BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9Y251 (543 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5LA7-A nrPDB 1041 0.0 5E9C-A nrPDB 790 0.0 5L77-A nrPDB 41 0.001 5J77-A nrPDB 33 0.22 4OON-A nrPDB 32 0.96 4MOP-A nrPDB 30 1.8 1XF1-A nrPDB 30 3.2 5WTZ-A nrPDB 28 8.9 >5LA7-A nrPDB Length = 509 Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 507/509 (99%), Positives = 508/509 (99%) Query: 35 AQDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRF 94 QDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRF Sbjct: 1 GQDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRF 60 Query: 95 GGTKTDFLIFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLRE 154 GGTKTDFLIFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLRE Sbjct: 61 GGTKTDFLIFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLRE 120 Query: 155 HYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSK 214 HYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSK Sbjct: 121 HYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSK 180 Query: 215 GYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRK 274 GYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRK Sbjct: 181 GYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRK 240 Query: 275 TAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIFISSVQKVFQVVESTR 334 TAKMLKSFLKAGGEVIDSVTWHHYYLNGRTAT+EDFLNPDVLDIFISSVQKVFQVVESTR Sbjct: 241 TAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATREDFLNPDVLDIFISSVQKVFQVVESTR 300 Query: 335 PGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV 394 PGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV Sbjct: 301 PGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV 360 Query: 395 DENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYA 454 DENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYA Sbjct: 361 DENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYA 420 Query: 455 INLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEK 514 INLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEK Sbjct: 421 INLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEK 480 Query: 515 PLRPGSSLGLPAFSYSFFVIRNAKVAACI 543 PLRPGSSLGLPAFSYSFFVIRNAKVAACI Sbjct: 481 PLRPGSSLGLPAFSYSFFVIRNAKVAACI 509 >5E9C-A nrPDB Length = 389 Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/386 (99%), Positives = 386/386 (100%) Query: 158 KKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYN 217 KKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYN Sbjct: 4 KKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYN 63 Query: 218 ISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAK 277 ISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAK Sbjct: 64 ISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAK 123 Query: 278 MLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGK 337 MLKSFLKAGGEVIDSVTWHHYYLNGRTAT+EDFLNPDVLDIFISSVQKVFQVVESTRPGK Sbjct: 124 MLKSFLKAGGEVIDSVTWHHYYLNGRTATREDFLNPDVLDIFISSVQKVFQVVESTRPGK 183 Query: 338 KVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDEN 397 KVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDEN Sbjct: 184 KVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDEN 243 Query: 398 FDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINL 457 FDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINL Sbjct: 244 FDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINL 303 Query: 458 HNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLR 517 HNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLR Sbjct: 304 HNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLR 363 Query: 518 PGSSLGLPAFSYSFFVIRNAKVAACI 543 PGSSLGLPAFSYSFFVIRNAKVAACI Sbjct: 364 PGSSLGLPAFSYSFFVIRNAKVAACI 389 >5L77-A nrPDB Length = 495 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 111/287 (38%), Gaps = 30/287 (10%) Query: 169 SVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNS 228 +V+ L F + +G LI+GLN T + N+++ + ++++LGNEP+ Sbjct: 140 AVNNLSEFLDKTGWKLIYGLNLGKGTPE---NAADEAAYVMETIGADRLLAFQLGNEPDL 196 Query: 229 FLKKA--DIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAG 286 F + + + D+ + +RK NA GPD + F K Sbjct: 197 FYRNGIRPASYDFAAYAGDWQRFFTAIRKRV-PNAPFAGPDTAYNTKWLVPFADKF-KHD 254 Query: 287 GEVIDSVTWHHYYLNGR----TATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLG 342 + I S HYY G + T E + P+ + + QV T G L Sbjct: 255 VKFISS----HYYAEGPPTDPSMTIERLMKPNPR--LLGETAGLKQVEADT--GLPFRLT 306 Query: 343 ETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV-------D 395 +T+S Y GG +SDTFAA D + A G + F G Y + Sbjct: 307 QTNSCYQGGKQGVSDTFAAALWAGDLMYQQAAAG----STGINFHGGGYGWYTPVAGTPE 362 Query: 396 ENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDN 442 + F P+Y+ LLF + ++L A + + L TD Sbjct: 363 DGFIARPEYYGMLLFAQAGAGQLLGAKLTDNSAAPLLTAYALRGTDG 409 >5J77-A nrPDB Length = 508 Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust. Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 58/222 (26%) Query: 239 GSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEV--------- 289 GS++G D+I HK + T + G + Q + +A M K L+ GG+ Sbjct: 205 GSEIG-DYIVEHKKVNLITMTGSTATGQRIMQ--KASANMAKLILELGGKAPFMVWKDAD 261 Query: 290 ----IDSVTWHHYYLNGRT--ATKEDFLNPDVLDIFIS---------------------- 321 + ++ W Y+ G++ A + +++ D+ D F+S Sbjct: 262 MDNALKTLLWAKYWNAGQSCIAAERLYVHEDIYDTFMSRFVELSRKLALGDPKNADMGPL 321 Query: 322 ----SVQKVFQVVESTRP-GKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMG 376 ++Q ++VE + G K+ +GG P LS + G+ +L + +A Sbjct: 322 INKGALQATSEIVEEAKESGAKI-------LFGGSQPSLSGPYRNGYFFLPTIIGNADQK 374 Query: 377 IEVVMRQVF---FGAGNYHLVDENFDPLPD--YWL-SLLFKK 412 ++ ++F GA V+E +D D Y L S LF K Sbjct: 375 SKIFQEEIFAPVIGARKISSVEEMYDLANDNKYGLASYLFTK 416 >4OON-A nrPDB Length = 795 Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 11/97 (11%) Query: 205 QLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLY 264 Q+ L S G IS E G + ++ ADI +DFI H LL A Y Sbjct: 18 QIPLKVYSEDGKLIS-EFGEMRRTPIRFADI-------PQDFI--HALLSAEDDNFANHY 67 Query: 265 GPDVGQPRRKTAKMLKS-FLKAGGEVIDSVTWHHYYL 300 G DV R A++LKS ++ GG I +Y+L Sbjct: 68 GVDVKSLMRAAAQLLKSGHIQTGGSTITMQVAKNYFL 104 >4MOP-A nrPDB Length = 633 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 9/42 (21%), Positives = 25/42 (59%) Query: 105 DPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPY 146 +P+ + F+ W +Q+++D YG++ ++ +L ++W + Sbjct: 432 EPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRF 473 >1XF1-A nrPDB Length = 926 Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 10/100 (10%) Query: 130 GSIPPDVEEKLRLE--WPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCSG--LDLI 185 G+ P + +E RLE P + LL+R + Y+R+ + N +++ Sbjct: 98 GNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLAD--YARNYAQAIRDAINLGAKVINMS 155 Query: 186 FGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNE 225 FG NA L A+L + A DY SKG +I GN+ Sbjct: 156 FG-NAALAYANLPDETKKA---FDYAKSKGVSIVTSAGND 191 >5WTZ-A nrPDB Length = 421 Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 396 ENFDPLPDYWL--SLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRY 445 EN + WL ++ K + T VL ++ +RKL + LH N N Y Sbjct: 321 ENVSKFKEKWLGKTIPVKTFISTTVLSNNISAFAKRKLILRLHLPNGSNAAY 372 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5LA7-A nrPDB 969 0.0 5E9C-A nrPDB 710 0.0 5L77-A nrPDB 360 e-100 Sequences not found previously or not previously below threshold: 4EKJ-A nrPDB 50 3e-06 1UHV-A nrPDB 45 9e-05 5U22-A nrPDB 35 0.071 2BS9-A nrPDB 34 0.16 4MOP-A nrPDB 33 0.43 1B3Z-A nrPDB 33 0.47 1TA3-B nrPDB 32 0.62 4MIF-A nrPDB 32 0.91 6HIV-Ca nrPDB 31 1.3 3RJ8-A nrPDB 31 1.8 5LZ5-A nrPDB 30 2.0 1YVD-A nrPDB 30 2.7 >5LA7-A nrPDB Length = 509 Score = 969 bits (2505), Expect = 0.0, Method: Composition-based stats. Identities = 507/509 (99%), Positives = 508/509 (99%) Query: 35 AQDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRF 94 QDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRF Sbjct: 1 GQDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRF 60 Query: 95 GGTKTDFLIFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLRE 154 GGTKTDFLIFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLRE Sbjct: 61 GGTKTDFLIFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLRE 120 Query: 155 HYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSK 214 HYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSK Sbjct: 121 HYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSK 180 Query: 215 GYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRK 274 GYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRK Sbjct: 181 GYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRK 240 Query: 275 TAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIFISSVQKVFQVVESTR 334 TAKMLKSFLKAGGEVIDSVTWHHYYLNGRTAT+EDFLNPDVLDIFISSVQKVFQVVESTR Sbjct: 241 TAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATREDFLNPDVLDIFISSVQKVFQVVESTR 300 Query: 335 PGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV 394 PGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV Sbjct: 301 PGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV 360 Query: 395 DENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYA 454 DENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYA Sbjct: 361 DENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYA 420 Query: 455 INLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEK 514 INLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEK Sbjct: 421 INLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEK 480 Query: 515 PLRPGSSLGLPAFSYSFFVIRNAKVAACI 543 PLRPGSSLGLPAFSYSFFVIRNAKVAACI Sbjct: 481 PLRPGSSLGLPAFSYSFFVIRNAKVAACI 509 >5E9C-A nrPDB Length = 389 Score = 710 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 385/386 (99%), Positives = 386/386 (100%) Query: 158 KKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYN 217 KKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYN Sbjct: 4 KKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYN 63 Query: 218 ISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAK 277 ISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAK Sbjct: 64 ISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAK 123 Query: 278 MLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPGK 337 MLKSFLKAGGEVIDSVTWHHYYLNGRTAT+EDFLNPDVLDIFISSVQKVFQVVESTRPGK Sbjct: 124 MLKSFLKAGGEVIDSVTWHHYYLNGRTATREDFLNPDVLDIFISSVQKVFQVVESTRPGK 183 Query: 338 KVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDEN 397 KVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDEN Sbjct: 184 KVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDEN 243 Query: 398 FDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINL 457 FDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINL Sbjct: 244 FDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINL 303 Query: 458 HNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLR 517 HNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLR Sbjct: 304 HNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPLMEKPLR 363 Query: 518 PGSSLGLPAFSYSFFVIRNAKVAACI 543 PGSSLGLPAFSYSFFVIRNAKVAACI Sbjct: 364 PGSSLGLPAFSYSFFVIRNAKVAACI 389 >5L77-A nrPDB Length = 495 Score = 360 bits (924), Expect = e-100, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 111/287 (38%), Gaps = 30/287 (10%) Query: 169 SVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLDYCSSKGYNISWELGNEPNS 228 +V+ L F + +G LI+GLN T + N+++ + ++++LGNEP+ Sbjct: 140 AVNNLSEFLDKTGWKLIYGLNLGKGTPE---NAADEAAYVMETIGADRLLAFQLGNEPDL 196 Query: 229 FLKKA--DIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAG 286 F + + + D+ + +RK NA GPD + F K Sbjct: 197 FYRNGIRPASYDFAAYAGDWQRFFTAIRKRV-PNAPFAGPDTAYNTKWLVPFADKF-KHD 254 Query: 287 GEVIDSVTWHHYYLNGR----TATKEDFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLG 342 + I S HYY G + T E + P+ + + QV T G L Sbjct: 255 VKFISS----HYYAEGPPTDPSMTIERLMKPNPR--LLGETAGLKQVEADT--GLPFRLT 306 Query: 343 ETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLV-------D 395 +T+S Y GG +SDTFAA D + A G + F G Y + Sbjct: 307 QTNSCYQGGKQGVSDTFAAALWAGDLMYQQAAAG----STGINFHGGGYGWYTPVAGTPE 362 Query: 396 ENFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDN 442 + F P+Y+ LLF + ++L A + + L TD Sbjct: 363 DGFIARPEYYGMLLFAQAGAGQLLGAKLTDNSAAPLLTAYALRGTDG 409 >4EKJ-A nrPDB Length = 500 Score = 50.0 bits (118), Expect = 3e-06, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 16/157 (10%) Query: 220 WELGNEPNS--FLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAK 277 +E+ NEPN F +KAD + E + + + K+ + ++ GP + Sbjct: 158 FEVWNEPNLDGFWEKADQ----AAYFELYDVTARAI-KAIDPSLRVGGPATA-GAAWVPE 211 Query: 278 MLKSFLKAGGEVIDSVTWHHYYLNG----RTATKEDFLNPDVLDIFISSVQKVF-QVVES 332 L + +K G +D VT H Y ++G ++ L+P D + V++V Q+ S Sbjct: 212 FL-AHVKKSGSAVDFVTTHTYGVDGGFLDEKGVQDTKLSPSP-DAVVGDVRRVREQIEAS 269 Query: 333 TRPGKKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKL 369 PG ++ E S++Y + D++ + ++KL Sbjct: 270 AFPGLPLYFTEWSTSYT-PRDSVHDSYVSAAYIVEKL 305 >1UHV-A nrPDB Length = 500 Score = 45.0 bits (105), Expect = 9e-05, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 81/217 (37%), Gaps = 35/217 (16%) Query: 220 WELGNEPNS--FLKKADIFINGSQLGEDFIQLHKLLRKS---TFKNAKLYGPDV-GQPRR 273 +E+ NEPN F K AD +++ +L+K+ K+ +N K+ GP + G Sbjct: 155 FEIWNEPNLKEFWKDAD--------EKEYFKLYKVTAKAIKEVNENLKVGGPAICGGADY 206 Query: 274 KTAKMLKSFLKAGGEVIDSVTWHHYYLN----GRTATKEDFLNPDVLDIFISSVQKVFQV 329 L F +D V+ H Y ++ + + ++ + V ++ Sbjct: 207 WIEDFLN-FCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIM---PSEYMLNEFKTVREI 262 Query: 330 VESTR-PGKKVWLGETSSAYGGGAPLLSDTFAAGFMW--LDKLGLSARMGIEVVMRQVF- 385 ++++ P + E +++Y P+ F A ++ L + G VF Sbjct: 263 IKNSHFPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSDVFE 322 Query: 386 --------FGAGNYHLVDENFDPLPDYWLSLLFKKLV 414 F G + LV N P P ++ F + Sbjct: 323 ERDVPRSQFHGG-FGLVALNMIPKPTFYTFKFFNAMG 358 >5U22-A nrPDB Length = 423 Score = 35.4 bits (80), Expect = 0.071, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 5/76 (6%) Query: 221 ELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLK 280 E+ NEP+ K + NG + + Q + LLR+ N K+ GP K Sbjct: 143 EIWNEPDVTWKDS----NGLSFNQMWKQTYDLLRQ-IDPNEKIIGPSFSWYEENKMKNFL 197 Query: 281 SFLKAGGEVIDSVTWH 296 F K + D + WH Sbjct: 198 QFSKQNNCLPDIIAWH 213 >2BS9-A nrPDB Length = 503 Score = 34.2 bits (77), Expect = 0.16, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 77/212 (36%), Gaps = 24/212 (11%) Query: 220 WELGNEPNS--FLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDV-GQPRRKTA 276 +E+ NEPN F K A N + + + + + KS + ++ GP + G Sbjct: 155 FEVWNEPNLVNFWKDA----NKQEYFKLYEVTARAV-KSVDPHLQVGGPAICGGSDEWIT 209 Query: 277 KMLKSFLKAGGEVIDSVTWHHYYLNGR-TATKEDFLNP-DVLDIFISSVQKVFQVV-EST 333 L F +D V+ H Y T E + + + + + V ++ +S Sbjct: 210 DFL-HFCAERRVPVDFVSRHAYTSKAPHKKTFEYYYQELEPPEDMLEQFKTVRALIRQSP 268 Query: 334 RPGKKVWLGETSSAYGGGAPLLSDTFAAGFMW------LDKL-----GLSARMGIEVVMR 382 P + + E +++Y P+ A ++ D + + + E+ + Sbjct: 269 FPHLPLHITEYNTSYSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSDVFEEMDVP 328 Query: 383 QVFFGAGNYHLVDENFDPLPDYWLSLLFKKLV 414 + F G + LV + P P + F L Sbjct: 329 KALFHGG-FGLVALHSIPKPTFHAFTFFNALG 359 >4MOP-A nrPDB Length = 633 Score = 32.7 bits (73), Expect = 0.43, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 25/42 (59%) Query: 105 DPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPY 146 +P+ + F+ W +Q+++D YG++ ++ +L ++W + Sbjct: 432 EPQVTTLFQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRF 473 >1B3Z-A nrPDB Length = 302 Score = 32.7 bits (73), Expect = 0.47, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 24/145 (16%) Query: 165 YSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSS--NAQLLLD---------YCSS 213 ++ S D L FA +G LI G + + W SS + L+ Sbjct: 62 FTFSGSDYLVNFAQSNG-KLIRGHTLVWHSQLPGWVSSITDKNTLISVLKNHITTVMTRY 120 Query: 214 KGYNISWELGNE---PNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPD--- 267 KG +W++ NE + L+ + +F N +GED++++ +S NAKLY D Sbjct: 121 KGKIYAWDVLNEIFNEDGSLRNS-VFYN--VIGEDYVRIAFETARSVDPNAKLYINDYNL 177 Query: 268 --VGQPR-RKTAKMLKSFLKAGGEV 289 G + +K +L AG + Sbjct: 178 DSAGYSKVNGMVSHVKKWLAAGIPI 202 >1TA3-B nrPDB Length = 303 Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 12/102 (11%) Query: 214 KGYNISWELGNE---PNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQ 270 KG + W++ NE + + + +F N LGEDF+++ ++ +AKLY D Sbjct: 119 KGKIMHWDVVNEIFNEDGTFRNS-VFYNL--LGEDFVRIAFETARAADPDAKLYINDYNL 175 Query: 271 P------RRKTAKMLKSFLKAGGEVIDSVTWHHYYLNGRTAT 306 + A +K +L G + + HY + ++T Sbjct: 176 DSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWSST 217 >4MIF-A nrPDB Length = 620 Score = 31.5 bits (70), Expect = 0.91, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 37/66 (56%), Gaps = 10/66 (15%) Query: 105 DPKKEST--FEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPY------QE--QLLLRE 154 DP+ + T F E W Q+++D YG++ +++ ++ +++ + QE +L+ ++ Sbjct: 436 DPEPQVTIKFTEEHPWHVQIHRDAFSYGAVAENMDTRVIVDYRFFGYTEPQEANELVFQQ 495 Query: 155 HYQKKF 160 HY+ + Sbjct: 496 HYRDAY 501 >6HIV-Ca nrPDB Length = 602 Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 11/111 (9%) Query: 152 LREHYQKKFKNSTYSRSSVDVLYTFA-------NCSGLDLIFGLNALLRTADLQWNSSNA 204 LREH+ ++ + S VD+L+ A N L L T + + Sbjct: 194 LREHFDRRIRPLLAVMSPVDILWLEALTQNSPHNKEQLQRKIAFQTSLGTPEFF----DM 249 Query: 205 QLLLDYCSSKGYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRK 255 L Y ++ Y + ELG E + KA +L + + L+RK Sbjct: 250 SKRLRYEINEDYKVRDELGPELFALWSKAPERWPPERLSKMYGLDFTLVRK 300 >3RJ8-A nrPDB Length = 473 Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 25/169 (14%) Query: 352 APLLSDTFAAGFMWLDKLGLSARMGIEVVM--------RQVFFGAGNYHLVDENFDPL-- 401 AP + F W +K SA GIE V R+V F G+Y + + L Sbjct: 207 APKVLTRFGVTLNWKNKT--SALKGIEAVEDYARWVAPREVNFRIGDYGAGNPGIEGLYY 264 Query: 402 --PDYWLSL---LFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTD--NPRYKEG----DL 450 P+ W + L L V+ + + + Y + + D P+ E L Sbjct: 265 GTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNFDHVDFITPQPVENFYAKSL 324 Query: 451 TLYAINLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLT 499 TL +I V ++ + SNK D++ L HG K+ Q+ +T Sbjct: 325 TLKSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHG--GKNSQVTKVT 371 >5LZ5-A nrPDB Length = 388 Score = 30.4 bits (67), Expect = 2.0, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 17/88 (19%) Query: 459 NVTKYLRLPYP-----------FSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQT 507 N +LRL YP NK+ L + LG H L+ ++L + T Sbjct: 31 NKGTFLRLYYPSQDNDRLDTLWIPNKEYFWGLSKFLGTHWLMGNILRL------LFGSMT 84 Query: 508 LPPLMEKPLRPGSSLGLPAFSYSFFVIR 535 P PLRPG L FS+ R Sbjct: 85 TPANWNSPLRPGEKYPLVVFSHGLGAFR 112 >1YVD-A nrPDB Length = 169 Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 85 RGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQSQVNQ 124 R L+P Y R G+ +++D KE TF W ++ Q Sbjct: 68 RALAPMYYR--GSAAAIIVYDITKEETFSTLKNWVRELRQ 105 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.137 0.403 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,034,356 Number of Sequences: 36641 Number of extensions: 993806 Number of successful extensions: 2568 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 2550 Number of HSP's gapped (non-prelim): 32 length of query: 543 length of database: 10,336,785 effective HSP length: 102 effective length of query: 441 effective length of database: 6,599,403 effective search space: 2910336723 effective search space used: 2910336723 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 62 (28.5 bits)