BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9UIC8
         (334 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3IEI-A nrPDB                                                          687   0.0  
3O7W-A nrPDB                                                          588   e-169
1RJD-A nrPDB                                                          114   5e-26
2ZZK-A nrPDB                                                           96   2e-20
5VEU-A nrPDB                                                           28   3.8  
2ZI8-A nrPDB                                                           28   4.0  
5OLJ-A nrPDB                                                           28   4.4  

>3IEI-A nrPDB
          Length = 334

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/334 (98%), Positives = 331/334 (99%)

Query: 1   MATRQRESSITSCCSTSSCDADDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKE 60
           MATRQRESSITSCCSTSS D +DEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKE
Sbjct: 1   MATRQRESSITSCCSTSSMDENDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKE 60

Query: 61  RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFE 120
           RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLL SKYFE
Sbjct: 61  RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFE 120

Query: 121 VDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEE 180
           VDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEE
Sbjct: 121 VDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEE 180

Query: 181 KLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQI 240
           KLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQI
Sbjct: 181 KLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQI 240

Query: 241 MIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLE 300
           MIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLE
Sbjct: 241 MIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLE 300

Query: 301 FLDEMELLEQLMRHYCLCWATKGGNELGLKEITY 334
           FLDEMELLEQLMRHYCLCWATKGGNELGLKEITY
Sbjct: 301 FLDEMELLEQLMRHYCLCWATKGGNELGLKEITY 334


>3O7W-A nrPDB
          Length = 294

 Score =  588 bits (1517), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 288/318 (90%), Positives = 290/318 (91%), Gaps = 24/318 (7%)

Query: 17  SSCDADDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 76
            + D +DEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG
Sbjct: 1   GAMDENDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 60

Query: 77  VSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKC 136
           VSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKC
Sbjct: 61  VSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKC 120

Query: 137 KPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLI 196
           KPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLI
Sbjct: 121 KPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLI 180

Query: 197 AECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGVE 256
           AECVLVYMTPEQSANLLKWAANSFERAMFINYEQVN G                      
Sbjct: 181 AECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNEG---------------------- 218

Query: 257 TCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYC 316
             KSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYC
Sbjct: 219 --KSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYC 276

Query: 317 LCWATKGGNELGLKEITY 334
           LCWATKGGNELGLKEITY
Sbjct: 277 LCWATKGGNELGLKEITY 294


>1RJD-A nrPDB
          Length = 334

 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 49/333 (14%)

Query: 26  VRGTCEDASLCKRFAVSIGY-------------------WHDPYI--------QHFVRLS 58
           ++ T  DA  CK  A+S+GY                   WH  Y+        + F ++ 
Sbjct: 5   IQQTDYDALSCKLAAISVGYLPSSGLQRLSVDLSKKYTEWHRSYLITLKKFSRRAFGKVD 64

Query: 59  KERKA--PEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPS 116
           K  ++  P +N G + R  G+   I  FL   E   Q+VNLG G D     L    + P 
Sbjct: 65  KAMRSSFPVMNYGTYLRTVGIDAAILEFLVANE-KVQVVNLGCGSDLRMLPLLQ--MFPH 121

Query: 117 -KYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDL 175
             Y ++D+   V  K +SI  +  +    L L  EDT +    ++D  RY +   DL D+
Sbjct: 122 LAYVDIDYNESVELK-NSILRESEILRISLGLSKEDTAK-SPFLIDQGRYKLAACDLNDI 179

Query: 176 SELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVN--- 232
           +E    L  C    ++PT++I+EC+L YM   +S  L+    + F   ++I+Y+ +    
Sbjct: 180 TETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQ 238

Query: 233 MGDRFGQIMIENLRR-RQCDLAGVETCKSLESQKERLLSNGWETASAV---DMMELYN-R 287
             DRFG IM  NL+  R  ++  + T  S E    R     W  A  V   DM E++N +
Sbjct: 239 PNDRFGAIMQSNLKESRNLEMPTLMTYNSKEKYASR-----WSAAPNVIVNDMWEIFNAQ 293

Query: 288 LPRAEVSRIESLEFLDEMELLEQLMRHYCLCWA 320
           +P +E  R+ SL+FLDE+E L+ +  HY L  A
Sbjct: 294 IPESERKRLRSLQFLDELEELKVMQTHYILMKA 326


>2ZZK-A nrPDB
          Length = 695

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 20/288 (6%)

Query: 50  YIQHFVRLSKERKAPEINRGYFARVHGVSQLIKAFLRKT--ECHCQIVNLGAGMDTTFWR 107
           Y + FV   K +++P INRGY+ R+  +   + + + +T  +    +VNLG G D   ++
Sbjct: 66  YFKFFVP-KKIKRSPCINRGYWLRLFAIRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQ 124

Query: 108 LKDEDLLPSK-------YFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHIL 160
           L D + + S+       + ++D+  ++  K+  IK  P LS  I+ L SED   +D   +
Sbjct: 125 LLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSK-IIGL-SEDKDYVDDSNV 182

Query: 161 D---SKRYAVIGADLRDLSELEEKLKKCNM-NTQLPTLLIAECVLVYMTPEQSANLLKWA 216
           D   + +Y     DL D       L +C + +  +  + +AE  L YM PE+S ++++ A
Sbjct: 183 DFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIE-A 241

Query: 217 ANSFERAMFINYEQV---NMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGW 273
            +  E + FI  EQ+      + F + M+ + +R    L  V    ++ESQ +R    G+
Sbjct: 242 TSKMENSHFIILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGF 301

Query: 274 ETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYCLCWAT 321
              +  DM +L+     A    +  +E  DE+E       HY LC AT
Sbjct: 302 AYVNVGDMFQLWESADEATKKELLKVEPFDELEEFHLFCHHYVLCHAT 349


>5VEU-A nrPDB
          Length = 480

 Score = 28.5 bits (62), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 196 IAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGV 255
           + E + V + P+ + N L  + N  +++  +N +Q +  D F Q+MI++   ++ +    
Sbjct: 211 VFEALNVSLFPKDTINFLSKSVNRMKKSR-LNDKQKHRLD-FLQLMIDSQNSKETESHKA 268

Query: 256 ETCKSLESQKERLLSNGWETASAVDMMELY 285
            +   L +Q    +  G+ET S+V    LY
Sbjct: 269 LSDLELAAQSIIFIFAGYETTSSVLSFTLY 298


>2ZI8-A nrPDB
          Length = 300

 Score = 28.5 bits (62), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 261 LESQKERLLSNGWETASAVDMMELYNRL 288
           +  + +RLL  GWE A+A  + E+ NRL
Sbjct: 54  VPGEHDRLLEAGWECANAEGLQEIRNRL 81


>5OLJ-A nrPDB
          Length = 723

 Score = 28.5 bits (62), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 15/105 (14%)

Query: 81  IKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPL 140
           +KA+ R       I+   + ++   W +K  D  PS+++    P+++      ++   P 
Sbjct: 467 LKAY-RYNPKEFTIIKTQSALELNAWIVKPIDFDPSRHY----PVLM------VQYSGPN 515

Query: 141 SSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKC 185
           S  +L+ +S D      H L SK Y V   D R      E+ +KC
Sbjct: 516 SQQVLDRYSFDW----EHYLASKGYVVACVDGRGTGARGEEWRKC 556


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3IEI-A nrPDB                                                          576   e-165
3O7W-A nrPDB                                                          500   e-142
2ZZK-A nrPDB                                                          360   e-100
1RJD-A nrPDB                                                          349   1e-96

Sequences not found previously or not previously below threshold:

6ID1-V nrPDB                                                           32   0.43 
5XDR-A nrPDB                                                           32   0.45 
5ESY-A nrPDB                                                           31   0.78 
2I9U-A nrPDB                                                           31   0.85 
1N7G-A nrPDB                                                           30   1.2  
5K36-J nrPDB                                                           30   1.8  
6FSZ-KK nrPDB                                                          30   1.8  
1PG5-A nrPDB                                                           29   3.8  
5M6U-B nrPDB                                                           29   4.0  
3LM8-A nrPDB                                                           27   9.1  


CONVERGED!
>3IEI-A nrPDB
          Length = 334

 Score =  576 bits (1485), Expect = e-165,   Method: Composition-based stats.
 Identities = 330/334 (98%), Positives = 331/334 (99%)

Query: 1   MATRQRESSITSCCSTSSCDADDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKE 60
           MATRQRESSITSCCSTSS D +DEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKE
Sbjct: 1   MATRQRESSITSCCSTSSMDENDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKE 60

Query: 61  RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFE 120
           RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLL SKYFE
Sbjct: 61  RKAPEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFE 120

Query: 121 VDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEE 180
           VDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEE
Sbjct: 121 VDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEE 180

Query: 181 KLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQI 240
           KLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQI
Sbjct: 181 KLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQI 240

Query: 241 MIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLE 300
           MIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLE
Sbjct: 241 MIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLE 300

Query: 301 FLDEMELLEQLMRHYCLCWATKGGNELGLKEITY 334
           FLDEMELLEQLMRHYCLCWATKGGNELGLKEITY
Sbjct: 301 FLDEMELLEQLMRHYCLCWATKGGNELGLKEITY 334


>3O7W-A nrPDB
          Length = 294

 Score =  500 bits (1287), Expect = e-142,   Method: Composition-based stats.
 Identities = 288/318 (90%), Positives = 290/318 (91%), Gaps = 24/318 (7%)

Query: 17  SSCDADDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 76
            + D +DEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG
Sbjct: 1   GAMDENDEGVRGTCEDASLCKRFAVSIGYWHDPYIQHFVRLSKERKAPEINRGYFARVHG 60

Query: 77  VSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKC 136
           VSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKC
Sbjct: 61  VSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPSKYFEVDFPMIVTRKLHSIKC 120

Query: 137 KPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLI 196
           KPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLI
Sbjct: 121 KPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLI 180

Query: 197 AECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGVE 256
           AECVLVYMTPEQSANLLKWAANSFERAMFINYEQVN G                      
Sbjct: 181 AECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNEG---------------------- 218

Query: 257 TCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYC 316
             KSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYC
Sbjct: 219 --KSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYC 276

Query: 317 LCWATKGGNELGLKEITY 334
           LCWATKGGNELGLKEITY
Sbjct: 277 LCWATKGGNELGLKEITY 294


>2ZZK-A nrPDB
          Length = 695

 Score =  360 bits (923), Expect = e-100,   Method: Composition-based stats.
 Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 20/288 (6%)

Query: 50  YIQHFVRLSKERKAPEINRGYFARVHGVSQLIKAFLRKT--ECHCQIVNLGAGMDTTFWR 107
           Y + FV   K +++P INRGY+ R+  +   + + + +T  +    +VNLG G D   ++
Sbjct: 66  YFKFFVP-KKIKRSPCINRGYWLRLFAIRSRLNSIIEQTPQDKKIVVVNLGCGYDPLPFQ 124

Query: 108 LKDEDLLPSK-------YFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHIL 160
           L D + + S+       + ++D+  ++  K+  IK  P LS  I+ L SED   +D   +
Sbjct: 125 LLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSK-IIGL-SEDKDYVDDSNV 182

Query: 161 D---SKRYAVIGADLRDLSELEEKLKKCNM-NTQLPTLLIAECVLVYMTPEQSANLLKWA 216
           D   + +Y     DL D       L +C + +  +  + +AE  L YM PE+S ++++ A
Sbjct: 183 DFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIE-A 241

Query: 217 ANSFERAMFINYEQV---NMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGW 273
            +  E + FI  EQ+      + F + M+ + +R    L  V    ++ESQ +R    G+
Sbjct: 242 TSKMENSHFIILEQLIPKGPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGF 301

Query: 274 ETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYCLCWAT 321
              +  DM +L+     A    +  +E  DE+E       HY LC AT
Sbjct: 302 AYVNVGDMFQLWESADEATKKELLKVEPFDELEEFHLFCHHYVLCHAT 349


>1RJD-A nrPDB
          Length = 334

 Score =  349 bits (895), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 49/333 (14%)

Query: 26  VRGTCEDASLCKRFAVSIGY-------------------WHDPYI--------QHFVRLS 58
           ++ T  DA  CK  A+S+GY                   WH  Y+        + F ++ 
Sbjct: 5   IQQTDYDALSCKLAAISVGYLPSSGLQRLSVDLSKKYTEWHRSYLITLKKFSRRAFGKVD 64

Query: 59  KERKA--PEINRGYFARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLPS 116
           K  ++  P +N G + R  G+   I  FL   E   Q+VNLG G D     L    + P 
Sbjct: 65  KAMRSSFPVMNYGTYLRTVGIDAAILEFLVANE-KVQVVNLGCGSDLRMLPLLQ--MFPH 121

Query: 117 -KYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGADLRDL 175
             Y ++D+   V  K +SI  +  +    L L  EDT +    ++D  RY +   DL D+
Sbjct: 122 LAYVDIDYNESVELK-NSILRESEILRISLGLSKEDTAK-SPFLIDQGRYKLAACDLNDI 179

Query: 176 SELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVN--- 232
           +E    L  C    ++PT++I+EC+L YM   +S  L+    + F   ++I+Y+ +    
Sbjct: 180 TETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQ 238

Query: 233 MGDRFGQIMIENLRR-RQCDLAGVETCKSLESQKERLLSNGWETASAV---DMMELYN-R 287
             DRFG IM  NL+  R  ++  + T  S E    R     W  A  V   DM E++N +
Sbjct: 239 PNDRFGAIMQSNLKESRNLEMPTLMTYNSKEKYASR-----WSAAPNVIVNDMWEIFNAQ 293

Query: 288 LPRAEVSRIESLEFLDEMELLEQLMRHYCLCWA 320
           +P +E  R+ SL+FLDE+E L+ +  HY L  A
Sbjct: 294 IPESERKRLRSLQFLDELEELKVMQTHYILMKA 326


>6ID1-V nrPDB
          Length = 795

 Score = 31.6 bits (70), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 106 WRLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHIL----D 161
           +RL  E    ++  +  +P I+   L S+  +         +H +         L    +
Sbjct: 482 FRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE 541

Query: 162 SKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAEC 199
              Y     D  DL+EL   + +  ++ QL  ++IA C
Sbjct: 542 LLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 579


>5XDR-A nrPDB
          Length = 690

 Score = 31.6 bits (70), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 106 WRLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHIL----D 161
           +RL  E    ++  +  +P I+   L S+  +         +H +         L    +
Sbjct: 377 FRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE 436

Query: 162 SKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAEC 199
              Y     D  DL+EL   + +  ++ QL  ++IA C
Sbjct: 437 LLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC 474


>5ESY-A nrPDB
          Length = 346

 Score = 30.9 bits (68), Expect = 0.78,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 1/94 (1%)

Query: 238 GQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNRLPRAEVSRIE 297
           G++++  L      LA +      +S  + +    + T  +   M+L +        ++ 
Sbjct: 158 GKVVLGVLACPNLPLASIAGNNKNKSSSDEIGCLFFATIGSGTYMQLLDSKSSPVKVQVS 217

Query: 298 SLEFLDEMELLEQLM-RHYCLCWATKGGNELGLK 330
           S+E  +E    E     H     ++   N+LG+K
Sbjct: 218 SVENPEEASFFESFEGAHSLHDLSSSIANKLGVK 251


>2I9U-A nrPDB
          Length = 439

 Score = 30.9 bits (68), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 93  QIVNLGAGMDTTFWRLKDEDLLP--SKYFEVDFPMIVTRKL--HSIKCKPPLSSPILELH 148
           Q  NLG GMD       +    P  +K+  VD+      +L    IK      +    LH
Sbjct: 78  QYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLH 137

Query: 149 SEDTLQMDGHILDSK 163
            + T+++   ++ S 
Sbjct: 138 KDSTIELFNMLIKSG 152


>1N7G-A nrPDB
          Length = 381

 Score = 30.1 bits (66), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 9/95 (9%)

Query: 154 QMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLL 213
            +D H ++     +  ADL D S L   +     +        +   + +  P+ +A+++
Sbjct: 74  YIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVV 133

Query: 214 KWAA---------NSFERAMFINYEQVNMGDRFGQ 239
              A         ++ +    + Y Q    + FG 
Sbjct: 134 ATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS 168


>5K36-J nrPDB
          Length = 559

 Score = 29.7 bits (65), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 113 LLPSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKR 164
            L    FE++ P++V  KL  IK   P S+P    HS +   +D  ++  K+
Sbjct: 487 NLEDIIFEIEKPLVVPVKLEEIKTVDPASAPN---HSPEIDNLDDLVVLKKK 535


>6FSZ-KK nrPDB
          Length = 733

 Score = 29.7 bits (65), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 113 LLPSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKR 164
            L    FE++ P++V  KL  IK   P S+P    HS +   +D  ++  K+
Sbjct: 612 NLEDIIFEIEKPLVVPVKLEEIKTVDPASAPN---HSPEIDNLDDLVVLKKK 660


>1PG5-A nrPDB
          Length = 299

 Score = 28.6 bits (62), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 2/104 (1%)

Query: 205 TPEQSANLLKWAANSFERAMFINYEQVN--MGDRFGQIMIENLRRRQCDLAGVETCKSLE 262
            P Q+   +      F     + +  +      R    ++  L R +  L  + + + L 
Sbjct: 129 HPTQAVIDIYTINKHFNTIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLR 188

Query: 263 SQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEME 306
           ++KE L    +      +  E+ N +    V+RI+   F+DEME
Sbjct: 189 ARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKERFVDEME 232


>5M6U-B nrPDB
          Length = 724

 Score = 28.6 bits (62), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 3/122 (2%)

Query: 203 YMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMIENLRRRQCDLAGVETCKSLE 262
           Y    Q   + + A  +F   + I  EQ    +R+ +  IE  +R   +        + E
Sbjct: 470 YTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNETEIQRIMHNYE 529

Query: 263 SQKERLLSNGWETASAVDMMELYNRLPRAEVSRIESLEFLDEMELLEQLMRHYCLCWATK 322
             K R+           + ++      R    R+ S++   ++  L +    Y L W T+
Sbjct: 530 KLKSRISEIVDSRRRLEEDLKKQAAEYREIDKRMNSIKP--DLIQLRKTRDQY-LMWLTQ 586

Query: 323 GG 324
            G
Sbjct: 587 KG 588


>3LM8-A nrPDB
          Length = 222

 Score = 27.4 bits (59), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 12/77 (15%)

Query: 221 ERAMFINYE------------QVNMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERL 268
           E  ++I  +             V     F  I  +  RR +     +   ++ + Q +  
Sbjct: 24  EHTLWIGVDKGTVTLLDAGIIPVEAFGDFDSITEQERRRIEKAAPALHVYQAEKDQTDLD 83

Query: 269 LSNGWETASAVDMMELY 285
           L+  W      D+++++
Sbjct: 84  LALDWALEKQPDIIQIF 100


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.309    0.128    0.337 

Lambda     K      H
   0.267   0.0398    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,500,280
Number of Sequences: 36641
Number of extensions: 411057
Number of successful extensions: 1123
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1086
Number of HSP's gapped (non-prelim): 25
length of query: 334
length of database: 10,336,785
effective HSP length: 98
effective length of query: 236
effective length of database: 6,745,967
effective search space: 1592048212
effective search space used: 1592048212
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 59 (27.4 bits)