BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9UKK9 (219 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2DSC-A nrPDB 435 e-123 5C8L-A nrPDB 54 7e-08 1VHG-A nrPDB 51 4e-07 3EEU-A nrPDB 45 4e-05 5I8U-G nrPDB 42 1e-04 1VIU-A nrPDB 40 7e-04 3HHJ-A nrPDB 40 0.001 3A6V-A nrPDB 39 0.002 3I7U-A nrPDB 38 0.003 4V14-A nrPDB 35 0.022 6DBY-A nrPDB 33 0.074 5YGU-B nrPDB 33 0.089 5J3Y-B nrPDB 33 0.11 1SZ3-A nrPDB 32 0.15 2A6T-A nrPDB 32 0.15 5LPG-A nrPDB 32 0.17 3Q91-A nrPDB 31 0.35 4ZBP-A nrPDB 31 0.38 2QJO-A nrPDB 31 0.39 1GA7-A nrPDB 30 1.2 5WS7-A nrPDB 29 1.5 1VC9-A nrPDB 29 1.6 5LTU-A nrPDB 29 1.8 1ZO0-A nrPDB 29 2.0 6GLL-A nrPDB 28 2.2 5C6U-A nrPDB 28 2.4 5YFB-A nrPDB 28 2.9 5MZF-A nrPDB 28 3.4 5ANS-A nrPDB 28 4.0 1VK6-A nrPDB 28 4.4 6EHH-A nrPDB 27 5.1 2FVV-A nrPDB 27 5.1 5LON-A nrPDB 27 7.1 4BMK-A nrPDB 27 10.0 >2DSC-A nrPDB Length = 212 Score = 435 bits (1118), Expect = e-123, Method: Compositional matrix adjust. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD Sbjct: 3 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 62 Query: 61 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK Sbjct: 63 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 122 Query: 121 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 180 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ Sbjct: 123 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 182 Query: 181 RLDALVAEEHLTVDARVYSYALALKHANAK 210 RLDALVAEEHLTVDARVYSYALALKHANAK Sbjct: 183 RLDALVAEEHLTVDARVYSYALALKHANAK 212 >5C8L-A nrPDB Length = 182 Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 17/163 (10%) Query: 18 ISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECI 77 +S I +G+++K+E+ P G+T T E + +IP+L + Sbjct: 9 LSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILH-------PGAAMMIPLLPNG----NV 57 Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 137 V++ Q+R + +EFPAG D E A REL EETGY+ + + G S Sbjct: 58 VMIHQYRHAVKKVFLEFPAGKRDHNEETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYS 117 Query: 138 NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 180 N I + + + + G+F+EV+ + DL+Q Sbjct: 118 NEHIDLYLAR------DLTHLEQRLDQGQFIEVVEVKPADLMQ 154 >1VHG-A nrPDB Length = 198 Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Query: 14 KQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLH 73 K I++ E ++ + +E G R +E ++ T R + V ++P++ Sbjct: 9 KPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNR-----EAVMIVPIVD---- 59 Query: 74 YECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMD 133 + ++L++++ Y + F GLID GE+ AA REL+EE G+ + + M Sbjct: 60 -DHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMA 118 Query: 134 PGLSNCTIHIVTVT-INGDDAENARPKPKP 162 P + ++IV + + E P+P P Sbjct: 119 PSYFSSKMNIVVAQDLYPESLEGDEPEPLP 148 >3EEU-A nrPDB Length = 153 Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Query: 48 SVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYC--IEFPAGLIDDGETP 105 +V+ +K + G IPV+ L + +LV Q RP EFP G I++GETP Sbjct: 6 AVESKQKKSKIRKG-HWIPVVAGFLRKDGKILVGQ-RPENNSLAGQWEFPGGKIENGETP 63 Query: 106 EAAALRELEEETGYKGDIAECSPAVCMDPG 135 E A REL EE G + ++ E A G Sbjct: 64 EEALARELNEELGIEAEVGELKLACTHSYG 93 >5I8U-G nrPDB Length = 207 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 77 IVLVKQFRPPMGGYCIEFPAGLID-DGETPEAAALRELEEETGYKGDIAECSPAVCMDPG 135 I +V Q+R G E PAGL+D GE P A REL EE G + + + PG Sbjct: 57 IPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPG 116 Query: 136 LSNCTIHIVTVT 147 S+ ++ + T Sbjct: 117 FSDESVRVYLAT 128 >1VIU-A nrPDB Length = 203 Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 53/115 (46%), Gaps = 12/115 (10%) Query: 75 ECIVLVKQFRPPM------GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSP 128 + +VL++QFR G IE AGL+D+ E PE +E EETGY+ Sbjct: 60 KTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDE-PEVCIRKEAIEETGYEVGEVRKLF 118 Query: 129 AVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPG-DGEFVEVISLPKNDLLQRL 182 + M PG IH + ++N R G + E +EV+ LP + L+ + Sbjct: 119 ELYMSPGGVTELIHFFI----AEYSDNQRANAGGGVEDEDIEVLELPFSQALEMI 169 >3HHJ-A nrPDB Length = 158 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 17/26 (65%), Positives = 21/26 (80%) Query: 93 EFPAGLIDDGETPEAAALRELEEETG 118 EFP G ++ GETPEA+ +RELEEE G Sbjct: 59 EFPGGKVEQGETPEASLIRELEEELG 84 >3A6V-A nrPDB Length = 129 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 17/27 (62%), Positives = 21/27 (77%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETG 118 +EFP G I+ GETPE A +REL+EE G Sbjct: 33 LEFPGGKIEMGETPEQAVVRELQEEVG 59 >3I7U-A nrPDB Length = 134 Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/30 (60%), Positives = 22/30 (73%) Query: 94 FPAGLIDDGETPEAAALRELEEETGYKGDI 123 FP G I+ GE PE A+RE+ EETG KG+I Sbjct: 29 FPKGNIEPGEKPEETAVREVWEETGVKGEI 58 >4V14-A nrPDB Length = 138 Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust. Identities = 17/31 (54%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Query: 88 GGYCIEFPAGLIDDGETPEAAALRELEEETG 118 GG+ EFP G ++ GE+ E A +RELEEE G Sbjct: 37 GGFW-EFPGGKVEAGESREQAMVRELEEEIG 66 >6DBY-A nrPDB Length = 150 Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 57 QTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEE 116 T + + + V+ L+ I+L ++ R +G P G ++ GE+ E A RE+ EE Sbjct: 5 STGEAIPRVAVVVFILNGNSILLGRR-RSSIGNSTFALPGGHLEFGESFEECAAREVMEE 63 Query: 117 TGYK 120 TG K Sbjct: 64 TGLK 67 >5YGU-B nrPDB Length = 168 Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 19/32 (59%) Query: 87 MGGYCIEFPAGLIDDGETPEAAALRELEEETG 118 G + +FP G I+ GE+ E A REL EE G Sbjct: 28 FGQHSWQFPQGGINPGESAEQAMYRELFEEVG 59 >5J3Y-B nrPDB Length = 242 Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 19/86 (22%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 137 VLVK ++ G FP G ID E+ A+RE+ EETG+ +CS + +P Sbjct: 112 VLVKGWKASSGW---GFPKGKIDKDESDVDCAIREVYEETGF-----DCSSRI--NPN-- 159 Query: 138 NCTIHIVTVTINGDDAENARPKPKPG 163 + +TI G +N R PG Sbjct: 160 ----EFIDMTIRG---QNVRLYIIPG 178 >1SZ3-A nrPDB Length = 159 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 14/26 (53%), Positives = 20/26 (76%) Query: 95 PAGLIDDGETPEAAALRELEEETGYK 120 P+G ++DGE P+ AA+RE EETG + Sbjct: 48 PSGAVEDGENPQDAAVREACEETGLR 73 >2A6T-A nrPDB Length = 271 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 19/86 (22%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 137 VLVK ++ G FP G ID E+ A+RE+ EETG+ +CS + +P Sbjct: 117 VLVKGWKASSGW---GFPKGKIDKDESDVDCAIREVYEETGF-----DCSSRI--NPN-- 164 Query: 138 NCTIHIVTVTINGDDAENARPKPKPG 163 + +TI G +N R PG Sbjct: 165 ----EFIDMTIRG---QNVRLYIIPG 183 >5LPG-A nrPDB Length = 164 Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 9/113 (7%) Query: 73 HYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCM 132 H C++L K+ + +G + P G ++ GET E A RE EE + A + Sbjct: 25 HPRCVLLGKR-KGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALH--LKNVHFASVV 81 Query: 133 DPGLSNCTIHIVTVTINGD-----DAENARPKPKPGDG-EFVEVISLPKNDLL 179 + + H VT+ + G+ D+E +P+ + E+V LP D L Sbjct: 82 NSFIEKENYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWVPWEELPPLDQL 134 >3Q91-A nrPDB Length = 218 Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust. Identities = 49/190 (25%), Positives = 69/190 (36%), Gaps = 55/190 (28%) Query: 24 SEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQF 83 S G + E + G ++W+ +K T D V V L +VLVKQF Sbjct: 8 SSGVDLGTENLYFQSMNGAQKSWDFMK-------THDSVTV---LLFNSSRRSLVLVKQF 57 Query: 84 RPPM-------------------------------GGYCIEFPAGLIDD-GETPEAAALR 111 RP + G +E AGL+D G + E A + Sbjct: 58 RPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVACK 117 Query: 112 ELEEETGYKGDIAECSPAVCMDPGL----SNCTIHIVTVTINGDDAENARPKPKPG---D 164 E EE GY ++ G+ S T+ VT DA+ R P G + Sbjct: 118 EAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVT----DAQ--RSGPGGGLVEE 171 Query: 165 GEFVEVISLP 174 GE +EV+ LP Sbjct: 172 GELIEVVHLP 181 >4ZBP-A nrPDB Length = 310 Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 19/34 (55%) Query: 93 EFPAGLIDDGETPEAAALRELEEETGYKGDIAEC 126 + P G+I++GE RE+EEETG D E Sbjct: 163 KLPTGVINEGEDIWTGVAREVEEETGIIADFVEV 196 >2QJO-A nrPDB Length = 341 Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 75 ECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120 +++ +Q +P +G I P G I ET LREL+EET K Sbjct: 215 HVLMVRRQAKPGLG--LIALPGGFIKQNETLVEGMLRELKEETRLK 258 >1GA7-A nrPDB Length = 209 Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%) Query: 77 IVLVKQFRPPMGG-----YCIEFPAGLIDDGETPEAAALRELEEETG 118 +VL++Q R + +E AG+I++GE+ E A RE EE G Sbjct: 72 VVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAG 118 >5WS7-A nrPDB Length = 156 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 96 AGLIDDGETPEAAALRELEEETGYKGD----IAECSPAVCMDPGLSNCTIHIVTVTINGD 151 G + +GET E A REL+EE+G D + + +P L + + T +I G Sbjct: 36 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHV-FATDSIQGT 94 Query: 152 DAENARPKP 160 E+ +P Sbjct: 95 PVESDEMRP 103 >1VC9-A nrPDB Length = 126 Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Query: 89 GYCIEFPAGLIDDGETPEAAALRELEEETGYKGDI 123 G+ + FP G + GE+ E AA+RE+ E+TG + ++ Sbjct: 24 GFWV-FPKGHPEPGESLEEAAVREVWEQTGVRAEV 57 >5LTU-A nrPDB Length = 180 Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 30/62 (48%) Query: 95 PAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAE 154 P G ++ E P AA+RE+ EE G KG + ++++TVT +D E Sbjct: 49 PGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWE 108 Query: 155 NA 156 ++ Sbjct: 109 DS 110 >1ZO0-A nrPDB Length = 126 Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 19/41 (46%) Query: 88 GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSP 128 GG IE PAG + +G AAL E EE + C P Sbjct: 44 GGLYIELPAGPLPEGSKDSFAALLEFAEEQLRADHVFICFP 84 >6GLL-A nrPDB Length = 182 Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 6/108 (5%) Query: 57 QTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEE 116 Q A G + + L L + ++L + R G F G + +GET E A REL+EE Sbjct: 24 QGAMGASRLYTLVLVLQPQRVLLGMKKRGFGAGRWAGF-GGKVQEGETIEDGARRELQEE 82 Query: 117 TGYKGD----IAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKP 160 +G D + + +P L + + T +I G E+ +P Sbjct: 83 SGLTVDALHKVGQIVFEFVGEPELMDVHV-FCTDSIQGTPVESDEMRP 129 >5C6U-A nrPDB Length = 435 Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 8/59 (13%) Query: 6 PTESSQNGKQYIISEELIS-----EGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTA 59 P Q+G + EEL++ +G W + +P+G T +WE+V+R + A Sbjct: 154 PIPMLQDGPDVDLIEELVAVDPAIKGMWTV---PVFGNPSGVTYSWETVRRLVQMRTAA 209 >5YFB-A nrPDB Length = 703 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 9/92 (9%) Query: 35 TYMDPTGKTRTWESVKRTTRKEQTADGVAVI---PVLQRTLHYECIVLVKQFRPP--MGG 89 TY+DP G WE K+ +A A++ P L ++L + V FR P Sbjct: 312 TYVDPYGGRAEWEGFTAIVDKQLSAKYEALVNGAPKLIKSLPWGTDFEVDVFRKPDFTAL 371 Query: 90 YCIEFPAGLIDDG-ETPEAAALRELEEETGYK 120 + F G I G P E+ E TG+K Sbjct: 372 EVVSFATGGIPAGINIPN---YYEVRESTGFK 400 >5MZF-A nrPDB Length = 176 Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust. Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 10/87 (11%) Query: 96 AGLIDDGETPEAAALRELEEETGYKGD----IAECSPAVCMDPGLSNCTIHIVTVTINGD 151 G + +GET E A REL EE+G D + + +P L + I T ++ G Sbjct: 56 GGKVQEGETIEDGAKRELREESGLTVDTLHKVGQIMFEFVGEPELMDVHI-FCTDSVQGT 114 Query: 152 DAENARPKPKPGDGEFVEVISLPKNDL 178 E+ +P ++ ++ +P D+ Sbjct: 115 PVESDEMRP-----QWFQLDQIPFTDM 136 >5ANS-A nrPDB Length = 175 Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 96 AGLIDDGETPEAAALRELEEETGYKGD----IAECSPAVCMDPGLSNCTIHIVTVTINGD 151 G + +GET E A REL+EE+G D + + +P L + + T +I G Sbjct: 55 GGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHV-FCTDSIQGT 113 Query: 152 DAENARPKP 160 E+ +P Sbjct: 114 PVESDEMRP 122 >1VK6-A nrPDB Length = 269 Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Query: 75 ECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120 + I+L + R G + + AG ++ GET E A RE+ EE+G K Sbjct: 151 DSILLAQHTRHRNGVHTV--LAGFVEVGETLEQAVAREVMEESGIK 194 >6EHH-A nrPDB Length = 176 Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 7/71 (9%) Query: 96 AGLIDDGETPEAAALRELEEETGYKGD----IAECSPAVCMDPGLSNCTIHIVTVT-ING 150 G + +GET E A REL EE+G D + S P L + +HI + ++G Sbjct: 56 GGKVQEGETIEDGAKRELLEESGLSVDTLHKVGHISFEFVGSPELMD--VHIFSADHVHG 113 Query: 151 DDAENARPKPK 161 E+ +P+ Sbjct: 114 TPTESEEMRPQ 124 >2FVV-A nrPDB Length = 194 Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 95 PAGLIDDGETPEAAALRELEEETGYKGDIA 124 P G ++ E P AA+RE+ EE G KG + Sbjct: 71 PGGGMEPEEEPSVAAVREVCEEAGVKGTLG 100 >5LON-A nrPDB Length = 281 Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 94 FPAGLIDDGETPEAAALRELEEETGY 119 FP G I E A +RE++EETG+ Sbjct: 130 FPRGKIGKDEDDVACCIREVKEETGF 155 >4BMK-A nrPDB Length = 442 Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%) Query: 156 ARPKPKPGDGEFVEVISLPKNDLLQRLDALVAEEHLTVDARV 197 A+P P D + P+ DLL + D L+AE +D+ V Sbjct: 27 AQPHALPADAPDIA----PERDLLSKFDGLIAERQKLLDSGV 64 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2DSC-A nrPDB 334 2e-92 5C8L-A nrPDB 194 3e-50 1VHG-A nrPDB 167 3e-42 1VIU-A nrPDB 131 2e-31 5I8U-G nrPDB 119 9e-28 3EEU-A nrPDB 105 2e-23 3HHJ-A nrPDB 60 6e-10 Sequences not found previously or not previously below threshold: 1GA7-A nrPDB 61 5e-10 2RRK-A nrPDB 55 2e-08 4V14-A nrPDB 53 8e-08 3I7U-A nrPDB 53 1e-07 5OTN-A nrPDB 51 5e-07 3Q91-A nrPDB 50 8e-07 6DBY-A nrPDB 49 1e-06 6EHH-A nrPDB 48 3e-06 3A6V-A nrPDB 46 1e-05 5MZF-A nrPDB 45 3e-05 1SZ3-A nrPDB 44 5e-05 5YGU-B nrPDB 43 8e-05 5J3Y-B nrPDB 43 1e-04 2A6T-A nrPDB 43 1e-04 5WS7-A nrPDB 42 2e-04 4ZBP-A nrPDB 42 2e-04 1VC9-A nrPDB 42 2e-04 5LON-A nrPDB 42 2e-04 3SHD-A nrPDB 41 3e-04 5ANS-A nrPDB 41 4e-04 2QJT-B nrPDB 41 4e-04 6GLL-A nrPDB 41 5e-04 5LPG-A nrPDB 40 8e-04 2FVV-A nrPDB 39 0.001 5QHA-A nrPDB 39 0.001 5T3P-A nrPDB 39 0.002 5LTU-A nrPDB 39 0.002 1VK6-A nrPDB 38 0.003 2A8R-A nrPDB 37 0.006 6DT3-A nrPDB 37 0.006 3OGA-A nrPDB 37 0.007 3N77-A nrPDB 37 0.007 5CFI-A nrPDB 36 0.009 2QJO-A nrPDB 36 0.011 1KTG-A nrPDB 36 0.014 4IJX-A nrPDB 35 0.021 2B0V-A nrPDB 34 0.050 1QVJ-A nrPDB 34 0.051 3BHO-A nrPDB 32 0.27 2I8U-A nrPDB 31 0.36 5OPG-A nrPDB 31 0.39 3F1B-A nrPDB 31 0.40 5U7F-A nrPDB 31 0.59 3WEU-A nrPDB 30 0.92 5LF8-A nrPDB 29 1.4 >2DSC-A nrPDB Length = 212 Score = 334 bits (855), Expect = 2e-92, Method: Composition-based stats. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 60 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD Sbjct: 3 MESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTAD 62 Query: 61 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 120 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK Sbjct: 63 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYK 122 Query: 121 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 180 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ Sbjct: 123 GDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQ 182 Query: 181 RLDALVAEEHLTVDARVYSYALALKHANAK 210 RLDALVAEEHLTVDARVYSYALALKHANAK Sbjct: 183 RLDALVAEEHLTVDARVYSYALALKHANAK 212 >5C8L-A nrPDB Length = 182 Score = 194 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 17/165 (10%) Query: 18 ISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECI 77 +S I +G+++K+E+ P G+T T E + +IP+L + Sbjct: 9 LSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILH-------PGAAMMIPLLPNG----NV 57 Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 137 V++ Q+R + +EFPAG D E A REL EETGY+ + + G S Sbjct: 58 VMIHQYRHAVKKVFLEFPAGKRDHNEETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYS 117 Query: 138 NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRL 182 N I + + + + G+F+EV+ + DL+Q + Sbjct: 118 NEHIDLYLAR------DLTHLEQRLDQGQFIEVVEVKPADLMQLV 156 >1VHG-A nrPDB Length = 198 Score = 167 bits (423), Expect = 3e-42, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 11/150 (7%) Query: 14 KQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLH 73 K I++ E ++ + +E G R +E ++ T R + V ++P++ Sbjct: 9 KPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRPTNR-----EAVMIVPIVD---- 59 Query: 74 YECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMD 133 + ++L++++ Y + F GLID GE+ AA REL+EE G+ + + M Sbjct: 60 -DHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTFLKKLSMA 118 Query: 134 PGLSNCTIHIVTVT-INGDDAENARPKPKP 162 P + ++IV + + E P+P P Sbjct: 119 PSYFSSKMNIVVAQDLYPESLEGDEPEPLP 148 >1VIU-A nrPDB Length = 203 Score = 131 bits (330), Expect = 2e-31, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 18/176 (10%) Query: 14 KQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLH 73 +Q + ++ I + L TY + E ++ +G +L Sbjct: 5 QQITLIKDKILSDNYFTLHNITY---DLTRKDGEVIRHKREVYDRGNGAT---ILLYNTK 58 Query: 74 YECIVLVKQFRPPM------GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS 127 + +VL++QFR G IE AGL+D+ E PE +E EETGY+ Sbjct: 59 KKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDE-PEVCIRKEAIEETGYEVGEVRKL 117 Query: 128 PAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPG-DGEFVEVISLPKNDLLQRL 182 + M PG IH + ++N R G + E +EV+ LP + L+ + Sbjct: 118 FELYMSPGGVTELIHFFIA----EYSDNQRANAGGGVEDEDIEVLELPFSQALEMI 169 >5I8U-G nrPDB Length = 207 Score = 119 bits (298), Expect = 9e-28, Method: Composition-based stats. Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 15/144 (10%) Query: 18 ISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECI 77 IS E + G L + P G T E V+ VA++ + I Sbjct: 9 ISSETLHTGAIFALRRDQVRMPGGGIVTREVVEHF-------GAVAIVAMDDNG----NI 57 Query: 78 VLVKQFRPPMGGYCIEFPAGLID-DGETPEAAALRELEEETGYKGDIAECSPAVCMDPGL 136 +V Q+R G E PAGL+D GE P A REL EE G + + + PG Sbjct: 58 PMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGF 117 Query: 137 SNCTIHIVTVTINGDDAENARPKP 160 S+ ++ + T + RP+ Sbjct: 118 SDESVRVYLATGLREVG---RPEA 138 >3EEU-A nrPDB Length = 153 Score = 105 bits (261), Expect = 2e-23, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Query: 48 SVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYC--IEFPAGLIDDGETP 105 +V+ +K + G IPV+ L + +LV Q RP EFP G I++GETP Sbjct: 6 AVESKQKKSKIRKG-HWIPVVAGFLRKDGKILVGQ-RPENNSLAGQWEFPGGKIENGETP 63 Query: 106 EAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIV 144 E A REL EE G + ++ E A G I Sbjct: 64 EEALARELNEELGIEAEVGELKLACTHSYGDVGILILFY 102 >1GA7-A nrPDB Length = 209 Score = 60.6 bits (145), Expect = 5e-10, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 13/172 (7%) Query: 17 IISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYEC 76 II+ E + G + L Y + R + + + + +L + Sbjct: 18 IIARETLYRG-FFSL--DLYRF---RHRLFNGQMSHEVRREIFERGHAAVLLPFDPVRDE 71 Query: 77 IVLVKQFRPPM-----GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVC 131 +VL++Q R + +E AG+I++GE+ E A RE EE G + + Sbjct: 72 VVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKPVLSFL 131 Query: 132 MDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 183 PG ++ I+ ++ A + E + V + + Q ++ Sbjct: 132 ASPGGTSERSSIMVGEVDATTASGIH--GLADENEDIRVHVVSREQAYQWVE 181 >3HHJ-A nrPDB Length = 158 Score = 60.2 bits (144), Expect = 6e-10, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 3/84 (3%) Query: 60 DGVAVIPVLQRTLHYECIVLVKQFRPPMGGY--CIEFPAGLIDDGETPEAAALRELEEET 117 +I V L + VL+ Q RP EFP G ++ GETPEA+ +RELEEE Sbjct: 25 KSSLLIVVACALLDQDNRVLLTQ-RPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEEL 83 Query: 118 GYKGDIAECSPAVCMDPGLSNCTI 141 G P G + Sbjct: 84 GVHVQADNLFPLTFASHGYETFHL 107 >2RRK-A nrPDB Length = 140 Score = 55.2 bits (131), Expect = 2e-08, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 60 DGVAVIPVLQRTLHYECIVLVKQFRPPMGGY--CIEFPAGLIDDGETPEAAALRELEEET 117 + +I V+ + + +L+ Q RP EF G ++ E+ A +REL EE Sbjct: 4 GSMKMIEVVAAIIERDGKILLAQ-RPAQSDQAGLWEFAGGKVEPDESQRQALVRELREEL 62 Query: 118 GYKGDIAEC 126 G + + E Sbjct: 63 GIEATVGEY 71 >4V14-A nrPDB Length = 138 Score = 53.3 bits (126), Expect = 8e-08, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 4/127 (3%) Query: 62 VAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKG 121 + ++ + I + K+ G EFP G ++ GE+ E A +RELEEE G Sbjct: 10 IHIVAGIIFNSDQSEIFITKRPDHLHKGGFWEFPGGKVEAGESREQAMVRELEEEIGITV 69 Query: 122 DIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQR 181 + D + + + VT + + G +V++ L + Sbjct: 70 TEQQAFQHFDFDYTDKSLSFDFMLVTAF----DGQPHGREGQQGGWVKIADLANYRFPEA 125 Query: 182 LDALVAE 188 D +V + Sbjct: 126 NDPVVKQ 132 >3I7U-A nrPDB Length = 134 Score = 52.5 bits (124), Expect = 1e-07, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 40/107 (37%), Gaps = 5/107 (4%) Query: 70 RTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPA 129 L + VL+ FP G I+ GE PE A+RE+ EETG KG+I + Sbjct: 9 GVLFKDGEVLL----IKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGE 64 Query: 130 VCMDPGLSNCTIHIVTVTINGDDAENA-RPKPKPGDGEFVEVISLPK 175 + L I E RP + D +F + K Sbjct: 65 IHYWYTLKGERIFKTVKYYLMKYKEGEPRPSWEVKDAKFFPIKEAKK 111 >5OTN-A nrPDB Length = 159 Score = 50.6 bits (119), Expect = 5e-07, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 8/106 (7%) Query: 76 CIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPG 135 VL+ + G G + GET E AA REL EE+G D + + Sbjct: 19 GRVLLGMKKRGFGAGKWNGFGGKVQTGETIEQAARRELLEESGLTVDTLHKIGNIKFEFI 78 Query: 136 LSNCTIHIVTVTIN---GDDAENARPKPKPGDGEFVEVISLPKNDL 178 + + + G+ AE+ +P ++ ++ +P + + Sbjct: 79 GETELMDVHIFRADNYEGEPAESDEMRP-----QWFDIDKIPFSQM 119 >3Q91-A nrPDB Length = 218 Score = 49.8 bits (117), Expect = 8e-07, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 58/180 (32%), Gaps = 51/180 (28%) Query: 32 EKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPM---- 87 E + G ++W+ +K + VL +VLVKQFRP + Sbjct: 16 ENLYFQSMNGAQKSWDFMKTHDS----------VTVLLFNSSRRSLVLVKQFRPAVYAGE 65 Query: 88 ---------------------------GGYCIEFPAGLID-DGETPEAAALRELEEETGY 119 G +E AGL+D G + E A +E EE GY Sbjct: 66 VERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSLEEVACKEAWEECGY 125 Query: 120 KG--DIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPG---DGEFVEVISLP 174 GL+ + + + R P G +GE +EV+ LP Sbjct: 126 HLAPSDLRRVATYWSGVGLTGSRQTMF----YTEVTDAQRSGPGGGLVEEGELIEVVHLP 181 >6DBY-A nrPDB Length = 150 Score = 49.5 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 13/122 (10%) Query: 51 RTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAAL 110 + E V+ +L +L+ + R +G P G ++ GE+ E A Sbjct: 3 HMSTGEAIPRVAVVVFILNG-----NSILLGRRRSSIGNSTFALPGGHLEFGESFEECAA 57 Query: 111 RELEEETGYKGDIAECS------PAVCMDPG-LSNCTIHIVTVTINGDDAENARPKPKPG 163 RE+ EETG K + + P + +I V V + + +N P+ G Sbjct: 58 REVMEETGLKIEKMKLLTVTNNVFKEAPTPSHYVSVSIRAVLVDPSQE-PKNMEPEKCEG 116 Query: 164 DG 165 Sbjct: 117 WD 118 >6EHH-A nrPDB Length = 176 Score = 48.3 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 2/101 (1%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 137 VL+ + G G + +GET E A REL EE+G D + + S Sbjct: 38 VLLGMKKRGFGAGRWNGFGGKVQEGETIEDGAKRELLEESGLSVDTLHKVGHISFEFVGS 97 Query: 138 NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDL 178 + + + D + + ++ ++ +P D+ Sbjct: 98 PELMDVHI--FSADHVHGTPTESEEMRPQWFQLDQIPFADM 136 >3A6V-A nrPDB Length = 129 Score = 46.0 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGD 151 +EFP G I+ GETPE A +REL+EE G + + + I T+ Sbjct: 33 LEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSLFEKL--EYEFPDRHI-----TLWFW 85 Query: 152 DAENARPKPKPGDGEFVEVISL 173 E +P +G+ E +SL Sbjct: 86 LVERWEGEPWGKEGQPGEWMSL 107 >5MZF-A nrPDB Length = 176 Score = 44.8 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 2/101 (1%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 137 VL+ + G G + +GET E A REL EE+G D + + Sbjct: 38 VLLGMKKRGFGAGRWNGFGGKVQEGETIEDGAKRELREESGLTVDTLHKVGQIMFEFVGE 97 Query: 138 NCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDL 178 + + D + + ++ ++ +P D+ Sbjct: 98 PELMDVHI--FCTDSVQGTPVESDEMRPQWFQLDQIPFTDM 136 >1SZ3-A nrPDB Length = 159 Score = 44.1 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Query: 85 PPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPA-VCMDPGLSNCTIHI 143 P P+G ++DGE P+ AA+RE EETG + + A + P H+ Sbjct: 38 HPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPDGVLILRHV 97 Query: 144 VTVTING 150 Sbjct: 98 WLAEPEP 104 >5YGU-B nrPDB Length = 168 Score = 43.3 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%) Query: 88 GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS 127 G + +FP G I+ GE+ E A REL EE G Sbjct: 29 GQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRIL 68 >5J3Y-B nrPDB Length = 242 Score = 42.5 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD 122 VLVK ++ G FP G ID E+ A+RE+ EETG+ Sbjct: 112 VLVKGWKASSG---WGFPKGKIDKDESDVDCAIREVYEETGFDCS 153 >2A6T-A nrPDB Length = 271 Score = 42.5 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD 122 VLVK ++ G FP G ID E+ A+RE+ EETG+ Sbjct: 117 VLVKGWKASSG---WGFPKGKIDKDESDVDCAIREVYEETGFDCS 158 >5WS7-A nrPDB Length = 156 Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 10/105 (9%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD----IAECSPAVCMD 133 VL+ + G G + +GET E A REL+EE+G D + + + Sbjct: 18 VLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGE 77 Query: 134 PGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDL 178 P L + + T +I G E+ +P + ++ +P D+ Sbjct: 78 PELMDVHV-FATDSIQGTPVESDEMRP-----SWFQLDQIPFKDM 116 >4ZBP-A nrPDB Length = 310 Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 58/172 (33%), Gaps = 14/172 (8%) Query: 18 ISEELISEG-KWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAVIPVLQRTLHYEC 76 + E +SEG ++ E M + + T +++ G VI Sbjct: 92 LVEAAVSEGFRYHHAEPEYLMLVSWISETPDTI-PANASHVVGAGALVI------NKNTK 144 Query: 77 IVLVKQFRPPM--GGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS-PAVCMD 133 VLV Q R + P G+I++GE RE+EEETG D E Sbjct: 145 EVLVVQERSGFFKDKNVWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLAFRQSHK 204 Query: 134 PGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFV---EVISLPKNDLLQRL 182 L T ++ + K + +++ E + P N + Sbjct: 205 AILKKKTDMFFLCVLSPRSYDITEQKSEILQAKWMPIQEYVDQPWNKKNEMF 256 >1VC9-A nrPDB Length = 126 Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 91 CIEFPAGLIDDGETPEAAALRELEEETGYKGDI-AECSPAVCMDPGLSNCTIHIVTVTIN 149 FP G + GE+ E AA+RE+ E+TG + ++ P ++P +H + Sbjct: 25 FWVFPKGHPEPGESLEEAAVREVWEQTGVRAEVLLPLYPTRYVNPKGVEREVHWFLMRGE 84 Query: 150 G 150 G Sbjct: 85 G 85 >5LON-A nrPDB Length = 281 Score = 41.7 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 7/126 (5%) Query: 49 VKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAA 108 + + ++ IPV + + + + R + FP G I E A Sbjct: 86 ITPENALVKFSNYKKTIPVRGAAIFNDSLSKILLLR-GINSKHWSFPRGKIGKDEDDVAC 144 Query: 109 ALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFV 168 +RE++EETG+ ++ ++ I V +D E KP + Sbjct: 145 CIREVKEETGFDL-TGFIDADQYVERNMNGKNFKIFLVKGVPEDFEF-----KPEHKNEI 198 Query: 169 EVISLP 174 + I Sbjct: 199 QAIEWK 204 >3SHD-A nrPDB Length = 153 Score = 41.4 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Query: 68 LQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD 122 + +H E LV + G PAG ++ ET AA REL EETG Sbjct: 8 VACVVHAEGKFLVVEETI-NGKALWNQPAGHLEADETLVEAAARELWEETGISAQ 61 >5ANS-A nrPDB Length = 175 Score = 41.0 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 10/105 (9%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD----IAECSPAVCMD 133 VL+ + G G + +GET E A REL+EE+G D + + + Sbjct: 37 VLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGE 96 Query: 134 PGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDL 178 P L + + T +I G E+ +P + ++ +P D+ Sbjct: 97 PELMDVHV-FCTDSIQGTPVESDEMRPC-----WFQLDQIPFKDM 135 >2QJT-B nrPDB Length = 352 Score = 41.0 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 49 VKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAA 108 ++ + + V + + I++V++ P G P G ++ ET A Sbjct: 193 IEYKRLWLKAPFKPNFVTVDALVIVNDHILMVQRKAHP-GKDLWALPGGFLECDETIAQA 251 Query: 109 ALRELEEETGY 119 +REL EET Sbjct: 252 IIRELFEETNI 262 >6GLL-A nrPDB Length = 182 Score = 40.6 bits (93), Expect = 5e-04, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 10/105 (9%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD----IAECSPAVCMD 133 VL+ + G G + +GET E A REL+EE+G D + + + Sbjct: 44 VLLGMKKRGFGAGRWAGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGE 103 Query: 134 PGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDL 178 P L + + T +I G E+ +P + ++ +P D+ Sbjct: 104 PELMDVHV-FCTDSIQGTPVESDEMRPC-----WFQLDQIPFKDM 142 >5LPG-A nrPDB Length = 164 Score = 39.8 bits (91), Expect = 8e-04, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 78 VLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLS 137 VL+ + + +G + P G ++ GET E A RE EE + V Sbjct: 29 VLLGKRKGSVGAGSFQLPGGHLEFGETWEECAQRETWEEAALHLKNVHFASVVNSFI--E 86 Query: 138 NCTIHIVTVTINGD-----DAENARPKPKPGDG-EFVEVISLPKNDLL 179 H VT+ + G+ D+E +P+ + E+V LP D L Sbjct: 87 KENYHYVTILMKGEVDVTHDSEPKNVEPEKNESWEWVPWEELPPLDQL 134 >2FVV-A nrPDB Length = 194 Score = 39.4 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 70 RTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAEC 126 R+ E ++LV R P P G ++ E P AA+RE+ EE G KG + Sbjct: 49 RSESEEEVLLVSSSRHPDR---WIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRL 102 >5QHA-A nrPDB Length = 196 Score = 39.4 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 6/139 (4%) Query: 37 MDPTGKTRTWES-VKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFP 95 M K R + + ++P++ + + V+ + + FP Sbjct: 2 MLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCFP 61 Query: 96 AGLIDDGETPEAA-ALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAE 154 G D + +AA ALRE +EE G + E C+ P L + + G Sbjct: 62 GGKRDPTDMDDAATALREAQEEVGLRPHQVEVV--CCLVPCLIDT--DTLITPFVGLIDH 117 Query: 155 NARPKPKPGDGEFVEVISL 173 N + +P P + + V ++ L Sbjct: 118 NFQAQPNPAEVKDVFLVPL 136 >5T3P-A nrPDB Length = 236 Score = 39.1 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 6/136 (4%) Query: 40 TGKTRTWES-VKRTTRKEQTADGVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGL 98 K R + + ++P++ + + V+ + + FP G Sbjct: 19 DAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCFPGGK 78 Query: 99 IDDGETPEAA-ALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENAR 157 D + +AA ALRE +EE G + E C+ P L + + G N + Sbjct: 79 RDPTDMDDAATALREAQEEVGLRPHQVEVV--CCLVPCLIDT--DTLITPFVGLIDHNFQ 134 Query: 158 PKPKPGDGEFVEVISL 173 +P P + + V ++ L Sbjct: 135 AQPNPAEVKDVFLVPL 150 >5LTU-A nrPDB Length = 180 Score = 38.7 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 70 RTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS 127 R+ + ++LV R P P G ++ E P AA+RE+ EE G KG + Sbjct: 27 RSEQEDEVLLVSSSRYPDQ---WIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLL 81 >1VK6-A nrPDB Length = 269 Score = 37.9 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 64 VIPVLQRTLHYECIVLVKQF-RPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD 122 + P + + + +L+ Q R G + + AG ++ GET E A RE+ EE+G K Sbjct: 139 IAPCIIVAIRRDDSILLAQHTRHRNGVHTV--LAGFVEVGETLEQAVAREVMEESGIKVK 196 Query: 123 IAECSPA 129 + Sbjct: 197 NLRYVTS 203 >2A8R-A nrPDB Length = 212 Score = 37.1 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 33/194 (17%) Query: 2 ESQEPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADG 61 ES+ P ++ K IS + ++LE G ++ + + D Sbjct: 3 ESRSPDRGAKEDKP---RPRNISREESLQLE--------GYKHACHALLHAPSQAKLFDR 51 Query: 62 VAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGE-TPEAAALRELEEETGYK 120 V + VL + ++ + FP G +D + + E RELEEE G Sbjct: 52 VPIRRVLLMMMRFDGR--------------LGFPGGFVDTRDISLEEGLKRELEEELGPA 97 Query: 121 GDIAECSPAVCMDPGL----SNCTIHIVTVTINGDDAENARPKPKPGDGEFVEV---ISL 173 E + + C H + ++ E + +EV I + Sbjct: 98 LATVEVTEDDYRSSQVREHPQKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRV 157 Query: 174 PKNDLLQRLDALVA 187 P L R+ L A Sbjct: 158 PLYTLRDRVGGLPA 171 >6DT3-A nrPDB Length = 144 Score = 37.1 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 6/43 (13%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDP 134 G ++ GE E A RE+ EE G E + P Sbjct: 36 WALSGGGVEPGERIEEALRREIREELG------EKLILTHIAP 72 >3OGA-A nrPDB Length = 165 Score = 36.7 bits (83), Expect = 0.007, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 13/27 (48%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETG 118 G ++ GE E A RE+ EE G Sbjct: 57 WALSGGGVEPGERIEEALRREIREELG 83 >3N77-A nrPDB Length = 144 Score = 36.7 bits (83), Expect = 0.007, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 13/27 (48%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETG 118 G ++ GE E A RE+ EE G Sbjct: 36 WALSGGGVEPGERIEEALRREIREELG 62 >5CFI-A nrPDB Length = 152 Score = 36.4 bits (82), Expect = 0.009, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS 127 P GL ++ E+ A+RE EETG D + Sbjct: 44 WTPPKGLHENNESGLETAVRETLEETGINKDKYKLL 79 >2QJO-A nrPDB Length = 341 Score = 36.4 bits (82), Expect = 0.011, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 52 TTRKEQTADGVAVIPVLQRTLHYECIVLVK-QFRPPMGGYCIEFPAGLIDDGETPEAAAL 110 I + +++V+ Q +P +G I P G I ET L Sbjct: 191 KQAWATAPYAPTFITTDAVVVQAGHVLMVRRQAKPGLG--LIALPGGFIKQNETLVEGML 248 Query: 111 RELEEETGYKG 121 REL+EET K Sbjct: 249 RELKEETRLKV 259 >1KTG-A nrPDB Length = 138 Score = 36.0 bits (81), Expect = 0.014, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 23/74 (31%), Gaps = 5/74 (6%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSN----CTIHIVTVT 147 P G +D GE AA+RE +EE + ++ Sbjct: 32 WTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAKGKPKSVKYWLAK 91 Query: 148 I-NGDDAENARPKP 160 + N DD + + Sbjct: 92 LNNPDDVQLSHEHQ 105 >4IJX-A nrPDB Length = 155 Score = 35.2 bits (79), Expect = 0.021, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 14/36 (38%) Query: 92 IEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS 127 P G ++ GE ALR +EE G + Sbjct: 38 WTPPKGHVEPGEDDLETALRATQEEAGIEAGQLTII 73 >2B0V-A nrPDB Length = 153 Score = 34.0 bits (76), Expect = 0.050, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%) Query: 68 LQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGY 119 + + + L+ + P + PAG ++ GE+ A RE+ EETG+ Sbjct: 11 VAAVIEQDDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGH 62 >1QVJ-A nrPDB Length = 292 Score = 34.0 bits (76), Expect = 0.051, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 7/99 (7%) Query: 91 CIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTING 150 P G++D GE A RE EE + +H + + Sbjct: 151 EWAIPGGMVDPGEKISATLKREFGEEA------LNSLQKTSAEKREIEEKLHKLFSQDHL 204 Query: 151 DDAENARPKPKPGDGEFVEVISLPKNDLL-QRLDALVAE 188 + P+ D ++E ++ +D + +D L+ E Sbjct: 205 VIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLE 243 >3BHO-A nrPDB Length = 208 Score = 31.7 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 6/57 (10%) Query: 75 ECIVLVKQFRPP------MGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAE 125 E +++V + R P +G + P G ++ GE R + E G + + + Sbjct: 62 EGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQ 118 >2I8U-A nrPDB Length = 167 Score = 31.3 bits (69), Expect = 0.36, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 22/126 (17%) Query: 81 KQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKG--------DIAECSPAVCM 132 + RP G P G + ET EAA R E G + + + Sbjct: 37 RTNRPAQG--YWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNF 94 Query: 133 DPGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDALVAEEHLT 192 ++ + E P + D ++ DAL+A E++ Sbjct: 95 SGTDFTTHYVVLGFRFRVAEEELLLPDEQHDDYRWLTP------------DALLASENVH 142 Query: 193 VDARVY 198 ++RVY Sbjct: 143 ANSRVY 148 >5OPG-A nrPDB Length = 371 Score = 31.0 bits (68), Expect = 0.39, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 1/83 (1%) Query: 5 EPTESSQNGKQYIISEELISEGKWVKLEKTTYMDPTGKTRTWESVKRTTRKEQTADGVAV 64 +P +SSQN + + S E+ +G V K + + Sbjct: 87 DPGQSSQNSFETV-STEVDLKGTCVLKHKMVEESYRSRKSITCYDLSCNSTFCKPTLYMI 145 Query: 65 IPVLQRTLHYECIVLVKQFRPPM 87 +P+ + C++ + +R + Sbjct: 146 VPIHACNMMKSCLIALGPYRVQV 168 >3F1B-A nrPDB Length = 203 Score = 31.0 bits (68), Expect = 0.40, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 10/107 (9%) Query: 95 PAGLIDDGETPEAAALRELEEETGYKG---DIAECSPAVCM---DPGLSNCTIHIVTVTI 148 PAG D G +P R LE G+ G M S + + + Sbjct: 79 PAG--DPGLSPREQLRRALEGFLGFVGKHRKSWMVLYRQAMGQQAFVGSVQSSRDRLIEL 136 Query: 149 NGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLDALVAEEHLTVDA 195 E++ P+P G+ E+I++ + + VA + VDA Sbjct: 137 TAHLLESSTKDPEP--GQDFELIAIALVGAGEAVADRVAGGEIEVDA 181 >5U7F-A nrPDB Length = 150 Score = 30.6 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 17/31 (54%) Query: 91 CIEFPAGLIDDGETPEAAALRELEEETGYKG 121 + G +++GET AA+RE++EE Sbjct: 35 FWQSVTGSVEEGETAPQAAMREVKEEVTIDV 65 >3WEU-A nrPDB Length = 726 Score = 29.8 bits (65), Expect = 0.92, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 3/44 (6%) Query: 101 DGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIV 144 +G TPE E EEETG + A NCTI V Sbjct: 481 NGLTPE---RDECEEETGCEPGDLTKRMACPWQADFFNCTIQTV 521 >5LF8-A nrPDB Length = 328 Score = 29.0 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 75 ECIVLVKQFRP-PMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAECS 127 + ++L ++ R + P G ++ E LREL EE+G + S Sbjct: 104 KTVLLTRRARTLSVSPNLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFS 157 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.303 0.120 0.287 Lambda K H 0.267 0.0368 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,358,297 Number of Sequences: 36641 Number of extensions: 270714 Number of successful extensions: 586 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 496 Number of HSP's gapped (non-prelim): 93 length of query: 219 length of database: 10,336,785 effective HSP length: 93 effective length of query: 126 effective length of database: 6,929,172 effective search space: 873075672 effective search space used: 873075672 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 57 (26.7 bits)