BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9UKT4 (447 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4UI9-S nrPDB 917 0.0 2LWR-A nrPDB 42 4e-04 2M48-A nrPDB 39 0.003 6DJX-A nrPDB 37 0.013 4K95-A nrPDB 34 0.11 4ZYN-A nrPDB 34 0.16 4K7D-A nrPDB 33 0.28 6BH8-A nrPDB 32 0.52 1BZS-A nrPDB 32 0.75 4WO8-A nrPDB 28 6.3 6DJW-A nrPDB 28 8.7 >4UI9-S nrPDB Length = 447 Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/447 (99%), Positives = 445/447 (99%) Query: 1 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL 60 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL Sbjct: 1 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL 60 Query: 61 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKEN 120 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKEN Sbjct: 61 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKEN 120 Query: 121 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI 180 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI Sbjct: 121 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI 180 Query: 181 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG 240 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG Sbjct: 181 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG 240 Query: 241 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ 300 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ Sbjct: 241 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ 300 Query: 301 RVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN 360 RVTENNNKFSPHASTREYVMFR PL SVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN Sbjct: 301 RVTENNNKFSPHASTREYVMFRIPLKSVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN 360 Query: 361 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS 420 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS Sbjct: 361 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS 420 Query: 421 DGKLLKASCKIGPLPGTKKSKKNLRRL 447 DGKLLKASCKIGPLPGTKKSKKNLRRL Sbjct: 421 DGKLLKASCKIGPLPGTKKSKKNLRRL 447 >2LWR-A nrPDB Length = 68 Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Query: 353 GSTYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCN 412 GS +R +E S V T+K S K C +C +P + D C R GCGF++C +C Sbjct: 1 GSAEARWDEASNV--TIKV--STKPCPKCRTPTERDGGCMHMVCTRAGCGFEWC--WVCQ 54 Query: 413 YHTTKDC 419 T+DC Sbjct: 55 TEWTRDC 61 >2M48-A nrPDB Length = 141 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 374 SLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDC 419 S K C +C +P + D C R GCGF++C +C T+DC Sbjct: 91 STKPCPKCRTPTERDGGCMHMVCTRAGCGFEWC--WVCQTEWTRDC 134 Score = 27.7 bits (60), Expect = 9.2, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Query: 388 DCYLQRATCKREGCGFDYCTKCLCNYHTTKDCSDG 422 DC ++ TC+ GCG+ +C CL YH + +G Sbjct: 26 DC--RKVTCQ-NGCGYVFCRNCLQGYHIGECLPEG 57 >6DJX-A nrPDB Length = 432 Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 376 KACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDC 419 K C +C +P + D C R GCGF++C +C T+DC Sbjct: 384 KPCPKCRTPTERDGGAMHMVCTRAGCGFEWCW--ICQTEWTRDC 425 >4K95-A nrPDB Length = 470 Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 4/97 (4%) Query: 318 YVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLKA 377 +V R + + + + T + + DQ+ + +R E S+ +T+KK + K Sbjct: 367 FVFCRDCKEAYHEGECDSMFEASGATSQAYRVDQRAAEQARWEEASK--ETIKK--TTKP 422 Query: 378 CIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYH 414 C RCN P + + C + C ++C C C ++ Sbjct: 423 CPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGCEWN 459 >4ZYN-A nrPDB Length = 425 Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust. Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Query: 318 YVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLKA 377 +V R + + + + T + + DQ+ + +R E S+ +T+KK + K Sbjct: 322 FVFCRDCKEAYHEGECDSMFEASGATSQAYRVDQRAAEQARWEEASK--ETIKK--TTKP 377 Query: 378 CIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNY 413 C RCN P + + C + C ++C C C + Sbjct: 378 CPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGCEW 413 >4K7D-A nrPDB Length = 330 Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 4/96 (4%) Query: 318 YVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLKA 377 +V R + + + + T + + DQ+ + +R E S+ +T+KK + K Sbjct: 227 FVFCRDCKEAYHEGECDSMFEASGATSQAYRVDQRAAEQARWEEASK--ETIKK--TTKP 282 Query: 378 CIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNY 413 C RCN P + + C + C ++C C C + Sbjct: 283 CPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGCEW 318 >6BH8-A nrPDB Length = 483 Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 108 LETESKRLHNKENQHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLL 165 L +R++ K HV L + E E SRLY+ S+FS SGL EG+L+ Sbjct: 37 LAQRQRRIY-KTTTHVPPELGQIMDSETFEKSRLYQLDK-STFSFWSGLYSETEGTLI 92 >1BZS-A nrPDB Length = 165 Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 22/42 (52%) Query: 70 RLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETE 111 R+ +YTP E + IKD L + SP++ RI Q E + Sbjct: 18 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEAD 59 >4WO8-A nrPDB Length = 716 Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust. Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 9/139 (6%) Query: 290 GAFQLYSKAIQRVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSN-- 347 G + L +K +TE + H+ R + L K A + + + T L+ Sbjct: 317 GIYDLSNKRRLGLTELDAVTEMHSGVRALLELEVMLQEYNKGAPEGVMPVEPLTYLAKLL 376 Query: 348 QGDQKGSTYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREG------C 401 +G Y+R E+ K + + + Y R+ C R G Sbjct: 377 EGASIEKCYTRKYLTPEIIKKYDGKRTTHGATLAHM-IRNGAYNNRSICPRTGEAECYST 435 Query: 402 GFDYCTKCLCNYHTTKDCS 420 DY +C+YH KD + Sbjct: 436 FIDYLDPLICDYHGVKDSA 454 >6DJW-A nrPDB Length = 349 Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%) Query: 356 YSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYH 414 Y+R+ F+ L+ L C + ++ TC+ GCG+ +C CL YH Sbjct: 284 YARYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPECKKVTCQN-GCGYVFCRNCLQGYH 341 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4UI9-S nrPDB 863 0.0 2LWR-A nrPDB 107 8e-24 Sequences not found previously or not previously below threshold: 2M48-A nrPDB 105 5e-23 6DJX-A nrPDB 99 4e-21 5CAW-A nrPDB 78 1e-14 4K95-A nrPDB 73 3e-13 4ZYN-A nrPDB 73 3e-13 4K7D-A nrPDB 72 5e-13 6HUE-A nrPDB 67 2e-11 6N13-B nrPDB 65 5e-11 4KBL-A nrPDB 47 2e-05 5UDH-A nrPDB 46 3e-05 1WD2-A nrPDB 45 7e-05 2M9Y-A nrPDB 41 0.001 6DJW-A nrPDB 35 0.093 6BH8-A nrPDB 34 0.12 2NLK-A nrPDB 32 0.72 2PBN-A nrPDB 32 0.74 1BZS-A nrPDB 31 0.91 6GLC-A nrPDB 30 2.4 1GOJ-A nrPDB 30 3.0 2LR2-A nrPDB 30 3.1 5XFN-A nrPDB 29 4.4 1OJQ-A nrPDB 29 4.7 >4UI9-S nrPDB Length = 447 Score = 863 bits (2230), Expect = 0.0, Method: Composition-based stats. Identities = 445/447 (99%), Positives = 445/447 (99%) Query: 1 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL 60 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL Sbjct: 1 MSRRPCSCALRPPRCSCSASPSAVTAAGRPRPSDSCKEESSTLSVKMKCDFNCNHVHSGL 60 Query: 61 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKEN 120 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKEN Sbjct: 61 KLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRLHNKEN 120 Query: 121 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI 180 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI Sbjct: 121 QHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQSCLLQI 180 Query: 181 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG 240 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG Sbjct: 181 QSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNIIGRKMG 240 Query: 241 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ 300 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ Sbjct: 241 LECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLYSKAIQ 300 Query: 301 RVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN 360 RVTENNNKFSPHASTREYVMFR PL SVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN Sbjct: 301 RVTENNNKFSPHASTREYVMFRIPLKSVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHN 360 Query: 361 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS 420 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS Sbjct: 361 EFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDCS 420 Query: 421 DGKLLKASCKIGPLPGTKKSKKNLRRL 447 DGKLLKASCKIGPLPGTKKSKKNLRRL Sbjct: 421 DGKLLKASCKIGPLPGTKKSKKNLRRL 447 >2LWR-A nrPDB Length = 68 Score = 107 bits (268), Expect = 8e-24, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Query: 353 GSTYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCN 412 GS +R +E S V T+K S K C +C +P + D C R GCGF++C +C Sbjct: 1 GSAEARWDEASNV--TIKV--STKPCPKCRTPTERDGGCMHMVCTRAGCGFEWC--WVCQ 54 Query: 413 YHTTKDC 419 T+DC Sbjct: 55 TEWTRDC 61 >2M48-A nrPDB Length = 141 Score = 105 bits (261), Expect = 5e-23, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 350 DQKGSTYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKC 409 D + +R +E S V T+K S K C +C +P + D C R GCGF++C Sbjct: 71 DPNRAAEARWDEASNV--TIKV--STKPCPKCRTPTERDGGCMHMVCTRAGCGFEWC--W 124 Query: 410 LCNYHTTKDC 419 +C T+DC Sbjct: 125 VCQTEWTRDC 134 >6DJX-A nrPDB Length = 432 Score = 99.0 bits (245), Expect = 4e-21, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 350 DQKGSTYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKC 409 D + +R +E S+V T+K K C +C +P + D C R GCGF++C Sbjct: 362 DPNRAAEARWDEASKV--TIKVM--TKPCPKCRTPTERDGGAMHMVCTRAGCGFEWC--W 415 Query: 410 LCNYHTTKDC 419 +C T+DC Sbjct: 416 ICQTEWTRDC 425 Score = 34.6 bits (78), Expect = 0.082, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%) Query: 356 YSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHT 415 Y+R+ F+ L+ L C + ++ TC + GCG+ +C CL YH Sbjct: 283 YARYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPECKKVTC-QNGCGYVFCRNCLQGYHL 341 Query: 416 TKDCSDGKLLKAS 428 +G AS Sbjct: 342 GDCLPEGTSTNAS 354 >5CAW-A nrPDB Length = 321 Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 357 SRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTT 416 +R +E S + +K K C +C + + C R CGF +C +C Sbjct: 258 ARWDEAS--STVIKVL--TKPCPKCRTSTERAGGCMHMICTRANCGFHWC--WVCQGPWE 311 Query: 417 KDC 419 +DC Sbjct: 312 RDC 314 Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Query: 354 STYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNY 413 + Y +++ F+ L+ L C D R C CG+ +C KCL + Sbjct: 172 AQYEQYHRFATEEFILQAGGVLCPQPGCGQGILIDQNCNRVQCS---CGYVFCGKCLEGF 228 Query: 414 H 414 H Sbjct: 229 H 229 >4K95-A nrPDB Length = 470 Score = 72.8 bits (177), Expect = 3e-13, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%) Query: 318 YVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLKA 377 +V R + + + + T + + DQ+ + +R E S+ +T+KK + K Sbjct: 367 FVFCRDCKEAYHEGECDSMFEASGATSQAYRVDQRAAEQARWEEASK--ETIKK--TTKP 422 Query: 378 CIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDC 419 C RCN P + + C + C ++C C C + C Sbjct: 423 CPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGC--EWNRAC 462 >4ZYN-A nrPDB Length = 425 Score = 72.8 bits (177), Expect = 3e-13, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 318 YVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLKA 377 +V R + + + + T + + DQ+ + +R E S+ +T+KK + K Sbjct: 322 FVFCRDCKEAYHEGECDSMFEASGATSQAYRVDQRAAEQARWEEASK--ETIKK--TTKP 377 Query: 378 CIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDC 419 C RCN P + + C + C ++C C + C Sbjct: 378 CPRCNVPIEKNGGCMHMKCPQPQCKLEWC--WNCGCEWNRAC 417 >4K7D-A nrPDB Length = 330 Score = 72.0 bits (175), Expect = 5e-13, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 6/102 (5%) Query: 318 YVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSEVAKTLKKNESLKA 377 +V R + + + + T + + DQ+ + +R E S+ +T+KK + K Sbjct: 227 FVFCRDCKEAYHEGECDSMFEASGATSQAYRVDQRAAEQARWEEASK--ETIKK--TTKP 282 Query: 378 CIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHTTKDC 419 C RCN P + + C + C ++C C + C Sbjct: 283 CPRCNVPIEKNGGCMHMKCPQPQCKLEWC--WNCGCEWNRAC 322 >6HUE-A nrPDB Length = 405 Score = 66.6 bits (161), Expect = 2e-11, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Query: 350 DQKGSTYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKC 409 D++ + +R S+ +T+KK + K C RC+ P + + C + C ++C Sbjct: 334 DERAAEQARWEAASK--ETIKK--TTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWC--W 387 Query: 410 LCNYHTTKDC 419 C + C Sbjct: 388 NCGCEWNRVC 397 >6N13-B nrPDB Length = 322 Score = 65.4 bits (158), Expect = 5e-11, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Query: 350 DQKGSTYSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKC 409 D++ + +R S+ +T+KK + K C RC+ P + + C + C ++C Sbjct: 251 DERAAEQARWEAASK--ETIKK--TTKPCPRCHVPVEKNGGCMHMKCPQPQCRLEWC--W 304 Query: 410 LCNYHTTKDC 419 C + C Sbjct: 305 NCGCEWNRVC 314 Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 356 YSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKRE---GCGFDYCTKCLCN 412 Y+R+ ++ L+ L C + + ++ TC+ GCGF +C +C Sbjct: 169 YNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDCRKVTCEGGNGLGCGFAFCRECKEA 228 Query: 413 YH 414 YH Sbjct: 229 YH 230 >4KBL-A nrPDB Length = 559 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 360 NEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHT 415 ++ SE + + N K C +C+ + D C+ + C ++C +C Sbjct: 330 DDDSETSNWIAAN--TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFC--WVCLGPW 381 >5UDH-A nrPDB Length = 470 Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 360 NEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHT 415 ++ SE + + N K C +C+ + D C+ + C ++C +C Sbjct: 241 DDDSETSNWIAAN--TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFC--WVCLGPW 292 >1WD2-A nrPDB Length = 60 Score = 45.0 bits (105), Expect = 7e-05, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 374 SLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHT 415 + K C +C+ + D C+ + C ++C +C Sbjct: 5 NTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFC--WVCLGPW 44 >2M9Y-A nrPDB Length = 74 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 360 NEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHT 415 ++ SE + + N K C +C+ + D C+ + C ++C +C Sbjct: 6 DDDSETSNWIAAN--TKECPKCHVTIEKDGGSNHMVCRNQNCKAEFC--WVCLGPW 57 >6DJW-A nrPDB Length = 349 Score = 34.6 bits (78), Expect = 0.093, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%) Query: 356 YSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHT 415 Y+R+ F+ L+ L C + ++ TC + GCG+ +C CL YH Sbjct: 284 YARYQRFATEEYVLQAGGVLCPQPGCGMGLLVEPECKKVTC-QNGCGYVFCRNCLQGYHL 342 Query: 416 TKDC 419 DC Sbjct: 343 G-DC 345 >6BH8-A nrPDB Length = 483 Score = 34.2 bits (77), Expect = 0.12, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 108 LETESKRLHNKENQHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLL 165 L +R++ K HV L + E E SRLY+ S+FS SGL EG+L+ Sbjct: 37 LAQRQRRIY-KTTTHVPPELGQIMDSETFEKSRLYQLDK-STFSFWSGLYSETEGTLI 92 >2NLK-A nrPDB Length = 627 Score = 31.6 bits (70), Expect = 0.72, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Query: 281 WKKILEDDKGAFQLYSKAIQRVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKD 340 W+ I E + G + + +++ +++ P ++ EY L S + A T + Sbjct: 111 WRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFS 170 Query: 341 AQTKLSNQGDQKGSTYSRHNE 361 + +G QKG+ R NE Sbjct: 171 IRNTKVKKG-QKGNPKGRQNE 190 >2PBN-A nrPDB Length = 313 Score = 31.6 bits (70), Expect = 0.74, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Query: 281 WKKILEDDKGAFQLYSKAIQRVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKD 340 W+ I E + G + + +++ +++ P ++ EY L S + A T + Sbjct: 119 WRMIWEQNTGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFS 178 Query: 341 AQTKLSNQGDQKGSTYSRHNE 361 + +G QKG+ R NE Sbjct: 179 IRNTKVKKG-QKGNPKGRQNE 198 >1BZS-A nrPDB Length = 165 Score = 31.2 bits (69), Expect = 0.91, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 22/42 (52%) Query: 70 RLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETE 111 R+ +YTP E + IKD L + SP++ RI Q E + Sbjct: 18 RIRNYTPQLSEAEVERAIKDAFELWSVASPLIFTRISQGEAD 59 >6GLC-A nrPDB Length = 389 Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 356 YSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKRE---GCGFDYCTKCLCN 412 Y+R+ ++ L+ L C + + ++ TC+ GCGF +C +C Sbjct: 314 YNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDCRKVTCEGGNGLGCGFAFCRECKEA 373 Query: 413 YH 414 YH Sbjct: 374 YH 375 >1GOJ-A nrPDB Length = 355 Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 164 LLEENFGDSLQSCLLQIQSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEI 223 +L+E+ G + ++ L+ SP Y + L L F + ++K AK N ++ LK++ Sbjct: 290 ILQESLGGNSRTTLIINCSPSSYNDAETLSTLRF-GMRAKSIKNKAKVNAELSPAELKQM 348 Query: 224 IARG 227 +A+ Sbjct: 349 LAKA 352 >2LR2-A nrPDB Length = 88 Score = 29.6 bits (65), Expect = 3.1, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Query: 306 NNKFSPHASTREYVMFRTP-LASVQKSAAQTSLKKDAQTKLSNQGDQKGSTYSRHNEFSE 364 +NKF+ Y + P L Q++A SLK D+ +N G +G S + Sbjct: 15 DNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDSYIDTNNDGAYEGDELSGSQSANL 74 Query: 365 VAKTLKKNESLKA 377 +A+ K N++ Sbjct: 75 LAEAKKLNDAQAP 87 >5XFN-A nrPDB Length = 316 Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 366 AKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDY-CTKCLCNYHTTK 417 ++T+ L +C +C DC++ RA EG G + C +C+ T + Sbjct: 71 SETVVPGNRLVSCEKCRHAYHQDCHVPRAPAPGEGEGTSWVCRQCVFAIATKR 123 >1OJQ-A nrPDB Length = 212 Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 7/45 (15%) Query: 118 KENQHVQQTLNSTNEIEALET-------SRLYEDSGYSSFSLQSG 155 +E+ H+ Q N+ EAL + SR+Y ++GYSS L SG Sbjct: 100 REDLHMLQQTNNGQYNEALVSKLNNLMNSRIYRENGYSSTQLVSG 144 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.136 0.414 Lambda K H 0.267 0.0397 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,459,826 Number of Sequences: 36641 Number of extensions: 636519 Number of successful extensions: 1562 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 1506 Number of HSP's gapped (non-prelim): 62 length of query: 447 length of database: 10,336,785 effective HSP length: 100 effective length of query: 347 effective length of database: 6,672,685 effective search space: 2315421695 effective search space used: 2315421695 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.2 bits)