BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9Y3B2
         (195 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2NN6-I nrPDB                                                          404   e-113
6FSZ-II nrPDB                                                          91   4e-19
5JEA-H nrPDB                                                           36   0.012
4OO1-H nrPDB                                                           35   0.014
5JVF-A nrPDB                                                           30   0.65 
4QS9-A nrPDB                                                           30   0.93 
3M7N-A nrPDB                                                           28   1.9  
6FFY-A nrPDB                                                           28   2.9  
2UYT-A nrPDB                                                           28   3.3  
5WWP-B nrPDB                                                           26   8.5  

>2NN6-I nrPDB
          Length = 209

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE 60
           MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE
Sbjct: 15  MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE 74

Query: 61  SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK 120
           SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK
Sbjct: 75  SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK 134

Query: 121 SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK 180
           SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK
Sbjct: 135 SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK 194

Query: 181 EFRKVARVQPEFLQT 195
           EFRKVARVQPEFLQT
Sbjct: 195 EFRKVARVQPEFLQT 209


>6FSZ-II nrPDB
          Length = 301

 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 37/160 (23%)

Query: 64  LPDVGAIVTCKVSSINSRFAKVHILYVGSMP----------------------------- 94
           LP  G IV  +V+ ++ + A V IL V   P                             
Sbjct: 141 LPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGSNGSGIVAAGGGSGAATFSVS 200

Query: 95  -----LKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAEN 149
                L  +FRG IR +DVR+T++D+V++ + F+PGDIV A+V+SLGD  +NY LTTA N
Sbjct: 201 QASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDG-TNYYLTTARN 259

Query: 150 ELGVVVAHSESGIQ--MVPISWCEMQCPKTHTKEFRKVAR 187
           +LGVV A + +G    M    W  M  P T   E RK A+
Sbjct: 260 DLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAK 299


>5JEA-H nrPDB
          Length = 316

 Score = 35.8 bits (81), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 20/133 (15%)

Query: 10  PGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVGA 69
           PGE + +      G GTY      +SS+AG +  S  N  L V+ +    + +  P+ G 
Sbjct: 14  PGELVTDDPIWMRGHGTYFLDNMTYSSVAGTV--SRVNRLLSVIPL----KGRYAPETGD 67

Query: 70  IVTCKVSSINSRFAKVHI-------LYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSF 122
            V  +++ + ++  KV I       L +GS+ L     G +R    R +E D++++    
Sbjct: 68  HVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPG---GILR----RKSESDELQMRSFL 120

Query: 123 RPGDIVLAKVISL 135
           + GD++ A+V SL
Sbjct: 121 KEGDLLNAEVQSL 133


>4OO1-H nrPDB
          Length = 363

 Score = 35.4 bits (80), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 20/133 (15%)

Query: 10  PGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVGA 69
           PGE + +      G GTY      +SS+AG +  S  N  L V+ +    + +  P+ G 
Sbjct: 61  PGELVTDDPIWMRGHGTYFLDNMTYSSVAGTV--SRVNRLLSVIPL----KGRYAPETGD 114

Query: 70  IVTCKVSSINSRFAKVHI-------LYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSF 122
            V  +++ + ++  KV I       L +GS+ L     G +R    R +E D++++    
Sbjct: 115 HVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPG---GILR----RKSESDELQMRSFL 167

Query: 123 RPGDIVLAKVISL 135
           + GD++ A+V SL
Sbjct: 168 KEGDLLNAEVQSL 180


>5JVF-A nrPDB
          Length = 285

 Score = 30.0 bits (66), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 65  PDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKE 106
           P  G  +  K++ +  RF  V + YVG +P   S R  ++K+
Sbjct: 191 PQEGRNLFAKLTKVTDRFLDVALQYVGVIPYDESVRKAVQKQ 232


>4QS9-A nrPDB
          Length = 474

 Score = 29.6 bits (65), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 101 GTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVIS---LGDAQSNYLLTTAEN 149
           G  R   +  TE D    ++S  PG+ +L K+IS   LG+     LL  AE+
Sbjct: 264 GNFRSSHLPLTEFDHTLDFESLNPGEQILEKIISGMYLGEILRRVLLKMAED 315


>3M7N-A nrPDB
          Length = 179

 Score = 28.5 bits (62), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)

Query: 5   VRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLL 64
           +R+ +PG+R+ + EE   G G Y   G +F+++AG L+       +  +S + E      
Sbjct: 1   MRFVMPGDRIGSAEEYVKGEGVYEEGGELFAAVAGKLIIKDRVAKVESISPIPEIVK--- 57

Query: 65  PDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRP 124
              G +V  +V  + +  A + +          S RG          E    EI ++   
Sbjct: 58  ---GDVVLGRVVDLRNSIALIEVSSKKGENRGPSNRGIGILHVSNVDEGYVKEISEAVGY 114

Query: 125 GDIVLAKVISLGDAQSNYLLTTAENELGVVVAH-SESGIQMVPISWCEMQCPKTHTKEFR 183
            DI+ A+VI  GD   N  L+T E E+GV+ A  S    +MV      ++CP+    E R
Sbjct: 115 LDILKARVI--GD---NLRLSTKEEEMGVLRALCSNCKTEMVREGDI-LKCPECGRVEKR 168

Query: 184 KVA 186
           K++
Sbjct: 169 KIS 171


>6FFY-A nrPDB
          Length = 972

 Score = 27.7 bits (60), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 100 RGTIRKED----VRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVV 155
           RG++  +D    ++AT  ++ + Y S+R  D VL K+      +   +++T E ++ V V
Sbjct: 230 RGSLTVQDEYIFLKATSTNRTKYYVSYRRSDFVLMKLPKYALPKDLQIISTDEQQVFVAV 289


>2UYT-A nrPDB
          Length = 489

 Score = 27.7 bits (60), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 9/57 (15%)

Query: 137 DAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTKEFRKVARVQPEFL 193
           D+++N L+  A+ +LG    +  SGIQ +P +            + R +   QPE +
Sbjct: 104 DSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFN---------TLYQLRALTEQQPELI 151


>5WWP-B nrPDB
          Length = 600

 Score = 26.2 bits (56), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 23/93 (24%)

Query: 28  TRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLL--PDVGAIVTCKVSSINSRFAKV 85
           T   Y+FS++           ALP      ET + +L   +V       +S IN+R    
Sbjct: 353 TNSQYLFSTI----------NALP------ETSADILVVDEVSMCTNYDLSIINARIKAK 396

Query: 86  HILYVGS---MPLKNSF--RGTIRKEDVRATEK 113
           HI+YVG    +P   +   RGT+  E+  +  +
Sbjct: 397 HIVYVGDPAQLPAPRTLLTRGTLEPENFNSVTR 429


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2NN6-I nrPDB                                                          382   e-107
6FSZ-II nrPDB                                                         196   5e-51

Sequences not found previously or not previously below threshold:

3M7N-A nrPDB                                                           51   4e-07
5JEA-H nrPDB                                                           42   2e-04
4OO1-H nrPDB                                                           42   2e-04
6D6R-H nrPDB                                                           36   0.013
5JVF-A nrPDB                                                           32   0.12 
5MS0-M nrPDB                                                           31   0.39 
5LM9-A nrPDB                                                           31   0.39 
5LM7-A nrPDB                                                           31   0.39 
5DM6-M nrPDB                                                           27   5.8  
6H58-y nrPDB                                                           27   5.9  
4V49-BN nrPDB                                                          27   6.1  
1NWY-N nrPDB                                                           27   6.6  
6ELZ-w nrPDB                                                           26   9.4  

>2NN6-I nrPDB
          Length = 209

 Score =  382 bits (981), Expect = e-107,   Method: Composition-based stats.
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE 60
           MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE
Sbjct: 15  MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETE 74

Query: 61  SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK 120
           SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK
Sbjct: 75  SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYK 134

Query: 121 SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK 180
           SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK
Sbjct: 135 SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTK 194

Query: 181 EFRKVARVQPEFLQT 195
           EFRKVARVQPEFLQT
Sbjct: 195 EFRKVARVQPEFLQT 209


>6FSZ-II nrPDB
          Length = 301

 Score =  196 bits (498), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 37/160 (23%)

Query: 64  LPDVGAIVTCKVSSINSRFAKVHILYVGSMP----------------------------- 94
           LP  G IV  +V+ ++ + A V IL V   P                             
Sbjct: 141 LPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGSNGSGIVAAGGGSGAATFSVS 200

Query: 95  -----LKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAEN 149
                L  +FRG IR +DVR+T++D+V++ + F+PGDIV A+V+SLGD  +NY LTTA N
Sbjct: 201 QASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDG-TNYYLTTARN 259

Query: 150 ELGVVVAHSESGIQ--MVPISWCEMQCPKTHTKEFRKVAR 187
           +LGVV A + +G    M    W  M  P T   E RK A+
Sbjct: 260 DLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAK 299


>3M7N-A nrPDB
          Length = 179

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 13/183 (7%)

Query: 5   VRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLL 64
           +R+ +PG+R+ + EE   G G Y   G +F+++AG L+       +  +S + E      
Sbjct: 1   MRFVMPGDRIGSAEEYVKGEGVYEEGGELFAAVAGKLIIKDRVAKVESISPIPEIVK--- 57

Query: 65  PDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKV-EIYKSFR 123
              G +V  +V  + +  A + +          S RG I    V   ++  V EI ++  
Sbjct: 58  ---GDVVLGRVVDLRNSIALIEVSSKKGENRGPSNRG-IGILHVSNVDEGYVKEISEAVG 113

Query: 124 PGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTKEFR 183
             DI+ A+VI  GD   N  L+T E E+GV+ A   +    +      ++CP+    E R
Sbjct: 114 YLDILKARVI--GD---NLRLSTKEEEMGVLRALCSNCKTEMVREGDILKCPECGRVEKR 168

Query: 184 KVA 186
           K++
Sbjct: 169 KIS 171


>5JEA-H nrPDB
          Length = 316

 Score = 41.6 bits (96), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 20/133 (15%)

Query: 10  PGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVGA 69
           PGE + +      G GTY      +SS+AG +  S  N  L V+ +    + +  P+ G 
Sbjct: 14  PGELVTDDPIWMRGHGTYFLDNMTYSSVAGTV--SRVNRLLSVIPL----KGRYAPETGD 67

Query: 70  IVTCKVSSINSRFAKVHI-------LYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSF 122
            V  +++ + ++  KV I       L +GS+ L     G +R    R +E D++++    
Sbjct: 68  HVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPG---GILR----RKSESDELQMRSFL 120

Query: 123 RPGDIVLAKVISL 135
           + GD++ A+V SL
Sbjct: 121 KEGDLLNAEVQSL 133


>4OO1-H nrPDB
          Length = 363

 Score = 41.6 bits (96), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 20/133 (15%)

Query: 10  PGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVGA 69
           PGE + +      G GTY      +SS+AG +  S  N  L V+ +    + +  P+ G 
Sbjct: 61  PGELVTDDPIWMRGHGTYFLDNMTYSSVAGTV--SRVNRLLSVIPL----KGRYAPETGD 114

Query: 70  IVTCKVSSINSRFAKVHI-------LYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSF 122
            V  +++ + ++  KV I       L +GS+ L     G +R    R +E D++++    
Sbjct: 115 HVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPG---GILR----RKSESDELQMRSFL 167

Query: 123 RPGDIVLAKVISL 135
           + GD++ A+V SL
Sbjct: 168 KEGDLLNAEVQSL 180


>6D6R-H nrPDB
          Length = 296

 Score = 35.8 bits (81), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 9   IPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKSSENGALPVVSVVRETESQLLPDVG 68
           +PG+ +        G GTY     + +S+AG + + ++      +  V+  +++ + +VG
Sbjct: 31  VPGDTITTDTGFMRGHGTYMGEEKLIASVAGSVERVNK------LICVKALKTRYIGEVG 84

Query: 69  AIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFRPGDIV 128
            IV  +++ +  +  KV         L  S       E  R + +D++ +    + GD++
Sbjct: 85  DIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGELRRRSAEDELAMRGFLQEGDLI 144

Query: 129 LAKV 132
            A+V
Sbjct: 145 SAEV 148


>5JVF-A nrPDB
          Length = 285

 Score = 32.3 bits (72), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 65  PDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKE 106
           P  G  +  K++ +  RF  V + YVG +P   S R  ++K+
Sbjct: 191 PQEGRNLFAKLTKVTDRFLDVALQYVGVIPYDESVRKAVQKQ 232


>5MS0-M nrPDB
          Length = 497

 Score = 30.8 bits (68), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 21/89 (23%)

Query: 52  VVSVVRETESQLLPD-----VGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKE 106
           +V  VRE E  ++ D      G I+T  V  +N     +      S+ L N+    I +E
Sbjct: 116 IVQKVREAERAMVVDQFREHEGEIITGVVKKVN--RDNI------SLDLGNNAEAVILRE 167

Query: 107 DVRATEKDKVEIYKSFRPGDIVLAKVISL 135
           D+   E         FRPGD V   + S+
Sbjct: 168 DMLPREN--------FRPGDRVRGVLYSV 188


>5LM9-A nrPDB
          Length = 329

 Score = 30.8 bits (68), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 21/89 (23%)

Query: 52  VVSVVRETESQLLPD-----VGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKE 106
           +V  VRE E  ++ D      G I+T  V  +N     +      S+ L N+    I +E
Sbjct: 17  IVQKVREAERAMVVDQFREHEGEIITGVVKKVN--RDNI------SLDLGNNAEAVILRE 68

Query: 107 DVRATEKDKVEIYKSFRPGDIVLAKVISL 135
           D+   E         FRPGD V   + S+
Sbjct: 69  DMLPREN--------FRPGDRVRGVLYSV 89


>5LM7-A nrPDB
          Length = 428

 Score = 30.8 bits (68), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 21/89 (23%)

Query: 52  VVSVVRETESQLLPD-----VGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKE 106
           +V  VRE E  ++ D      G I+T  V  +N     +      S+ L N+    I +E
Sbjct: 116 IVQKVREAERAMVVDQFREHEGEIITGVVKKVN--RDNI------SLDLGNNAEAVILRE 167

Query: 107 DVRATEKDKVEIYKSFRPGDIVLAKVISL 135
           D+   E         FRPGD V   + S+
Sbjct: 168 DMLPREN--------FRPGDRVRGVLYSV 188


>5DM6-M nrPDB
          Length = 109

 Score = 27.0 bits (58), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 104 RKEDVRATEKDKVEIYKSFRPGDIVL 129
           R E +R  E+D       FRPGD V 
Sbjct: 8   RGELLRGIEQDHTRQLPDFRPGDTVR 33


>6H58-y nrPDB
          Length = 557

 Score = 27.0 bits (58), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 21/74 (28%)

Query: 64  LPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSFR 123
           L   GAIVT KV++++++ A V         L +   G +R  +     +D+VE      
Sbjct: 447 LNKKGAIVTGKVTAVDAKGATVE--------LADGVEGYLRASE---ASRDRVE------ 489

Query: 124 PGDIVLAKVISLGD 137
             D  L  V+S+GD
Sbjct: 490 --DATL--VLSVGD 499


>4V49-BN nrPDB
          Length = 125

 Score = 27.0 bits (58), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 104 RKEDVRATEKDKVEIYKSFRPGDIVL 129
           R E +R  E+D       FRPGD V 
Sbjct: 8   RGELLRGIEQDHTRQLPDFRPGDTVR 33


>1NWY-N nrPDB
          Length = 166

 Score = 26.6 bits (57), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 104 RKEDVRATEKDKVEIYKSFRPGDIVL 129
           R E +R  E+D       FRPGD V 
Sbjct: 9   RGELLRGIEQDHTRQLPDFRPGDTVR 34


>6ELZ-w nrPDB
          Length = 841

 Score = 26.2 bits (56), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 71  VTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKS 121
           V  K+  +NS    V I+ +  MP   +F+  I  ED R+  +  ++ +K+
Sbjct: 63  VASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA 113


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.313    0.134    0.378 

Lambda     K      H
   0.267   0.0411    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,318,883
Number of Sequences: 36641
Number of extensions: 265482
Number of successful extensions: 691
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 30
length of query: 195
length of database: 10,336,785
effective HSP length: 92
effective length of query: 103
effective length of database: 6,965,813
effective search space: 717478739
effective search space used: 717478739
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 56 (26.2 bits)