BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9UIV1 (285 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4GMJ-B nrPDB 595 e-171 2D5R-A nrPDB 527 e-150 3G10-A nrPDB 303 7e-83 1UOC-A nrPDB 196 1e-50 4DZY-A nrPDB 28 6.6 4CCY-A nrPDB 27 7.9 4ZNG-C nrPDB 27 8.0 >4GMJ-B nrPDB Length = 285 Score = 595 bits (1535), Expect = e-171, Method: Compositional matrix adjust. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY 60 MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY Sbjct: 1 MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY 60 Query: 61 QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG 120 QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG Sbjct: 61 QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG 120 Query: 121 IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD 180 IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD Sbjct: 121 IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD 180 Query: 181 FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240 FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK Sbjct: 181 FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240 Query: 241 MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS 285 MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS Sbjct: 241 MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS 285 >2D5R-A nrPDB Length = 252 Score = 527 bits (1357), Expect = e-150, Method: Compositional matrix adjust. Identities = 252/252 (100%), Positives = 252/252 (100%) Query: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVD 70 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVD Sbjct: 1 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVD 60 Query: 71 LLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG 130 LLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG Sbjct: 61 LLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG 120 Query: 131 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP 190 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP Sbjct: 121 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP 180 Query: 191 VIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHI 250 VIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHI Sbjct: 181 VIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHI 240 Query: 251 DDAKYCGHLYGL 262 DDAKYCGHLYGL Sbjct: 241 DDAKYCGHLYGL 252 >3G10-A nrPDB Length = 333 Score = 303 bits (775), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 150/270 (55%), Positives = 190/270 (70%), Gaps = 5/270 (1%) Query: 2 PAATVD----HSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSN 57 PA VD I +VW+ NL +EM I +I +Y V+MDTEFPGVVARP+G F+S+ Sbjct: 9 PALGVDGISSQISPIRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSS 68 Query: 58 ADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLT 117 DY YQ LR NVD LKIIQ+GL +E+G P TWQFNF FNL +DMYA +SIELLT Sbjct: 69 DDYHYQTLRANVDSLKIIQIGLALSDEEGNAPVEACTWQFNFTFNLQDDMYAPESIELLT 128 Query: 118 TSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEE 177 SGI FKKH+E GIE FAELL+ SG+VL E V W++FHSGYDF YL+K +T LP E Sbjct: 129 KSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAE 188 Query: 178 ELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMA 237 +F++IL ++FP YD+KY+MKS N GLQ++A+ L++ RIGPQHQAGSD+LLT Sbjct: 189 YEEFYKILCIYFPKNYDIKYIMKSVLNNSKGLQDIADDLQIHRIGPQHQAGSDALLTARI 248 Query: 238 FFKMREMFFEDHIDDAKYCGHLYGLGSGSS 267 FF++R +F+ I D++ LYGLGS S Sbjct: 249 FFEIRSRYFDGSI-DSRMLNQLYGLGSTGS 277 >1UOC-A nrPDB Length = 289 Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 104/270 (38%), Positives = 157/270 (58%), Gaps = 19/270 (7%) Query: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71 + +VW NL E IRQ++ +YN+V++ TEF G +ARPIG FRS DY YQ +R NVD Sbjct: 16 VRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVDF 75 Query: 72 LKIIQLGLTFMNEQGEYPP-GTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG 130 L IQLGL+ + G P G STWQFNF+F+ +++ + +S+ELL SGI F+KHE G Sbjct: 76 LNPIQLGLSLSDANGNKPDNGPSTWQFNFEFDPKKEIMSTESLELLRKSGINFEKHENLG 135 Query: 131 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP 190 I+ F++LLM SG+++ + V W+++H+ YD G+LI IL N ++P + DF + + P Sbjct: 136 IDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMP 195 Query: 191 VIYDVKYLMKSCKNLKG---------------GLQEVAEQLELERIGPQHQAGSDSLLTG 235 YD+ + K + K L +A++L L R G SLL Sbjct: 196 NFYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTTLADELGLPRFSIFTTTGGQSLLML 255 Query: 236 MAFFKMREMF---FEDHIDDAKYCGHLYGL 262 ++F ++ ++ F + D AKY G +YG+ Sbjct: 256 LSFCQLSKLSMHKFPNGTDFAKYQGVIYGI 285 >4DZY-A nrPDB Length = 418 Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 26/126 (20%) Query: 42 EFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKF 101 E P +A I FRS ++ CN +L + +L + + ++PP K Sbjct: 97 ELPVRIAHRIKGFRSLP----FIIGCNPTILHVHELYIRAFQKLTDFPP--------IKD 144 Query: 102 NLTEDMYAQ----------DSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGV 151 E Y Q D + LL + +KH E+ +YF + +TS + G+ Sbjct: 145 QADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLVRYFLDKTLTSRL----GI 200 Query: 152 KWLSFH 157 + L+ H Sbjct: 201 RMLATH 206 >4CCY-A nrPDB Length = 296 Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 243 EMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYE 278 E F H D KY L G SY++ TG++Y+ Sbjct: 156 EAFISFHPDVYKYAAELTGARGAESYIKWITGDSYD 191 >4ZNG-C nrPDB Length = 362 Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 23/87 (26%) Query: 26 KIRQVIRKYNYVAMDTEFPGVVARPIG----EFRSNADY-----------------QYQL 64 +I +++++ AMD PGV A + + + A Y +Y Sbjct: 248 EIHKIVKEAQQAAMDFIKPGVTAHEVDAVARDLITKAGYGEYFNHRLGHGIGMDVHEYPS 307 Query: 65 LRCNVDLLKIIQLGLTFMNEQGEYPPG 91 + DL +IQ G+ F NE G Y PG Sbjct: 308 IVAGNDL--VIQEGMCFSNEPGIYIPG 332 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4GMJ-B nrPDB 500 e-142 3G10-A nrPDB 444 e-125 2D5R-A nrPDB 437 e-123 1UOC-A nrPDB 395 e-111 Sequences not found previously or not previously below threshold: 1FUP-A nrPDB 32 0.46 3D45-A nrPDB 31 0.53 5GYY-A nrPDB 31 0.77 1S0U-A nrPDB 30 0.81 4W5U-B nrPDB 30 0.90 2YBX-A nrPDB 30 1.1 4LM8-A nrPDB 29 1.8 4NQI-A nrPDB 29 2.0 5HZR-A nrPDB 29 2.5 1CG8-B nrPDB 28 3.1 1VDK-A nrPDB 28 3.9 4K6M-A nrPDB 28 4.0 4HDG-A nrPDB 28 4.0 5UB9-A nrPDB 28 5.6 4YB6-A nrPDB 28 5.6 2HX5-A nrPDB 28 5.8 4WR5-A nrPDB 27 8.4 1BXN-A nrPDB 27 8.5 CONVERGED! >4GMJ-B nrPDB Length = 285 Score = 500 bits (1287), Expect = e-142, Method: Composition-based stats. Identities = 285/285 (100%), Positives = 285/285 (100%) Query: 1 MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY 60 MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY Sbjct: 1 MPAATVDHSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADY 60 Query: 61 QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG 120 QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG Sbjct: 61 QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG 120 Query: 121 IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD 180 IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD Sbjct: 121 IQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELD 180 Query: 181 FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240 FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK Sbjct: 181 FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK 240 Query: 241 MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS 285 MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS Sbjct: 241 MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQS 285 >3G10-A nrPDB Length = 333 Score = 444 bits (1142), Expect = e-125, Method: Composition-based stats. Identities = 150/270 (55%), Positives = 190/270 (70%), Gaps = 5/270 (1%) Query: 2 PAATVD----HSQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSN 57 PA VD I +VW+ NL +EM I +I +Y V+MDTEFPGVVARP+G F+S+ Sbjct: 9 PALGVDGISSQISPIRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSS 68 Query: 58 ADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLT 117 DY YQ LR NVD LKIIQ+GL +E+G P TWQFNF FNL +DMYA +SIELLT Sbjct: 69 DDYHYQTLRANVDSLKIIQIGLALSDEEGNAPVEACTWQFNFTFNLQDDMYAPESIELLT 128 Query: 118 TSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEE 177 SGI FKKH+E GIE FAELL+ SG+VL E V W++FHSGYDF YL+K +T LP E Sbjct: 129 KSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAE 188 Query: 178 ELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMA 237 +F++IL ++FP YD+KY+MKS N GLQ++A+ L++ RIGPQHQAGSD+LLT Sbjct: 189 YEEFYKILCIYFPKNYDIKYIMKSVLNNSKGLQDIADDLQIHRIGPQHQAGSDALLTARI 248 Query: 238 FFKMREMFFEDHIDDAKYCGHLYGLGSGSS 267 FF++R +F+ ID ++ LYGLGS S Sbjct: 249 FFEIRSRYFDGSID-SRMLNQLYGLGSTGS 277 >2D5R-A nrPDB Length = 252 Score = 437 bits (1124), Expect = e-123, Method: Composition-based stats. Identities = 252/252 (100%), Positives = 252/252 (100%) Query: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVD 70 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVD Sbjct: 1 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVD 60 Query: 71 LLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG 130 LLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG Sbjct: 61 LLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG 120 Query: 131 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP 190 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP Sbjct: 121 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP 180 Query: 191 VIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHI 250 VIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHI Sbjct: 181 VIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHI 240 Query: 251 DDAKYCGHLYGL 262 DDAKYCGHLYGL Sbjct: 241 DDAKYCGHLYGL 252 >1UOC-A nrPDB Length = 289 Score = 395 bits (1016), Expect = e-111, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 157/270 (58%), Gaps = 19/270 (7%) Query: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71 + +VW NL E IRQ++ +YN+V++ TEF G +ARPIG FRS DY YQ +R NVD Sbjct: 16 VRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVDF 75 Query: 72 LKIIQLGLTFMNEQGEYPP-GTSTWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEG 130 L IQLGL+ + G P G STWQFNF+F+ +++ + +S+ELL SGI F+KHE G Sbjct: 76 LNPIQLGLSLSDANGNKPDNGPSTWQFNFEFDPKKEIMSTESLELLRKSGINFEKHENLG 135 Query: 131 IETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFP 190 I+ F++LLM SG+++ + V W+++H+ YD G+LI IL N ++P + DF + + P Sbjct: 136 IDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMP 195 Query: 191 VIYDVKYLMKSCKNLKG---------------GLQEVAEQLELERIGPQHQAGSDSLLTG 235 YD+ + K + K L +A++L L R G SLL Sbjct: 196 NFYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTTLADELGLPRFSIFTTTGGQSLLML 255 Query: 236 MAFFKMREMF---FEDHIDDAKYCGHLYGL 262 ++F ++ ++ F + D AKY G +YG+ Sbjct: 256 LSFCQLSKLSMHKFPNGTDFAKYQGVIYGI 285 >1FUP-A nrPDB Length = 472 Score = 31.6 bits (70), Expect = 0.46, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 7/68 (10%) Query: 98 NFKFNLTEDMYAQ---DSIELLTTSGIQFKKHEEEGIET-QYFAELLMTSGVVLCEGVKW 153 NF+ N+ M S+ LL F KH GIE + L+ ++L V Sbjct: 355 NFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLML---VTA 411 Query: 154 LSFHSGYD 161 L+ H GYD Sbjct: 412 LNTHIGYD 419 >3D45-A nrPDB Length = 507 Score = 31.2 bits (69), Expect = 0.53, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 16/126 (12%) Query: 14 EVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGE-----FRSNADYQYQLLRCN 68 E+ N + K+ Q I + ++ A+D EF G+ P F + + +L + + Sbjct: 4 EIIRSNFKINLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTSGFDTPEERYQKLKKHS 63 Query: 69 VDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT---------EDMYAQDSIELLTTS 119 +D L + Q GL T FNF + + SI+ L + Sbjct: 64 MDFL-LFQFGLCAFKYD-HTDSKHVTKSFNFYVFPKPFSRSSPDVKFVCQSSSIDFLASQ 121 Query: 120 GIQFKK 125 G F K Sbjct: 122 GFDFNK 127 Score = 29.2 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 24/92 (26%) Query: 173 NLPEEELDFFEILRLFFPVIYDVKYL-----MKSCKNLKGGLQEVAEQLELERIGP---- 223 LP + +F E+ FP + D K + K N L E+ ++L+ P Sbjct: 298 PLPADLNEFKEMAICVFPRLLDTKLMASTQPFKDIINNT-SLAELEKRLKETPFDPPKVE 356 Query: 224 --------------QHQAGSDSLLTGMAFFKM 241 H+AG D+ +TG+ F M Sbjct: 357 SAEGFPSYDTASEQLHEAGYDAYITGLCFISM 388 >5GYY-A nrPDB Length = 405 Score = 30.8 bits (68), Expect = 0.77, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 24/151 (15%) Query: 1 MPAATVDHSQRICEVWACNLDEE---MKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSN 57 M +DHS VW+ NL E + +++ N+V D P G + Sbjct: 77 MNLVLLDHSN--KSVWSTNLTRENVRSPVVAELLANGNFVVRD---------PSGFLWQS 125 Query: 58 ADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTE---DMYAQDSIE 114 DY L + L ++ GL S+ F++K ++ + Y Sbjct: 126 FDYPTDTLLPEMKLGYDLKTGLNRFLVSWRSSDDPSSGDFSYKLDIQRGLPEFYTFKDNT 185 Query: 115 LLTTS----GIQFK---KHEEEGIETQYFAE 138 L+ + GI+F + ++ F E Sbjct: 186 LVHRTGPWNGIRFSGIPEEQQLSYMVYNFTE 216 >1S0U-A nrPDB Length = 408 Score = 30.4 bits (67), Expect = 0.81, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 154 LSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQ--- 210 +S H + L+K + +P + D R++ +D+ K+LKGG+ Sbjct: 177 ISAHHEANIDVLLKAI-QDFIPTPKRDPDATPRMYVARSFDINKPGTEIKDLKGGVLGGA 235 Query: 211 ------EVAEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGS 264 +V +++E+ R G + G+ + + K+ + + I + G L G+G+ Sbjct: 236 IIQGVFKVGDEIEI-RPGIKVTEGNKTFWKPLT-TKIVSLAAGNTILRKAHPGGLIGVGT 293 Query: 265 G 265 Sbjct: 294 T 294 >4W5U-B nrPDB Length = 408 Score = 30.4 bits (67), Expect = 0.90, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 3 AATVDHS-QRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPG 45 A T D S + W L ++RQ+ KY ++ + F G Sbjct: 98 AFTADQSVSGQADTWDQPLRGNFNQLRQLKAKYPHIKVLWSFGG 141 >2YBX-A nrPDB Length = 394 Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%) Query: 127 EEEGIETQYFAELLMTSGVVLCEGV--KWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184 E GI+ Q F L S + + FH+ YD Y+IK +T+ ++ E + + Sbjct: 92 ERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDV-AEMHNILKK 150 Query: 185 LRLFFPVIYDVKYL 198 + + + L Sbjct: 151 YHQYIVECHGITLL 164 >4LM8-A nrPDB Length = 700 Score = 29.2 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 2/77 (2%) Query: 201 SCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE--MFFEDHIDDAKYCGH 258 S + L + +V+ + + +D + G+A ++++ + + Sbjct: 44 SIQTLNLDITKVSYENGAPMVTVFATNEADMPVIGLANLEIKKALQLIPEGATGPGNSAN 103 Query: 259 LYGLGSGSSYVQNGTGN 275 GLGS SYV N G+ Sbjct: 104 WQGLGSSKSYVDNKNGS 120 >4NQI-A nrPDB Length = 264 Score = 29.2 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 4/77 (5%) Query: 144 GVVLCEGVKWLSFHSGYDFGYLIKILTNS--NLPEEELDFFEILRLFF--PVIYDVKYLM 199 G+VL + + L+ H+G DFG K L ++ +L D ++L F P ++ Sbjct: 56 GLVLADTLTRLTIHNGGDFGEGFKKLADAIKDLENRRDDVAKVLLNEFITPNKQAIEDDQ 115 Query: 200 KSCKNLKGGLQEVAEQL 216 K+ + ++ +Q+ Sbjct: 116 KAIATFEKNYKKDRDQM 132 >5HZR-A nrPDB Length = 732 Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 27/118 (22%) Query: 101 FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCE-----GVKWLS 155 +NL D +A +++ +K ++E I F LL T ++ + +KW Sbjct: 174 WNLEFDKWAPSVAKVVYKGPPNARKMQQEKIRQGKFQVLLTTYEYIIKDRPLLSKIKW-- 231 Query: 156 FHSGYDFGYLIK--------------------ILTNSNLPEEELDFFEILRLFFPVIY 193 FH D G+ +K ILT + L + + +L P I+ Sbjct: 232 FHMIIDEGHRMKNANSKLSATIQQYYSTRFRLILTGTPLQNNLAELWAMLNFVLPNIF 289 >1CG8-B nrPDB Length = 141 Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 4/33 (12%) Query: 111 DSIELLTTSGIQFK----KHEEEGIETQYFAEL 139 ++I+ L I F+ KH+E G++TQ F L Sbjct: 69 EAIDDLKKVEINFQNLSGKHQEIGVDTQNFKLL 101 >1VDK-A nrPDB Length = 466 Score = 28.5 bits (62), Expect = 3.9, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 96 QFNFKFNLTEDMYAQ---DSIELLTTSGIQFKKHEEEGIET 133 Q NF+ N+ + + A +SI LL + F H +GIE Sbjct: 353 QGNFQLNVYKPVMAYSTLESINLLADAVASFDAHLAQGIEP 393 >4K6M-A nrPDB Length = 915 Score = 28.5 bits (62), Expect = 4.0, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 16/34 (47%) Query: 10 QRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEF 43 R WA N+ + ++R VI K NYV T Sbjct: 858 TRSRATWAENIYAAINQVRAVIGKENYVDYMTSL 891 >4HDG-A nrPDB Length = 639 Score = 28.5 bits (62), Expect = 4.0, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 16/34 (47%) Query: 10 QRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEF 43 R WA N+ + ++R VI K NYV T Sbjct: 592 TRSRATWAENIYAAINQVRAVIGKENYVDYMTSL 625 >5UB9-A nrPDB Length = 226 Score = 27.7 bits (60), Expect = 5.6, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 108 YAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYL 165 +++SIELL+ G++ HE+ I + L + V + + L F D G + Sbjct: 18 LSKESIELLSECGVKMHIHEQSLI--AFSTNLPIDILRVRDDDIPGLIFDGVVDLGII 73 >4YB6-A nrPDB Length = 300 Score = 27.7 bits (60), Expect = 5.6, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Query: 108 YAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYL 165 +++SIELL+ G++ HE+ I + L + V + + L F D G + Sbjct: 18 LSKESIELLSECGVKMHIHEQSLI--AFSTNLPIDILRVRDDDIPGLIFDGVVDLGII 73 >2HX5-A nrPDB Length = 152 Score = 27.7 bits (60), Expect = 5.8, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 19/46 (41%) Query: 64 LLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYA 109 ++ C D + I G E +++Q +F+F E + A Sbjct: 69 IIHCQADFRRPIHTGDALAMELRPERLNPNSFQVHFEFRCEEQIAA 114 >4WR5-A nrPDB Length = 244 Score = 27.3 bits (59), Expect = 8.4, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 8/91 (8%) Query: 98 NFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLC--EGVKWLS 155 N + + D+ S+ ++ KH G + AE+ M G VL GV ++ Sbjct: 78 NLPYXIDGDVKLTQSMAIIRXIA---DKHNMLGGCPKERAEISMLEGAVLDIRYGVSRIA 134 Query: 156 FHSGYDFGYLIKILTNSNLPEEELDFFEILR 186 + ++ +K+ S LPE F + L Sbjct: 135 YSKDFE---TLKVDFLSKLPEMLKMFEDRLC 162 >1BXN-A nrPDB Length = 485 Score = 27.3 bits (59), Expect = 8.5, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 12/103 (11%) Query: 108 YAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIK 167 Y +LL F+ ++G++ A + V W + D Y K Sbjct: 31 YVPKDTDLLAL----FRITPQDGVDPVEAAAAVAGESSTATWTVVWTDRLTACDM-YRAK 85 Query: 168 ILTNSNLPEEELDFFEILRLFFPVIYDVKYLMK-SCKNLKGGL 209 +P FF + YD+ + S NL + Sbjct: 86 AYRVDPVPNNPEQFFCYVA------YDLSLFEEGSIANLTASI 122 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.136 0.372 Lambda K H 0.267 0.0418 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,721,649 Number of Sequences: 36641 Number of extensions: 484899 Number of successful extensions: 1121 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 1098 Number of HSP's gapped (non-prelim): 37 length of query: 285 length of database: 10,336,785 effective HSP length: 96 effective length of query: 189 effective length of database: 6,819,249 effective search space: 1288838061 effective search space used: 1288838061 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.3 bits)