--TNVLYE 104 + + L N + + V + H D FP + + F+L D +++ E Sbjct: 78 EITLALLRNAISD-NVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLE 136 Query: 105 RLETRGYNEKKLTDNIQC 122 RL RG + DNI+ Sbjct: 137 RLLERGKTSGRSDDNIES 154 >5VFP-B nrPDB Length = 389 Score = 35.4 bits (80), Expect = 0.013, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 170 GVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDG 212 >4Y0A-A nrPDB Length = 179 Score = 35.4 bits (80), Expect = 0.013, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 9/168 (5%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINV-GDLAREEQLYDGYDEEYDCPILDEDRV 61 LPNI L G G GKTT+G+ LA G ++++ ++ R+ + E + + R Sbjct: 8 LPNIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGATIPWIFEKEGEVGFRTRE 67 Query: 62 VDELDNQMREGGVIV--DYHGCDFFPERWF----HIVFVLRTDTNVLYERLETRGYNEKK 115 L+ +++ P R F IV L T + +R Sbjct: 68 TVVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTPVELQLQRTYRDKNRPLL 127 Query: 116 LTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWI 163 +N + ++ +L E+ H + +IL+ I Sbjct: 128 QVENPEQKLRDLLKI--RDPLYREVAHYTIETNQGAARDLAQKILQLI 173 >6HE9-H nrPDB Length = 390 Score = 35.4 bits (80), Expect = 0.013, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+++ +I V Sbjct: 169 GVLLYGPPGTGKTLLAKAVANQTRATFIRV 198 >5VHP-E nrPDB Length = 262 Score = 35.0 bits (79), Expect = 0.016, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 LL G PG GKT L + +AS+ ++ V Sbjct: 42 GCLLYGPPGTGKTLLARAVASQLDCNFLKV 71 >6EF0-H nrPDB Length = 257 Score = 35.0 bits (79), Expect = 0.016, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT + +A+++ +I V Sbjct: 45 GILLYGPPGTGKTLCARAVANRTDATFIRV 74 >3JCP-I nrPDB Length = 437 Score = 35.0 bits (79), Expect = 0.016, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 218 GVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDG 260 >4Z8X-A nrPDB Length = 497 Score = 35.0 bits (79), Expect = 0.017, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 21/30 (70%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PGVGKT L K +A ++ + +I+V Sbjct: 53 GVLLYGEPGVGKTLLAKAIAGEAHVPFISV 82 >2SHK-A nrPDB Length = 173 Score = 35.0 bits (79), Expect = 0.018, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 24/160 (15%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYIN------------VGDLAREEQL--YDGYDEEY 51 I + G G GKTT+G+ELA G ++++ V D+ E + + E Sbjct: 5 IFMVGARGCGKTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEA 64 Query: 52 DCPILDEDRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLET--R 109 + +RVV GG+++ F R V L L RL+ + Sbjct: 65 LQAVATPNRVV------ATGGGMVLLEQNRQFM--RAHGTVVYLFAPAEELALRLQASPQ 116 Query: 110 GYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKP 149 + LT E + + E A Y++ + + + +P Sbjct: 117 AHQRPTLTGRPIAEEMEAVLREREALYQDVAHYVVDATQP 156 >5VHN-D nrPDB Length = 262 Score = 34.6 bits (78), Expect = 0.020, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L K +A + +I V Sbjct: 57 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 86 >1IY1-A nrPDB Length = 254 Score = 34.6 bits (78), Expect = 0.021, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN 33 +LL G PGVGKT L + +A ++ + +I Sbjct: 51 GVLLVGPPGVGKTHLARAVAGEARVPFIT 79 >6EF1-I nrPDB Length = 271 Score = 34.6 bits (78), Expect = 0.021, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 52 GVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDG 94 >4QBG-B nrPDB Length = 217 Score = 34.6 bits (78), Expect = 0.021, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 10/84 (11%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR-----EEQLYDGYDEEYDCPILDED 59 NI+L G PG GK T + + +K G+ +I+ GD+ R E L D L D Sbjct: 2 NIVLMGLPGAGKGTQAERIVAKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPD 61 Query: 60 RVV-----DELDNQMREGGVIVDY 78 V + L E G ++D Sbjct: 62 EVTIGIVRERLSKSDCERGFLLDG 85 >6FVU-I nrPDB Length = 384 Score = 34.6 bits (78), Expect = 0.023, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN-VGDLAREEQLYDG 46 ++L G PG GKT L K +A+++ ++ VG ++ L DG Sbjct: 165 GVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDG 207 >1SXJ-A nrPDB Length = 516 Score = 34.6 bits (78), Expect = 0.023, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYIN 33 +L G PG+GKTT +A + G + Sbjct: 81 MLYGPPGIGKTTAAHLVAQELGYDILE 107 >6MSD-E nrPDB Length = 403 Score = 34.6 bits (78), Expect = 0.023, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 LL G PG GKT L + +AS+ ++ V Sbjct: 183 GCLLYGPPGTGKTLLARAVASQLDCNFLKV 212 >6NYV-B nrPDB Length = 314 Score = 34.6 bits (78), Expect = 0.025, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A++ ++N+ Sbjct: 74 GLLLFGPPGNGKTLLARAVATECSATFLNI 103 >6EF3-H nrPDB Length = 467 Score = 34.2 bits (77), Expect = 0.025, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT + +A+++ +I V Sbjct: 245 GILLYGPPGTGKTLCARAVANRTDATFIRV 274 >2CE7-A nrPDB Length = 476 Score = 34.2 bits (77), Expect = 0.027, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT L + +A ++ + + ++ Sbjct: 51 GILLVGPPGTGKTLLARAVAGEANVPFFHI 80 >5X6J-A nrPDB Length = 217 Score = 34.2 bits (77), Expect = 0.028, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 21/35 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 NI+L G PG GK T + K G+ +I+ GD+ R Sbjct: 2 NIVLMGLPGAGKGTQADRIVEKYGIPHISTGDMFR 36 >3EIH-A nrPDB Length = 340 Score = 34.2 bits (77), Expect = 0.029, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GK+ L K +A+++ + +V Sbjct: 71 GILLYGPPGTGKSYLAKAVATEANSTFFSV 100 >6EF2-J nrPDB Length = 262 Score = 34.2 bits (77), Expect = 0.031, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L + +A + K+I V Sbjct: 41 GVILYGPPGTGKTLLARAVAHHTDCKFIRV 70 >6AP1-A nrPDB Length = 519 Score = 34.2 bits (77), Expect = 0.032, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GK+ L K +A+++ + +V Sbjct: 69 GILLYGPPGTGKSYLAKAVATEANSTFFSV 98 >2DHR-A nrPDB Length = 499 Score = 33.9 bits (76), Expect = 0.033, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYIN 33 +LL G PGVGKT L + +A ++ + +I Sbjct: 66 GVLLVGPPGVGKTHLARAVAGEARVPFIT 94 >5G41-A nrPDB Length = 223 Score = 33.9 bits (76), Expect = 0.034, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T +++ K G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQAEKIVEKYGIPHISTGDMFR 36 >4EUN-A nrPDB Length = 200 Score = 33.9 bits (76), Expect = 0.034, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDR 60 +++ G G GKTT+ +A ++GL++ E + P+ DEDR Sbjct: 32 VVVMGVSGSGKTTIAHGVADETGLEFAEADAFHSPENIATMQRG---IPLTDEDR 83 >5XMK-A nrPDB Length = 437 Score = 33.9 bits (76), Expect = 0.035, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GK+ L K +A+++ + +V Sbjct: 168 GILLYGPPGTGKSYLAKAVATEANSTFFSV 197 >4LGM-A nrPDB Length = 295 Score = 33.9 bits (76), Expect = 0.039, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 5 NILLTGTPGVGKTTLGKELASK 26 ILL G PG GKT + +A++ Sbjct: 59 GILLYGPPGCGKTMIAAAVANE 80 >2XSZ-A nrPDB Length = 367 Score = 33.9 bits (76), Expect = 0.040, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK 30 +LL G PG GKT L +A + G K Sbjct: 80 VLLAGPPGTGKTALALAIAQELGSK 104 >6EF1-K nrPDB Length = 276 Score = 33.9 bits (76), Expect = 0.041, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+ + +I V Sbjct: 56 GVLLYGPPGTGKTMLVKAVANSTKAAFIRV 85 >5T0C-AD nrPDB Length = 418 Score = 33.9 bits (76), Expect = 0.041, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L K +A + +I V Sbjct: 201 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 230 >1HQC-A nrPDB Length = 324 Score = 33.5 bits (75), Expect = 0.044, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 19/28 (67%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLK 30 L ++LL G PG+GKTTL +A + G+ Sbjct: 38 LEHLLLFGPPGLGKTTLAHVIAHELGVN 65 >3JCO-J nrPDB Length = 405 Score = 33.5 bits (75), Expect = 0.045, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ++L G PG GKT L + +A + K+I V Sbjct: 184 GVILYGPPGTGKTLLARAVAHHTDCKFIRV 213 >5M32-h nrPDB Length = 355 Score = 33.5 bits (75), Expect = 0.052, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A + +I V Sbjct: 148 GVLLYGPPGTGKTLLARAVAHHTDCTFIRV 177 >5VHP-C nrPDB Length = 266 Score = 33.5 bits (75), Expect = 0.053, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A + +I V Sbjct: 56 GVLLYGPPGTGKTLLARAVAHHTDCTFIRV 85 >1ZD8-A nrPDB Length = 227 Score = 33.5 bits (75), Expect = 0.054, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 23/164 (14%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDELD 66 ++ G PG GK T+ + + LK+++ GDL R+ L +D+ +++ D Sbjct: 11 VIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFIDQGKLIP--D 68 Query: 67 NQMRE------GGVIVDYHGCDFFPER-----------WFHIVFVLRTDTNVLYERLETR 109 + M + D FP V L V+ +RL R Sbjct: 69 DVMTRLALHELKNLTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTAR 128 Query: 110 GYNEKK-LTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEEL 152 + NI+ F E + Q +KPE + Sbjct: 129 WIHPASGRVYNIE---FNPPKTVGIDDLTGEPLIQREDDKPETV 169 >5WVI-K nrPDB Length = 428 Score = 33.5 bits (75), Expect = 0.055, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L K +A+ + +I V Sbjct: 208 GVLLYGPPGTGKTMLVKAVANSTKAAFIRV 237 >5VFU-A nrPDB Length = 361 Score = 33.1 bits (74), Expect = 0.063, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + +A+++ +I V Sbjct: 139 GVLLFGPPGTGKTLCARAVANRTDACFIRV 168 >6QI8-A nrPDB Length = 456 Score = 33.1 bits (74), Expect = 0.063, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK 30 +LL G PG GKT L +A + G K Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSK 90 >5GJQ-J nrPDB Length = 406 Score = 33.1 bits (74), Expect = 0.065, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT L + +A + +I V Sbjct: 185 GVLLYGPPGTGKTLLARAVAHHTDCTFIRV 214 >4L16-A nrPDB Length = 334 Score = 33.1 bits (74), Expect = 0.065, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT +G+ +AS+ + N+ Sbjct: 91 GVLLFGPPGTGKTMIGRCVASQCKATFFNI 120 >1ZIO-A nrPDB Length = 217 Score = 33.1 bits (74), Expect = 0.066, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 23/35 (65%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T +++ + G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFR 36 >5VHO-A nrPDB Length = 267 Score = 33.1 bits (74), Expect = 0.067, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + +A+++ +I V Sbjct: 54 GVLLFGPPGTGKTLCARAVANRTDACFIRV 83 >1IN6-A nrPDB Length = 334 Score = 32.7 bits (73), Expect = 0.075, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 19/26 (73%) Query: 2 LLPNILLTGTPGVGKTTLGKELASKS 27 +L ++LL G PG+G+TTL +AS+ Sbjct: 50 VLDHVLLAGPPGLGRTTLAHIIASEL 75 >6BLB-A nrPDB Length = 355 Score = 32.7 bits (73), Expect = 0.076, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 20/39 (51%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 L + L+ G PG+GKTTL +A + G+ + E Sbjct: 59 LDHTLIFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLER 97 >4QBH-A nrPDB Length = 217 Score = 32.7 bits (73), Expect = 0.080, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 N++L G PG GK T + + G+ +I+ GD+ R Sbjct: 2 NLVLMGLPGAGKGTQAERIVEAYGIPHISTGDMFR 36 >2AK3-A nrPDB Length = 226 Score = 32.7 bits (73), Expect = 0.083, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 21/163 (12%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRV----- 61 + G PG GK T+ + LK+++ GDL R+ L +D+ ++ Sbjct: 10 AIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDDV 69 Query: 62 -----VDELDNQMREGGVIVDY------HGCDFFPERWFHIVFVLRTDTNVLYERLETRG 110 + EL N + + ++D V L V+ +RL R Sbjct: 70 MTRLVLHELKN-LTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTARW 128 Query: 111 -YNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEEL 152 + NI+ F E + Q ++PE + Sbjct: 129 IHPGSGRVYNIE---FNPPKTMGIDDLTGEPLVQREDDRPETV 168 >5WC0-A nrPDB Length = 472 Score = 32.7 bits (73), Expect = 0.086, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 6 ILLTGTPGVGKTTLGKELASK 26 ++L G PG GKT + + +AS+ Sbjct: 229 MVLAGPPGTGKTLIARAIASE 249 >1XWI-A nrPDB Length = 322 Score = 32.7 bits (73), Expect = 0.089, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 5 NILLTGTPGVGKTTLGKELASKS 27 ILL G PG GK+ L K +A+++ Sbjct: 47 GILLFGPPGTGKSYLAKAVATEA 69 >6B5D-A nrPDB Length = 309 Score = 32.7 bits (73), Expect = 0.094, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 6 ILLTGTPGVGKTTLGKELASK 26 ++L G PG GKT + + +AS+ Sbjct: 66 MVLAGPPGTGKTLIARAIASE 86 >4LCB-A nrPDB Length = 367 Score = 32.3 bits (72), Expect = 0.11, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 ILL G PG GKT L +A++ +I+V Sbjct: 132 GILLYGPPGNGKTMLAAAVANEIDSYFIHV 161 >4XGU-A nrPDB Length = 424 Score = 32.3 bits (72), Expect = 0.11, Method: Composition-based stats. Identities = 14/25 (56%), Positives = 17/25 (68%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK 30 ILLTG PG GKT+L K LA ++ Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIR 199 >3FB4-A nrPDB Length = 216 Score = 32.3 bits (72), Expect = 0.11, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 NI+L G PG GK T +++ K + +I+ GD+ R Sbjct: 2 NIVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFR 36 >6EPC-H nrPDB Length = 433 Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +LL G PG GKT + +A+++ +I V Sbjct: 211 GVLLFGPPGTGKTLCARAVANRTDACFIPV 240 >5VQ9-D nrPDB Length = 432 Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 15/22 (68%) Query: 6 ILLTGTPGVGKTTLGKELASKS 27 +LL G PG GKT+L K LA K Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196 >5VHO-F nrPDB Length = 267 Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L + A+++ ++ + Sbjct: 57 GVLMYGPPGTGKTLLARACAAQTKATFLKL 86 >2ZAO-A nrPDB Length = 444 Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 5 NILLTGTPGVGKTTLGKELASKS 27 ILL G PG GK+ L K +A+++ Sbjct: 169 GILLFGPPGTGKSYLAKAVATEA 191 >1IQP-A nrPDB Length = 327 Score = 32.3 bits (72), Expect = 0.12, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 16/25 (64%) Query: 3 LPNILLTGTPGVGKTTLGKELASKS 27 +P++L G PGVGKTT LA + Sbjct: 46 MPHLLFAGPPGVGKTTAALALAREL 70 >3PXG-A nrPDB Length = 468 Score = 31.9 bits (71), Expect = 0.13, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 13/77 (16%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ-----LYDGYDEEYDCPILDED 59 N +L G PGVGKT + + LA + V ++ R+++ + Y E+ ED Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIINN--EVPEILRDKRVMTLDMGTKYRGEF------ED 254 Query: 60 RVVDELDNQMREGGVIV 76 R+ +D + G +I+ Sbjct: 255 RLKKVMDEIRQAGNIIL 271 >3PXI-A nrPDB Length = 758 Score = 31.9 bits (71), Expect = 0.15, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 13/77 (16%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ-----LYDGYDEEYDCPILDED 59 N +L G PGVGKT + + LA + V ++ R+++ + Y E+ ED Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIINN--EVPEILRDKRVMTLDMGTKYRGEF------ED 254 Query: 60 RVVDELDNQMREGGVIV 76 R+ +D + G +I+ Sbjct: 255 RLKKVMDEIRQAGNIIL 271 >5FM7-A nrPDB Length = 464 Score = 31.9 bits (71), Expect = 0.15, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLK 30 +LL G PG GKT L ++ + G K Sbjct: 68 GVLLAGGPGTGKTALALAISQELGTK 93 >5VFP-F nrPDB Length = 396 Score = 31.9 bits (71), Expect = 0.16, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L + A+++ ++ + Sbjct: 179 GVLMYGPPGTGKTLLARACAAQTKATFLKL 208 >5E7P-A nrPDB Length = 745 Score = 31.5 bits (70), Expect = 0.19, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 5 NILLTGTPGVGKTTLGKELAS 25 +LL G PG GKT + + LAS Sbjct: 521 GVLLYGPPGCGKTFVVRALAS 541 >5DN8-A nrPDB Length = 446 Score = 31.5 bits (70), Expect = 0.19, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 8/114 (7%) Query: 2 LLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRV 61 +LP I + G P VGK+TL L +V + R+ Q + + ++D + Sbjct: 4 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLVDTGGL 63 Query: 62 VDELDNQM-----REGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRG 110 VD + ++ + +D C F L ++ ERL +G Sbjct: 64 VDTENKEVAPLAETQVEQAIDESDCILF---LVDAKAGLVPADEIIAERLRKKG 114 >6EF0-M nrPDB Length = 258 Score = 31.5 bits (70), Expect = 0.20, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 L+ G PG GKT L + A+++ ++ + Sbjct: 42 GALMYGPPGTGKTLLARACAAQTNATFLKL 71 >6EPD-M nrPDB Length = 442 Score = 31.5 bits (70), Expect = 0.20, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 +L+ G PG GKT L + A+++ ++ + Sbjct: 225 GVLMYGPPGTGKTLLARACAAQTKATFLKL 254 >4YPL-A nrPDB Length = 555 Score = 31.5 bits (70), Expect = 0.20, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 19/28 (67%) Query: 4 PNILLTGTPGVGKTTLGKELASKSGLKY 31 P ++L G PGVGKT+LG+ +A K+ Sbjct: 111 PILVLVGPPGVGKTSLGRSIARSMNRKF 138 >4NP6-A nrPDB Length = 217 Score = 31.5 bits (70), Expect = 0.20, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 I+L G PG GK T + + K G+ I+ GD+ R Sbjct: 6 IILLGAPGAGKGTQAQFIMEKFGIPQISTGDMLR 39 >4K46-A nrPDB Length = 214 Score = 31.5 bits (70), Expect = 0.20, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 21/34 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAR 39 I+L G PG GK T + + +K G+ I+ GD+ R Sbjct: 3 IILLGAPGAGKGTQAQFIMAKFGIPQISTGDMLR 36 >2VP0-A nrPDB Length = 250 Score = 31.2 bits (69), Expect = 0.22, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 90 HIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQL 144 ++ LRT V YER+ R +E + + +E +++ ++HQ Sbjct: 148 DLIIYLRTSPEVAYERIRQRARSE-------ESCVPLKYLQELHELHEDWLIHQR 195 >1YE8-A nrPDB Length = 178 Score = 31.2 bits (69), Expect = 0.22, Method: Composition-based stats. Identities = 13/23 (56%), Positives = 18/23 (78%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 I++TG PGVGKTTL K++ + G Sbjct: 3 IIITGEPGVGKTTLVKKIVERLG 25 >2C9Y-A nrPDB Length = 242 Score = 31.2 bits (69), Expect = 0.23, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 16/129 (12%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLARE-----EQLYDGYDEEYDCPILDEDRV 61 +L G PG GK T LA + ++ GD+ R +L D L D + Sbjct: 20 VLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEM 79 Query: 62 VDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQ 121 V EL + E + + D FP +L + +E R ++KL I+ Sbjct: 80 VVELIEKNLETPLCKNGFLLDGFPRTV--------RQAEMLDDLMEKR---KEKLDSVIE 128 Query: 122 CEIFQVLYE 130 I L Sbjct: 129 FSIPDSLLI 137 >3GMT-A nrPDB Length = 230 Score = 31.2 bits (69), Expect = 0.23, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 21/170 (12%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE-----EQLYDGYDEEYDCPILDEDR 60 ++L G PG GK T + K G+ I+ GD+ R L D L D Sbjct: 11 LILLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDS 70 Query: 61 VVDELDNQMREGGVIVDYHGCDFFP----------ERWFHIVFVLRTDTNV--LYERLE- 107 ++ L + + + + D FP E I +VL D + ER+ Sbjct: 71 LIIGLVKERLKEADCANGYLFDGFPRTIAQADAMKEAGVAIDYVLEIDVPFSEIIERMSG 130 Query: 108 TRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVD 157 R + T +++ F E E + Q +K E ++ +D Sbjct: 131 RRTHPASGRTYHVK---FNPPKVEGKDDVTGEPLVQRDDDKEETVKKRLD 177 >4AKE-A nrPDB Length = 214 Score = 31.2 bits (69), Expect = 0.25, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 5/85 (5%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE-----EQLYDGYDEEYDCPILDEDR 60 I+L G PG GK T + + K G+ I+ GD+ R +L + D L D Sbjct: 3 IILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDE 62 Query: 61 VVDELDNQMREGGVIVDYHGCDFFP 85 +V L + + D FP Sbjct: 63 LVIALVKERIAQEDCRNGFLLDGFP 87 >4YPN-A nrPDB Length = 293 Score = 30.8 bits (68), Expect = 0.33, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 19/28 (67%) Query: 4 PNILLTGTPGVGKTTLGKELASKSGLKY 31 P ++L G PGVGKT+LG+ +A K+ Sbjct: 144 PILVLVGPPGVGKTSLGRSIARSMNRKF 171 >3PVS-A nrPDB Length = 447 Score = 30.8 bits (68), Expect = 0.34, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 3 LPNILLTGTPGVGKTTLGKELA 24 L +++L G PG GKTTL + +A Sbjct: 50 LHSMILWGPPGTGKTTLAEVIA 71 >3L0S-A nrPDB Length = 223 Score = 30.8 bits (68), Expect = 0.35, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 41/113 (36%), Gaps = 18/113 (15%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE-QLYDGYDEEYDCPILDEDRVVD 63 NIL+ G G GK T G + K L +I G + RE ++ I D V D Sbjct: 2 NILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPD 61 Query: 64 E------LDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRG 110 + L+ +G D D FP L+E L+ +G Sbjct: 62 DITIPMVLETLESKGK---DGWLLDGFPRNTVQ--------AQKLFEALQEKG 103 >1TEV-A nrPDB Length = 196 Score = 30.4 bits (67), Expect = 0.39, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 20/36 (55%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 + + G PG GK T + K G +++ G+L R+E Sbjct: 6 VFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDE 41 >3UMF-A nrPDB Length = 217 Score = 30.4 bits (67), Expect = 0.40, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 20/36 (55%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 I + G PG GK T ++L K +++ GDL R E Sbjct: 32 IFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAE 67 >5A5B-M nrPDB Length = 434 Score = 30.4 bits (67), Expect = 0.41, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 17/30 (56%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINV 34 L+ G PG GKT L + A+++ ++ + Sbjct: 217 GALMYGPPGTGKTLLARACAAQTNATFLKL 246 >2CHG-A nrPDB Length = 226 Score = 30.0 bits (66), Expect = 0.52, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 3 LPNILLTGTPGVGKTTLGKELASKS 27 +P++L +G PG GKT LA Sbjct: 38 IPHLLFSGPPGTGKTATAIALARDL 62 >3J3U-A nrPDB Length = 810 Score = 30.0 bits (66), Expect = 0.60, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 18/82 (21%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL----------YDGYDEEYDCP 54 N +L G PGVGKT + + LA + V ++ R++++ Y E+ Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQQIINN--EVPEILRDKRVMTLDMGTVVAGTKYRGEF--- 257 Query: 55 ILDEDRVVDELDNQMREGGVIV 76 EDR+ +D + G +I+ Sbjct: 258 ---EDRLKKVMDEIRQAGNIIL 276 >1SXJ-C nrPDB Length = 340 Score = 29.6 bits (65), Expect = 0.66, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Query: 3 LPNILLTGTPGVGKTTLGKELASKS-GLKYINV 34 LP++L G PG GKT+ LA + G Y N+ Sbjct: 46 LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNM 78 >4I5O-A nrPDB Length = 363 Score = 29.6 bits (65), Expect = 0.68, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 20/46 (43%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEE 50 NILL G G GKT L + LA + + E Y G D E Sbjct: 53 NILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVE 98 >2AK2-A nrPDB Length = 233 Score = 29.6 bits (65), Expect = 0.71, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 16/129 (12%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLARE-----EQLYDGYDEEYDCPILDEDRV 61 +L G PG GK T +LA + ++ GD+ R +L D L D + Sbjct: 20 VLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEM 79 Query: 62 VDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQ 121 V EL + E + D FP +L + +E R ++KL I+ Sbjct: 80 VLELIEKNLETPPCKNGFLLDGFPRTV--------RQAEMLDDLMEKR---KEKLDSVIE 128 Query: 122 CEIFQVLYE 130 I L Sbjct: 129 FSIPDSLLI 137 >2CHV-A nrPDB Length = 319 Score = 29.6 bits (65), Expect = 0.75, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 3 LPNILLTGTPGVGKTTLGKELASKS 27 +P++L +G PG GKT LA Sbjct: 38 IPHLLFSGPPGTGKTATAIALARDL 62 >2GKS-A nrPDB Length = 546 Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 63/178 (35%), Gaps = 20/178 (11%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV----GDLAREEQLYDGYDEEYDCPILDEDRV 61 + LTG P GK+T+ + LA+ + V GD+ R L G + I + RV Sbjct: 375 VWLTGLPCAGKSTIAEILATMLQARGRKVTLLDGDVVR-THLSRGLGFSKEDRITNILRV 433 Query: 62 VDELDNQMREGGVIV-----DYHGC-----DFFPERWFHIVFVLRTDTNVLYERLETRGY 111 ++ GV++ Y + E F VFV V ER Y Sbjct: 434 GFVASEIVKHNGVVICALVSPYRSARNQVRNMMEEGKFIEVFV-DAPVEVCEERDVKGLY 492 Query: 112 NEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKD 169 + K YE A E+ PEE + + LK E +IKD Sbjct: 493 KKAKEGLIKGFTGVDDPYEPPVAP---EVRVDTTKLTPEESALKILEFLKK-EGFIKD 546 >1ZAK-A nrPDB Length = 222 Score = 29.6 bits (65), Expect = 0.76, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 22/36 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREE 41 ++++G P GK T + + +K L +I+ GDL R E Sbjct: 8 VMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAE 43 >1SXJ-B nrPDB Length = 323 Score = 29.6 bits (65), Expect = 0.78, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 17/69 (24%) Query: 3 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGY-DEEYDCPILDEDRV 61 +P+++++G PG+GKTT LA + L Y D + D DR Sbjct: 42 MPHMIISGMPGIGKTTSVHCLAHEL---------------LGRSYADGVLELNASD-DRG 85 Query: 62 VDELDNQMR 70 +D + NQ++ Sbjct: 86 IDVVRNQIK 94 >1OFI-A nrPDB Length = 310 Score = 29.6 bits (65), Expect = 0.80, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILD-EDRVVD 63 NIL+ G GVGKT + + LA + +I V E Y G +E D I D D Sbjct: 52 NILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVG--KEVDSIIRDLTDSAGG 109 Query: 64 ELDNQMREGGVIVD 77 +D + G V +D Sbjct: 110 AIDAVEQNGIVFID 123 >1E94-E nrPDB Length = 449 Score = 29.2 bits (64), Expect = 0.82, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILD-EDRVVD 63 NIL+ G GVGKT + + LA + +I V E Y G +E D I D D V Sbjct: 58 NILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVG--KEVDSIIRDLTDAAVK 115 Query: 64 ELDNQMREGGVIVDYHGCDFFPERWFHIVF 93 + Q E Y + ER ++ Sbjct: 116 MVRVQAIEKNR---YRAEELAEERILDVLI 142 >2NZJ-A nrPDB Length = 175 Score = 29.2 bits (64), Expect = 1.0, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Query: 1 MLLPNILLTGTPGVGKTTLGKELASKSGLK-YINVGDLAREEQLYDGYDEEYDCPILDED 59 M L ++L G PGVGKT+L A K + +G+ E L D E ++ + Sbjct: 2 MALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTL--TVDGEDTTLVVVDT 59 Query: 60 RVVDELDNQMREGGVIVDY 78 ++LD + + Sbjct: 60 WEAEKLDKSWSQESCLQGG 78 >1SW7-A nrPDB Length = 248 Score = 29.2 bits (64), Expect = 1.0, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Query: 102 LYERLETRGYNEKKLTDNIQCEIFQVLYEEATA------SYKEEIVHQLPSN-KPEELEN 154 + E+L+ R E +T+ + E + + + +Y+ ++ P++ + Sbjct: 127 IGEKLDER---EAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNSSTPQQAQE 183 Query: 155 NVDQILKWIEQWIKD 169 +++ W++ + D Sbjct: 184 VHEKLRGWLKSHVSD 198 >3H0K-A nrPDB Length = 178 Score = 28.8 bits (63), Expect = 1.1, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 10/59 (16%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDE 64 IL+TG PG GK+ K L + G K I + D+ R+ Y +R++D Sbjct: 3 ILITGMPGSGKSEFAKLL-KERGAKVIVMSDVVRKR---------YSIEAKPGERLMDF 51 >2I3B-A nrPDB Length = 189 Score = 28.8 bits (63), Expect = 1.1, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Query: 6 ILLTGTPGVGKTTL---GKELASKSGL 29 + LTG PGVGKTTL E+ SG+ Sbjct: 4 VFLTGPPGVGKTTLIHKASEVLKSSGV 30 >2AKY-A nrPDB Length = 220 Score = 28.8 bits (63), Expect = 1.2, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 13/72 (18%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 ++L G PG GK T L + ++ GD+ R + I ++ E Sbjct: 7 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQ-------------IAKGTQLGLEA 53 Query: 66 DNQMREGGVIVD 77 M +GG++ D Sbjct: 54 KKIMDQGGLVSD 65 >1NKS-A nrPDB Length = 194 Score = 28.8 bits (63), Expect = 1.3, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 7 LLTGTPGVGKTTL---GKELASKSGLKY--INVGDLAREEQLYDGYDEEYD 52 ++TG PGVGK+T+ KE+ G+ IN GD L GY ++ D Sbjct: 5 IVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRD 55 >1IM2-A nrPDB Length = 444 Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVG--DLAREEQLYDGYDE 49 NIL+ G GVGKT + + LA + +I V + D Sbjct: 52 NILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDS 98 >2Q1T-A nrPDB Length = 377 Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 67/157 (42%), Gaps = 14/157 (8%) Query: 5 NILLTGTPG-VGKTTLGKELASKSGLKYINVGD--LAREE-QLYDGYDEEYDCPILDEDR 60 N+++ G G VG + + L + G+ ++V D L+ E+ + D + + +D Sbjct: 34 NVMVVGGAGFVGSNLVKRLL--ELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDA 91 Query: 61 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNV----LYERLETRGYNEKKL 116 ++ L ++ + YHG + H + + LYERL+ +K + Sbjct: 92 LLASLQDEYDYVFHLATYHGN----QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVV 147 Query: 117 TDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELE 153 C I + +++A A+ + +IV ++ P + Sbjct: 148 YSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMS 184 >1SXJ-D nrPDB Length = 353 Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 3 LPNILLTGTPGVGKTTLGKELASKS 27 LP++L G PG GKT+ L + Sbjct: 58 LPHMLFYGPPGTGKTSTILALTKEL 82 >4POC-A nrPDB Length = 254 Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Query: 102 LYERLETRGYNEKKLTDNIQCEIFQVLYEEATA------SYKEEIVHQL-PSNKPEELEN 154 + E+L+ R E +T+ + E +V+ + +Y+ + P++ + Sbjct: 133 IGEKLDER---EAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQE 189 Query: 155 NVDQILKWIEQWIKD 169 +++ W++ + D Sbjct: 190 VHEKLRGWLKSNVSD 204 >4TKO-B nrPDB Length = 358 Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 7/88 (7%) Query: 83 FFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTD-NIQCEIFQVLYEEATASYKEEIV 141 P R F V T+ VL L R Y EK + + N + + + E A +K Sbjct: 138 LIPRRKFEEV---DTNLKVL---LHEREYLEKSIQEINTEIKRAKKGIENARNEFKTIEE 191 Query: 142 HQLPSNKPEELENNVDQILKWIEQWIKD 169 + + EE ++ + +K EQ IKD Sbjct: 192 LKKELSSLEEEIKSLKERIKTAEQKIKD 219 >3A4L-A nrPDB Length = 260 Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINV----GDLAREE 41 I+LTG PGVGK+T K LA I+V DL RE Sbjct: 7 IILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRES 46 >5CWS-E nrPDB Length = 247 Score = 28.5 bits (62), Expect = 1.8, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 19/116 (16%) Query: 57 DEDRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKK- 115 DED + +L + D E W ++ VLR L +++ G E Sbjct: 150 DEDELKQKLQQIDKTLN---DPAQGSRLEELWSRLI-VLRGYAEDLKDQINQAGITESDG 205 Query: 116 LTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWIKDHN 171 L + I+ + ++L + + + L+ V++ K E+W K HN Sbjct: 206 LGEEIEAKAKKILEDY--------------DKQLQHLKKQVEEAKKDFEEWEKQHN 247 >2XSZ-D nrPDB Length = 378 Score = 28.5 bits (62), Expect = 1.8, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 +L+ G PG GKT + +A G Sbjct: 88 VLIAGQPGTGKTAIAMGMAQALG 110 >2JAQ-A nrPDB Length = 205 Score = 28.5 bits (62), Expect = 1.8, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 57/167 (34%), Gaps = 43/167 (25%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDED------ 59 I + GT G GK+T+ E++ K G + + E ++ Y ++ + Sbjct: 3 IAIFGTVGAGKSTISAEISKKLGYEIF--KEPVEENPYFEQYYKDLKKTVFKMQIYMLTA 60 Query: 60 -----RVVDELDNQMREGGVI-------VDYHGCDF---------------------FPE 86 + L+N + + ++ V+Y + PE Sbjct: 61 RSKQLKQAKNLENIIFDRTLLEDPIFMKVNYDLNNVDQTDYNTYIDFYNNVVLENLKIPE 120 Query: 87 R--WFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIFQVLYEE 131 F IV LR T R++ RG +E+ L E YEE Sbjct: 121 NKLSFDIVIYLRVSTKTAISRIKKRGRSEELLIGEEYWETLNKNYEE 167 >4WW4-B nrPDB Length = 513 Score = 28.1 bits (61), Expect = 1.9, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 +L+ G P GKT + +A G Sbjct: 98 VLIAGPPSTGKTAIAMGMAQSLG 120 >6QI9-D nrPDB Length = 463 Score = 28.1 bits (61), Expect = 2.0, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 +L+ G PG GKT + +A G Sbjct: 73 VLIAGQPGTGKTAIAMGMAQALG 95 >6EPG-B nrPDB Length = 401 Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYD 52 I +TG PG G T+ K + + K + G LAR + + ++ + Sbjct: 105 IFVTGIPGSGATSTVKNMMMQDTTKLLFEGQLARPQSAFRKIEQCLE 151 >3CRQ-A nrPDB Length = 323 Score = 28.1 bits (61), Expect = 2.2, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Query: 2 LLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYD 48 L P I L G GKT L LA + I+V D A +Y G D Sbjct: 4 LPPAIFLMGPTAAGKTDLAMALADALPCELISV-DSAL---IYRGMD 46 >5BQ5-A nrPDB Length = 189 Score = 28.1 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 5/41 (12%) Query: 5 NILLTGTPGVGKTTLGKELASKS---GLK--YINVGDLARE 40 NIL G PG+GKT L + ++ G K +I DL + Sbjct: 41 NILFLGPPGIGKTHLAISIGMEAIARGYKTYFITAHDLVNQ 81 >5D4W-A nrPDB Length = 926 Score = 28.1 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 4 PNILLTGTPGVGKTTLGKELAS 25 P+ L G G GKT L K LA Sbjct: 628 PSFLFCGPSGTGKTLLTKALAE 649 Score = 26.1 bits (56), Expect = 8.2, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 16/22 (72%) Query: 5 NILLTGTPGVGKTTLGKELASK 26 N +L G PGVGKTT+ + LA + Sbjct: 218 NPVLIGEPGVGKTTIVEGLAQR 239 >5FHF-A nrPDB Length = 433 Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 16/28 (57%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYI 32 N+ +TG G GKTT K L KSG I Sbjct: 23 NVFVTGKAGSGKTTFLKYLIEKSGKNCI 50 >3W34-A nrPDB Length = 211 Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 9/52 (17%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLK---------YINVGDLAREEQLYDGYD 48 I + G GKTTL + LA G + Y ++G L EE+L YD Sbjct: 9 IGIAGGTASGKTTLAQALARTLGERVALLPMDHYYKDLGHLPLEERLRVNYD 60 >3GP8-A nrPDB Length = 574 Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Query: 6 ILLTGTPGVGKTTLGKE---LASKSGLK 30 ++LTG PG GK+T K LA GL+ Sbjct: 207 VVLTGGPGTGKSTTTKAVADLAESLGLE 234 >6GEJ-T nrPDB Length = 463 Score = 27.7 bits (60), Expect = 2.6, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 ILL G P GKT L ++ + G Sbjct: 75 ILLAGGPSTGKTALALAISQELG 97 >1UM8-A nrPDB Length = 376 Score = 27.7 bits (60), Expect = 2.6, Method: Composition-based stats. Identities = 11/20 (55%), Positives = 13/20 (65%) Query: 5 NILLTGTPGVGKTTLGKELA 24 NILL G G GKT + + LA Sbjct: 74 NILLIGPTGSGKTLMAQTLA 93 >1RPZ-A nrPDB Length = 301 Score = 27.3 bits (59), Expect = 3.4, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 6 ILLTGTPGVGKTTLGKE-LASKSGLKYINVGDLAREEQLYDGYDE 49 IL G PG GK+T +E +A G IN D + ++ DE Sbjct: 5 ILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDE 49 >1NJG-A nrPDB Length = 250 Score = 27.3 bits (59), Expect = 3.9, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 11/77 (14%) Query: 7 LLTGTPGVGKTTLGKELAS----KSGLKYINVG--DLAREEQLYD-----GYDEEYDCPI 55 L +GT GVGKT++ + LA ++G+ G D RE + D + Sbjct: 49 LFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKV 108 Query: 56 LDEDRVVDELDNQMREG 72 D ++D + G Sbjct: 109 EDTRDLLDNVQYAPARG 125 >6EMW-E nrPDB Length = 181 Score = 26.9 bits (58), Expect = 4.1, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 18/82 (21%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL----------YDGYDEEYDCP 54 N +L G PGVGKT + + LA V + +++++ Y E+ Sbjct: 42 NPVLIGEPGVGKTAIAEGLAQAIVNN--EVPETLKDKRVMSLDMGTVVAGTKYRGEF--- 96 Query: 55 ILDEDRVVDELDNQMREGGVIV 76 E+R+ ++ + G VI+ Sbjct: 97 ---EERLKKVMEEIQQAGNVIL 115 >4ZPX-A nrPDB Length = 413 Score = 26.9 bits (58), Expect = 4.6, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 14/20 (70%) Query: 6 ILLTGTPGVGKTTLGKELAS 25 +LL G PG GK+ LG+ +A Sbjct: 63 VLLIGEPGTGKSMLGQAMAE 82 >3U5Z-B nrPDB Length = 324 Score = 26.9 bits (58), Expect = 4.8, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Query: 3 LPNILLTGT-PGVGKTTLGKEL 23 +P+I+L PG GKTT+ K L Sbjct: 47 IPHIILHSPSPGTGKTTVAKAL 68 >6D00-1 nrPDB Length = 883 Score = 26.5 bits (57), Expect = 5.5, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 15/22 (68%) Query: 5 NILLTGTPGVGKTTLGKELASK 26 N L G PGVGKT + + LA++ Sbjct: 201 NPCLVGEPGVGKTAIAEGLANR 222 >2GA8-A nrPDB Length = 359 Score = 26.5 bits (57), Expect = 5.5, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 17/26 (65%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKY 31 ++L G+PG GK+T+ +EL KY Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKY 52 >6GEJ-U nrPDB Length = 471 Score = 26.5 bits (57), Expect = 5.6, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 6 ILLTGTPGVGKTTLGKELASKSG 28 +L+ G P GKT L ++ G Sbjct: 71 VLVAGPPSTGKTALAMGVSQSLG 93 >3PFI-A nrPDB Length = 338 Score = 26.5 bits (57), Expect = 5.8, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 3 LPNILLTGTPGVGKTTLGKELASK 26 L +IL +G G+GKTTL ++ + Sbjct: 55 LDHILFSGPAGLGKTTLANIISYE 78 >5V8F-A nrPDB Length = 913 Score = 26.5 bits (57), Expect = 5.9, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%) Query: 6 ILLTGTPGVGKTTLGKELASKS 27 I + GTPGVGKT +E+ + Sbjct: 475 IYVAGTPGVGKTLTVREVVKEL 496 >6EM8-A nrPDB Length = 818 Score = 26.5 bits (57), Expect = 6.1, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 18/82 (21%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL----------YDGYDEEYDCP 54 N +L G PGVGKT + + LA V + +++++ Y E+ Sbjct: 203 NPVLIGEPGVGKTAIAEGLAQAIVNN--EVPETLKDKRVMSLDMGTVVAGTKYRGEF--- 257 Query: 55 ILDEDRVVDELDNQMREGGVIV 76 E+R+ ++ + G VI+ Sbjct: 258 ---EERLKKVMEEIQQAGNVIL 276 >3GLF-B nrPDB Length = 395 Score = 26.5 bits (57), Expect = 6.2, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 11/77 (14%) Query: 7 LLTGTPGVGKTTLGKELAS----KSGLKYINVG--DLAREEQLYD-----GYDEEYDCPI 55 L +GT GVGKT++ + LA ++G+ G D RE + D + Sbjct: 64 LFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKV 123 Query: 56 LDEDRVVDELDNQMREG 72 D ++D + G Sbjct: 124 EDTRDLLDNVQYAPARG 140 >3N98-A nrPDB Length = 562 Score = 26.5 bits (57), Expect = 6.4, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%) Query: 59 DRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYER 105 +R++ E + + E G+IV + + F WF V L +LY+R Sbjct: 333 ERLLREHEEKFGEKGIIVAPYDTELFGHWWFEGVKWLGRVLELLYQR 379 >5ZLU-EE nrPDB Length = 497 Score = 26.5 bits (57), Expect = 6.4, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 16/22 (72%) Query: 6 ILLTGTPGVGKTTLGKELASKS 27 + +TG+ G GKT+L K ++ ++ Sbjct: 325 VAITGSNGTGKTSLLKMISERA 346 >3EC2-A nrPDB Length = 180 Score = 26.5 bits (57), Expect = 6.4, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 17/84 (20%) Query: 5 NILLTGTPGVGKTTLG----KELASKSGLK--YINVGDLAREEQLYDGYDEEYDCPILDE 58 + G+PGVGKT L K + K G++ + + DL + ++DE Sbjct: 40 GLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRLK-----------HLMDE 88 Query: 59 DRVVDELDNQMREGGVIVDYHGCD 82 + L + +++D G + Sbjct: 89 GKDTKFLKTVLNSPVLVLDDLGSE 112 >5XTD-w nrPDB Length = 320 Score = 26.5 bits (57), Expect = 6.5, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKY 31 I + G GK L KE+A K G K+ Sbjct: 25 ITVDGNICTGKGKLAKEIAEKLGFKH 50 >3K1J-A nrPDB Length = 604 Score = 26.5 bits (57), Expect = 6.6, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 14/20 (70%) Query: 6 ILLTGTPGVGKTTLGKELAS 25 +LL G PG GK+ LG+ +A Sbjct: 63 VLLIGEPGTGKSMLGQAMAE 82 >2YVU-A nrPDB Length = 186 Score = 26.5 bits (57), Expect = 6.6, Method: Composition-based stats. Identities = 11/20 (55%), Positives = 13/20 (65%) Query: 6 ILLTGTPGVGKTTLGKELAS 25 + LTG PG GKTT+ LA Sbjct: 16 VWLTGLPGSGKTTIATRLAD 35 >1KNX-A nrPDB Length = 312 Score = 26.1 bits (56), Expect = 7.2, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Query: 5 NILLTGTPGVGKTTLGKELASKSGLKYINVGDLARE 40 +LLTG G+GK+ +L +K ++ VGD A E Sbjct: 149 GVLLTGRSGIGKSECALDLINK---NHLFVGDDAIE 181 >6E11-1 nrPDB Length = 906 Score = 26.1 bits (56), Expect = 7.6, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 5/39 (12%) Query: 7 LLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYD 45 +L G PG GKTT+ + L + I GD+ +E Q Y Sbjct: 232 VLVGNPGTGKTTIVEGLVYR-----IEKGDVPKELQGYT 265 >5B63-A nrPDB Length = 587 Score = 26.1 bits (56), Expect = 7.8, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 11/86 (12%) Query: 36 DLAREEQLYDGYDEEYDCPILDEDRVVDELDNQMREGGVIVDYH-GCDFFPERWFHIVFV 94 +LA E Y + YD ED + + R +V G ++F E W +V + Sbjct: 194 ELADLEGFYRDAKKHYD-----EDE--EFAE---RARNYVVKLQSGDEYFREMWRKLVDI 243 Query: 95 LRTDTNVLYERLETRGYNEKKLTDNI 120 T + Y+RL + + +++ Sbjct: 244 TMTQNQITYDRLNVTLTRDDVMGESL 269 >2W0M-A nrPDB Length = 235 Score = 26.1 bits (56), Expect = 8.0, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 29/121 (23%) Query: 6 ILLTGTPGVGKTT-----LGKELASKSGLKYINVGD-----LAREEQLYDGYDEEYDCPI 55 I LTG PG GKT + K L Y+ + + + +Q ++E + + Sbjct: 26 IALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTEESRDSIIRQAKQFNWDFEEYIEKKL 85 Query: 56 LDEDRVVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKK 115 + D ++ E ++Q + + PE + V E + GY + + Sbjct: 86 IIIDALMKEKEDQ---------WSLVNLTPEELVNKVI----------EAKQKLGYGKAR 126 Query: 116 L 116 L Sbjct: 127 L 127 >2GRJ-A nrPDB Length = 192 Score = 26.1 bits (56), Expect = 8.1, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 72/176 (40%), Gaps = 21/176 (11%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDEL 65 I +TG G GK+T+ + L +K G +NV + E + + E+ + + D Sbjct: 15 IGVTGKIGTGKSTVCEILKNKYGAHVVNVDRIGHE--VLEEVKEKL-VELFGGSVLEDGK 71 Query: 66 DNQMREGGVIVDYHGCDFFPERWFHIV-------FVLRTDTNVLYERLETRGYNEKKLTD 118 N+ + G++ + E H + + +T ++ E + +L D Sbjct: 72 VNRKKLAGIVFESRENLKKLELLVHPLMKKRVQEIINKTSGLIVIEAALLKRMGLDQLCD 131 Query: 119 NI-------QCEIFQVLYEEATASYKEEIV----HQLPSNKPEELENNVDQILKWI 163 ++ + + + + ++E+IV ++ E+LE V++++K + Sbjct: 132 HVITVVASRETILKRNREADRRLKFQEDIVPQGIVVANNSTLEDLEKKVEEVMKLV 187 >5LNK-k nrPDB Length = 320 Score = 26.1 bits (56), Expect = 8.8, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 6 ILLTGTPGVGKTTLGKELASKSGLKY 31 I + G GK+ L KE+A K GLK+ Sbjct: 25 ITVDGNICSGKSKLAKEVAEKLGLKH 50 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.137 0.349 Lambda K H 0.267 0.0411 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,714,652 Number of Sequences: 36641 Number of extensions: 265537 Number of successful extensions: 1765 Number of sequences better than 10.0: 221 Number of HSP's better than 10.0 without gapping: 366 Number of HSP's successfully gapped in prelim test: 49 Number of HSP's that attempted gapping in prelim test: 1353 Number of HSP's gapped (non-prelim): 446 length of query: 172 length of database: 10,336,785 effective HSP length: 90 effective length of query: 82 effective length of database: 7,039,095 effective search space: 577205790 effective search space used: 577205790 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 55 (25.8 bits)