BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9Y2J8 (665 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4N2M-A nrPDB 1375 0.0 6CE1-A nrPDB 698 0.0 5HP5-A nrPDB 676 0.0 2DEY-X nrPDB 664 0.0 6C1Q-B nrPDB 35 0.097 2VCF-X nrPDB 33 0.49 1APX-A nrPDB 32 0.93 6EOR-A nrPDB 31 1.8 2ZBK-B nrPDB 30 3.1 5HFU-A nrPDB 30 4.2 >4N2M-A nrPDB Length = 690 Score = 1375 bits (3558), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/665 (99%), Positives = 664/665 (99%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE Sbjct: 22 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 81 Query: 61 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL Sbjct: 82 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 141 Query: 121 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 180 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD Sbjct: 142 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 201 Query: 181 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK 240 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK Sbjct: 202 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK 261 Query: 241 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT 300 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT Sbjct: 262 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT 321 Query: 301 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIEA 360 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEI FGYIEA Sbjct: 322 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIAFGYIEA 381 Query: 361 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN 420 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN Sbjct: 382 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN 441 Query: 421 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP 480 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP Sbjct: 442 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP 501 Query: 481 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE 540 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE Sbjct: 502 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE 561 Query: 541 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI 600 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI Sbjct: 562 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI 621 Query: 601 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW 660 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW Sbjct: 622 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW 681 Query: 661 WHMVP 665 WHMVP Sbjct: 682 WHMVP 686 >6CE1-A nrPDB Length = 686 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/667 (51%), Positives = 452/667 (67%), Gaps = 5/667 (0%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60 M +R VR+ AV V G D+Y + P G + F + + V + + + E Sbjct: 23 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 82 Query: 61 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120 + + RW + + V M+ S + + V ++Y+ +P+ A L+LT ++ISL Sbjct: 83 ERADTR-RWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISL 141 Query: 121 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 180 D D + +G ++N K W WGP G G ILLVNCDR+ P +D D+ V+ +DL+D Sbjct: 142 DCDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLED 201 Query: 181 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPF-FGQRYIHILGRRKLYHVV 239 MS M+LRT+GP L +++VL+ S D+ + VF++ P + Y H+LG+ K+ + V Sbjct: 202 MSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEV 261 Query: 240 KYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIM 299 G E FFVEGL FPD GF+GL+S HV+LL+ +D +PIFTDTV+FR+APWIM Sbjct: 262 PRLHGDEER-FFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIM 320 Query: 300 TPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIE 359 TP+ LPP+ V+VC +++N F+ V L K C+L +C Q NR DRWIQDE+E GY++ Sbjct: 321 TPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQ 380 Query: 360 APHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTV 419 APHK PVV DSPR+G L+DFP K +LGPDFGYVTREP SV+ LDSFGNLEVSPPV Sbjct: 381 APHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVA 440 Query: 420 NGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFV 479 NGK YPLGRILIG + P S GRR+T+VVRDFL AQ+VQ PVEL+ DWL VGHVDEF+SFV Sbjct: 441 NGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFV 500 Query: 480 PIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKG-LGGMSSKRITINKILSNESLV 538 P P K F +L+AS AC+KLF+EKQK GHG A++F+G + K I+IN++LSN+ L+ Sbjct: 501 PAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLI 560 Query: 539 QENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDL 598 N + Q C+DWNR++LK+ELGL E DIID+P LFK E +A AFFP++VNM+VL K L Sbjct: 561 NYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKT-ERKKATAFFPDLVNMLVLGKHL 619 Query: 599 GIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTF 658 GIPKPFGP + CCLE VR LLEPLGL CTFIDD + YH GEVHCGTNV RKPF+F Sbjct: 620 GIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSF 679 Query: 659 KWWHMVP 665 KWW+MVP Sbjct: 680 KWWNMVP 686 >5HP5-A nrPDB Length = 684 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/671 (52%), Positives = 453/671 (67%), Gaps = 14/671 (2%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVV--RDGEA 58 M +R V+L AV V+G D++S P GA +F + S V V +V R Sbjct: 22 MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 81 Query: 59 EEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEI 118 E + GK RW L + V++ AS E KV V+Y+ E+ + ++ L+LT ++I Sbjct: 82 EPI---GKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDI 138 Query: 119 SLDVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDL 178 SL+VD R G V+++ K +W WGPEG GAILLVNCDR+ + D + S DL Sbjct: 139 SLEVDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADL 198 Query: 179 KDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHV 238 +DMS M+L GPD+L +++VL + SDS +V VF Y +LG + L + Sbjct: 199 QDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYE 258 Query: 239 VKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWI 298 V+ G E+ F+VEGL FPD F GLVS+ VSL++ +P +FTDTV FR+APWI Sbjct: 259 VERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVD--PGTLPEVTLFTDTVGFRMAPWI 316 Query: 299 MTPNILPPVSVFVCCMKD----NYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIE 354 MTPN PP ++VC + D N FL+++ L K NC+L +C Q NR DRWIQDE+E Sbjct: 317 MTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEME 376 Query: 355 FGYIEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVS 414 FGYIEAPHK FPVV DSPR+ LKDFP K +LGPDFGYVTRE +SLDSFGNL+VS Sbjct: 377 FGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVS 436 Query: 415 PPVTVNGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDE 474 PPVTV G YPLGRILIGSSFP SGGR+M + VR+FLKAQQVQAPVELYSDWL+VGHVDE Sbjct: 437 PPVTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDE 496 Query: 475 FMSFVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSN 534 F++FVP K F LL+AS SAC KLF+EK+++G+GEA F GL + + +IN++L++ Sbjct: 497 FLTFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKR--SINEMLAD 554 Query: 535 ESLVQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVL 594 L ++NL+ Q+C+DWNR++LK+ELGL E DI+D+P LF + ++ A AFFP+MVNM+VL Sbjct: 555 RHLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFL-KNFYAEAFFPDMVNMVVL 613 Query: 595 DKDLGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRK 654 K LGIPKP+GP + CCLE V+ LLEPLGL C FIDD +YH+ GE+HCGTNVRRK Sbjct: 614 GKYLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRK 673 Query: 655 PFTFKWWHMVP 665 PF FKWW+MVP Sbjct: 674 PFPFKWWNMVP 684 >2DEY-X nrPDB Length = 671 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/668 (50%), Positives = 440/668 (65%), Gaps = 8/668 (1%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60 M + +R+ AV VLGT D+ S+AP +FS+ S V V++ A++ Sbjct: 9 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK 68 Query: 61 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120 +T G W L P + +TM AS KV ++YY + P +A L+LTA+EISL Sbjct: 69 KST-GSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPK--TPPVKALLYLTAVEISL 125 Query: 121 DVDADRDGVVEKNNPKK--ASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDL 178 D R G V+ K +WTWGP GQGAILLVNCDR+ DC D++V EDL Sbjct: 126 CADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDL 185 Query: 179 KDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHV 238 +DMS M L TK P + +VL+++ S+ DKV VF + +LG + H Sbjct: 186 QDMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHY 245 Query: 239 VKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWI 298 + GG + F+VE L FPD F GL+++ +SLL+ ++P +F D+V+FR+APWI Sbjct: 246 LMVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWI 305 Query: 299 MTPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYI 358 MTPN PP V+ C + +N FLK V L K C+L +C + N D+W+QDE+E GYI Sbjct: 306 MTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYI 365 Query: 359 EAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVT 418 +APHK PVV DSPR+ LK+FP+K ++GPDFGYVTR P ++ LDSFGNLEVSPPVT Sbjct: 366 QAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVT 425 Query: 419 VNGKTYPLGRILIG-SSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMS 477 V GK YPLGRIL G S +P + R+M + ++DFL AQQVQAPV+LYSDWL+VGHVDEF+S Sbjct: 426 VRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLS 485 Query: 478 FVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESL 537 FVP P K F LL+AS +CYKLF+E+Q +GHGEA++F+G+ K+ I ILSN++L Sbjct: 486 FVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGI--KKKKQQKIKNILSNKTL 543 Query: 538 VQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKD 597 + N + +RC+DWNR++LK+ELGL E DIID+P LFK+ E +A AFFPNMVNM+VL K Sbjct: 544 REHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKH 603 Query: 598 LGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFT 657 LGIPKPFGP + CCLE V LLEPLGL+CTFI+D YH GEVH GTNVRRKPF+ Sbjct: 604 LGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPFS 663 Query: 658 FKWWHMVP 665 FKWW+MVP Sbjct: 664 FKWWNMVP 671 >6C1Q-B nrPDB Length = 422 Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 84/216 (38%), Gaps = 31/216 (14%) Query: 338 CFQYLNRGDRWIQDEIEFGY---IEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVT 394 C + G WI + +G + P + VV + + FP K L G D+ + Sbjct: 230 CQNFRGAGLAWIACAVAWGLALLLTIPSFLYRVVRE-------EYFPPKVLCGVDYSHDK 282 Query: 395 REPLFESVTSLDSFGNLEVSPPVTVNGKTYPLGRILIGSSFPL--SGGRRMTKVVRDFLK 452 R ++ L V G +PL + I +F L + RR T+ + Sbjct: 283 RRERAVAIVRL-------------VLGFLWPLLTLTICYTFILLRTWSRRATRSTKTLKV 329 Query: 453 AQQVQAPVELYSDWLTVGHVDEFMSFVPIPGTKKFLLLMASTSACYKL-FREKQKDGHGE 511 V A ++ WL MSF+ P + FLLL S C + + Sbjct: 330 VVAVVASFFIF--WLPYQVTGIMMSFLE-PSSPTFLLLKKLDSLCVSFAYINCCINPIIY 386 Query: 512 AIMFKGLGGMSSKRI--TINKILSNESLVQENLYFQ 545 + +G G K + + +L+ ES+V+ENLYFQ Sbjct: 387 VVAGQGFQGRLRKSLPSLLRNVLTEESVVRENLYFQ 422 >2VCF-X nrPDB Length = 264 Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 549 DWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFF--PNMVNMIVLD 595 D RD+ K +GLT+QDI+ L + H+ R+ F P N ++ D Sbjct: 150 DHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 198 >1APX-A nrPDB Length = 249 Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 549 DWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFF--PNMVNMIVLD 595 D RD+ K +GL++QDI+ L + H+ R+ F P N ++ D Sbjct: 138 DHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFD 186 >6EOR-A nrPDB Length = 869 Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 15/90 (16%) Query: 317 NYLFLKEVKNLVEKTNC-----ELKVC------FQYLNRGDRWIQDEIEFG---YIEAPH 362 N + +K L KT C + K+C F ++N D W+ + IE G + H Sbjct: 168 NGFMVSPMKPLEIKTQCSGPRMDPKICPADPAFFSFINNSDLWVAN-IETGEERRLTFCH 226 Query: 363 KGFPVVLDSPRDGNLKDFPVKELLGPDFGY 392 +G VLD P+ + F ++E GY Sbjct: 227 QGLSNVLDDPKSAGVATFVIQEEFDRFTGY 256 >2ZBK-B nrPDB Length = 530 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%) Query: 556 KKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKD---LGIPKPFGP 606 KK LTE++I L FK DED R+ P+ ++ V+ +D LG+ K F P Sbjct: 283 KKVKNLTEEEITRLVETFKKDEDFRS----PSADSLSVIGEDLIELGLKKIFNP 332 >5HFU-A nrPDB Length = 923 Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 604 FGPQVEEECCLEMHVRGLLEPLGLECTFIDDI 635 F Q+E +C + VR +L+ LGLE T D I Sbjct: 792 FLSQIESDCLALLQVRAILQHLGLESTCDDSI 823 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4N2M-A nrPDB 1214 0.0 6CE1-A nrPDB 1145 0.0 5HP5-A nrPDB 1115 0.0 2DEY-X nrPDB 1100 0.0 Sequences not found previously or not previously below threshold: 6CET-M nrPDB 32 0.77 3EC2-A nrPDB 32 0.79 2ZBK-B nrPDB 30 3.1 4OC6-B nrPDB 30 3.5 3RAA-A nrPDB 30 4.2 3UX1-A nrPDB 30 4.3 3J1S-A nrPDB 30 4.6 5IPK-A nrPDB 29 5.2 3OAH-A nrPDB 29 5.5 3KIC-A nrPDB 29 5.5 3J4P-A nrPDB 29 5.6 3J1Q-A nrPDB 29 6.2 3NG9-A nrPDB 29 6.3 CONVERGED! >4N2M-A nrPDB Length = 690 Score = 1214 bits (3141), Expect = 0.0, Method: Composition-based stats. Identities = 664/665 (99%), Positives = 664/665 (99%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE Sbjct: 22 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 81 Query: 61 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL Sbjct: 82 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 141 Query: 121 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 180 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD Sbjct: 142 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 201 Query: 181 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK 240 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK Sbjct: 202 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHVVK 261 Query: 241 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT 300 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT Sbjct: 262 YTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMT 321 Query: 301 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIEA 360 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEI FGYIEA Sbjct: 322 PNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIAFGYIEA 381 Query: 361 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN 420 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN Sbjct: 382 PHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVN 441 Query: 421 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP 480 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP Sbjct: 442 GKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFVP 501 Query: 481 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE 540 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE Sbjct: 502 IPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESLVQE 561 Query: 541 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI 600 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI Sbjct: 562 NLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDLGI 621 Query: 601 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW 660 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW Sbjct: 622 PKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTFKW 681 Query: 661 WHMVP 665 WHMVP Sbjct: 682 WHMVP 686 >6CE1-A nrPDB Length = 686 Score = 1145 bits (2962), Expect = 0.0, Method: Composition-based stats. Identities = 345/667 (51%), Positives = 452/667 (67%), Gaps = 5/667 (0%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60 M +R VR+ AV V G D+Y + P G + F + + V + + + E Sbjct: 23 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 82 Query: 61 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120 + + RW + + V M+ S + + V ++Y+ +P+ A L+LT ++ISL Sbjct: 83 ERADTR-RWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISL 141 Query: 121 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 180 D D + +G ++N K W WGP G G ILLVNCDR+ P +D D+ V+ +DL+D Sbjct: 142 DCDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLED 201 Query: 181 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPF-FGQRYIHILGRRKLYHVV 239 MS M+LRT+GP L +++VL+ S D+ + VF++ P + Y H+LG+ K+ + V Sbjct: 202 MSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEV 261 Query: 240 KYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIM 299 G E FFVEGL FPD GF+GL+S HV+LL+ +D +PIFTDTV+FR+APWIM Sbjct: 262 PRLHGDEER-FFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIM 320 Query: 300 TPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYIE 359 TP+ LPP+ V+VC +++N F+ V L K C+L +C Q NR DRWIQDE+E GY++ Sbjct: 321 TPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQ 380 Query: 360 APHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTV 419 APHK PVV DSPR+G L+DFP K +LGPDFGYVTREP SV+ LDSFGNLEVSPPV Sbjct: 381 APHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVA 440 Query: 420 NGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFV 479 NGK YPLGRILIG + P S GRR+T+VVRDFL AQ+VQ PVEL+ DWL VGHVDEF+SFV Sbjct: 441 NGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFV 500 Query: 480 PIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKG-LGGMSSKRITINKILSNESLV 538 P P K F +L+AS AC+KLF+EKQK GHG A++F+G + K I+IN++LSN+ L+ Sbjct: 501 PAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLI 560 Query: 539 QENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDL 598 N + Q C+DWNR++LK+ELGL E DIID+P LFK E +A AFFP++VNM+VL K L Sbjct: 561 NYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKT-ERKKATAFFPDLVNMLVLGKHL 619 Query: 599 GIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTF 658 GIPKPFGP + CCLE VR LLEPLGL CTFIDD + YH GEVHCGTNV RKPF+F Sbjct: 620 GIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSF 679 Query: 659 KWWHMVP 665 KWW+MVP Sbjct: 680 KWWNMVP 686 >5HP5-A nrPDB Length = 684 Score = 1115 bits (2883), Expect = 0.0, Method: Composition-based stats. Identities = 350/671 (52%), Positives = 453/671 (67%), Gaps = 14/671 (2%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVV--RDGEA 58 M +R V+L AV V+G D++S P GA +F + S V V +V R Sbjct: 22 MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 81 Query: 59 EEVATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEI 118 E + GK RW L + V++ AS E KV V+Y+ E+ + ++ L+LT ++I Sbjct: 82 EPI---GKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDI 138 Query: 119 SLDVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDL 178 SL+VD R G V+++ K +W WGPEG GAILLVNCDR+ + D + S DL Sbjct: 139 SLEVDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADL 198 Query: 179 KDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHV 238 +DMS M+L GPD+L +++VL + SDS +V VF Y +LG + L + Sbjct: 199 QDMSPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSDYKQVLGPQCLSYE 258 Query: 239 VKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWI 298 V+ G E+ F+VEGL FPD F GLVS+ VSL++ +P +FTDTV FR+APWI Sbjct: 259 VERQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVD--PGTLPEVTLFTDTVGFRMAPWI 316 Query: 299 MTPNILPPVSVFVCCMKD----NYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIE 354 MTPN PP ++VC + D N FL+++ L K NC+L +C Q NR DRWIQDE+E Sbjct: 317 MTPNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEME 376 Query: 355 FGYIEAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVS 414 FGYIEAPHK FPVV DSPR+ LKDFP K +LGPDFGYVTRE +SLDSFGNL+VS Sbjct: 377 FGYIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVS 436 Query: 415 PPVTVNGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDE 474 PPVTV G YPLGRILIGSSFP SGGR+M + VR+FLKAQQVQAPVELYSDWL+VGHVDE Sbjct: 437 PPVTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDE 496 Query: 475 FMSFVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSN 534 F++FVP K F LL+AS SAC KLF+EK+++G+GEA F GL + + +IN++L++ Sbjct: 497 FLTFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGLKHQAKR--SINEMLAD 554 Query: 535 ESLVQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVL 594 L ++NL+ Q+C+DWNR++LK+ELGL E DI+D+P LF + ++ A AFFP+MVNM+VL Sbjct: 555 RHLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFL-KNFYAEAFFPDMVNMVVL 613 Query: 595 DKDLGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRK 654 K LGIPKP+GP + CCLE V+ LLEPLGL C FIDD +YH+ GE+HCGTNVRRK Sbjct: 614 GKYLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRK 673 Query: 655 PFTFKWWHMVP 665 PF FKWW+MVP Sbjct: 674 PFPFKWWNMVP 684 >2DEY-X nrPDB Length = 671 Score = 1100 bits (2844), Expect = 0.0, Method: Composition-based stats. Identities = 336/668 (50%), Positives = 440/668 (65%), Gaps = 8/668 (1%) Query: 1 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 60 M + +R+ AV VLGT D+ S+AP +FS+ S V V++ A++ Sbjct: 9 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK 68 Query: 61 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 120 +T G W L P + +TM AS KV ++YY + P +A L+LTA+EISL Sbjct: 69 KST-GSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPK--TPPVKALLYLTAVEISL 125 Query: 121 DVDADRDGVVEKNNPKK--ASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDL 178 D R G V+ K +WTWGP GQGAILLVNCDR+ DC D++V EDL Sbjct: 126 CADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDL 185 Query: 179 KDMSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPFFGQRYIHILGRRKLYHV 238 +DMS M L TK P + +VL+++ S+ DKV VF + +LG + H Sbjct: 186 QDMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGKLSSKCSVVLGPKWPSHY 245 Query: 239 VKYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWI 298 + GG + F+VE L FPD F GL+++ +SLL+ ++P +F D+V+FR+APWI Sbjct: 246 LMVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWI 305 Query: 299 MTPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIEFGYI 358 MTPN PP V+ C + +N FLK V L K C+L +C + N D+W+QDE+E GYI Sbjct: 306 MTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYI 365 Query: 359 EAPHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVT 418 +APHK PVV DSPR+ LK+FP+K ++GPDFGYVTR P ++ LDSFGNLEVSPPVT Sbjct: 366 QAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVT 425 Query: 419 VNGKTYPLGRILIG-SSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMS 477 V GK YPLGRIL G S +P + R+M + ++DFL AQQVQAPV+LYSDWL+VGHVDEF+S Sbjct: 426 VRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLS 485 Query: 478 FVPIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGLGGMSSKRITINKILSNESL 537 FVP P K F LL+AS +CYKLF+E+Q +GHGEA++F+G+ ++I ILSN++L Sbjct: 486 FVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIK--NILSNKTL 543 Query: 538 VQENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKD 597 + N + +RC+DWNR++LK+ELGL E DIID+P LFK+ E +A AFFPNMVNM+VL K Sbjct: 544 REHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGKH 603 Query: 598 LGIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFT 657 LGIPKPFGP + CCLE V LLEPLGL+CTFI+D YH GEVH GTNVRRKPF+ Sbjct: 604 LGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPFS 663 Query: 658 FKWWHMVP 665 FKWW+MVP Sbjct: 664 FKWWNMVP 671 >6CET-M nrPDB Length = 569 Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 257 FPDEGFSGLV---SIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIMTPNILPPVSVFVCC 313 FP ++ S+ VSL E+ PL P +T + ++ W++ +L + +VC Sbjct: 356 FPSHDLPSVLAKFSLPVSLSEFRN---PLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCL 412 Query: 314 M 314 M Sbjct: 413 M 413 >3EC2-A nrPDB Length = 180 Score = 32.3 bits (72), Expect = 0.79, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 8/85 (9%) Query: 476 MSFVPIPGTKKFLLLMASTSACYKLFREKQKDGH---GEAIMF--KGLGGMSSKRITINK 530 ++FV PG K L +A+ A ++ +K G+ + ++F K L + Sbjct: 41 LTFVGSPGVGKTHLAVATLKA---IYEKKGIRGYFFDTKDLIFRLKHLMDEGKDTKFLKT 97 Query: 531 ILSNESLVQENLYFQRCLDWNRDIL 555 +L++ LV ++L +R DW R+++ Sbjct: 98 VLNSPVLVLDDLGSERLSDWQRELI 122 >2ZBK-B nrPDB Length = 530 Score = 30.0 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 7/54 (12%) Query: 556 KKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKD---LGIPKPFGP 606 KK LTE++I L FK DED R+ P+ ++ V+ +D LG+ K F P Sbjct: 283 KKVKNLTEEEITRLVETFKKDEDFRS----PSADSLSVIGEDLIELGLKKIFNP 332 >4OC6-B nrPDB Length = 243 Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%) Query: 512 AIMFKGLGGMSSKRITINKILSNESLVQENLYFQRCLDWN 551 A F G+ GM+ RI++N +L V +NL Q+ +D N Sbjct: 23 AAKFDGILGMAYPRISVNNVLP----VFDNLMQQKLVDQN 58 >3RAA-A nrPDB Length = 519 Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 8/94 (8%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVNGK-- 422 P VL S G L FP + P +GY+T ++V SF LE P + Sbjct: 134 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFPSQMLRTGNN 192 Query: 423 ---TYPLGRILIGSSFPLSGG--RRMTKVVRDFL 451 TY + SS+ S R M ++ +L Sbjct: 193 FQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYL 226 >3UX1-A nrPDB Length = 518 Score = 29.6 bits (65), Expect = 4.3, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSP 415 P VL S +G L FP + P +GY+T ++V SF LE P Sbjct: 134 LPYVLGSAHEGCLPPFPADVFMIPQYGYLTLNDGSQAV-GRSSFYCLEYFP 183 >3J1S-A nrPDB Length = 519 Score = 29.6 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSP 415 P VL S G L FP + P +GY+T ++V SF LE P Sbjct: 134 LPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNNGSQAV-GRSSFYCLEYFP 183 >5IPK-A nrPDB Length = 735 Score = 29.2 bits (64), Expect = 5.2, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSP 415 P VL S G L FP + P +GY+T ++V SF LE P Sbjct: 350 LPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNNGSQAV-GRSSFYCLEYFP 399 >3OAH-A nrPDB Length = 534 Score = 29.2 bits (64), Expect = 5.5, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSP 415 P VL S G L FP + P +GY+T ++V SF LE P Sbjct: 149 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFP 198 >3KIC-A nrPDB Length = 736 Score = 29.2 bits (64), Expect = 5.5, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSP 415 P VL S G L FP + P +GY+T ++V SF LE P Sbjct: 350 LPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNNGSQAV-GRSSFYCLEYFP 399 >3J4P-A nrPDB Length = 517 Score = 29.2 bits (64), Expect = 5.6, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 8/94 (8%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVNGK-- 422 P VL S G L FP + P +GY+T ++V SF LE P + Sbjct: 132 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFPSQMLRTGNN 190 Query: 423 ---TYPLGRILIGSSFPLSGG--RRMTKVVRDFL 451 TY + SS+ S R M ++ +L Sbjct: 191 FQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYL 224 >3J1Q-A nrPDB Length = 737 Score = 29.2 bits (64), Expect = 6.2, Method: Composition-based stats. Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 8/94 (8%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTVNGK-- 422 P VL S G L FP + P +GY+T ++V SF LE P + Sbjct: 352 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFPSQMLRTGNN 410 Query: 423 ---TYPLGRILIGSSFPLSGG--RRMTKVVRDFL 451 TY + SS+ S R M ++ +L Sbjct: 411 FQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYL 444 >3NG9-A nrPDB Length = 736 Score = 29.2 bits (64), Expect = 6.3, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 365 FPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSP 415 P VL S G L FP + P +GY+T ++V SF LE P Sbjct: 351 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFP 400 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.137 0.409 Lambda K H 0.267 0.0423 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,291,101 Number of Sequences: 36641 Number of extensions: 1201641 Number of successful extensions: 2553 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 2514 Number of HSP's gapped (non-prelim): 29 length of query: 665 length of database: 10,336,785 effective HSP length: 103 effective length of query: 562 effective length of database: 6,562,762 effective search space: 3688272244 effective search space used: 3688272244 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (28.8 bits)