BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9ULW8 (664 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6CE1-A nrPDB 1375 0.0 5HP5-A nrPDB 759 0.0 2DEY-X nrPDB 723 0.0 4N2M-A nrPDB 697 0.0 1KEH-A nrPDB 32 1.2 2AE5-B nrPDB 30 2.3 4HPF-A nrPDB 30 4.2 1OMX-A nrPDB 29 6.3 2BG9-A nrPDB 29 6.4 4H3S-A nrPDB 29 6.8 4AQ5-A nrPDB 29 6.9 >6CE1-A nrPDB Length = 686 Score = 1375 bits (3558), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/664 (100%), Positives = 664/664 (100%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR Sbjct: 23 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 82 Query: 61 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD Sbjct: 83 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 142 Query: 121 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM 180 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM Sbjct: 143 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM 202 Query: 181 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP 240 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP Sbjct: 203 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP 262 Query: 241 RLHGDEERFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMTP 300 RLHGDEERFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMTP Sbjct: 263 RLHGDEERFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMTP 322 Query: 301 STLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQAP 360 STLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQAP Sbjct: 323 STLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQAP 382 Query: 361 HKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANG 420 HKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANG Sbjct: 383 HKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANG 442 Query: 421 KEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPA 480 KEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPA Sbjct: 443 KEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPA 502 Query: 481 PDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLINY 540 PDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLINY Sbjct: 503 PDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLINY 562 Query: 541 NKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGKHLGIP 600 NKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGKHLGIP Sbjct: 563 NKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGKHLGIP 622 Query: 601 KPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSFKWW 660 KPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSFKWW Sbjct: 623 KPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSFKWW 682 Query: 661 NMVP 664 NMVP Sbjct: 683 NMVP 686 >5HP5-A nrPDB Length = 684 Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/669 (57%), Positives = 473/669 (70%), Gaps = 11/669 (1%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 M+ +R+V++SL+ PT AVCV GVE VDI+ VP+G F V G+ GV++++ N R + Sbjct: 22 MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 81 Query: 61 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120 E RW D +++V + + S +L D V++SY E L +VLYLT VDISL+ Sbjct: 82 EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 141 Query: 121 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM 180 D G+ R+ DK+ W WGP GYG ILLVNCDRD+ D + L DL+DM Sbjct: 142 VDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDM 201 Query: 181 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP 240 S M+L GP LFD HKLVL+ D+KR +VF G + + Y+ VLG +SYEV Sbjct: 202 SPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSD-YKQVLGPQCLSYEVE 260 Query: 241 RLHGDEE-RFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMT 299 R G++E +F+VEGL+FPDA F GL+S V+L+D +FTDTV FR+APWIMT Sbjct: 261 RQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGT--LPEVTLFTDTVGFRMAPWIMT 318 Query: 300 PSTLPPLEVYVCRVRN----NTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELG 355 P+T PP E+YVCRV + N F++ ++ L KA CKLTICPQ ENRNDRWIQDEME G Sbjct: 319 PNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEFG 378 Query: 356 YVQAPHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPP 415 Y++APHK+ PVVFDSPRN L+DFPYKRILGPDFGYVTRE S LDSFGNL+VSPP Sbjct: 379 YIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSPP 438 Query: 416 VVANGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFL 475 V G EYPLGRILIG + P S GR++ + VR+FL AQ+VQ PVEL+ DWL+VGHVDEFL Sbjct: 439 VTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDEFL 498 Query: 476 SFVPAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNK 535 +FVP D KGFR+LLASP AC KLFQEK++ G+G A F G+ Q K SIN++L+++ Sbjct: 499 TFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGL--KHQAKR-SINEMLADR 555 Query: 536 DLINYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGK 595 L N Q CIDWNR VLKRELGLAE DI+DIPQLF + A AFFPD+VNM+VLGK Sbjct: 556 HLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNFYAEAFFPDMVNMVVLGK 615 Query: 596 HLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPF 655 +LGIPKP+GPIING CCLEEKV+SLLEPLGLHC FIDD+ YH L GE+HCGTNV RKPF Sbjct: 616 YLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPF 675 Query: 656 SFKWWNMVP 664 FKWWNMVP Sbjct: 676 PFKWWNMVP 684 >2DEY-X nrPDB Length = 671 Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/669 (55%), Positives = 462/669 (69%), Gaps = 11/669 (1%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 M+ ++RV+ E PT AVCV G T +DI S PE F + +PGV + I+ + + Sbjct: 9 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK 68 Query: 61 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120 + + W D +E+ + M + S D VQISY+ P P+ A+LYLT V+ISL Sbjct: 69 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTP-PVK-ALLYLTAVEISLC 126 Query: 121 CDLNCEGR--QDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLE 178 D+ G+ R D+R W WGP G G ILLVNCDRD+ D D V +DL+ Sbjct: 127 ADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQ 186 Query: 179 DMSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYE 238 DMS+M L T+ P F +H LVLH + + + +VF + + VLG S+ Sbjct: 187 DMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGK-LSSKCSVVLGPKWPSHY 245 Query: 239 VPRLHGDEER-FFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWI 297 + G F+VE L+FPD F GLI+ ++LLD SN + + +F D+VVFRVAPWI Sbjct: 246 LMVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWI 305 Query: 298 MTPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYV 357 MTP+T PP EVY C + N F+ +V LA KA CKLTICP+ EN +D+W+QDEME+GY+ Sbjct: 306 MTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYI 365 Query: 358 QAPHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVV 417 QAPHKTLPVVFDSPRN L++FP KR++GPDFGYVTR P+ +SGLDSFGNLEVSPPV Sbjct: 366 QAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVT 425 Query: 418 ANGKEYPLGRILIGGN-LPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLS 476 GKEYPLGRIL G + P + R++ Q ++DFL AQ+VQ PV+L+ DWL+VGHVDEFLS Sbjct: 426 VRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLS 485 Query: 477 FVPAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKD 536 FVPAPD KGFR+LLASP +C+KLFQE+Q GHG ALLF+G+ +Q K +I LSNK Sbjct: 486 FVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNI---LSNKT 542 Query: 537 LINYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFK-TERKKATAFFPDLVNMLVLGK 595 L +N FV+ CIDWNRE+LKRELGLAE DIIDIPQLFK E KA AFFP++VNMLVLGK Sbjct: 543 LREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGK 602 Query: 596 HLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPF 655 HLGIPKPFGP+ING CCLEEKV SLLEPLGL CTFI+DF YH+ HGEVH GTNV RKPF Sbjct: 603 HLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPF 662 Query: 656 SFKWWNMVP 664 SFKWWNMVP Sbjct: 663 SFKWWNMVP 671 >4N2M-A nrPDB Length = 690 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/667 (51%), Positives = 451/667 (67%), Gaps = 5/667 (0%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 M +R VR+ AV V G D+Y + P G + F + + V + + + E Sbjct: 22 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 81 Query: 61 ERADTR-RWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISL 119 + + RW + + V M+ S + + V ++Y+ +P+ A L+LT ++ISL Sbjct: 82 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 141 Query: 120 DCDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLED 179 D D + +G ++N K W WGP G G ILLVNCDR+ P +D D+ V+ +DL+D Sbjct: 142 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 201 Query: 180 MSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEV 239 MS M+LRT+GP L +++VL+ S D+ + VF++ P + Y H+LG+ K+ + V Sbjct: 202 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPF-FGQRYIHILGRRKLYHVV 260 Query: 240 PRLHGDEER-FFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIM 298 G E FFVEGL FPD GF+GL+S HV+LL+ +D +PIFTDTV+FR+APWIM Sbjct: 261 KYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIM 320 Query: 299 TPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQ 358 TP+ LPP+ V+VC +++N F+ V L K C+L +C Q NR DRWIQDE+ GY++ Sbjct: 321 TPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIAFGYIE 380 Query: 359 APHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVA 418 APHK PVV DSPR+G L+DFP K +LGPDFGYVTREP SV+ LDSFGNLEVSPPV Sbjct: 381 APHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTV 440 Query: 419 NGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFV 478 NGK YPLGRILIG + P S GRR+T+VVRDFL AQ+VQ PVEL+ DWL VGHVDEF+SFV Sbjct: 441 NGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFV 500 Query: 479 PAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLI 538 P P K F +L+AS AC+KLF+EKQK GHG A++F+G + K I+IN++LSN+ L+ Sbjct: 501 PIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKG-LGGMSSKRITINKILSNESLV 559 Query: 539 NYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKT-ERKKATAFFPDLVNMLVLGKHL 597 N + Q C+DWNR++LK+ELGL E DIID+P LFK E +A AFFP++VNM+VL K L Sbjct: 560 QENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDL 619 Query: 598 GIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSF 657 GIPKPFGP + CCLE VR LLEPLGL CTFIDD + YH GEVHCGTNV RKPF+F Sbjct: 620 GIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTF 679 Query: 658 KWWNMVP 664 KWW+MVP Sbjct: 680 KWWHMVP 686 >1KEH-A nrPDB Length = 689 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 7/140 (5%) Query: 158 DPSCDVQDNCDQHVHCLQDLEDMSVMVLRTQGPAALFDDHKLVLHTS-----SYDAKRAQ 212 DP +VQ +D S L + A LF + S D + Sbjct: 488 DPDPEVQAAARLLAAWDRDFTSDSRAALLFEEWARLFAGQNFAGQAAFATPWSLDKPVST 547 Query: 213 VFHICGPEDVCEAYRHVLGQDKVSY-EVPRLHGDEERFFVEGLSFPDA-GFTGLISFHVT 270 + + P+ + R + K Y + R GD R + ++ P A G+ L SF V Sbjct: 548 PYGVRDPKAAVDQLRTAIANTKRKYGAIDRPFGDASRMILNDVNVPGAAGYGNLGSFRVF 607 Query: 271 LLDDSNEDFSASPIFTDTVV 290 D +E+ +P+ +T V Sbjct: 608 TWSDPDENGIRTPVHGETWV 627 >2AE5-B nrPDB Length = 528 Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%) Query: 205 SYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSY-EVPRLHGDEERFFVEGLSFPDA-GFT 262 S D + + + P+ + R + K Y + R GD R + ++ P A G+ Sbjct: 371 SLDKPVSTPYGVRDPKAAVDQLRTAIANTKRKYGAIDRPFGDASRMILNDVNVPGAAGYG 430 Query: 263 GLISFHVTLLDDSNEDFSASPIFTDTVV 290 L SF V D +E+ +P+ +T V Sbjct: 431 NLGSFRVFTWSDPDENGVRTPVHGETWV 458 >4HPF-A nrPDB Length = 722 Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 12/80 (15%) Query: 580 ATAFFP----DLVNMLVLG-------KHLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHC 628 ATAF+ +L+ MLV G +HL K +G + L + R L L LH Sbjct: 562 ATAFYNYHVLELLQMLVTGGVSSQLEQHLDKDKVYGVADSCTSLLSGRNRCKLGLLSLHE 621 Query: 629 TFIDDFTPYHMLHGEVHCGT 648 T + D P + G++ CG+ Sbjct: 622 TILSDVNPRNTF-GQLFCGS 640 >1OMX-A nrPDB Length = 293 Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Query: 377 QDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANGKEYPLGRILIGGNLPG 436 Q FP + I G+V R+ S SG+ S+G E+ P NG +Y + +LIG + Sbjct: 132 QQFPDQII-----GFVPRKHVSTS-SGIYSYGGFELQTPGPGNGDQYSM--VLIGASFFN 183 Query: 437 SSGRRVTQVVRDFLHA 452 S + Q +HA Sbjct: 184 SKYLELFQKQPAAVHA 199 >2BG9-A nrPDB Length = 370 Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 13/79 (16%) Query: 130 DRNFVDKRQWV-----WGPSGYGGILLVNCDRDD---PSCDVQDNCD---QHVHCLQDLE 178 + N ++QW+ W P+ YGGI + DD P + +N D VH + L Sbjct: 51 ETNVRLRQQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADGDFAIVHMTKLLL 110 Query: 179 DMSVMVLRTQGPAALFDDH 197 D + ++ T P A+F + Sbjct: 111 DYTGKIMWT--PPAIFKSY 127 >4H3S-A nrPDB Length = 817 Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 3/102 (2%) Query: 3 LQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGRER 62 L R+ V +++ + VC E + G +GT E Y D I N++ R+ Sbjct: 330 LYRLAEVLIKNGKAYVCHCTAEEIKRGRGIKEDGTPGGERYACKHRDQSIEQNLQEFRDM 389 Query: 63 ADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLP 104 D + +A L + +NSPS + D I+Y + P P Sbjct: 390 RDGKYKPGEAILRMKQDLNSPSPQMWD---LIAYRVLNAPHP 428 >4AQ5-A nrPDB Length = 461 Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 13/73 (17%) Query: 136 KRQWV-----WGPSGYGGILLVNCDRDD---PSCDVQDNCD---QHVHCLQDLEDMSVMV 184 ++QW+ W P+ YGGI + DD P + +N D VH + L D + + Sbjct: 81 RQQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADGDFAIVHMTKLLLDYTGKI 140 Query: 185 LRTQGPAALFDDH 197 + T P A+F + Sbjct: 141 MWT--PPAIFKSY 151 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6CE1-A nrPDB 1198 0.0 5HP5-A nrPDB 1144 0.0 4N2M-A nrPDB 1133 0.0 2DEY-X nrPDB 1108 0.0 Sequences not found previously or not previously below threshold: 6CET-M nrPDB 31 1.4 3UX1-A nrPDB 30 4.9 3RAA-A nrPDB 29 5.2 3J1S-A nrPDB 29 5.2 5IPK-A nrPDB 29 5.9 3OAH-A nrPDB 29 6.2 3KIC-A nrPDB 29 6.2 3J4P-A nrPDB 29 6.6 3J1Q-A nrPDB 29 7.0 3NG9-A nrPDB 29 7.1 CONVERGED! >6CE1-A nrPDB Length = 686 Score = 1198 bits (3099), Expect = 0.0, Method: Composition-based stats. Identities = 664/664 (100%), Positives = 664/664 (100%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR Sbjct: 23 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 82 Query: 61 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD Sbjct: 83 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 142 Query: 121 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM 180 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM Sbjct: 143 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM 202 Query: 181 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP 240 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP Sbjct: 203 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP 262 Query: 241 RLHGDEERFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMTP 300 RLHGDEERFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMTP Sbjct: 263 RLHGDEERFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMTP 322 Query: 301 STLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQAP 360 STLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQAP Sbjct: 323 STLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQAP 382 Query: 361 HKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANG 420 HKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANG Sbjct: 383 HKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANG 442 Query: 421 KEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPA 480 KEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPA Sbjct: 443 KEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFVPA 502 Query: 481 PDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLINY 540 PDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLINY Sbjct: 503 PDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLINY 562 Query: 541 NKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGKHLGIP 600 NKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGKHLGIP Sbjct: 563 NKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGKHLGIP 622 Query: 601 KPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSFKWW 660 KPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSFKWW Sbjct: 623 KPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSFKWW 682 Query: 661 NMVP 664 NMVP Sbjct: 683 NMVP 686 >5HP5-A nrPDB Length = 684 Score = 1144 bits (2959), Expect = 0.0, Method: Composition-based stats. Identities = 385/669 (57%), Positives = 473/669 (70%), Gaps = 11/669 (1%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 M+ +R+V++SL+ PT AVCV GVE VDI+ VP+G F V G+ GV++++ N R + Sbjct: 22 MAPKRVVQLSLKMPTHAVCVVGVEAHVDIHSDVPKGANSFRVSGSSGVEVFMVYNRTRVK 81 Query: 61 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120 E RW D +++V + + S +L D V++SY E L +VLYLT VDISL+ Sbjct: 82 EPIGKARWPLDTDADMVVSVGTASKELKDFKVRVSYFGEQEDQALGRSVLYLTGVDISLE 141 Query: 121 CDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLEDM 180 D G+ R+ DK+ W WGP GYG ILLVNCDRD+ D + L DL+DM Sbjct: 142 VDTGRTGKVKRSQGDKKTWRWGPEGYGAILLVNCDRDNHRSAEPDLTHSWLMSLADLQDM 201 Query: 181 SVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEVP 240 S M+L GP LFD HKLVL+ D+KR +VF G + + Y+ VLG +SYEV Sbjct: 202 SPMLLSCNGPDKLFDSHKLVLNVPFSDSKRVRVFCARGGNSLSD-YKQVLGPQCLSYEVE 260 Query: 241 RLHGDEE-RFFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMT 299 R G++E +F+VEGL+FPDA F GL+S V+L+D +FTDTV FR+APWIMT Sbjct: 261 RQPGEQEIKFYVEGLTFPDADFLGLVSLSVSLVDPGT--LPEVTLFTDTVGFRMAPWIMT 318 Query: 300 PSTLPPLEVYVCRVRN----NTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELG 355 P+T PP E+YVCRV + N F++ ++ L KA CKLTICPQ ENRNDRWIQDEME G Sbjct: 319 PNTQPPEELYVCRVMDTHGSNEKFLEDMSYLTLKANCKLTICPQVENRNDRWIQDEMEFG 378 Query: 356 YVQAPHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPP 415 Y++APHK+ PVVFDSPRN L+DFPYKRILGPDFGYVTRE S LDSFGNL+VSPP Sbjct: 379 YIEAPHKSFPVVFDSPRNRGLKDFPYKRILGPDFGYVTREIPLPGPSSLDSFGNLDVSPP 438 Query: 416 VVANGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFL 475 V G EYPLGRILIG + P S GR++ + VR+FL AQ+VQ PVEL+ DWL+VGHVDEFL Sbjct: 439 VTVGGTEYPLGRILIGSSFPKSGGRQMARAVRNFLKAQQVQAPVELYSDWLSVGHVDEFL 498 Query: 476 SFVPAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNK 535 +FVP D KGFR+LLASP AC KLFQEK++ G+G A F G+ Q K SIN++L+++ Sbjct: 499 TFVPTSDQKGFRLLLASPSACLKLFQEKKEEGYGEAAQFDGL--KHQAKR-SINEMLADR 555 Query: 536 DLINYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKTERKKATAFFPDLVNMLVLGK 595 L N Q CIDWNR VLKRELGLAE DI+DIPQLF + A AFFPD+VNM+VLGK Sbjct: 556 HLQRDNLHAQKCIDWNRNVLKRELGLAESDIVDIPQLFFLKNFYAEAFFPDMVNMVVLGK 615 Query: 596 HLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPF 655 +LGIPKP+GPIING CCLEEKV+SLLEPLGLHC FIDD+ YH L GE+HCGTNV RKPF Sbjct: 616 YLGIPKPYGPIINGRCCLEEKVQSLLEPLGLHCIFIDDYLSYHELQGEIHCGTNVRRKPF 675 Query: 656 SFKWWNMVP 664 FKWWNMVP Sbjct: 676 PFKWWNMVP 684 >4N2M-A nrPDB Length = 690 Score = 1133 bits (2930), Expect = 0.0, Method: Composition-based stats. Identities = 344/667 (51%), Positives = 451/667 (67%), Gaps = 5/667 (0%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 M +R VR+ AV V G D+Y + P G + F + + V + + + E Sbjct: 22 MLRERTVRLQYGSRVEAVYVLGTYLWTDVYSAAPAGAQTFSLKHSEHVWVEVVRDGEAEE 81 Query: 61 ERADTR-RWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISL 119 + + RW + + V M+ S + + V ++Y+ +P+ A L+LT ++ISL Sbjct: 82 VATNGKQRWLLSPSTTLRVTMSQASTEASSDKVTVNYYDEEGSIPIDQAGLFLTAIEISL 141 Query: 120 DCDLNCEGRQDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLED 179 D D + +G ++N K W WGP G G ILLVNCDR+ P +D D+ V+ +DL+D Sbjct: 142 DVDADRDGVVEKNNPKKASWTWGPEGQGAILLVNCDRETPWLPKEDCRDEKVYSKEDLKD 201 Query: 180 MSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYEV 239 MS M+LRT+GP L +++VL+ S D+ + VF++ P + Y H+LG+ K+ + V Sbjct: 202 MSQMILRTKGPDRLPAGYEIVLYISMSDSDKVGVFYVENPF-FGQRYIHILGRRKLYHVV 260 Query: 240 PRLHGDEER-FFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIM 298 G E FFVEGL FPD GF+GL+S HV+LL+ +D +PIFTDTV+FR+APWIM Sbjct: 261 KYTGGSAELLFFVEGLCFPDEGFSGLVSIHVSLLEYMAQDIPLTPIFTDTVIFRIAPWIM 320 Query: 299 TPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYVQ 358 TP+ LPP+ V+VC +++N F+ V L K C+L +C Q NR DRWIQDE+ GY++ Sbjct: 321 TPNILPPVSVFVCCMKDNYLFLKEVKNLVEKTNCELKVCFQYLNRGDRWIQDEIAFGYIE 380 Query: 359 APHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVA 418 APHK PVV DSPR+G L+DFP K +LGPDFGYVTREP SV+ LDSFGNLEVSPPV Sbjct: 381 APHKGFPVVLDSPRDGNLKDFPVKELLGPDFGYVTREPLFESVTSLDSFGNLEVSPPVTV 440 Query: 419 NGKEYPLGRILIGGNLPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLSFV 478 NGK YPLGRILIG + P S GRR+T+VVRDFL AQ+VQ PVEL+ DWL VGHVDEF+SFV Sbjct: 441 NGKTYPLGRILIGSSFPLSGGRRMTKVVRDFLKAQQVQAPVELYSDWLTVGHVDEFMSFV 500 Query: 479 PAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKDLI 538 P P K F +L+AS AC+KLF+EKQK GHG A++F+G+ K I+IN++LSN+ L+ Sbjct: 501 PIPGTKKFLLLMASTSACYKLFREKQKDGHGEAIMFKGL-GGMSSKRITINKILSNESLV 559 Query: 539 NYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKT-ERKKATAFFPDLVNMLVLGKHL 597 N + Q C+DWNR++LK+ELGL E DIID+P LFK E +A AFFP++VNM+VL K L Sbjct: 560 QENLYFQRCLDWNRDILKKELGLTEQDIIDLPALFKMDEDHRARAFFPNMVNMIVLDKDL 619 Query: 598 GIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPFSF 657 GIPKPFGP + CCLE VR LLEPLGL CTFIDD + YH GEVHCGTNV RKPF+F Sbjct: 620 GIPKPFGPQVEEECCLEMHVRGLLEPLGLECTFIDDISAYHKFLGEVHCGTNVRRKPFTF 679 Query: 658 KWWNMVP 664 KWW+MVP Sbjct: 680 KWWHMVP 686 >2DEY-X nrPDB Length = 671 Score = 1108 bits (2867), Expect = 0.0, Method: Composition-based stats. Identities = 373/669 (55%), Positives = 462/669 (69%), Gaps = 11/669 (1%) Query: 1 MSLQRIVRVSLEHPTSAVCVAGVETLVDIYGSVPEGTEMFEVYGTPGVDIYISPNMERGR 60 M+ ++RV+ E PT AVCV G T +DI S PE F + +PGV + I+ + + Sbjct: 9 MAQGTLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSPPAKK 68 Query: 61 ERADTRRWRFDATLEIIVVMNSPSNDLNDSHVQISYHSSHEPLPLAYAVLYLTCVDISLD 120 + + W D +E+ + M + S D VQISY+ P P+ A+LYLT V+ISL Sbjct: 69 KSTGSSTWPLDPGVEVTLTMKAASGSTGDQKVQISYYGPKTP-PVK-ALLYLTAVEISLC 126 Query: 121 CDLNCEGR--QDRNFVDKRQWVWGPSGYGGILLVNCDRDDPSCDVQDNCDQHVHCLQDLE 178 D+ G+ R D+R W WGP G G ILLVNCDRD+ D D V +DL+ Sbjct: 127 ADITRTGKVKPTRAVKDQRTWTWGPCGQGAILLVNCDRDNLESSAMDCEDDEVLDSEDLQ 186 Query: 179 DMSVMVLRTQGPAALFDDHKLVLHTSSYDAKRAQVFHICGPEDVCEAYRHVLGQDKVSYE 238 DMS+M L T+ P F +H LVLH + + + +VF + + VLG S+ Sbjct: 187 DMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRGK-LSSKCSVVLGPKWPSHY 245 Query: 239 VPRLHGDEER-FFVEGLSFPDAGFTGLISFHVTLLDDSNEDFSASPIFTDTVVFRVAPWI 297 + G F+VE L+FPD F GLI+ ++LLD SN + + +F D+VVFRVAPWI Sbjct: 246 LMVPGGKHNMDFYVEALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWI 305 Query: 298 MTPSTLPPLEVYVCRVRNNTCFVDAVAELARKAGCKLTICPQAENRNDRWIQDEMELGYV 357 MTP+T PP EVY C + N F+ +V LA KA CKLTICP+ EN +D+W+QDEME+GY+ Sbjct: 306 MTPNTQPPQEVYACSIFENEDFLKSVTTLAMKAKCKLTICPEEENMDDQWMQDEMEIGYI 365 Query: 358 QAPHKTLPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVV 417 QAPHKTLPVVFDSPRN L++FP KR++GPDFGYVTR P+ +SGLDSFGNLEVSPPV Sbjct: 366 QAPHKTLPVVFDSPRNRGLKEFPIKRVMGPDFGYVTRGPQTGGISGLDSFGNLEVSPPVT 425 Query: 418 ANGKEYPLGRILIGGN-LPGSSGRRVTQVVRDFLHAQKVQPPVELFVDWLAVGHVDEFLS 476 GKEYPLGRIL G + P + R++ Q ++DFL AQ+VQ PV+L+ DWL+VGHVDEFLS Sbjct: 426 VRGKEYPLGRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLS 485 Query: 477 FVPAPDGKGFRMLLASPGACFKLFQEKQKCGHGRALLFQGVVDDEQVKTISINQVLSNKD 536 FVPAPD KGFR+LLASP +C+KLFQE+Q GHG ALLF+G+ +Q K +I LSNK Sbjct: 486 FVPAPDRKGFRLLLASPRSCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNI---LSNKT 542 Query: 537 LINYNKFVQSCIDWNREVLKRELGLAECDIIDIPQLFKT-ERKKATAFFPDLVNMLVLGK 595 L +N FV+ CIDWNRE+LKRELGLAE DIIDIPQLFK E KA AFFP++VNMLVLGK Sbjct: 543 LREHNSFVERCIDWNRELLKRELGLAESDIIDIPQLFKLKEFSKAEAFFPNMVNMLVLGK 602 Query: 596 HLGIPKPFGPIINGCCCLEEKVRSLLEPLGLHCTFIDDFTPYHMLHGEVHCGTNVCRKPF 655 HLGIPKPFGP+ING CCLEEKV SLLEPLGL CTFI+DF YH+ HGEVH GTNV RKPF Sbjct: 603 HLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFTYHIRHGEVHAGTNVRRKPF 662 Query: 656 SFKWWNMVP 664 SFKWWNMVP Sbjct: 663 SFKWWNMVP 671 >6CET-M nrPDB Length = 569 Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 6/61 (9%) Query: 256 FPDAGFTGLI---SFHVTLLDDSNEDFSASPIFTDTVVFRVAPWIMTPSTLPPLEVYVCR 312 FP ++ S V+L + N +P +T + ++ W++ L L YVC Sbjct: 356 FPSHDLPSVLAKFSLPVSLSEFRN---PLAPAVQETQLIQMVVWMLQRRLLIQLHTYVCL 412 Query: 313 V 313 + Sbjct: 413 M 413 >3UX1-A nrPDB Length = 518 Score = 29.6 bits (65), Expect = 4.9, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSP 414 LP V S G L FP + P +GY+T ++V G SF LE P Sbjct: 134 LPYVLGSAHEGCLPPFPADVFMIPQYGYLTLNDGSQAV-GRSSFYCLEYFP 183 >3RAA-A nrPDB Length = 519 Score = 29.2 bits (64), Expect = 5.2, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANGK-- 421 LP V S G L FP + P +GY+T ++V G SF LE P + Sbjct: 134 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFPSQMLRTGNN 192 Query: 422 ---EYPLGRILIGGNLPGSSG--RRVTQVVRDFL 450 Y + + S R + ++ +L Sbjct: 193 FQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYL 226 >3J1S-A nrPDB Length = 519 Score = 29.2 bits (64), Expect = 5.2, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSP 414 LP V S G L FP + P +GY+T ++V G SF LE P Sbjct: 134 LPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNNGSQAV-GRSSFYCLEYFP 183 >5IPK-A nrPDB Length = 735 Score = 29.2 bits (64), Expect = 5.9, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSP 414 LP V S G L FP + P +GY+T ++V G SF LE P Sbjct: 350 LPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNNGSQAV-GRSSFYCLEYFP 399 >3OAH-A nrPDB Length = 534 Score = 29.2 bits (64), Expect = 6.2, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSP 414 LP V S G L FP + P +GY+T ++V G SF LE P Sbjct: 149 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFP 198 >3KIC-A nrPDB Length = 736 Score = 29.2 bits (64), Expect = 6.2, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSP 414 LP V S G L FP + P +GY+T ++V G SF LE P Sbjct: 350 LPYVLGSAHQGCLPPFPADVFMVPQYGYLTLNNGSQAV-GRSSFYCLEYFP 399 >3J4P-A nrPDB Length = 517 Score = 29.2 bits (64), Expect = 6.6, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 8/94 (8%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSPPVVANGK-- 421 LP V S G L FP + P +GY+T ++V G SF LE P + Sbjct: 132 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFPSQMLRTGNN 190 Query: 422 ---EYPLGRILIGGNLPGSSG--RRVTQVVRDFL 450 Y + + S R + ++ +L Sbjct: 191 FQFTYTFEDVPFHSSYAHSQSLDRLMNPLIDQYL 224 >3J1Q-A nrPDB Length = 737 Score = 28.8 bits (63), Expect = 7.0, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSP 414 LP V S G L FP + P +GY+T ++V G SF LE P Sbjct: 352 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFP 401 >3NG9-A nrPDB Length = 736 Score = 28.8 bits (63), Expect = 7.1, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 364 LPVVFDSPRNGELQDFPYKRILGPDFGYVTREPRDRSVSGLDSFGNLEVSP 414 LP V S G L FP + P +GY+T ++V G SF LE P Sbjct: 351 LPYVLGSAHQGCLPPFPADVFMIPQYGYLTLNNGSQAV-GRSSFYCLEYFP 400 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.137 0.408 Lambda K H 0.267 0.0421 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,417,055 Number of Sequences: 36641 Number of extensions: 1196218 Number of successful extensions: 2414 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 2373 Number of HSP's gapped (non-prelim): 37 length of query: 664 length of database: 10,336,785 effective HSP length: 103 effective length of query: 561 effective length of database: 6,562,762 effective search space: 3681709482 effective search space used: 3681709482 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (28.8 bits)