BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9ULW0 (747 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6BJC-T nrPDB 1515 0.0 1GZ7-A nrPDB 36 0.079 1OC2-A nrPDB 32 1.1 5KF0-A nrPDB 32 1.1 4UBF-A nrPDB 31 1.9 5Z57-V nrPDB 31 2.2 5JRY-A nrPDB 31 2.4 1Q2Z-A nrPDB 29 6.1 >6BJC-T nrPDB Length = 747 Score = 1515 bits (3922), Expect = 0.0, Method: Compositional matrix adjust. Identities = 747/747 (100%), Positives = 747/747 (100%) Query: 1 MSQVKSSYSYDAPSDFINFSSLDDEGDTQNIDSWFEEKANLENKLLGKNGTGGLFQGKTP 60 MSQVKSSYSYDAPSDFINFSSLDDEGDTQNIDSWFEEKANLENKLLGKNGTGGLFQGKTP Sbjct: 1 MSQVKSSYSYDAPSDFINFSSLDDEGDTQNIDSWFEEKANLENKLLGKNGTGGLFQGKTP 60 Query: 61 LRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISRKTPAQPQRR 120 LRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISRKTPAQPQRR Sbjct: 61 LRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISRKTPAQPQRR 120 Query: 121 SLRLSAQKDLEQKEKHHVKMKAKRCATPVIIDEILPSKKMKVSNNKKKPEEEGSAHQDTA 180 SLRLSAQKDLEQKEKHHVKMKAKRCATPVIIDEILPSKKMKVSNNKKKPEEEGSAHQDTA Sbjct: 121 SLRLSAQKDLEQKEKHHVKMKAKRCATPVIIDEILPSKKMKVSNNKKKPEEEGSAHQDTA 180 Query: 181 EKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQELEKSMKMQQEVVEMRKKNEEFKKLAL 240 EKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQELEKSMKMQQEVVEMRKKNEEFKKLAL Sbjct: 181 EKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQELEKSMKMQQEVVEMRKKNEEFKKLAL 240 Query: 241 AGIGQPVKKSVSQVTKSVDFHFRTDERIKQHPKNQEEYKEVNFTSELRKHPSSPARVTKG 300 AGIGQPVKKSVSQVTKSVDFHFRTDERIKQHPKNQEEYKEVNFTSELRKHPSSPARVTKG Sbjct: 241 AGIGQPVKKSVSQVTKSVDFHFRTDERIKQHPKNQEEYKEVNFTSELRKHPSSPARVTKG 300 Query: 301 CTIVKPFNLSQGKKRTFDETVSTYVPLAQQVEDFHKRTPNRYHLRSKKDDINLLPSKSSV 360 CTIVKPFNLSQGKKRTFDETVSTYVPLAQQVEDFHKRTPNRYHLRSKKDDINLLPSKSSV Sbjct: 301 CTIVKPFNLSQGKKRTFDETVSTYVPLAQQVEDFHKRTPNRYHLRSKKDDINLLPSKSSV 360 Query: 361 TKICRDPQTPVLQTKHRARAVTCKSTAELEAEELEKLQQYKFKARELDPRILEGGPILPK 420 TKICRDPQTPVLQTKHRARAVTCKSTAELEAEELEKLQQYKFKARELDPRILEGGPILPK Sbjct: 361 TKICRDPQTPVLQTKHRARAVTCKSTAELEAEELEKLQQYKFKARELDPRILEGGPILPK 420 Query: 421 KPPVKPPTEPIGFDLEIEKRIQERESKKKTEDEHFEFHSRPCPTKILEDVVGVPEKKVLP 480 KPPVKPPTEPIGFDLEIEKRIQERESKKKTEDEHFEFHSRPCPTKILEDVVGVPEKKVLP Sbjct: 421 KPPVKPPTEPIGFDLEIEKRIQERESKKKTEDEHFEFHSRPCPTKILEDVVGVPEKKVLP 480 Query: 481 ITVPKSPAFALKNRIRMPTKEDEEEDEPVVIKAQPVPHYGVPFKPQIPEARTVEICPFSF 540 ITVPKSPAFALKNRIRMPTKEDEEEDEPVVIKAQPVPHYGVPFKPQIPEARTVEICPFSF Sbjct: 481 ITVPKSPAFALKNRIRMPTKEDEEEDEPVVIKAQPVPHYGVPFKPQIPEARTVEICPFSF 540 Query: 541 DSRDKERQLQKEKKIKELQKGEVPKFKALPLPHFDTINLPEKKVKNVTQIEPFCLETDRR 600 DSRDKERQLQKEKKIKELQKGEVPKFKALPLPHFDTINLPEKKVKNVTQIEPFCLETDRR Sbjct: 541 DSRDKERQLQKEKKIKELQKGEVPKFKALPLPHFDTINLPEKKVKNVTQIEPFCLETDRR 600 Query: 601 GALKAQTWKHQLEEELRQQKEAACFKARPNTVISQEPFVPKKEKKSVAEGLSGSLVQEPF 660 GALKAQTWKHQLEEELRQQKEAACFKARPNTVISQEPFVPKKEKKSVAEGLSGSLVQEPF Sbjct: 601 GALKAQTWKHQLEEELRQQKEAACFKARPNTVISQEPFVPKKEKKSVAEGLSGSLVQEPF 660 Query: 661 QLATEKRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELARLRRELVHKANPIRK 720 QLATEKRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELARLRRELVHKANPIRK Sbjct: 661 QLATEKRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELARLRRELVHKANPIRK 720 Query: 721 YQGLEIKSSDQPLTVPVSPKFSTRFHC 747 YQGLEIKSSDQPLTVPVSPKFSTRFHC Sbjct: 721 YQGLEIKSSDQPLTVPVSPKFSTRFHC 747 >1GZ7-A nrPDB Length = 534 Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 40/115 (34%), Gaps = 21/115 (18%) Query: 55 FQGKTPLRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISRK-- 112 + GK R A +Q + P PVD TY E + Q + S C S + A R Sbjct: 228 YNGKPLFRAAIMQSGCMVPSDPVDGTYGTE-----IYNQVVASAGCGSASDKLACLRGLS 282 Query: 113 ----------TPAQPQRRSLRLSA----QKDLEQKEKHHVKMKAKRCATPVIIDE 153 TP SLRLS + + + K PVII + Sbjct: 283 QDTLYQATSDTPGVLAYPSLRLSYLPRPDGTFITDDMYALVRDGKYAHVPVIIGD 337 >1OC2-A nrPDB Length = 348 Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 283 FTSELRKHPSSPARVTKGCT--IVKPFNLSQGKKRTFDETVSTYVPLAQQVEDF 334 FT+E +PSSP TK + IVK + S G K T + Y P Q +E F Sbjct: 149 FTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPY-QHIEKF 201 >5KF0-A nrPDB Length = 485 Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Query: 225 VVEMRKKNEEFKKLALAGIGQPVKKSVSQVTKSVD-FHFRTDE--RIKQHPKNQE-EYKE 280 V R++ +E + G+P+ S +VT+ +D F ++E RI N E + Sbjct: 81 VARFRERFDELAEALCIEAGKPINDSRGEVTRLIDTFRVASEEAVRIDGEVLNLEISARA 140 Query: 281 VNFTSELRKHPSSPARVTKGCTIVKPFNL 309 +T R+ P P C+ + PFN Sbjct: 141 QGYTGYTRRVPIGP------CSFISPFNF 163 >4UBF-A nrPDB Length = 387 Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 6/133 (4%) Query: 336 KRTPNRYHLRSKKDDINLLPSKSSVTKICRDPQTPVLQTKHRARAVTCKSTAELEAEELE 395 KR N+ L K+ D+ +PSK + + +P+ V TK+ C A E E Sbjct: 59 KRPLNKQELAKKEIDVISIPSKCLL--LVHEPKLKVDLTKYLENQAFCFDFAFDETASNE 116 Query: 396 KLQQYKFKARELDPRILEGG--PILPKKPPVKPPTEPIGFDLEIEKRIQERESKKKTEDE 453 + Y+F AR L I EGG T +G DL + + + + Sbjct: 117 VV--YRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRD 174 Query: 454 HFEFHSRPCPTKI 466 F ++PC K+ Sbjct: 175 VFLLKNQPCYRKL 187 >5Z57-V nrPDB Length = 908 Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 523 FKPQIPEARTVEICPFSFDSRDKERQLQK-----EKKIKELQKGEVPKFKALPLPHFDTI 577 K + PE++T E+C D ++R +K + L+K + F+ + +DTI Sbjct: 477 LKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTI 536 Query: 578 N-LPEKKVKNVTQIEPFCLETD 598 + L K++NV ++ L TD Sbjct: 537 HRLETNKLRNVAKMFAHLLYTD 558 >5JRY-A nrPDB Length = 485 Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 10/93 (10%) Query: 221 MQQEVVEMRKKNEEFKKLALAGIGQPVKKSVSQVTKSVD-FHFRTDE--RIKQHPKNQE- 276 + V R++ +E + G+P+ + +VT+ +D F ++E RI N E Sbjct: 77 LDHCVARFRERFDELAEALCIEAGKPINDAKGEVTRLIDTFRVASEEAVRIDGEVLNLEI 136 Query: 277 EYKEVNFTSELRKHPSSPARVTKGCTIVKPFNL 309 + +T R+ P P C+ + PFN Sbjct: 137 SARAQGYTGYTRRVPIGP------CSFISPFNF 163 >1Q2Z-A nrPDB Length = 120 Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust. Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Query: 156 PSKKMKVSNNKKKPEEEGSAHQ--DTAEKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQ 213 P++ +V +KK E +++Q + E+ + E ++ C+ +++ +K +EEQ Sbjct: 5 PAENFRVLVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQ 64 Query: 214 ELEKSMKMQQEVVEMRKKNEEFKKLALAGIGQPVKKSVS 252 +K QE VE+++ N ++ + GI K+ S Sbjct: 65 RFNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEAS 103 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6BJC-T nrPDB 1335 0.0 Sequences not found previously or not previously below threshold: 5FF7-A nrPDB 37 0.021 3RJL-A nrPDB 35 0.097 5CTQ-A nrPDB 35 0.16 5CTR-A nrPDB 34 0.20 5NZS-P nrPDB 34 0.23 1OC2-A nrPDB 34 0.26 4UBF-A nrPDB 33 0.40 5N5S-A nrPDB 33 0.45 5XJA-A nrPDB 33 0.50 3EDL-D nrPDB 33 0.50 1RW2-A nrPDB 33 0.57 5KF0-A nrPDB 32 0.82 5HXA-A nrPDB 32 0.88 1Q2Z-A nrPDB 32 1.00 1GZ7-A nrPDB 32 1.2 3EF1-A nrPDB 32 1.2 5JRY-A nrPDB 31 1.7 2I1J-A nrPDB 30 3.3 6ED3-A nrPDB 30 3.4 5Z57-V nrPDB 30 4.3 6ID1-U nrPDB 30 4.6 5T4Q-I nrPDB 29 7.8 6C0F-8 nrPDB 29 9.7 CONVERGED! >6BJC-T nrPDB Length = 747 Score = 1335 bits (3455), Expect = 0.0, Method: Composition-based stats. Identities = 747/747 (100%), Positives = 747/747 (100%) Query: 1 MSQVKSSYSYDAPSDFINFSSLDDEGDTQNIDSWFEEKANLENKLLGKNGTGGLFQGKTP 60 MSQVKSSYSYDAPSDFINFSSLDDEGDTQNIDSWFEEKANLENKLLGKNGTGGLFQGKTP Sbjct: 1 MSQVKSSYSYDAPSDFINFSSLDDEGDTQNIDSWFEEKANLENKLLGKNGTGGLFQGKTP 60 Query: 61 LRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISRKTPAQPQRR 120 LRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISRKTPAQPQRR Sbjct: 61 LRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISRKTPAQPQRR 120 Query: 121 SLRLSAQKDLEQKEKHHVKMKAKRCATPVIIDEILPSKKMKVSNNKKKPEEEGSAHQDTA 180 SLRLSAQKDLEQKEKHHVKMKAKRCATPVIIDEILPSKKMKVSNNKKKPEEEGSAHQDTA Sbjct: 121 SLRLSAQKDLEQKEKHHVKMKAKRCATPVIIDEILPSKKMKVSNNKKKPEEEGSAHQDTA 180 Query: 181 EKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQELEKSMKMQQEVVEMRKKNEEFKKLAL 240 EKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQELEKSMKMQQEVVEMRKKNEEFKKLAL Sbjct: 181 EKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQELEKSMKMQQEVVEMRKKNEEFKKLAL 240 Query: 241 AGIGQPVKKSVSQVTKSVDFHFRTDERIKQHPKNQEEYKEVNFTSELRKHPSSPARVTKG 300 AGIGQPVKKSVSQVTKSVDFHFRTDERIKQHPKNQEEYKEVNFTSELRKHPSSPARVTKG Sbjct: 241 AGIGQPVKKSVSQVTKSVDFHFRTDERIKQHPKNQEEYKEVNFTSELRKHPSSPARVTKG 300 Query: 301 CTIVKPFNLSQGKKRTFDETVSTYVPLAQQVEDFHKRTPNRYHLRSKKDDINLLPSKSSV 360 CTIVKPFNLSQGKKRTFDETVSTYVPLAQQVEDFHKRTPNRYHLRSKKDDINLLPSKSSV Sbjct: 301 CTIVKPFNLSQGKKRTFDETVSTYVPLAQQVEDFHKRTPNRYHLRSKKDDINLLPSKSSV 360 Query: 361 TKICRDPQTPVLQTKHRARAVTCKSTAELEAEELEKLQQYKFKARELDPRILEGGPILPK 420 TKICRDPQTPVLQTKHRARAVTCKSTAELEAEELEKLQQYKFKARELDPRILEGGPILPK Sbjct: 361 TKICRDPQTPVLQTKHRARAVTCKSTAELEAEELEKLQQYKFKARELDPRILEGGPILPK 420 Query: 421 KPPVKPPTEPIGFDLEIEKRIQERESKKKTEDEHFEFHSRPCPTKILEDVVGVPEKKVLP 480 KPPVKPPTEPIGFDLEIEKRIQERESKKKTEDEHFEFHSRPCPTKILEDVVGVPEKKVLP Sbjct: 421 KPPVKPPTEPIGFDLEIEKRIQERESKKKTEDEHFEFHSRPCPTKILEDVVGVPEKKVLP 480 Query: 481 ITVPKSPAFALKNRIRMPTKEDEEEDEPVVIKAQPVPHYGVPFKPQIPEARTVEICPFSF 540 ITVPKSPAFALKNRIRMPTKEDEEEDEPVVIKAQPVPHYGVPFKPQIPEARTVEICPFSF Sbjct: 481 ITVPKSPAFALKNRIRMPTKEDEEEDEPVVIKAQPVPHYGVPFKPQIPEARTVEICPFSF 540 Query: 541 DSRDKERQLQKEKKIKELQKGEVPKFKALPLPHFDTINLPEKKVKNVTQIEPFCLETDRR 600 DSRDKERQLQKEKKIKELQKGEVPKFKALPLPHFDTINLPEKKVKNVTQIEPFCLETDRR Sbjct: 541 DSRDKERQLQKEKKIKELQKGEVPKFKALPLPHFDTINLPEKKVKNVTQIEPFCLETDRR 600 Query: 601 GALKAQTWKHQLEEELRQQKEAACFKARPNTVISQEPFVPKKEKKSVAEGLSGSLVQEPF 660 GALKAQTWKHQLEEELRQQKEAACFKARPNTVISQEPFVPKKEKKSVAEGLSGSLVQEPF Sbjct: 601 GALKAQTWKHQLEEELRQQKEAACFKARPNTVISQEPFVPKKEKKSVAEGLSGSLVQEPF 660 Query: 661 QLATEKRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELARLRRELVHKANPIRK 720 QLATEKRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELARLRRELVHKANPIRK Sbjct: 661 QLATEKRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELARLRRELVHKANPIRK 720 Query: 721 YQGLEIKSSDQPLTVPVSPKFSTRFHC 747 YQGLEIKSSDQPLTVPVSPKFSTRFHC Sbjct: 721 YQGLEIKSSDQPLTVPVSPKFSTRFHC 747 >5FF7-A nrPDB Length = 327 Score = 37.4 bits (85), Expect = 0.021, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 33/190 (17%) Query: 576 TINLPEKKVKNVTQIEP----FCLETDRRGALKAQTWKHQLEEELRQQKEAACFKARPNT 631 TI L E K K++ ++ L D+RGALK +HQ +E +Q E + Sbjct: 2 TITLTENKRKSMEKLSVDGVISALAFDQRGALKRMMAQHQTKEPTVEQIEEL------KS 55 Query: 632 VISQE--PF-----------VPKKEKKSVAEGLSGSLVQEPFQLATEKRAKERQEL--EK 676 ++S+E PF +P +S GL + + + T R + ++ K Sbjct: 56 LVSEELTPFASSILLDPEYGLPASRVRSEEAGLLLAYEKTGYDATTTSRLPDCLDVWSAK 115 Query: 677 RMAEVEAQKAQQLEEARLQEE----EQKKEELARLRRELVHKANPIRKYQGLEIKSSDQP 732 R+ E A+ + L + + EQKK + R+ E +A I Y LEI + D+ Sbjct: 116 RIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSEC--RAEDIPFY--LEILTYDEK 171 Query: 733 LTVPVSPKFS 742 + SP+F+ Sbjct: 172 IADNASPEFA 181 >3RJL-A nrPDB Length = 538 Score = 35.5 bits (80), Expect = 0.097, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 38/173 (21%) Query: 148 PVIID-EILPSKKMKVSNNKKKPEEE----GSAHQDTAEKNASSPEKA--KGRHTVPCMP 200 P++ID E ++ VS N EE A QD AEK + KA R+T P Sbjct: 39 PLVIDGERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFETWRYTDP--- 95 Query: 201 PAKQKFLKSTEEQELEKSMKMQQEVVEMRKKNEEFKKLALAGIGQPVKKSVSQVTKSVDF 260 E++ + + V ++R+K EF L + G+P ++ + +++DF Sbjct: 96 --------------EERAAVLFRAVAKVRRKKHEFSALLVKEAGKPWNEADADTAEAIDF 141 Query: 261 H----FRTDERIKQHPKNQEEYKEVNFTSELRKHPSSPARVTKGCTIVKPFNL 309 + E K P N E E ++ +P VT ++ P+N Sbjct: 142 MEYYARQMIELAKGKPVNSRE-------GERNQYVYTPTGVT---VVIPPWNF 184 >5CTQ-A nrPDB Length = 561 Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 672 QELEKRMAEVEAQ--KAQQLEEARLQEEEQKKEELARLRRE 710 Q+ E R+A V Q KA + E A +Q+EE+K E+ R R E Sbjct: 517 QKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAE 557 >5CTR-A nrPDB Length = 338 Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 672 QELEKRMAEVEAQ--KAQQLEEARLQEEEQKKEELARLRRE 710 Q+ E R+A V Q KA + E A +Q+EE+K E+ R R E Sbjct: 294 QKTETRLARVNEQRMKAAEKEAALVQQEEEKAEQRKRARAE 334 >5NZS-P nrPDB Length = 520 Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 633 ISQEPFVPKKEKKSVAEGLSGSLVQEPFQLATEKRAKERQELEKRMAEVEAQKAQQLEEA 692 +S + F + + VAE L +E +K+A+E R+A E Q ++ EE Sbjct: 235 VSNQSFTEIERQAQVAEKL-----REQQAADAKKQAEESMVASMRLAYQELQIDRKKEEK 289 Query: 693 RLQEEEQKKEELA-RLRRELVHKAN 716 +LQ E KK E A RL LV +++ Sbjct: 290 KLQNLEGKKREQAERLGMGLVSRSS 314 >1OC2-A nrPDB Length = 348 Score = 33.9 bits (76), Expect = 0.26, Method: Composition-based stats. Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 8/84 (9%) Query: 261 HFRTDERIKQHPKNQE-----EYKEVNFTSELRKHPSSPARVTKGCT--IVKPFNLSQGK 313 H TDE P ++ E FT+E +PSSP TK + IVK + S G Sbjct: 122 HVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGV 181 Query: 314 KRTFDETVSTYVPLAQQVEDFHKR 337 K T + Y P Q +E F R Sbjct: 182 KATISNCSNNYGPY-QHIEKFIPR 204 >4UBF-A nrPDB Length = 387 Score = 33.2 bits (74), Expect = 0.40, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 336 KRTPNRYHLRSKKDDINLLPSKSSVTKICRDPQTPVLQTKHRARAVTCKSTAELEAEELE 395 KR N+ L K+ D+ +PSK + + +P+ V TK+ C A E E Sbjct: 59 KRPLNKQELAKKEIDVISIPSKCLL--LVHEPKLKVDLTKYLENQAFCFDFAFDETASNE 116 Query: 396 KLQQYKFKARELDPRILEGG 415 + Y+F AR L I EGG Sbjct: 117 VV--YRFTARPLVQTIFEGG 134 >5N5S-A nrPDB Length = 515 Score = 33.2 bits (74), Expect = 0.45, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 10/98 (10%) Query: 216 EKSMKMQQEVVEMRKKNEEFKKLALAGIGQPVKKSVSQVTKSVD-FHFRTDERIK---QH 271 E+ +++ V E++ + EE + G+P+K + +VT+++D F +E ++ +H Sbjct: 99 ERKAVLEKVVAELKNRFEEIAQTLTMESGKPIKDARGEVTRTIDTFQVAAEESVRIYGEH 158 Query: 272 PKNQEEYKEVNFTSELRKHPSSPARVTKGCTIVKPFNL 309 + ++K P P ++V P+N Sbjct: 159 IPLDISARNKGLQGIVKKFPIGPV------SMVSPWNF 190 >5XJA-A nrPDB Length = 426 Score = 32.8 bits (73), Expect = 0.50, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 336 KRTPNRYHLRSKKDDINLLPSKSSVTKICRDPQTPVLQTKHRARAVTCKSTAELEAEELE 395 KR N+ L K+ D+ +PSK + + +P+ V TK+ C A E E Sbjct: 95 KRPLNKQELAKKEIDVISVPSKCLL--LVHEPKLKVDLTKYLENQAFCFDFAFDETASNE 152 Query: 396 KLQQYKFKARELDPRILEGG 415 + Y+F AR L I EGG Sbjct: 153 VV--YRFTARPLVQTIFEGG 170 >3EDL-D nrPDB Length = 331 Score = 32.8 bits (73), Expect = 0.50, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Query: 336 KRTPNRYHLRSKKDDINLLPSKSSVTKICRDPQTPVLQTKHRARAVTCKSTAELEAEELE 395 KR N+ L K+ D+ +PSK + + +P+ V TK+ C A E E Sbjct: 7 KRPLNKQELAKKEIDVISVPSKCLL--LVHEPKLKVDLTKYLENQAFCFDFAFDETASNE 64 Query: 396 KLQQYKFKARELDPRILEGG 415 + Y+F AR L I EGG Sbjct: 65 VV--YRFTARPLVQTIFEGG 82 >1RW2-A nrPDB Length = 152 Score = 32.8 bits (73), Expect = 0.57, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Query: 151 IDEILPSKKMKVSNNKKKPEEEGSAHQ--DTAEKNASSPEKAKGRHTVPCMPPAKQKFLK 208 + + P++ +V +KK E +++Q + E+ + E ++ C+ +++ +K Sbjct: 31 VGSVNPAENFRVLVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIK 90 Query: 209 STEEQELEKSMKMQQEVVEMRKKNEEFKKLALAGIGQPVKKSVS 252 +EEQ +K QE VE+++ N ++ + GI K+ S Sbjct: 91 FSEEQRFNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEAS 134 >5KF0-A nrPDB Length = 485 Score = 32.4 bits (72), Expect = 0.82, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Query: 225 VVEMRKKNEEFKKLALAGIGQPVKKSVSQVTKSVD-FHFRTDE--RIKQHPKNQE-EYKE 280 V R++ +E + G+P+ S +VT+ +D F ++E RI N E + Sbjct: 81 VARFRERFDELAEALCIEAGKPINDSRGEVTRLIDTFRVASEEAVRIDGEVLNLEISARA 140 Query: 281 VNFTSELRKHPSSPARVTKGCTIVKPFNL 309 +T R+ P P C+ + PFN Sbjct: 141 QGYTGYTRRVPIGP------CSFISPFNF 163 >5HXA-A nrPDB Length = 483 Score = 32.0 bits (71), Expect = 0.88, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Query: 632 VISQEPFVPK----KEKKSVAEGLSGSLVQEPFQLATEKRAKERQELEKRMAEVEAQKAQ 687 V SQ+P P + AE L G+LV PF L+ A ER L +AE +A+ A Sbjct: 381 VASQDPADPGVLVLSQFAGAAEQLPGALVVNPFDLSQMAEALERA-LSMPLAERQARHAD 439 Query: 688 QLEEAR 693 + R Sbjct: 440 MMAPMR 445 >1Q2Z-A nrPDB Length = 120 Score = 32.0 bits (71), Expect = 1.00, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 2/99 (2%) Query: 156 PSKKMKVSNNKKKPEEEGSAHQ--DTAEKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQ 213 P++ +V +KK E +++Q + E+ + E ++ C+ +++ +K +EEQ Sbjct: 5 PAENFRVLVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQ 64 Query: 214 ELEKSMKMQQEVVEMRKKNEEFKKLALAGIGQPVKKSVS 252 +K QE VE+++ N ++ + GI K+ S Sbjct: 65 RFNNFLKALQEKVEIKQLNHFWEIVVQDGITLITKEEAS 103 >1GZ7-A nrPDB Length = 534 Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 31/83 (37%), Gaps = 17/83 (20%) Query: 55 FQGKTPLRKANLQQAIVTPLKPVDNTYYKEAEKENLVEQSIPSNACSSLEVEAAISR--- 111 + GK R A +Q + P PVD TY E + Q + S C S + A R Sbjct: 228 YNGKPLFRAAIMQSGCMVPSDPVDGTYGTE-----IYNQVVASAGCGSASDKLACLRGLS 282 Query: 112 ---------KTPAQPQRRSLRLS 125 TP SLRLS Sbjct: 283 QDTLYQATSDTPGVLAYPSLRLS 305 >3EF1-A nrPDB Length = 442 Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 12/145 (8%) Query: 170 EEEGSAHQDTAEKNASSPEKAKGRHTVPCMPPAKQKFLKSTEEQELEKSMKMQQEVVEMR 229 +E +++T E ++S+ A+ T+P K FL++ E LE+ K + +E++ Sbjct: 217 DEINEENEETPEYDSSNSSYAQDSSTIPEKTLLKDTFLQNRE--ALEEQNKERVTALELQ 274 Query: 230 KKNEEFKKLALAGIGQPVKKSVSQ-VTKSVDFHFRTDERIKQ--HPKNQEEYKEVNFTSE 286 K K A + K + S + + D E++ + H EE +++ S Sbjct: 275 KSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAVYYEEENDISSRSG 334 Query: 287 LRKH-------PSSPARVTKGCTIV 304 KH P +V KGC ++ Sbjct: 335 NHKHANVGLIIPKMKQKVLKGCRLL 359 >5JRY-A nrPDB Length = 485 Score = 31.3 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 10/89 (11%) Query: 225 VVEMRKKNEEFKKLALAGIGQPVKKSVSQVTKSVD-FHFRTDE--RIKQHPKNQE-EYKE 280 V R++ +E + G+P+ + +VT+ +D F ++E RI N E + Sbjct: 81 VARFRERFDELAEALCIEAGKPINDAKGEVTRLIDTFRVASEEAVRIDGEVLNLEISARA 140 Query: 281 VNFTSELRKHPSSPARVTKGCTIVKPFNL 309 +T R+ P P C+ + PFN Sbjct: 141 QGYTGYTRRVPIGP------CSFISPFNF 163 >2I1J-A nrPDB Length = 575 Score = 30.1 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%) Query: 581 EKKVKNVTQIEPFCLETDRRGALKAQTWKHQLEEELRQQKEAACFKARPNTVISQEPFVP 640 E+K+ Q E LE R +A+ + + ++ LRQ +E +++ N + +Q+ + Sbjct: 311 EEKLAKQAQREKLQLEIAARE--RAEKKQQEYQDRLRQMQEEM-ERSQANLLEAQDMILR 367 Query: 641 KKEKKSVAEGLSGSLVQEPFQL---------ATEKRAKERQELEK--RMAEVEAQKAQQL 689 +E+ + L Q +L A ERQ+LE R + E + QQ Sbjct: 368 LEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQE 427 Query: 690 EEARLQEEEQKKEELARLRRE 710 E + E + +EE+ RR+ Sbjct: 428 VELKDSETRRLQEEVEDARRK 448 >6ED3-A nrPDB Length = 848 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Query: 655 LVQEPFQLATEKRAKERQELEKRMAEVEAQ----KAQQLEEARL--QEEEQKKEELARLR 708 L + L E ++ R E++ R E++ + ++EE L +E+E E LA+LR Sbjct: 387 LPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAERLAKLR 446 Query: 709 REL 711 EL Sbjct: 447 SEL 449 >5Z57-V nrPDB Length = 908 Score = 29.7 bits (65), Expect = 4.3, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%) Query: 523 FKPQIPEARTVEICPFSFDSRDKERQLQK-----EKKIKELQKGEVPKFKALPLPHFDTI 577 K + PE++T E+C D ++R +K + L+K + F+ + +DTI Sbjct: 477 LKMEFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTI 536 Query: 578 N-LPEKKVKNVTQIEPFCLETD 598 + L K++NV ++ L TD Sbjct: 537 HRLETNKLRNVAKMFAHLLYTD 558 >6ID1-U nrPDB Length = 894 Score = 29.7 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 663 ATEKRAKERQELEKRMAEVEAQKAQQLEEARLQ-EEEQKKEELARLRRE 710 A R + + +E+R + +A+ L +A+ E+E++++EL RLR E Sbjct: 7 AASGRFESAKSIEERKEQTRNARAEVLRQAKANFEKEERRKELKRLRGE 55 >5T4Q-I nrPDB Length = 155 Score = 28.9 bits (63), Expect = 7.8, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 5/76 (6%) Query: 641 KKEKKSVAEGL-SGSLVQEPFQLA----TEKRAKERQELEKRMAEVEAQKAQQLEEARLQ 695 +K +K +A+GL S + LA T++ K + E + + + +++Q L+EA+ + Sbjct: 33 EKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAE 92 Query: 696 EEEQKKEELARLRREL 711 E+++ + +A+ + E+ Sbjct: 93 AEQERTKIVAQAQAEI 108 >6C0F-8 nrPDB Length = 434 Score = 28.6 bits (62), Expect = 9.7, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 31/45 (68%) Query: 666 KRAKERQELEKRMAEVEAQKAQQLEEARLQEEEQKKEELARLRRE 710 ++A +R+E +KR + +E + +++ E + E ++++EE R+R++ Sbjct: 348 RKAIKRKEAQKRKSAIEWSERKRVVEDTISERQKRREENLRIRKD 392 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.128 0.359 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,714,183 Number of Sequences: 36641 Number of extensions: 1191727 Number of successful extensions: 3471 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 87 Number of HSP's that attempted gapping in prelim test: 3309 Number of HSP's gapped (non-prelim): 210 length of query: 747 length of database: 10,336,785 effective HSP length: 104 effective length of query: 643 effective length of database: 6,526,121 effective search space: 4196295803 effective search space used: 4196295803 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 63 (28.9 bits)