BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9UHL4
         (492 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3N0T-A nrPDB                                                          957   0.0  
3N2Z-B nrPDB                                                          374   e-104
2FWM-X nrPDB                                                           31   1.1  
3WYD-A nrPDB                                                           31   1.2  
2X9J-A nrPDB                                                           30   1.8  
5X6S-A nrPDB                                                           30   2.1  
4MCA-A nrPDB                                                           30   2.4  
3UVA-A nrPDB                                                           30   2.5  
4AXH-A nrPDB                                                           30   2.7  
6BJE-A nrPDB                                                           29   4.2  
2RON-A nrPDB                                                           28   7.6  
3O0X-A nrPDB                                                           28   9.8  

>3N0T-A nrPDB
          Length = 469

 Score =  957 bits (2475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/465 (100%), Positives = 465/465 (100%)

Query: 28  DPGFQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANN 87
           DPGFQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANN
Sbjct: 5   DPGFQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANN 64

Query: 88  SAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 147
           SAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR
Sbjct: 65  SAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 124

Query: 148 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTA 207
           DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTA
Sbjct: 125 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTA 184

Query: 208 DFEGQSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFT 267
           DFEGQSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFT
Sbjct: 185 DFEGQSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFT 244

Query: 268 VLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLVYNASGSEHCYDIYR 327
           VLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLVYNASGSEHCYDIYR
Sbjct: 245 VLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLVYNASGSEHCYDIYR 304

Query: 328 LYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWG 387
           LYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWG
Sbjct: 305 LYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWG 364

Query: 388 VWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDL 447
           VWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDL
Sbjct: 365 VWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDL 424

Query: 448 RASHPEDPASVVEARKLEATIIGEWVKAARREQQPALRGGPRLSL 492
           RASHPEDPASVVEARKLEATIIGEWVKAARREQQPALRGGPRLSL
Sbjct: 425 RASHPEDPASVVEARKLEATIIGEWVKAARREQQPALRGGPRLSL 469


>3N2Z-B nrPDB
          Length = 446

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/449 (43%), Positives = 272/449 (60%), Gaps = 23/449 (5%)

Query: 35  FFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANNSAFVAEL 94
           +FQQ++DHF F     KTF QR+LV+D++W +  G I FYTGNEGD+  F NN+ F+ ++
Sbjct: 7   YFQQKVDHFGFNTV--KTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDV 64

Query: 95  AAERGALLVFAEHRYYGKSLPFGAQSTQRG-HTELLTVEQALADFAELLRALRRDL-GAQ 152
           A E  A+LVFAEHRYYG+SLPFG  S +   H   LT EQALADFAEL++ L+R + GA+
Sbjct: 65  AEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAE 124

Query: 153 DAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFEGQ 212
           + P IA GGSYGGML+A+ RMKYPH+V GALAASAP+     L     F + VT DF   
Sbjct: 125 NQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKS 184

Query: 213 SPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGT---CQPLSDEKDLTQLFMFARNAFTVL 269
            P C++ +  ++  I  L   G+   ++W  G    C PL+ + D+  L  +    +  L
Sbjct: 185 GPHCSESIHRSWDAINRLSNTGS--GLQWLTGALHLCSPLTSQ-DIQHLKDWISETWVNL 241

Query: 270 AMMDYPYPTDFLGPLPANPVKVGCDRL----LSEAQRITGLRALAGLVYNASGSEHCYDI 325
           AM+DYPY ++FL PLPA P+KV C  L    +S++  +  +     + YN SG   C +I
Sbjct: 242 AMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNI 301

Query: 326 YRLYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDT 385
                S     G         W YQACTE+ + F +N V DMF    +  +     C   
Sbjct: 302 SETATSSLGTLG---------WSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQ 352

Query: 386 WGVWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHL 445
           WGV PRP W+ T + G ++ + +NI+FSNG LDPW+GGG+ ++++ +++AVTI  GAHHL
Sbjct: 353 WGVRPRPSWITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHL 412

Query: 446 DLRASHPEDPASVVEARKLEATIIGEWVK 474
           DLR  +  DP SV+ AR LE   +  W++
Sbjct: 413 DLRTKNALDPMSVLLARSLEVRHMKNWIR 441


>2FWM-X nrPDB
          Length = 250

 Score = 31.2 bits (69), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 274 YPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLV 313
           YP+ T+ +    A  V   C RLL+E +R+  L   AG++
Sbjct: 46  YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGIL 85


>3WYD-A nrPDB
          Length = 228

 Score = 31.2 bits (69), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 97  ERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPA 156
           +RGA ++ AE+R Y  + P G Q         + V  A  D  +++  +RRD        
Sbjct: 58  QRGAFMIEAENRGYIVACPKGRQPAS------MYVGPAERDVMDVIAEVRRDYKIDPDRI 111

Query: 157 IAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 189
              G S GG  +  + M +P +     AA APV
Sbjct: 112 YMTGHSMGGYGTWSIAMNHPDV----FAALAPV 140


>2X9J-A nrPDB
          Length = 233

 Score = 30.4 bits (67), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 20/40 (50%)

Query: 420 WAGGGIRRNLSASVIAVTIQGGAHHLDLRASHPEDPASVV 459
           W GG + ++   + +   I+ G H L  R +H  DP S +
Sbjct: 47  WDGGNVTKDGGDAKLTANIRTGEHFLKAREAHIVDPNSDI 86


>5X6S-A nrPDB
          Length = 275

 Score = 30.0 bits (66), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 18/130 (13%)

Query: 92  AELAAERGALLVFAEHRYYGKSLPFGAQST--QRGHTELLTVEQALADFAELLRALRRDL 149
           A L+ + G ++++    Y G      +Q+T    G     ++       A ++       
Sbjct: 54  ATLSEQYGFIVIYPSSPYSGGCWDVSSQATLTHNGGGNSNSI-------ANMVTWTISKY 106

Query: 150 GAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADF 209
           GA  +     G S G M++  +   YP L A A   S         G S   F   T   
Sbjct: 107 GADSSKVFVTGSSSGAMMTNVMAATYPELFAAATVYS---------GVSAGCFYSNTNQV 157

Query: 210 EGQSPKCTQG 219
           +G +  C QG
Sbjct: 158 DGWNSTCAQG 167


>4MCA-A nrPDB
          Length = 367

 Score = 30.0 bits (66), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 129 LTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYG--GMLSAYLRM-KYPHLVAG--AL 183
           L   +A+A + +L   L   + + DAP  A    Y   G  + YL   + P +V    A+
Sbjct: 97  LDTAKAIAHYQQLPVVLIPTIASTDAPTSALSVIYTEQGEFAEYLIYPRNPDMVVMDVAI 156

Query: 184 AASAPV-LAVAGLGDSNQFFRDVTADFEGQSPKCTQG 219
            A APV L VAG+GD+   + +  A F+ Q+     G
Sbjct: 157 IAKAPVRLLVAGMGDALSTYFEAQACFDAQATSMAGG 193


>3UVA-A nrPDB
          Length = 424

 Score = 30.0 bits (66), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 435 AVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWVKAARR 478
           A+++  G H ++L A + E    VVE  +LE     +WV+ A+R
Sbjct: 86  ALSLIPGKHRVNLHAIYAETDGKVVERDQLEPRHFEKWVRWAKR 129


>4AXH-A nrPDB
          Length = 668

 Score = 29.6 bits (65), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 13/88 (14%)

Query: 44  NFERFGNKTFPQRFLVSDRFW-VRGEGPIFFYTGNEGDVWAFANNSAF--------VAEL 94
           + E++G++T     L+    W V G   +  Y  ++ D++AF NN A         + E+
Sbjct: 340 SLEKYGDRT---DVLIQQHNWPVWGGDKVRTYLADQRDMYAFLNNRALNLMNKGLTLHEI 396

Query: 95  AAERGALLVFAEHRYYGKSLPFGAQSTQ 122
           AAE   L    + ++Y +S  +GA ST 
Sbjct: 397 AAEVSKLPGELDRKWYLRSY-YGALSTN 423


>6BJE-A nrPDB
          Length = 222

 Score = 29.3 bits (64), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 132 EQALADFAELLRALRRDLGAQDAPA--IAFGG-SYGGMLSAYLRMKYPHLVAGALAAS 186
           E  +   AE ++AL         PA  I  GG S GG LS Y  +  PH +AG +A S
Sbjct: 80  EAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPHPLAGIVALS 137


>2RON-A nrPDB
          Length = 242

 Score = 28.5 bits (62), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 10/62 (16%)

Query: 123 RGHTELLTVE---------QALADFAELLRALRRDLGAQ-DAPAIAFGGSYGGMLSAYLR 172
           +G  E+L  E          A+ D  EL    +++L  + D P + FG S GGM++  L 
Sbjct: 37  QGECEMLAAEPPGHGTNQTSAIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLA 96

Query: 173 MK 174
            K
Sbjct: 97  QK 98


>3O0X-A nrPDB
          Length = 273

 Score = 28.1 bits (61), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 335 PTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDE--LRQRYCLDTWGV 388
           P G G+GPDA  + Y +   + L         +F +   T++    + +  +TWGV
Sbjct: 191 PKGSGSGPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGV 246


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3N0T-A nrPDB                                                          843   0.0  
3N2Z-B nrPDB                                                          748   0.0  

Sequences not found previously or not previously below threshold:

3UVA-A nrPDB                                                           36   0.039
2X9J-A nrPDB                                                           35   0.069
2FWM-X nrPDB                                                           32   0.53 
2H1I-A nrPDB                                                           31   1.6  
3WYD-A nrPDB                                                           30   2.4  
5EGN-A nrPDB                                                           30   2.9  
3I1I-A nrPDB                                                           29   3.6  
6EJB-A nrPDB                                                           29   4.2  
3WMR-A nrPDB                                                           29   4.6  
3QGK-C nrPDB                                                           29   4.7  
3OZ2-A nrPDB                                                           29   5.0  
2B61-A nrPDB                                                           29   5.0  
4CRL-A nrPDB                                                           29   5.1  


CONVERGED!
>3N0T-A nrPDB
          Length = 469

 Score =  843 bits (2179), Expect = 0.0,   Method: Composition-based stats.
 Identities = 465/465 (100%), Positives = 465/465 (100%)

Query: 28  DPGFQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANN 87
           DPGFQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANN
Sbjct: 5   DPGFQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANN 64

Query: 88  SAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 147
           SAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR
Sbjct: 65  SAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRR 124

Query: 148 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTA 207
           DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTA
Sbjct: 125 DLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTA 184

Query: 208 DFEGQSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFT 267
           DFEGQSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFT
Sbjct: 185 DFEGQSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFT 244

Query: 268 VLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLVYNASGSEHCYDIYR 327
           VLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLVYNASGSEHCYDIYR
Sbjct: 245 VLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLVYNASGSEHCYDIYR 304

Query: 328 LYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWG 387
           LYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWG
Sbjct: 305 LYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWG 364

Query: 388 VWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDL 447
           VWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDL
Sbjct: 365 VWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDL 424

Query: 448 RASHPEDPASVVEARKLEATIIGEWVKAARREQQPALRGGPRLSL 492
           RASHPEDPASVVEARKLEATIIGEWVKAARREQQPALRGGPRLSL
Sbjct: 425 RASHPEDPASVVEARKLEATIIGEWVKAARREQQPALRGGPRLSL 469


>3N2Z-B nrPDB
          Length = 446

 Score =  748 bits (1930), Expect = 0.0,   Method: Composition-based stats.
 Identities = 195/449 (43%), Positives = 272/449 (60%), Gaps = 23/449 (5%)

Query: 35  FFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANNSAFVAEL 94
           +FQQ++DHF F     KTF QR+LV+D++W +  G I FYTGNEGD+  F NN+ F+ ++
Sbjct: 7   YFQQKVDHFGFNTV--KTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDV 64

Query: 95  AAERGALLVFAEHRYYGKSLPFGAQSTQRG-HTELLTVEQALADFAELLRALRRDL-GAQ 152
           A E  A+LVFAEHRYYG+SLPFG  S +   H   LT EQALADFAEL++ L+R + GA+
Sbjct: 65  AEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAE 124

Query: 153 DAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFEGQ 212
           + P IA GGSYGGML+A+ RMKYPH+V GALAASAP+     L     F + VT DF   
Sbjct: 125 NQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKS 184

Query: 213 SPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGT---CQPLSDEKDLTQLFMFARNAFTVL 269
            P C++ +  ++  I  L   G+   ++W  G    C PL+ + D+  L  +    +  L
Sbjct: 185 GPHCSESIHRSWDAINRLSNTGS--GLQWLTGALHLCSPLTSQ-DIQHLKDWISETWVNL 241

Query: 270 AMMDYPYPTDFLGPLPANPVKVGCDRL----LSEAQRITGLRALAGLVYNASGSEHCYDI 325
           AM+DYPY ++FL PLPA P+KV C  L    +S++  +  +     + YN SG   C +I
Sbjct: 242 AMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNI 301

Query: 326 YRLYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDT 385
                S     G         W YQACTE+ + F +N V DMF    +  +     C   
Sbjct: 302 SETATSSLGTLG---------WSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQ 352

Query: 386 WGVWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHL 445
           WGV PRP W+ T + G ++ + +NI+FSNG LDPW+GGG+ ++++ +++AVTI  GAHHL
Sbjct: 353 WGVRPRPSWITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHL 412

Query: 446 DLRASHPEDPASVVEARKLEATIIGEWVK 474
           DLR  +  DP SV+ AR LE   +  W++
Sbjct: 413 DLRTKNALDPMSVLLARSLEVRHMKNWIR 441


>3UVA-A nrPDB
          Length = 424

 Score = 35.8 bits (81), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 435 AVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWVKAARR 478
           A+++  G H ++L A + E    VVE  +LE     +WV+ A+R
Sbjct: 86  ALSLIPGKHRVNLHAIYAETDGKVVERDQLEPRHFEKWVRWAKR 129


>2X9J-A nrPDB
          Length = 233

 Score = 35.0 bits (79), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 420 WAGGGIRRNLSASVIAVTIQGGAHHLDLRASHPEDPAS 457
           W GG + ++   + +   I+ G H L  R +H  DP S
Sbjct: 47  WDGGNVTKDGGDAKLTANIRTGEHFLKAREAHIVDPNS 84


>2FWM-X nrPDB
          Length = 250

 Score = 32.3 bits (72), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 274 YPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGL 312
           YP+ T+ +    A  V   C RLL+E +R+  L   AG+
Sbjct: 46  YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGI 84


>2H1I-A nrPDB
          Length = 226

 Score = 30.8 bits (68), Expect = 1.6,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 66/195 (33%), Gaps = 21/195 (10%)

Query: 76  GNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQAL 135
           GNE D+   A      A + + RG +L     R++ +                 T E   
Sbjct: 49  GNELDLLPLAEIVDSEASVLSVRGNVLENGMPRFFRR---LAEGIFDEEDLIFRTKE--- 102

Query: 136 ADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV----LA 191
               E L    ++        +A G S G  ++A L   Y + + GA+     V    + 
Sbjct: 103 --LNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRGMQ 160

Query: 192 VAGLGDSNQFFRDVTADFEGQSPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSD 251
           +A L   + F    T D     P C+    E  + +  L    A  T+ WE    Q    
Sbjct: 161 LANLAGKSVFIAAGTND-----PICSSAESEELKVL--LENANANVTMHWENRGHQ--LT 211

Query: 252 EKDLTQLFMFARNAF 266
             ++ +   +   AF
Sbjct: 212 MGEVEKAKEWYDKAF 226


>3WYD-A nrPDB
          Length = 228

 Score = 30.0 bits (66), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 10/93 (10%)

Query: 97  ERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPA 156
           +RGA ++ AE+R Y  + P G Q         + V  A  D  +++  +RRD        
Sbjct: 58  QRGAFMIEAENRGYIVACPKGRQPAS------MYVGPAERDVMDVIAEVRRDYKIDPDRI 111

Query: 157 IAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 189
              G S GG  +  + M +P +     AA APV
Sbjct: 112 YMTGHSMGGYGTWSIAMNHPDV----FAALAPV 140


>5EGN-A nrPDB
          Length = 271

 Score = 29.6 bits (65), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 15/96 (15%)

Query: 102 LVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGG 161
           ++  +HR +G+S         +  T    +E A  D   +L AL+ D       A+  G 
Sbjct: 48  VIVIDHRGHGRS--------DKPATGYSIMEHA-DDVVAVLDALKVD------RAVFVGN 92

Query: 162 SYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGD 197
           S GGM++  L + +P  V G L  S+      G+  
Sbjct: 93  SIGGMIAMQLNLDHPQRVIGNLILSSGTGLGEGMPP 128


>3I1I-A nrPDB
          Length = 377

 Score = 29.2 bits (64), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 137 DFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLV 179
           D A +   L +D+G     A+  G S GGM++    + YPH+V
Sbjct: 131 DVARMQCELIKDMGIARLHAV-MGPSAGGMIAQQWAVHYPHMV 172


>6EJB-A nrPDB
          Length = 751

 Score = 29.2 bits (64), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 249 LSDEKDLTQLFMFARNAFTVLAMMDYPYPTD 279
           L   +DL ++  +  + F  L+  DYP  T+
Sbjct: 194 LQSMRDLLEMTDWPWDFFINLSAADYPIRTN 224


>3WMR-A nrPDB
          Length = 315

 Score = 29.2 bits (64), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 14/138 (10%)

Query: 157 IAFGGSYGGMLSAYLRMKYPHLVAGALAASAP----VLAVAGLGDSNQFFRDVTADFEGQ 212
           + FG S+GGML +    + P  + G + A+AP    +              DV       
Sbjct: 121 VLFGQSWGGMLGSVHAARRPAGLRGLVVANAPASMKIWLQEMARLRALLPPDVQETLLKH 180

Query: 213 SPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFTVLAMM 272
               T    E F  ++  + +     V W           +D    FM   N  TV   M
Sbjct: 181 EAARTTDTEEYFHAMRAFYDRHVCRIVPW----------PRDFAATFMEIYNDPTVYTTM 230

Query: 273 DYPYPTDFLGPLPANPVK 290
           + P     +G L    V+
Sbjct: 231 NGPNEFHVIGTLRDWSVE 248


>3QGK-C nrPDB
          Length = 568

 Score = 28.9 bits (63), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 23/114 (20%)

Query: 106 EHRY--YGKSLPFGA-----------QSTQRGHTELLTVEQALADFAELLRALRRDLGAQ 152
           EH Y  YG+ L FGA            S      +L+     + D+  + +A   D+G +
Sbjct: 32  EHDYTVYGEELKFGAGKTIREGMGQSNSPDENTLDLVITNALIIDYTGIYKA---DIGIK 88

Query: 153 DAPAIAFGGSYGGMLSAYLRMKYPHLVAG----ALAASAPVLAVAGLGDSNQFF 202
           +      G +    +   +    PH+V G    ALA    ++   G+     F 
Sbjct: 89  NGKIHGIGKAGNKDMQDGVT---PHMVVGVGTEALAGEGMIITAGGIDSHTHFL 139


>3OZ2-A nrPDB
          Length = 397

 Score = 28.9 bits (63), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 21/57 (36%)

Query: 417 LDPWAGGGIRRNLSASVIAVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWV 473
           +DP  GGGI   + + + A  +   A   +  +         +   + E   +  WV
Sbjct: 289 IDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWV 345


>2B61-A nrPDB
          Length = 377

 Score = 28.9 bits (63), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 137 DFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLG 196
           D  ++ +AL   LG     AI  GGS+GGM +    + YP  +   +   + +   A   
Sbjct: 138 DIVKVQKALLEHLGISHLKAI-IGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEAI 196

Query: 197 DSNQFFR 203
             N   R
Sbjct: 197 GFNHVMR 203


>4CRL-A nrPDB
          Length = 406

 Score = 28.9 bits (63), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 20/112 (17%)

Query: 170 YLRMKYPHLVAGA--LAASAPVLA----VAGLGDSNQFFRDVTADFEGQSPKCTQGVREA 223
           + R   P L+ GA     +  + A     A L  S   F     D +  +P         
Sbjct: 201 WYRA--PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY-------H 251

Query: 224 FRQIKDLFL-QGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFTVLAMMDY 274
             Q+  +F   G      WE     P       T +  F RN +T  +++ Y
Sbjct: 252 HDQLDRIFNVMGFPADKDWEDIKKMPEHS----TLMKDFRRNTYTNCSLIKY 299


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.316    0.136    0.419 

Lambda     K      H
   0.267   0.0422    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,508,297
Number of Sequences: 36641
Number of extensions: 929593
Number of successful extensions: 2100
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 2069
Number of HSP's gapped (non-prelim): 40
length of query: 492
length of database: 10,336,785
effective HSP length: 101
effective length of query: 391
effective length of database: 6,636,044
effective search space: 2594693204
effective search space used: 2594693204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)