BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9SN68 (200 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4G01-B nrPDB 369 e-103 1TU4-A nrPDB 246 5e-66 2HEI-A nrPDB 241 2e-64 4KYI-B nrPDB 235 1e-62 2FG5-A nrPDB 200 3e-52 1EK0-A nrPDB 190 3e-49 1YVD-A nrPDB 186 6e-48 5YOZ-A nrPDB 176 5e-45 5XR6-A nrPDB 162 8e-41 1D5C-A nrPDB 158 1e-39 5LEF-A nrPDB 158 2e-39 2FFQ-A nrPDB 156 6e-39 3CPJ-B nrPDB 156 7e-39 5FBL-B nrPDB 155 1e-38 2RHD-A nrPDB 155 1e-38 2F9L-A nrPDB 155 1e-38 1Z0A-A nrPDB 155 1e-38 3BFK-A nrPDB 154 2e-38 5UB8-A nrPDB 153 4e-38 2A5J-A nrPDB 152 8e-38 2GIL-A nrPDB 152 8e-38 5SZH-B nrPDB 152 1e-37 4UJ4-A nrPDB 152 1e-37 1Z0F-A nrPDB 149 6e-37 4RKE-A nrPDB 149 6e-37 3L0I-B nrPDB 148 2e-36 3TSO-A nrPDB 147 4e-36 3CLV-A nrPDB 146 5e-36 1YZU-A nrPDB 146 6e-36 3CUE-F nrPDB 146 7e-36 3RWM-B nrPDB 145 9e-36 2O52-A nrPDB 145 1e-35 2WWX-A nrPDB 144 2e-35 1YZN-A nrPDB 144 3e-35 3CPH-A nrPDB 143 5e-35 5SZJ-A nrPDB 142 1e-34 2OCY-C nrPDB 142 1e-34 2BMD-A nrPDB 140 3e-34 5LPN-A nrPDB 138 1e-33 2EW1-A nrPDB 138 2e-33 5SZI-A nrPDB 137 3e-33 4LHX-A nrPDB 137 3e-33 6O62-A nrPDB 134 2e-32 2HUP-A nrPDB 134 2e-32 2G6B-A nrPDB 134 3e-32 6IF2-B nrPDB 129 7e-31 2GF9-A nrPDB 127 3e-30 5LDD-C nrPDB 127 4e-30 1X3S-A nrPDB 126 5e-30 4RKF-A nrPDB 124 2e-29 3RAB-A nrPDB 124 4e-29 2OCB-A nrPDB 123 5e-29 4PHF-A nrPDB 122 8e-29 4FMC-F nrPDB 122 9e-29 2IL1-A nrPDB 122 1e-28 1ZBD-A nrPDB 120 3e-28 3DZ8-A nrPDB 118 1e-27 6IYB-A nrPDB 117 2e-27 1WMS-A nrPDB 117 4e-27 6HUF-A nrPDB 116 5e-27 4QXA-A nrPDB 116 6e-27 1Z22-A nrPDB 114 3e-26 2P5S-A nrPDB 113 6e-26 1Z06-A nrPDB 112 8e-26 2G77-B nrPDB 112 2e-25 5UWI-A nrPDB 110 4e-25 2N1B-A nrPDB 110 5e-25 5CLL-A nrPDB 109 1e-24 5CM8-B nrPDB 108 1e-24 2F7S-A nrPDB 106 7e-24 4DXA-A nrPDB 104 2e-23 5XC3-A nrPDB 104 2e-23 2KE5-A nrPDB 102 7e-23 2IEZ-A nrPDB 102 9e-23 1ZC4-A nrPDB 102 1e-22 2IEY-A nrPDB 102 1e-22 3BC1-A nrPDB 101 2e-22 4M8N-E nrPDB 100 5e-22 3WYF-A nrPDB 99 1e-21 5XOJ-A nrPDB 99 1e-21 2ATV-A nrPDB 97 6e-21 5C2K-A nrPDB 96 1e-20 4KU4-A nrPDB 96 1e-20 4DJT-A nrPDB 95 2e-20 5ZHX-e nrPDB 94 3e-20 2ERY-A nrPDB 92 1e-19 4KLZ-A nrPDB 91 3e-19 3E5H-A nrPDB 91 3e-19 4CZ2-A nrPDB 90 7e-19 5JCP-B nrPDB 89 1e-18 2J0V-A nrPDB 89 2e-18 6FF8-A nrPDB 89 2e-18 3BWD-D nrPDB 89 2e-18 5WDR-A nrPDB 88 3e-18 2NTY-C nrPDB 87 4e-18 2WBL-C nrPDB 87 5e-18 5WDQ-A nrPDB 85 2e-17 2FV8-A nrPDB 84 3e-17 4WA7-A nrPDB 84 3e-17 2ERX-A nrPDB 83 9e-17 3RAP-R nrPDB 82 1e-16 5UHV-A nrPDB 82 2e-16 3CON-A nrPDB 81 3e-16 4U5X-A nrPDB 81 3e-16 2J1L-A nrPDB 80 5e-16 2FN4-A nrPDB 80 6e-16 3OES-A nrPDB 80 7e-16 2ATX-A nrPDB 80 9e-16 3A58-B nrPDB 79 1e-15 3PIR-A nrPDB 79 1e-15 2Q3H-A nrPDB 78 2e-15 1GWN-A nrPDB 76 1e-14 1M7B-A nrPDB 76 1e-14 3T5G-A nrPDB 75 2e-14 2CJW-A nrPDB 75 2e-14 2G3Y-A nrPDB 75 2e-14 2GF0-A nrPDB 75 3e-14 2W2X-A nrPDB 74 3e-14 5ZVP-A nrPDB 74 4e-14 3TH5-A nrPDB 74 5e-14 5VCU-A nrPDB 74 5e-14 3RYT-C nrPDB 72 2e-13 4MIT-A nrPDB 70 4e-13 2YC4-C nrPDB 70 6e-13 2NZJ-A nrPDB 69 1e-12 2WKQ-A nrPDB 69 2e-12 3VHL-B nrPDB 67 4e-12 1RYH-A nrPDB 67 7e-12 2REX-B nrPDB 66 8e-12 3REG-A nrPDB 65 3e-11 3Q72-A nrPDB 64 3e-11 3CBQ-A nrPDB 62 1e-10 3Q85-A nrPDB 60 6e-10 5C1S-A nrPDB 58 3e-09 4ILE-A nrPDB 58 3e-09 5HZH-A nrPDB 58 3e-09 2AL7-A nrPDB 57 5e-09 3D6T-B nrPDB 53 9e-08 2A5F-A nrPDB 52 1e-07 3LVQ-E nrPDB 50 4e-07 3C5C-A nrPDB 50 5e-07 4WNR-A nrPDB 50 7e-07 6BBQ-A nrPDB 50 8e-07 5NZV-F nrPDB 49 2e-06 2IWR-A nrPDB 45 2e-05 1MOZ-A nrPDB 43 7e-05 4YLG-A nrPDB 42 1e-04 2H16-A nrPDB 41 4e-04 3LRP-A nrPDB 40 6e-04 5UF8-A nrPDB 40 7e-04 3O47-A nrPDB 39 0.002 1Z6X-A nrPDB 39 0.002 6FAE-B nrPDB 38 0.003 3DPU-A nrPDB 37 0.004 2B6H-A nrPDB 37 0.004 1YZG-A nrPDB 37 0.006 4V0N-A nrPDB 37 0.008 5EE5-B nrPDB 36 0.011 2H57-A nrPDB 36 0.011 6DFF-C nrPDB 35 0.017 1J2J-A nrPDB 35 0.022 6HLU-A nrPDB 35 0.026 1KSG-A nrPDB 35 0.030 3AQ4-A nrPDB 35 0.031 6CES-A nrPDB 34 0.038 6CES-C nrPDB 33 0.061 5DE3-A nrPDB 33 0.063 4ZI3-A nrPDB 33 0.074 2X77-A nrPDB 33 0.100 2Q3F-A nrPDB 32 0.23 3LLU-A nrPDB 31 0.34 4ARZ-A nrPDB 30 0.66 3BH6-A nrPDB 30 0.73 4JGT-A nrPDB 30 0.88 3K2Z-A nrPDB 28 2.6 3OPB-A nrPDB 28 3.5 5M65-A nrPDB 27 4.0 1AVB-A nrPDB 27 5.0 3LLM-A nrPDB 27 7.3 5VHD-D nrPDB 26 9.2 5EQV-A nrPDB 26 9.7 >4G01-B nrPDB Length = 181 Score = 369 bits (946), Expect = e-103, Method: Compositional matrix adjust. Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK Sbjct: 3 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 62 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL Sbjct: 63 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 122 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN Sbjct: 123 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 181 >1TU4-A nrPDB Length = 171 Score = 246 bits (627), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 115/169 (68%), Positives = 139/169 (82%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK KLVLLG+ GKSSLVLRFVK QF EFQESTIGAAF +QT+ ++D TVKFEIW Sbjct: 2 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIW 61 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DTAGQERYHSLAPMYYRGA AAI+V+D+TN+ SF RAK WV+ELQ Q +PN+V+AL+GNK Sbjct: 62 DTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNK 121 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 +DL + R V ++AQ+YA +N L FMETSAKT+ NV EIF IA++LP+ Sbjct: 122 ADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 170 >2HEI-A nrPDB Length = 179 Score = 241 bits (615), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 111/165 (67%), Positives = 137/165 (83%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLVLLG+ GKSSLVLRFVK QF E+QESTIGAAF +Q++ ++D TVKFEIWDTAGQER Sbjct: 10 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 69 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 YHSLAPMYYRGA AAI+V+D+TNQ +F RAK WV+ELQ Q +P++V+ALAGNK+DL + R Sbjct: 70 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKR 129 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 V E+AQ YA +N L FMETSAKTA NV ++F IA++LP+ +P Sbjct: 130 MVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEP 174 >4KYI-B nrPDB Length = 170 Score = 235 bits (599), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/169 (66%), Positives = 134/169 (79%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 A G+K KLVLLG+ GKSSLVLRFVK QF E+QESTIGAAF +QT+ ++D TVKFE Sbjct: 2 AMGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFE 61 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 IWDTAG ERYHSLAPMYYRGA AAI+V+D+TN +F RAK WV+ELQ Q +PN+V+ALAG Sbjct: 62 IWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAG 121 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 NK+DL R V ++AQ YA +N L FMETSAKTA NV EIF IA++L Sbjct: 122 NKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 170 >2FG5-A nrPDB Length = 192 Score = 200 bits (508), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 93/168 (55%), Positives = 122/168 (72%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+ LLGD G GKSS+V RFV+D F TIGA+F ++T+ + KF IWDTAGQER Sbjct: 25 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQER 84 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 +HSLAPMYYRG+AAA+IV+D+T Q SF KKWV+EL+ G N+VMA+AGNK DL D R Sbjct: 85 FHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIR 144 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 +V +DA+ YA+ G +ETSAK A N++E+F I+R++P + P EN Sbjct: 145 EVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHEN 192 >1EK0-A nrPDB Length = 170 Score = 190 bits (483), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 90/164 (54%), Positives = 118/164 (71%), Gaps = 3/164 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLVLLG+ GKSS+VLRFV + F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQER Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD-- 129 + SLAPMYYR A AA++V+DVT SF +A+ WV+EL Q + ++++AL GNK D+L Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 124 Query: 130 -ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 RKV E+ + A+E GL F ETSAKT NV ++F I ++P Sbjct: 125 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168 >1YVD-A nrPDB Length = 169 Score = 186 bits (472), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 87/161 (54%), Positives = 115/161 (71%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+ LLGD G GKSS+V RFV+D F TIGA+F ++T+ + KF IWDTAGQER Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + +LAPMYYRG+AAAIIV+D+T + +F K WV+EL+ G P++V+A+AGNK DL D R Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVR 126 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 +V DA+ YA F+ETSAK A N+ E+F EI+RR+P Sbjct: 127 EVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167 >5YOZ-A nrPDB Length = 177 Score = 176 bits (447), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 80/166 (48%), Positives = 124/166 (74%), Gaps = 1/166 (0%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 ++ +AK+V+LG+ GAGKSS+ LRF +++F+ QE+TIGAAF S+T+ ++ +K+EIWDT Sbjct: 12 EATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDT 71 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 AG ER+ SLAP+YYRGA+ A++V+D+TN S ++A+ W++EL+A +P++++ L GNK D Sbjct: 72 AGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKD 131 Query: 127 LLDARKVTAEDAQTYAQENGL-FFMETSAKTATNVKEIFYEIARRL 171 L R+V+ ED Q A E L F E SAK NV+++F ++A +L Sbjct: 132 LGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLAAKL 177 >5XR6-A nrPDB Length = 194 Score = 162 bits (410), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 76/163 (46%), Positives = 110/163 (67%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLVL+GD G GKS+L+ RF K++F +STIG F ++T V VK +IWDTAGQER Sbjct: 27 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 86 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA A++++DVT A+FE A +W++EL+ +PN+V+ L GNK DL Sbjct: 87 YRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLV 146 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 V E+A+ +A+ L+FMETSA ATNV+ F E+ ++ ++ Sbjct: 147 AVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKI 189 >1D5C-A nrPDB Length = 162 Score = 158 bits (400), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 75/160 (46%), Positives = 108/160 (67%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLV LG+ GK+S++ RF+ D F +STIG F S+TL +++ V+ ++WDTAGQER Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + SL P Y R +AAAI+V+D+TN+ SFE KW+Q++ + ++++AL GNK+DL D R Sbjct: 63 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDLR 122 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 KVT E+ AQE F ETSAK N+K +F + A +L Sbjct: 123 KVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 >5LEF-A nrPDB Length = 191 Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 72/178 (40%), Positives = 116/178 (65%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 A GN KLV LG+ GK+SL+ RF+ D F ++TIG F S+T+ + D TV+ Sbjct: 1 GAMGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 ++WDTAG ER+ SL P Y R + A++V+D+TN SF++ KW+ +++ + ++++ L Sbjct: 61 QLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLV 120 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 GNK+DL D R+V+ E+ + A+E + F+ETSAK NVK++F +A LP ++ T++ Sbjct: 121 GNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQD 178 >2FFQ-A nrPDB Length = 171 Score = 156 bits (394), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 68/157 (43%), Positives = 108/157 (68%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLV LG+ GK+SL+ RF+ D F ++TIG F S+T+ + D TV+ ++WDTAGQER Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 63 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + SL P Y R + A++V+D+TN SF++ KW+ +++ + ++++ L GNK+DL D R Sbjct: 64 FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKR 123 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIA 168 ++T E+ + A+E + F+ETSAKT NVK++F +A Sbjct: 124 QITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVA 160 >3CPJ-B nrPDB Length = 223 Score = 156 bits (394), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 72/156 (46%), Positives = 104/156 (66%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+GD G GKS+L+ RF K++F +STIG F ++TL + +K +IWDTAGQER Sbjct: 15 KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQER 74 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA A+IV+D++ +S+E W+ EL+ + N+ + L GNKSDL R Sbjct: 75 YRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLR 134 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 V E+++T+AQEN L F ETSA + NV + F E+ Sbjct: 135 AVPTEESKTFAQENQLLFTETSALNSENVDKAFEEL 170 >5FBL-B nrPDB Length = 221 Score = 155 bits (392), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 70/163 (42%), Positives = 112/163 (68%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+ T+K +IWDTAGQER Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 77 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA A++V+D+ ++E ++W++EL+ + N+V+ L GNKSDL R Sbjct: 78 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 137 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 V ++A+ +A++NGL F+ETSA +TNV+ F I + R+ Sbjct: 138 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 180 >2RHD-A nrPDB Length = 175 Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 75/165 (45%), Positives = 110/165 (66%), Gaps = 1/165 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GKS L+LRF D + + STIG F +T+++ + TVK +IWDTAGQER Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER 70 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA IIV+DVT++ SF+ K+W+QE+ N+ L GNK DL+ R Sbjct: 71 FRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCDLVSKR 130 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL-PRVQ 175 VT+++ + A +G+ F+ETSAK A NV++ F+ +A + RVQ Sbjct: 131 VVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQ 175 >2F9L-A nrPDB Length = 199 Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 70/163 (42%), Positives = 111/163 (68%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+ T+K +IWDTAGQER Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y + YYRGA A++V+D+ ++E ++W++EL+ + N+V+ L GNKSDL R Sbjct: 67 YRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 126 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 V ++A+ +A++N L F+ETSA +TNV+E F I + R+ Sbjct: 127 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 169 >1Z0A-A nrPDB Length = 174 Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 69/160 (43%), Positives = 106/160 (66%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + S+ YYRGAA A++V+D+T + +F W+++ + N NMV+ L GNKSDL R Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 +V E+ + +A+E+GL FMETSAKTA+NV+E F A+ + Sbjct: 132 EVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 171 >3BFK-A nrPDB Length = 181 Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 74/171 (43%), Positives = 114/171 (66%), Gaps = 1/171 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV-NDATVKFEIWDTAGQE 70 K+VL+GD G GKS+L+ RF +D+F +STIG F ++++ + N+ +K +IWDTAGQE Sbjct: 9 KIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQE 68 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDA 130 RY ++ YYRGA A++V+D+T + SFE +KW++EL+ + N+V+ L GNKSDL Sbjct: 69 RYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKSDLKHL 128 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPT 181 R + DA YA++ L F+ETSA ATNV+ F+++ + V+ + T Sbjct: 129 RVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQAT 179 >5UB8-A nrPDB Length = 222 Score = 153 bits (387), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 70/160 (43%), Positives = 105/160 (65%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+GD G GKS+L+ RF +D+F STIG F ++TL ++ VK +IWDTAGQER Sbjct: 17 KIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQER 76 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA A+IV+D+ S+E +W++EL+ + N+++ L GNKSDL R Sbjct: 77 YRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSDLDHLR 136 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 V E+A+ +A EN L F E SA ++ NV F+++ + + Sbjct: 137 AVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNI 176 >2A5J-A nrPDB Length = 191 Score = 152 bits (385), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 69/162 (42%), Positives = 105/162 (64%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE Sbjct: 23 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 82 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + S+ YYRGAA A++V+D+T + +F W+++ + + NMV+ L GNKSDL R Sbjct: 83 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRR 142 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 V E+ + +A+E+GL FMETSAKTA NV+E F A+ + R Sbjct: 143 DVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYR 184 >2GIL-A nrPDB Length = 162 Score = 152 bits (384), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 67/157 (42%), Positives = 107/157 (68%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLV LG+ GK+SL+ RF+ D F ++TIG F S+T+ + D TV+ ++WDTAGQER Sbjct: 3 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 62 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + SL P Y R + A++V+D+TN SF++ KW+ +++ + ++++ L GNK+DL D R Sbjct: 63 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKR 122 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIA 168 +V+ E+ + A+E + F+ETSAK NVK++F +A Sbjct: 123 QVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 159 >5SZH-B nrPDB Length = 203 Score = 152 bits (383), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 77/192 (40%), Positives = 113/192 (58%), Gaps = 4/192 (2%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+K +IWDTAGQER Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA I+V+DVT+Q S+ K+W+QE+ + N+ L GNKSDL + Sbjct: 72 FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKK 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMD 191 V A+ +A G+ F+ETSAK ATNV++ F +A + + +G P+ +D Sbjct: 132 VVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 191 Query: 192 ----RAVSSSCC 199 + CC Sbjct: 192 STPVKPAGGGCC 203 >4UJ4-A nrPDB Length = 185 Score = 152 bits (383), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 69/163 (42%), Positives = 111/163 (68%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+ T+K +IWDTAG ER Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLER 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA A++V+D+ ++E ++W++EL+ + N+V+ L GNKSDL R Sbjct: 72 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 V ++A+ +A++NGL F+ETSA +TNV+ F I + R+ Sbjct: 132 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 174 >1Z0F-A nrPDB Length = 179 Score = 149 bits (377), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 110/166 (66%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 N S K +++GD+G GKS L+ +F + +F+ TIG F ++ + V+ +K +IWD Sbjct: 11 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 70 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQER+ ++ YYRGAA A++V+D+T ++++ W+ + + NPN V+ L GNK+ Sbjct: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 130 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 DL R VT E+A+ +A+ENGL F+E SAKT NV++ F E A+++ Sbjct: 131 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 176 >4RKE-A nrPDB Length = 176 Score = 149 bits (377), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 67/160 (41%), Positives = 104/160 (65%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAG E Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLEA 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + S+ YYRGAA A++V+D+T + +F W+++ + N NMV+ L GNKSDL R Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 +V E+ + +A+E+GL FMETSA+TA NV+E F A+ + Sbjct: 132 EVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEI 171 >3L0I-B nrPDB Length = 199 Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 72/162 (44%), Positives = 103/162 (63%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+K +IWDTAGQER Sbjct: 35 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 94 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA I+V+DVT+Q SF K+W+QE+ + N+ L GNK DL + Sbjct: 95 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKK 154 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 V A+ +A G+ F+ETSAK ATNV++ F +A + + Sbjct: 155 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKK 196 >3TSO-A nrPDB Length = 178 Score = 147 bits (370), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 110/167 (65%), Gaps = 8/167 (4%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+G+ G GK++L+ RF +++F +TIG F ++T+ + A VK +IWDTAG ER Sbjct: 12 KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA A++VFD+T ++ ++W++EL +V+ L GNKSDL AR Sbjct: 72 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNV--------KEIFYEIARR 170 +V E+A+ +A+ NGL F+ETSA +TNV KEIF +++++ Sbjct: 132 EVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178 >3CLV-A nrPDB Length = 208 Score = 146 bits (369), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 78/199 (39%), Positives = 108/199 (54%), Gaps = 40/199 (20%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV----------------- 54 K VLLG+ GKSS+VLR KD F E +TIGA+F + + + Sbjct: 9 KTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNNI 68 Query: 55 --------------------NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTN 94 N +KF+IWDTAGQERY S+ P+YYRGA AI+VFD++N Sbjct: 69 NSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDISN 128 Query: 95 QASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSA 154 + +RAK WV +L+ N ++ L NK D + +V + Q YAQ+N L F++TSA Sbjct: 129 SNTLDRAKTWVNQLKIS--SNYIIILVANKID-KNKFQVDILEVQKYAQDNNLLFIQTSA 185 Query: 155 KTATNVKEIFYEIARRLPR 173 KT TN+K IFY +A + + Sbjct: 186 KTGTNIKNIFYMLAEEIYK 204 >1YZU-A nrPDB Length = 170 Score = 146 bits (368), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 64/167 (38%), Positives = 111/167 (66%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G+++ + K+VLLG+ GK+SLVLR+ +++F + +T+ A+F ++ L + V IW Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 60 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DTAGQER+H+L P+YYR + AI+V+D+T++ SF++ K WV+EL+ + + + GNK Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 120 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 DL R V+ ++A++YA+ G TSAK ++E+F ++ +R+ Sbjct: 121 IDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 167 >3CUE-F nrPDB Length = 206 Score = 146 bits (368), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 72/168 (42%), Positives = 104/168 (61%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+G+ G GKS L+LRF D + STIG F +T+ ++ TVK +IWDTAGQER Sbjct: 10 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 69 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRG+ IIV+DVT+Q SF K W+QE+ ++ L GNK DL D R Sbjct: 70 FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKR 129 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 V + A+ +A N + F+ETSA +TNV++ F +AR++ +N Sbjct: 130 VVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQN 177 >3RWM-B nrPDB Length = 185 Score = 145 bits (367), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 68/156 (43%), Positives = 101/156 (64%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+GD G GKS+L+ RF D+F +STIG F ++T+ V + +K +IWDTAG ER Sbjct: 12 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLER 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA A+IV+D++ +S+E W+ EL+ + N+ + L GNKSDL R Sbjct: 72 YRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 V ++A+ +A EN + F ETSA + NV + F E+ Sbjct: 132 AVPTDEAKNFAMENQMLFTETSALNSDNVDKAFREL 167 >2O52-A nrPDB Length = 200 Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 69/160 (43%), Positives = 105/160 (65%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K +++G G GKS L+ +F++++F + TIG F S+ + V TVK +IWDTAGQER Sbjct: 27 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 86 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + S+ YYRGAA A++V+D+T++ ++ W+ + + +PN+V+ L GNK DL R Sbjct: 87 FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 146 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 +VT +A +AQEN L F+ETSA T NV+E F + AR + Sbjct: 147 EVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 186 >2WWX-A nrPDB Length = 175 Score = 144 bits (364), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/162 (43%), Positives = 102/162 (62%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+K +IWDTAGQER Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA I+V+DVT+Q SF K+W+QE+ + N+ L G K DL + Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGIKCDLTTKK 129 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 V A+ +A G+ F+ETSAK ATNV++ F +A + + Sbjct: 130 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKK 171 >1YZN-A nrPDB Length = 185 Score = 144 bits (362), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 71/160 (44%), Positives = 102/160 (63%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+G+ G GKS L+LRF D + STIG F +T+ ++ TVK +IWDTAGQER Sbjct: 23 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 82 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRG+ IIV+DVT+Q SF K W+QE+ ++ L GNK DL D R Sbjct: 83 FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKR 142 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 V + A+ +A N + F+ETSA +TNV++ F +AR++ Sbjct: 143 VVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 182 >3CPH-A nrPDB Length = 213 Score = 143 bits (360), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 73/173 (42%), Positives = 114/173 (65%), Gaps = 4/173 (2%) Query: 2 AAAGN-KSINA--KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 58 A++GN KS ++ K++L+GD G GKS L++RFV+D+F +TIG F +T+ +N Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVM 118 VK ++WDTAGQER+ ++ YYRGA I+V+DVT++ +F K+W + + N + Sbjct: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 L GNKSD ++ R VTA+ + A+E G+ F+E+SAK NV EIF+ +A+ + Sbjct: 129 LLVGNKSD-METRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 180 >5SZJ-A nrPDB Length = 202 Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 100/169 (59%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GK+ ++ RF D F STIG F +T+ + +K +IWDTAGQER Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 +H++ YYRGA ++V+D+TN SFE KW++ + N ++ L GNK D+ D R Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 132 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 V + A+E+G+ F ETSAK N+++ F +A + R P + P Sbjct: 133 VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 181 >2OCY-C nrPDB Length = 170 Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 68/160 (42%), Positives = 105/160 (65%), Gaps = 1/160 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++L+GD G GKS L++RFV+D+F +TIG F +T+ +N VK ++WDTAGQER Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA I+V+DVT++ +F K+W + + N + L GNKSD ++ R Sbjct: 65 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD-METR 123 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 VTA+ + A+E G+ F+E+SAK NV EIF+ +A+ + Sbjct: 124 VVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLI 163 >2BMD-A nrPDB Length = 186 Score = 140 bits (353), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 71/174 (40%), Positives = 111/174 (63%), Gaps = 2/174 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K +++G+ G GKS L+ +F++ +F + TIG F S+ + V VK +IWDTAGQER Sbjct: 12 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + S+ YYRGAA A++V+D+T++ ++ W+ + + + N+V+ L GNK DL R Sbjct: 72 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARR-LPRVQPTE-NPTGM 183 +VT +A +AQEN L F+ETSA T NV+E F + AR+ L +++ E +P M Sbjct: 132 EVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 185 >5LPN-A nrPDB Length = 177 Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 66/165 (40%), Positives = 98/165 (59%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GK+ ++ RF D F STIG F +T+ + +K +IWDTAGQER Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 +H++ YYRGA ++V+D+TN SFE KW++ + N ++ L GNK D+ D R Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 132 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 V + A+E+G+ F ETSAK N+++ F +A + R P Sbjct: 133 VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 177 >2EW1-A nrPDB Length = 201 Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 63/160 (39%), Positives = 105/160 (65%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL+G+ G GK+ LV RF + F Q +TIG F +T+ +N VK +IWDTAGQER Sbjct: 28 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 87 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + S+ YYR A A I+ +D+T + SF +W++E++ + ++ L GNK DL + R Sbjct: 88 FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERR 147 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 +V+ + A+ +++ ++++ETSAK + NV+++F ++A RL Sbjct: 148 EVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 187 >5SZI-A nrPDB Length = 209 Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 102/161 (63%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GK+ ++ RF +D F STIG F +T+ ++ +K +IWDTAGQER Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA ++V+D+TN+ SF+ + W++ ++ + ++ + GNK D+ D R Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 +V+ E + A + G+ FMETSAK NV+ F+ +AR + Sbjct: 132 QVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIK 172 >4LHX-A nrPDB Length = 186 Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 102/161 (63%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GK+ ++ RF +D F STIG F +T+ ++ +K +IWDTAGQER Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA ++V+D+TN+ SF+ + W++ ++ + ++ + GNK D+ D R Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKR 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 +V+ E + A + G+ FMETSAK NV+ F+ +AR + Sbjct: 132 QVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIK 172 >6O62-A nrPDB Length = 184 Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 99/168 (58%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+GD G GKS L+LRFV+D+F +TIG F +T+ +K ++WDTAGQER Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQER 75 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA ++++DVT+ SFE + W Q + N + + L GNK D R Sbjct: 76 FRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNR 135 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 +V+ E Q A + + F+E SAK+ NV IFYE+A + EN Sbjct: 136 QVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHVEEN 183 >2HUP-A nrPDB Length = 201 Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/161 (42%), Positives = 100/161 (62%), Gaps = 1/161 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLVL+GD GK+ +V RF F E Q STIG F +TL + VK +IWDTAGQER Sbjct: 31 KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 90 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYR A AI+ +D+T ++SF W+++++ N+V L GNKSDL + R Sbjct: 91 FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELR 150 Query: 132 KVTAEDAQTYAQENGLFF-METSAKTATNVKEIFYEIARRL 171 +V+ +AQ+ A+ + +ETSAK ++NV+E F +A L Sbjct: 151 EVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 191 >2G6B-A nrPDB Length = 180 Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 1/163 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQ-ESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K++L+GD G GK+ L++RF F+ ST+G F ++ L V+ VK ++WDTAGQE Sbjct: 12 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 71 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDA 130 R+ S+ YYR A A ++++DVTN+ASF+ + W+ E+ ++ + L GNK D Sbjct: 72 RFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVDSAHE 131 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 R V ED + A+E GL FMETSAKT NV F IA+ L R Sbjct: 132 RVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKR 174 >6IF2-B nrPDB Length = 186 Score = 129 bits (325), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 1/165 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+++GD G GKSSL+LRF + F +TIG F +T+ +N VK +IWDTAG ER Sbjct: 16 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER 75 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRG I+V+DVT+ SF K+W+ E+ Q ++ L GNK+D + + Sbjct: 76 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEIN-QNCDDVCRILVGNKNDDPERK 134 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 V EDA +A + G+ ETSAK NV+E+F I + R + Sbjct: 135 VVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKK 179 >2GF9-A nrPDB Length = 189 Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 62/153 (40%), Positives = 90/153 (58%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+L+G+ GK+S + R+ D F ST+G F +T+ +D +K +IWDTAGQER Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA ++++D+ NQ SF + W +++ N + L GNK DL D R Sbjct: 84 YRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDER 143 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 V AED + A + G F E SAK NVK++F Sbjct: 144 VVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176 >5LDD-C nrPDB Length = 207 Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 6/187 (3%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + + K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V Sbjct: 2 SMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTM 61 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMV 117 ++WDTAGQER+ SL +YRGA ++VFDV N SF+ W E Q +P N Sbjct: 62 QLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFP 121 Query: 118 MALAGNKSDLLDARKV-TAEDAQTYAQ-ENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 + G K D+ ++++V + + AQT+ Q + G+ + ETSAK A NV+E F IAR + Sbjct: 122 FVVLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQE 181 Query: 176 PTENPTG 182 +E +G Sbjct: 182 ESEEFSG 188 >1X3S-A nrPDB Length = 195 Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 5/172 (2%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G+ G GKSSL+LRF D F +TIG F +T++V+ K IWDTAGQER Sbjct: 17 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 76 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN-MVMALAGNKSDLLDA 130 + +L P YYRGA I+V+DVT + +F + W+ EL+ N +V L GNK D + Sbjct: 77 FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KEN 135 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPTEN 179 R+V + +A+++ + F+E SAKT V+ F E+ ++ P + +EN Sbjct: 136 REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN 187 >4RKF-A nrPDB Length = 190 Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 94/163 (57%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 AA N KL+++G+ GK+S + R+ D F ST+G F +T+ +D VK Sbjct: 15 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 74 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 +IWDTAG ERY ++ YYRGA I+++DVTN+ SF + WV +++ N + L Sbjct: 75 QIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILV 134 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 GNK D+ D R ++ E + A + G+ F ETSAK NVK +F Sbjct: 135 GNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVF 177 >3RAB-A nrPDB Length = 169 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 59/153 (38%), Positives = 89/153 (58%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G+ GK+S + R+ D F ST+G F +T+ ND +K +IWDTAGQER Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA I+++D+TN+ SF + W +++ N + L GNK D+ D R Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER 126 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 V++E + A G F E SAK NVK+ F Sbjct: 127 VVSSERGRQLADHLGFEFFEASAKDNINVKQTF 159 >2OCB-A nrPDB Length = 180 Score = 123 bits (309), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 6/174 (3%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 KS+ K++LLGD G GKSSL+ R+V ++F TIG F ++ L V+ V +IWDT Sbjct: 4 KSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDT 63 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVMALAG 122 AGQER+ SL +YRGA ++ F V ++ SFE W +E + + + G Sbjct: 64 AGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLG 123 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRLPRVQ 175 NK D D R+VT E+AQT+ ENG + ++ETSAK TNV F E R++ V+ Sbjct: 124 NKVDKED-RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVE 176 >4PHF-A nrPDB Length = 184 Score = 122 bits (307), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 99/167 (59%), Gaps = 11/167 (6%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN-DATVKFEIWDTAGQE 70 K+++LGD G GK+SL+ R+V D++ ++TIGA F ++ + V+ D ++WDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 71 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN----MVMALAGNKSD 126 R+ SL +YRGA ++V+DVTN +SFE K W E N N + GNK D Sbjct: 72 RFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKID 131 Query: 127 LLDARKVTAE-DAQTYAQENG---LFFMETSAKTATNVKEIFYEIAR 169 +++K+ +E AQ A+ G LF TSAK A NV F EIAR Sbjct: 132 AEESKKIVSEKSAQELAKSLGDIPLFL--TSAKNAINVDTAFEEIAR 176 >4FMC-F nrPDB Length = 117 Score = 122 bits (306), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 55/115 (47%), Positives = 76/115 (66%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 L+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+K +IWDTAGQER+ Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL 127 ++ YYRGA I+V+DVT+Q SF K+W+QE+ + N+ L GNK DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 115 >2IL1-A nrPDB Length = 192 Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 96/158 (60%), Gaps = 1/158 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G G GK+SL+ RF D F E +ST+G F +T+ + ++ +IWDTAGQER Sbjct: 28 QVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQER 87 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 ++S+ YYR A I+V+D+T + +F+ KW++ + + + + L GNK D R Sbjct: 88 FNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDR 147 Query: 132 KVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIA 168 ++T + + +AQ+ G+ F E SAK NV EIF ++ Sbjct: 148 EITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLV 185 >1ZBD-A nrPDB Length = 203 Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 58/153 (37%), Positives = 88/153 (57%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G+ GK+S + R+ D F ST+G F +T+ ND +K +IWDTAG ER Sbjct: 10 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLER 69 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 Y ++ YYRGA I+++D+TN+ SF + W +++ N + L GNK D+ D R Sbjct: 70 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDER 129 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 V++E + A G F E SAK NVK+ F Sbjct: 130 VVSSERGRQLADHLGFEFFEASAKDNINVKQTF 162 >3DZ8-A nrPDB Length = 191 Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 91/160 (56%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GN KL+++G+ GK+S + R+ D F ST+G F +T+ ++ VK +IW Sbjct: 18 GNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 77 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DTAGQERY ++ YYRGA I+++D+TN+ SF + W +++ N + L GNK Sbjct: 78 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNK 137 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 D+ + R V E Q A++ G F E SAK +V++ F Sbjct: 138 CDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAF 177 >6IYB-A nrPDB Length = 199 Score = 117 bits (294), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 7/174 (4%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 M + K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V Sbjct: 4 MGSTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 63 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NM 116 +IWDTAG ER+ S +YRGA ++VFDVT +F+ W E Q +P N Sbjct: 64 MQIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 122 Query: 117 VMALAGNKSDLLDARKVTAEDAQTYA-QENGLFFMETSAKTATNVKEIFYEIAR 169 + GNK D L+ R+V + AQ + +N + + ETSAK A NV++ F IAR Sbjct: 123 PFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 175 >1WMS-A nrPDB Length = 177 Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 68/173 (39%), Positives = 101/173 (58%), Gaps = 7/173 (4%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 AG S+ K++LLGD G GKSSL+ R+V ++F TIG F ++ L V+ V +I Sbjct: 2 AGKSSL-FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVMA 119 WDTAGQER+ SL +YRG+ ++ F V + SF+ W +E + + Sbjct: 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120 Query: 120 LAGNKSDLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRL 171 + GNK D+ + R+V+ E+AQ + ++NG + + ETSAK ATNV F E RR+ Sbjct: 121 ILGNKIDISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 172 >6HUF-A nrPDB Length = 182 Score = 116 bits (291), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 9/179 (5%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + G+ K + LGD G GK+S++ ++ +F +T+G F +T+ ND +K Sbjct: 1 GSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG---NPNMVM 118 ++WDTAG ER+ SL ++R A +++FD+TN+ SF + W+ +L+ NP++V Sbjct: 61 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPDIV- 119 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE----IFYEIARRLPR 173 L GNKSDL D R V A +A+ A+ G+ + ETSA TN+ + + I +R+ R Sbjct: 120 -LCGNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKRMER 177 >4QXA-A nrPDB Length = 208 Score = 116 bits (291), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 66/173 (38%), Positives = 101/173 (58%), Gaps = 7/173 (4%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 AG S+ K++LLGD G GKSSL+ R+V ++F TIG F ++ L V+ V +I Sbjct: 3 AGKSSL-FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQI 61 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVMA 119 WDTAG ER+ SL +YRG+ ++ F V + SF+ W +E + + Sbjct: 62 WDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 121 Query: 120 LAGNKSDLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRL 171 + GNK+D+ + R+V+ E+AQ + ++NG + + ETSAK +TNV F E RR+ Sbjct: 122 ILGNKTDIKE-RQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRI 173 >1Z22-A nrPDB Length = 168 Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 93/159 (58%), Gaps = 1/159 (0%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+V++G+ GKSS++ R+ K F + + TIG F + + VND V+ +WDTAGQE Sbjct: 7 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + ++ YYRGA A ++VF T++ SFE W +++ A+ ++ AL NK DLLD Sbjct: 67 FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-DIPTALVQNKIDLLDDS 125 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARR 170 + E+A+ A+ L F TS K NV E+F +A + Sbjct: 126 CIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEK 164 >2P5S-A nrPDB Length = 199 Score = 113 bits (282), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 6/168 (3%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+VL GD GKSS ++R K++F E +T+G F +TL V+ ++WDTAGQER Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQER 89 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDA- 130 + S+A Y+R A ++++DVT + SF ++WV ++ + + + L GNK+D+ D Sbjct: 90 FRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDTA 149 Query: 131 -----RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 + V + A G F ETSAK +N+ E +AR + + Sbjct: 150 ATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKK 197 >1Z06-A nrPDB Length = 189 Score = 112 bits (281), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 5/176 (2%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + G++S K++++GD GK+ L RF +F + E+TIG F + + ++ +K Sbjct: 11 LVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIK 70 Query: 61 FEIWDTAGQERYH-SLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMV-M 118 ++WDTAGQER+ S+ YYR A + V+D+TN ASF W++E + N + Sbjct: 71 IQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPR 130 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTAT---NVKEIFYEIARRL 171 L GNK DL A +V + AQ +A + + ETSAK +V+ IF +A +L Sbjct: 131 ILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 186 >2G77-B nrPDB Length = 198 Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/165 (35%), Positives = 92/165 (55%), Gaps = 5/165 (3%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++GD GK+ L RF +F + E+TIG F + + ++ +K ++WDTAGQER Sbjct: 31 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 90 Query: 72 YH-SLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMV-MALAGNKSDLLD 129 + S+ YYR A + V+D+TN ASF W++E + N + L GNK DL Sbjct: 91 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRS 150 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTAT---NVKEIFYEIARRL 171 A +V + AQ +A + + ETSAK +V+ IF +A +L Sbjct: 151 AIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 195 >5UWI-A nrPDB Length = 237 Score = 110 bits (275), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 111/199 (55%), Gaps = 7/199 (3%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAA G + KLVL+GD G GK++ V R + +F + +T+G N +K Sbjct: 22 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 81 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F +WDTAGQE++ L YY A AII+FDVT++ +++ W ++L + N+ + L Sbjct: 82 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVL 140 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPT 177 GNK D+ D RKV A+ + ++N L + + SAK+ N ++ F +AR+L P ++ Sbjct: 141 CGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV 198 Query: 178 ENPTGMVLPDRAMDRAVSS 196 P + P+ MD A+++ Sbjct: 199 AMP-ALAPPEVVMDPALAA 216 >2N1B-A nrPDB Length = 261 Score = 110 bits (274), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 111/199 (55%), Gaps = 7/199 (3%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAA G + KLVL+GD G GK++ V R + +F + +T+G N +K Sbjct: 42 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 101 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F +WDTAGQE++ L YY A AII+FDVT++ +++ W ++L + N+ + L Sbjct: 102 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVL 160 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPT 177 GNK D+ D RKV A+ + ++N L + + SAK+ N ++ F +AR+L P ++ Sbjct: 161 CGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV 218 Query: 178 ENPTGMVLPDRAMDRAVSS 196 P + P+ MD A+++ Sbjct: 219 AMPA-LAPPEVVMDPALAA 236 >5CLL-A nrPDB Length = 191 Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/171 (36%), Positives = 98/171 (57%), Gaps = 3/171 (1%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAA G + KLVL+GD G GK++ V R + +F + +T+G N +K Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 60 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F +WDTAGQE++ L YY A AII+FDVT++ +++ W ++L + N+ + L Sbjct: 61 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVL 119 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 GNK D+ D RKV A+ + ++N L + + SAK+ N ++ F +AR+L Sbjct: 120 CGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 168 >5CM8-B nrPDB Length = 203 Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 63/183 (34%), Positives = 108/183 (59%), Gaps = 5/183 (2%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G G GKS+L L+F+ D+FVE E T A + + + ++ V+ +I DTAGQE Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQED 73 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDA 130 Y ++ Y+R + VF +T+ SF+ +++ ++ L+ + + ++ L GNK DL D Sbjct: 74 YAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDK 133 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAM 190 RKV + Q AQ+ + ++ETSAKT NV ++F+++ R + R + TE+ RA Sbjct: 134 RKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREI-RSRKTEDSKAT--SGRAK 190 Query: 191 DRA 193 DR Sbjct: 191 DRC 193 >2F7S-A nrPDB Length = 217 Score = 106 bits (264), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 15/173 (8%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA----- 57 +G+ KL+ LGD G GK++ + R+ ++F +T+G F + + N Sbjct: 18 GSGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 77 Query: 58 -----TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG 112 V ++WDTAGQER+ SL ++R A +++FD+T+Q SF + W+ +LQA Sbjct: 78 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 137 Query: 113 ---NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 162 NP++V L GNK+DL D R+V A+ A + G+ + ETSA T NV++ Sbjct: 138 YCENPDIV--LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 188 >4DXA-A nrPDB Length = 169 Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 97/164 (59%), Gaps = 3/164 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLV+LG VG GKS+L ++FV+ FVE + TI ++ Q + V+ EI DTAG E+ Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDAQQCMLEILDTAGTEQ 65 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDA 130 + ++ +Y + +V+ +T Q++F + ++ L+ + ++ M L GNK DL D Sbjct: 66 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDE 125 Query: 131 RKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIARRLPR 173 R V E Q A++ N F+E+SAK+ NV EIFY++ R++ R Sbjct: 126 RVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR 169 >5XC3-A nrPDB Length = 176 Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 99/171 (57%), Gaps = 4/171 (2%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFS-QTLAVNDATVKFEIWDTAGQE 70 K++L+G G GKSS+V +F+ ++ + TIGAAF S Q +A N T+K IWDTAGQE Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQE 66 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL-LD 129 R+ S+ MYY + ++VFDVT++ SF+ W+ +L+ + + + NK D+ + Sbjct: 67 RFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDIDKN 126 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 +V+ + + + ++N ++ S+ + V +F ++ ++ ++ NP Sbjct: 127 NWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKMIDKMSEIKI--NP 175 >2KE5-A nrPDB Length = 174 Score = 102 bits (255), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 105/170 (61%), Gaps = 3/170 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G G GKS+L L+F+ D+FVE E T A + + + ++ V+ +I DTAG E Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGLED 63 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMV-MALAGNKSDLLD 129 Y ++ Y+R ++VF +T SF ++ ++ L+ + + + + + GNKSDL + Sbjct: 64 YAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEE 123 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 R+V E+A++ A+E G+ ++ETSAKT NV ++F+++ R + + +EN Sbjct: 124 RRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSEN 173 >2IEZ-A nrPDB Length = 220 Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 104/187 (55%), Gaps = 20/187 (10%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA----------TVKF 61 KL+ LGD G GK++ + R+ ++F +T+G F + + + V Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG---NPNMVM 118 ++WDTAG ER+ SL ++R A +++FD+T+Q SF + W+ +LQA NP++V Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV- 131 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE----IFYEIARRLPR- 173 L GNK+DL D R+V A+ A++ G+ + ETSA T NV++ + I +R+ + Sbjct: 132 -LIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRMEKC 190 Query: 174 VQPTENP 180 V+ T+ P Sbjct: 191 VEKTQVP 197 >1ZC4-A nrPDB Length = 175 Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 98/161 (60%), Gaps = 2/161 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G G GKS+L L+F+ D+FVE E T A + + + ++ V+ +I DTAG E Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGLED 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDA 130 Y ++ Y+R + VF +T SF + ++ L+ + + N+ L GNKSDL D Sbjct: 67 YAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDK 126 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 R+V+ E+A+ A++ + ++ETSAKT NV ++F+++ R + Sbjct: 127 RQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 167 >2IEY-A nrPDB Length = 195 Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 95/171 (55%), Gaps = 15/171 (8%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA------- 57 G+ KL+ LGD G GK++ + R+ ++F +T+G F + + + Sbjct: 6 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASG 65 Query: 58 ---TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG-- 112 V ++WDTAG ER+ SL ++R A +++FD+T+Q SF + W+ +LQA Sbjct: 66 KAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 125 Query: 113 -NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 162 NP++V L GNK+DL D R+V A+ A++ G+ + ETSA T NV++ Sbjct: 126 ENPDIV--LIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEK 174 >3BC1-A nrPDB Length = 195 Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 15/169 (8%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN--------- 55 G+ K + LGD G GK+S++ ++ +F +T+G F + + Sbjct: 6 GDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVG 65 Query: 56 -DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG-- 112 + ++WDTAG ER+ SL ++R A +++FD+TN+ SF + W+ +LQ Sbjct: 66 RGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYS 125 Query: 113 -NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNV 160 NP++V L GNKSDL D R V E+A+ A++ G+ + ETSA TN+ Sbjct: 126 ENPDIV--LCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNI 172 >4M8N-E nrPDB Length = 199 Score = 100 bits (248), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 95/162 (58%), Gaps = 3/162 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLV+LG G GKS+L ++FV+ FVE + TI ++ Q + V+ EI DTAG E+ Sbjct: 8 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDAQQCMLEILDTAGTEQ 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDA 130 + ++ +Y + +V+ +T Q++F + ++ L+ + ++ M L GNK DL D Sbjct: 67 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDE 126 Query: 131 RKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIARRL 171 R V E Q A++ N F+E+SAK+ NV EIFY++ R++ Sbjct: 127 RVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >3WYF-A nrPDB Length = 219 Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 3/169 (1%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 AA + KLVL+GD G GK++ V R + +F + +TIG + N +KF+ Sbjct: 5 AANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFD 64 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 +WDTAG E++ L YY A AII+FDVT++ +++ W ++L + N+ + L G Sbjct: 65 VWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCG 123 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 NK D+ + RKV A+ T+ ++ L + + SAK+ N ++ F +AR+L Sbjct: 124 NKVDVKE-RKVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >5XOJ-A nrPDB Length = 182 Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 100/172 (58%), Gaps = 6/172 (3%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLVL+GD G GK++ V R + +F + +TIG + N +KF++WDTAG E+ Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLEK 73 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 + L YY A AII+FDVT++ +++ W ++L + N+ + L GNK D+ + R Sbjct: 74 FGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-R 131 Query: 132 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPTENP 180 KV A+ T+ ++ L + + SAK+ N ++ F +AR+L P+++ +P Sbjct: 132 KVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASP 182 >2ATV-A nrPDB Length = 196 Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 4/169 (2%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 KS KL + G G GKS+LV+RF+ +F+ + T+ + + Q ++D V EI DT Sbjct: 25 KSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQA-TIDDEVVSMEILDT 83 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP-NMVMALAGNKS 125 AGQE + R ++V+D+T++ SFE L P N+ + L GNK+ Sbjct: 84 AGQEDTIQREG-HMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKA 142 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTAT-NVKEIFYEIARRLPR 173 DL +R+V+ E+ + A E F E SA T N+ EIFYE+ R + R Sbjct: 143 DLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRR 191 >5C2K-A nrPDB Length = 415 Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 93/183 (50%), Gaps = 17/183 (9%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 ++G +I KLV++GD GK+ L++ F KDQF E T+ + + + V+ V+ Sbjct: 4 GSSGMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVEL 62 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMAL 120 +WDTAGQE Y L P+ Y ++ F + + S E +KW E++ PN+ + L Sbjct: 63 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIIL 121 Query: 121 AGNKSDL------------LDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEI 167 GNK DL + V E+ + A G F +ME SAKT V+E+F E+ Sbjct: 122 VGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF-EM 180 Query: 168 ARR 170 A R Sbjct: 181 ATR 183 >4KU4-A nrPDB Length = 206 Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 20/186 (10%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 + G I K+ +LG+ G GK+SL + K F E + T+ ++ Q + ++ E Sbjct: 7 SPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCV-IDGIPSHLE 65 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL--------QAQGNP 114 I DTAGQE Y +L + R +IVFDVT ++SFE A++ +E+ + + +P Sbjct: 66 ILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHP 125 Query: 115 N-----------MVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEI 163 ++ L GNK DL R+V + + A++ G F+ETSAK TNV+E Sbjct: 126 GDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEEA 185 Query: 164 FYEIAR 169 F+ + R Sbjct: 186 FFSVVR 191 >4DJT-A nrPDB Length = 218 Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 1/164 (0%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV-KFEIWD 65 + + K+ L+GD G GK++ + R + +F + +T+GA T + V KF +WD Sbjct: 8 RELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWD 67 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQE+ L +YY GA+ AI+ FDVT++ + + +WV+E QA + + NK Sbjct: 68 TAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKI 127 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 D+ + +K++ + + + E SAKTA N F +AR Sbjct: 128 DIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLAR 171 >5ZHX-e nrPDB Length = 198 Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 17/177 (9%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 +I KLV++GD GK+ L++ F KDQF E T+ + + + V+ V+ +WDTA Sbjct: 8 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTA 66 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSD 126 GQE Y L P+ Y ++ F + + S E +KW E++ PN+ + L GNK D Sbjct: 67 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 125 Query: 127 L------------LDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARR 170 L + V E+ + A G F +ME SAKT V+E+F E+A R Sbjct: 126 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF-EMATR 181 >2ERY-A nrPDB Length = 172 Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 89/154 (57%), Gaps = 2/154 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++F++ FV + TI ++ Q + ++D + +I DTAGQE + ++ Y R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCV-IDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 83 AAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 ++VF VT++ SFE K+ ++ L+ + M L GNK+DL R+VT E+ Q Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQL 136 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 A++ + +ME SAK NV + F+E+ R + + Q Sbjct: 137 ARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQ 170 >4KLZ-A nrPDB Length = 173 Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 2/163 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KLV+LG G GKS++ ++F+ +F E + TI A+ + ++D +I DTAGQ Sbjct: 7 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAY-KIRIRIDDEPANLDILDTAGQAE 65 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDA 130 + ++ Y R II + +T++ SF +++ Q + + + + + L GNKSDL Sbjct: 66 FTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQL 125 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 R+VT E+ A+E F ETSA + ++F+ + R + R Sbjct: 126 RQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRR 168 >3E5H-A nrPDB Length = 178 Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 4/161 (2%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV-NDATVKFEIWDTAGQE 70 K+V+LGD +GK+SL F ++ F + + TIG FF + + + + V +IWD GQ Sbjct: 8 KIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQT 67 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKW---VQELQAQGNPNMVMALAGNKSDL 127 + Y GA ++V+D+TN SFE + W V+++ + ++AL GNK DL Sbjct: 68 IGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKIDL 127 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIA 168 R + E + QENG SAKT +V F ++A Sbjct: 128 EHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVA 168 >4CZ2-A nrPDB Length = 230 Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 13/200 (6%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70 K++++G++G GK+S++ R+V F + +TIG F + L + T V+ ++WD AG E Sbjct: 32 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 91 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKS 125 R+ ++ +YY+ A A +VFD++ ++FE KW +L ++ G+P + LA NK Sbjct: 92 RFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA-NKC 150 Query: 126 DLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKE-IFYEIARRLPRVQP---TENP 180 D ++ + +E+G + ETSAK N++E + + + L Q EN Sbjct: 151 DQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSFPNEEND 210 Query: 181 TGMVLPDRAMDRAVSSS-CC 199 + D+ RA + S CC Sbjct: 211 VDKIKLDQETLRAENKSQCC 230 >5JCP-B nrPDB Length = 419 Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 17/177 (9%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 +I KLV++GD GK+ L++ KDQF E T+ + + + V+ V+ +WDTA Sbjct: 241 AIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTA 299 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSD 126 GQE Y L P+ Y ++ F + + S E +KW E++ PN+ + L GNK D Sbjct: 300 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 358 Query: 127 L------------LDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARR 170 L + V E+ + A G F +ME SAKT V+E+F E+A R Sbjct: 359 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF-EMATR 414 >2J0V-A nrPDB Length = 212 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K V +GD GK+ +++ + ++F I F FS +AV+ V +WDTAGQ Sbjct: 11 KCVTVGDGAVGKTCMLICYTSNKF---PTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQ 67 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ YRGA ++ F + ++AS+E KKW+ EL+ + PN+ + L G K DL Sbjct: 68 EDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELR-RFAPNVPIVLVGTKLDLR 126 Query: 129 DARKVTAEDAQTYAQENG---------LFFMETSAKTATNVKEIF 164 D + A+ G ++E S+KT NVK +F Sbjct: 127 DDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVF 171 >6FF8-A nrPDB Length = 181 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 8/158 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 70 K++++G++G GK+S++ R+V F + +TIG F + L + T V+ ++WD AG E Sbjct: 10 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 69 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKS 125 R+ ++ +YY+ A A +VFD++ ++FE KW +L ++ G+P + LA NK Sbjct: 70 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA-NKC 128 Query: 126 DLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKE 162 D + + +E+G + ETSAK N++E Sbjct: 129 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 166 >3BWD-D nrPDB Length = 182 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 14/165 (8%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K V +GD GK+ L++ + + F T+ F S + VN ATV +WDTAGQE Sbjct: 10 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGATVNLGLWDTAGQED 68 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLLDA 130 Y+ L P+ YRGA I+ F + ++AS+E +KKW+ EL+ P + + L G K DL D Sbjct: 69 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIVLVGTKLDLRDD 127 Query: 131 RK-----------VTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 ++ T + + ++E S+K+ NVK +F Sbjct: 128 KQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVF 172 >5WDR-A nrPDB Length = 171 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/152 (30%), Positives = 84/152 (55%), Gaps = 2/152 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ ++ FV + TI ++ + ++++D +I DTAGQE Y ++ Y R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSY-RKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRT 78 Query: 83 AAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + V+ + +Q S + + ++ L+ + + M L GNK DL + R+V+ E Q Sbjct: 79 GEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMILVGNKCDLEEHREVSTEAGQAV 138 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 A+ + FMETSAK NV+E FY++ R + + Sbjct: 139 AKSYSIPFMETSAKKRINVEEAFYQLVREIRK 170 >2NTY-C nrPDB Length = 180 Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 14/165 (8%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K V +GD GK+ +++ + + F T+ F S + V+ TV +WDTAGQE Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQED 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLLDA 130 Y+ L P+ YRGA I+ F + ++AS+E AKKW+ EL+ P + + L G K DL D Sbjct: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDD 125 Query: 131 RK----------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 164 ++ +T + + G ++E S+KT NVK +F Sbjct: 126 KQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVF 170 >2WBL-C nrPDB Length = 180 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 14/165 (8%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE Sbjct: 8 KCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLLDA 130 Y+ L P+ YRGA ++ F + ++AS+E KKW+ EL+ P + + L G K DL D Sbjct: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYA-PGIPIVLVGTKLDLRDD 125 Query: 131 RK-----------VTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 ++ TA+ + + ++E S+KT NVK +F Sbjct: 126 KQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVF 170 >5WDQ-A nrPDB Length = 170 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 3/150 (2%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQ-VVIDGETCLLDILDTAGQEEYSAMRDQYMRT 78 Query: 83 AAAAIIVFDVTNQASFERAKKWVQELQ-AQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SFE ++ ++++ + + ++ M L GNK D AR V + AQ Sbjct: 79 GEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDAA-ARTVESRQAQDL 137 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRL 171 A+ G+ ++ETSAKT V++ FY + R + Sbjct: 138 ARSYGIPYIETSAKTRQGVEDAFYTLVREI 167 >2FV8-A nrPDB Length = 207 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 16/170 (9%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 I KLV++GD GK+ L++ F KD+F E T+ + + + V+ V+ +WDTAG Sbjct: 24 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAG 82 Query: 69 QERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDL 127 QE Y L P+ Y ++ F V + S E +KWV E++ PN+ + L NK DL Sbjct: 83 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDL 141 Query: 128 LDARKVTAEDAQTYAQ----ENG---------LFFMETSAKTATNVKEIF 164 V E A+ + ++G ++E SAKT V+E+F Sbjct: 142 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 191 >4WA7-A nrPDB Length = 170 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 84/152 (55%), Gaps = 3/152 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAG E Y ++ Y R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQ-VVIDGETCLLDILDTAGLEEYSAMRDQYMRT 75 Query: 83 AAAAIIVFDVTNQASFERAKKWVQELQ-AQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SFE + ++++ + + ++ M L GNK DL +R V + AQ Sbjct: 76 GEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQDL 134 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 A+ G+ F+ETSAKT V + FY + R + + Sbjct: 135 ARSYGIPFIETSAKTRQGVDDAFYTLVREIRK 166 >2ERX-A nrPDB Length = 172 Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 3/158 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 ++ + G G GKSSLVLRFVK F E T+ + Q ++ + + +I DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTY-RQVISCDKSICTLQITDTTGSHQ 63 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMV-MALAGNKSDLLD 129 + ++ + A I+V+ +T++ S E K +++ + +G+ + + L GNK D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESP 123 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 +R+V + +A+ A+ FMETSAK NVKE+F E+ Sbjct: 124 SREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQEL 161 >3RAP-R nrPDB Length = 167 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 2/150 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++FV F+E + TI F+ + + V+ + EI DTAG E++ S+ +Y + Sbjct: 16 KSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 83 AAAAIIVFDVTNQASFERAKKWV-QELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 I+V+ + NQ SF+ K Q ++ + + + L GNK DL R+V++ + + Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRAL 134 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRL 171 A+E G FMETSAK+ T V E+F EI R++ Sbjct: 135 AEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 >5UHV-A nrPDB Length = 166 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 3/150 (2%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQ-VVIDGETCLLDILDTAGQEEYSAMRDQYMRT 74 Query: 83 AAAAIIVFDVTNQASFERAKKWVQELQ-AQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SF + ++++ + + ++ M L GNK D L R V + A Sbjct: 75 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCD-LPTRTVDTKQAHEL 133 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRL 171 A+ G+ F+ETSAKT V++ FY + R + Sbjct: 134 AKSYGIPFIETSAKTRQGVEDAFYTLVREI 163 >3CON-A nrPDB Length = 190 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 3/150 (2%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQ-VVIDGETCLLDILDTAGQEEYSAMRDQYMRT 92 Query: 83 AAAAIIVFDVTNQASFERAKKWVQELQ-AQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SF + ++++ + + ++ M L GNK D L R V + A Sbjct: 93 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCD-LPTRTVDTKQAHEL 151 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRL 171 A+ G+ F+ETSAKT V++ FY + R + Sbjct: 152 AKSYGIPFIETSAKTRQGVEDAFYTLVREI 181 >4U5X-A nrPDB Length = 178 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 18/167 (10%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K V +GD GK+ +++ + ++F I F FS ++V+ + V +WDTAG Sbjct: 7 KCVTVGDGAVGKTCMLICYTSNKF---PTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGL 63 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ YRGA I+ F + ++AS+E KKW+ EL+ + P + + L G K DL Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELR-RFAPGVPVVLVGTKLDLR 122 Query: 129 DARK----------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 164 + R +T E + + G + ++E S+KT N+K +F Sbjct: 123 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVF 169 >2J1L-A nrPDB Length = 214 Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 18/181 (9%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 A G +S+ K+VL+GD G GK+SL++ F F E T+ + L V V Sbjct: 28 APPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHL 84 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMAL 120 IWDTAGQ+ Y L P++Y A+ ++ FDVT+ SF+ +W E+ + + + Sbjct: 85 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIV 143 Query: 121 AGNKSDLLDARK------------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEI 167 G K+DL + VT Q A+ G + ++E SA+ NV +F E Sbjct: 144 VGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 203 Query: 168 A 168 A Sbjct: 204 A 204 >2FN4-A nrPDB Length = 181 Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 2/159 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++F++ FV + TI ++ ++ +V+ + +I DTAGQE + ++ Y R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSY-TKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 83 AAAAIIVFDVTNQASF-ERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 ++VF + ++ SF E K + Q L+ + + + L GNK+DL R+V +A + Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAF 140 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 + + + E SAK NV E F ++ R + + Q E P Sbjct: 141 GASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELP 179 >3OES-A nrPDB Length = 201 Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 2/165 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K+V+LG GK+SL +FV+ +F E + T+ + S+ + + + DTAGQ+ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTY-SKIVTLGKDEFHLHLVDTAGQDE 84 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDA 130 Y L + G ++V+ VT+ SF+ + Q+L + G + + L GNK+DL Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSPE 144 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 R+V A + + A+ G FME+SA+ + IF ++ + + RV+ Sbjct: 145 REVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIARVE 189 >2ATX-A nrPDB Length = 194 Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 16/178 (8%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 A G ++ K V++GD GK+ L++ + D F E T+ ++ ++ V Sbjct: 11 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLG 69 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALA 121 ++DTAGQE Y L P+ Y +I F V N ASF+ K +WV EL+ PN+ L Sbjct: 70 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLI 128 Query: 122 GNKSDLLDARK------------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYE 166 G + DL D K + E Q A+E G ++E SA T +K +F E Sbjct: 129 GTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDE 186 >3A58-B nrPDB Length = 188 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 20/180 (11%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 M+ SI KLV++GD GK+ L++ K QF E T+ + + + V+ V+ Sbjct: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVAD-VEVDGRRVE 59 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQ--AQGNPNMV 117 +WDTAGQE Y L P+ Y + +I F + S E + KW+ E+ QG P Sbjct: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVP--- 116 Query: 118 MALAGNKSDLLD------------ARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 164 + L G K DL + + VT+++ Q+ A + G + E SAKT V+E+F Sbjct: 117 IILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 >3PIR-A nrPDB Length = 183 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 3/149 (2%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++F + FV + TI ++ T N + ++ DTAGQE + ++ Y R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAI-LDVLDTAGQEEFSAMREQYMRT 89 Query: 83 AAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 +IV+ VT++ASFE ++ Q L+ + + M L NK DL+ RKVT + + Sbjct: 90 GDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEM 149 Query: 142 AQENGLFFMETSAK-TATNVKEIFYEIAR 169 A + + ++ETSAK NV + F+++ R Sbjct: 150 ATKYNIPYIETSAKDPPLNVDKTFHDLVR 178 >2Q3H-A nrPDB Length = 201 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 20/169 (11%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K VL+GD GK+SLV+ + + + I AF FS ++V+ V+ ++ DTAGQ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGY---PTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQ 78 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDL- 127 + + L P+ Y ++ F V + +SF+ ++KWV E++ P + L G +SDL Sbjct: 79 DEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHC-PKAPIILVGTQSDLR 137 Query: 128 --------LDARK---VTAEDAQTYAQE-NGLFFMETSAKTATNVKEIF 164 LD K V E A+ A+E ++E SA T N+KE+F Sbjct: 138 EDVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVF 186 >1GWN-A nrPDB Length = 205 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 3/123 (2%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 N+++ K+V++GD GK++L+ F KD F E T+ + + + ++ ++ +WD Sbjct: 24 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLWD 82 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNK 124 T+G Y ++ P+ Y + A +I FD++ + + KKW E+Q + PN M L G K Sbjct: 83 TSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ-EFCPNTKMLLVGCK 141 Query: 125 SDL 127 SDL Sbjct: 142 SDL 144 >1M7B-A nrPDB Length = 184 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 3/125 (2%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 N+++ K+V++GD GK++L+ F KD F E T+ + + + ++ ++ + Sbjct: 1 GSNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSL 59 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAG 122 WDT+G Y ++ P+ Y + A +I FD++ + + KKW E+Q + PN M L G Sbjct: 60 WDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ-EFCPNTKMLLVG 118 Query: 123 NKSDL 127 KSDL Sbjct: 119 CKSDL 123 >3T5G-A nrPDB Length = 181 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 21/196 (10%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 +S + K+ +LG GKSSL ++FV+ QFV+ + TI F++ + VN ++ DT Sbjct: 3 QSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENT-FTKLITVNGQEYHLQLVDT 61 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKS 125 AGQ+ Y Y I+V+ VT+ SFE K + L G + + L GNK Sbjct: 62 AGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKK 121 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVL 185 DL R ++ E+ + A+ F+E+SAK ++F RR+ +L Sbjct: 122 DLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVF----RRI------------IL 165 Query: 186 PDRAMDRAVS---SSC 198 MD A S SSC Sbjct: 166 EAEKMDGACSQGKSSC 181 >2CJW-A nrPDB Length = 192 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 11/185 (5%) Query: 12 KLVLLGDVGAGKSSLVLRF--VKDQFVEFQESTIGAAFFSQTLAVNDAT---VKFEIWDT 66 ++VL+G+ G GKS+L F V D ++ +G + +TL V+ + + ++W+ Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDS-MDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 66 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKW-VQELQAQGNPNMVMALAGNKS 125 G+ + L + A +IV+ +T++ASFE+A + +Q +A+ ++ + L GNKS Sbjct: 67 KGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 124 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR--RLPRVQPTENPTGM 183 DL+ R+V+ + + A F+ETSA NVKE+F I R RL R +N + Sbjct: 125 DLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKNERRL 184 Query: 184 VLPDR 188 R Sbjct: 185 AYQKR 189 >2G3Y-A nrPDB Length = 211 Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 94/176 (53%), Gaps = 11/176 (6%) Query: 12 KLVLLGDVGAGKSSLVLRF--VKDQFVEFQESTIGAAFFSQTLAVNDAT---VKFEIWDT 66 ++VL+G+ G GKS+L F V D E +G + +TL V+ + + ++W+ Sbjct: 39 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCE-VLGEDTYERTLMVDGESATIILLDMWEN 97 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKW-VQELQAQGNPNMVMALAGNKS 125 G+ + L + A +IV+ +T++ASFE+A + +Q +A+ ++ + L GNKS Sbjct: 98 KGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 155 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR--RLPRVQPTEN 179 DL+ R+V+ + + A F+ETSA NVKE+F I R RL R +N Sbjct: 156 DLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKN 211 >2GF0-A nrPDB Length = 199 Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 4/147 (2%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KSSLVLRFVK F + TI + Q ++ + + +I DT G ++ ++ + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTY-RQVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 83 AAAAIIVFDVTNQASFERAKKWVQEL-QAQGN-PNMVMALAGNKSDLLDARKVTAEDAQT 140 A I+VF VT++ S E + + Q +G+ ++ + L GNK D R+V +AQ Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQ-REVDTREAQA 138 Query: 141 YAQENGLFFMETSAKTATNVKEIFYEI 167 AQE FMETSAK NVKE+F E+ Sbjct: 139 VAQEWKCAFMETSAKMNYNVKELFQEL 165 >2W2X-A nrPDB Length = 185 Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 22/184 (11%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATV 59 + G+++I K V++GDV GK+ L++ + + F I F +S + V+ V Sbjct: 3 GSGGSQAI--KCVVVGDVAVGKTCLLISYTTNAF---PGEYIPTVFDNYSANVMVDSKPV 57 Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVM 118 +WDTAGQE Y L P+ Y +I F + + AS+E + KW E++ P+ + Sbjct: 58 NLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHH-CPSTPI 116 Query: 119 ALAGNKSDLLDAR------------KVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFY 165 L G K DL D + +T A+E + + ++E SA T +K +F Sbjct: 117 ILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFD 176 Query: 166 EIAR 169 E R Sbjct: 177 EAIR 180 >5ZVP-A nrPDB Length = 181 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 20/172 (11%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 I KLV++GD GK+ L++ K F E T+ + + + V+ V+ +WDTAG Sbjct: 4 IRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVAD-VEVDGKHVELALWDTAG 62 Query: 69 QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQ--AQGNPNMVMALAGNKS 125 QE Y L P+ Y + +I F + + S + + KW+ E+ QG P + L G K Sbjct: 63 QEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLP---IILVGCKK 119 Query: 126 DLLDARK------------VTAEDAQTYAQENGLF-FMETSAKTATNVKEIF 164 DL K VT E + ++ G + ++E SA+T V+E+F Sbjct: 120 DLRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVF 171 >3TH5-A nrPDB Length = 204 Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 20/174 (11%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K V++GD GK+ L++ + + F I F +S + V+ V +WDTAGQ Sbjct: 32 KCVVVGDGAVGKTCLLISYTTNAF---PGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 88 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ Y +I F + + ASFE + KW E++ PN + L G K DL Sbjct: 89 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH-CPNTPIILVGTKLDLR 147 Query: 129 DAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIAR 169 D + +T A+E G + ++E SA T +K +F E R Sbjct: 148 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 201 >5VCU-A nrPDB Length = 208 Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 21/187 (11%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K V++GD GK++L++ + F E T+ + ++ + D V ++DTAGQE Sbjct: 13 KCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNY-NKNIPYGDGIVSIALYDTAGQED 71 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDL--- 127 Y L P+ Y ++ F + N S E KW +EL+ NP+ + L G K DL Sbjct: 72 YDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELK-HYNPDTPIVLVGTKLDLKKD 130 Query: 128 ------LDARK---VTAEDAQTYAQE-NGLFFMETSAKTATNVKEIF---YEIA--RRLP 172 L +K VT E Q + ++E SAKT N+ E F +IA +RL Sbjct: 131 EEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQRLK 190 Query: 173 RVQPTEN 179 PT N Sbjct: 191 DAPPTAN 197 >3RYT-C nrPDB Length = 180 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 20/174 (11%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K V++GD GK+ L++ + + F I F +S + V+ V +WDTAG Sbjct: 8 KCVVVGDGAVGKTCLLISYTTNAF---PGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGL 64 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ Y +I F + + ASFE + KW E++ PN + L G K DL Sbjct: 65 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH-CPNTPIILVGTKLDLR 123 Query: 129 DAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIAR 169 D + +T A+E G + ++E SA T +K +F E R Sbjct: 124 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 177 >4MIT-A nrPDB Length = 186 Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 20/180 (11%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT--VK 60 A K + KLV++GD GK+ L++ + +F E I F + +++ T ++ Sbjct: 3 AMSEKPTSIKLVVVGDGAVGKTCLLISY---SIRKFPEDYIPTVFDNYVVSLTAGTRQIQ 59 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMA 119 +WDTAG E Y L P+ Y A+ +I F VT+ S++ KW E+ P + + Sbjct: 60 LALWDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEV-IHFAPKVPII 118 Query: 120 LAGNKSDLLDARKV-------------TAEDAQTYAQENGLFFMETSAKTATNVKEIFYE 166 L G K D + + TA+ + + + ++E SAKT+ N+K +F E Sbjct: 119 LVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDE 178 >2YC4-C nrPDB Length = 208 Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 10/156 (6%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVK--DQFVEFQESTIGAAFFSQTLAVNDATVKFEIW- 64 ++ K+ ++G+ GKS+L+ F +F++ T G + + D TV E++ Sbjct: 18 TLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFL 77 Query: 65 -DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN----MVMA 119 DTAG + Y Y+ G AI+VFDV++ SFE K W EL P+ + Sbjct: 78 LDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWF-ELLKSARPDRERPLRAV 136 Query: 120 LAGNKSDLLDAR-KVTAEDAQTYAQENGLFFMETSA 154 L NK+DL R +V + AQ +A N L F + SA Sbjct: 137 LVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSA 172 >2NZJ-A nrPDB Length = 175 Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 6/157 (3%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN--DAT-VKFEIWDTAG 68 ++VLLGD G GK+SL F Q + E +G + +TL V+ D T V + W+ Sbjct: 6 RVVLLGDPGVGKTSLASLFAGKQERDLHEQ-LGEDVYERTLTVDGEDTTLVVVDTWEAEK 64 Query: 69 QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMV-MALAGNKSDL 127 ++ S +G +A +IV+ + ++ SFE A + +L+ + V + L GNK+DL Sbjct: 65 LDKSWSQESCL-QGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKADL 123 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 R+V+ E+ + A F+ETSA NV E+F Sbjct: 124 ARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELF 160 >2WKQ-A nrPDB Length = 332 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 20/174 (11%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K V++GD GK+ L++ + + F I F +S + V+ V +WDTAG Sbjct: 157 KCVVVGDGAVGKTCLLISYTTNAF---PGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGL 213 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ Y +I F + + ASF + KW E++ PN + L G K DL Sbjct: 214 EDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHC-PNTPIILVGTKLDLR 272 Query: 129 DAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIAR 169 D + +T A+E G + ++E SA T +K +F E R Sbjct: 273 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 326 >3VHL-B nrPDB Length = 195 Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 18/179 (10%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 ++G ++I K V++GD GK+ L++ + ++F T+ + + T+ + Sbjct: 4 GSSGMQTI--KCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMAL 120 ++DTAGQE Y L P+ Y ++ F V + +SFE K KWV E+ P L Sbjct: 61 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLL 119 Query: 121 AGNKSDLLD------------ARKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYE 166 G + DL D + +T E A+ A++ + ++E SA T +K +F E Sbjct: 120 VGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 178 >1RYH-A nrPDB Length = 203 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 39/193 (20%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K V++GD GK+ L++ + + F I F +S + V+ V +WDTAGQ Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAF---PGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 63 Query: 70 ERYHSLAPMYY--------------RG-----AAAAIIVFDVTNQASFERAK-KWVQELQ 109 E Y L P+ Y RG A +I F + + ASFE + KW E++ Sbjct: 64 EDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVR 123 Query: 110 AQGNPNMVMALAGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFMETSAKT 156 PN + L G K DL D + +T A+E G + ++E SA T Sbjct: 124 HH-CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182 Query: 157 ATNVKEIFYEIAR 169 +K +F E R Sbjct: 183 QRGLKTVFDEAIR 195 >2REX-B nrPDB Length = 197 Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 3/118 (2%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 KLVL+GDV GK++++ KD + E T+ + + L + V+ +WDT+G Sbjct: 11 CKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY-TACLETEEQRVELSLWDTSGSP 69 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSDL 127 Y ++ P+ Y + A ++ FD++ + + A KKW E+ P+ + L G K+DL Sbjct: 70 YYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEI-LDYCPSTRVLLIGCKTDL 126 >3REG-A nrPDB Length = 194 Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 10/159 (6%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 69 K+V++GD GK+ L+L F K E + + F FS + + +WDTAGQ Sbjct: 25 KIVVVGDGAVGKTCLLLAFSKG---EIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQ 81 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ Y + ++ F V N+ SF+ + KW E++ + + L G K DL Sbjct: 82 EEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTV-LVGLKVDLR 140 Query: 129 D--ARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIF 164 + VT ++ Q+ G ++E S+ + E+F Sbjct: 141 KDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVF 179 >3Q72-A nrPDB Length = 166 Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 7/163 (4%) Query: 12 KLVLLGDVGAGKSSLVLRF--VKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 K++LLG G GKS+L F V+D E+ + +++ V+ ++D Q Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDG----PEAEAAGHTYDRSIVVDGEEASLMVYDIWEQ 59 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKW-VQELQAQGNPNMVMALAGNKSDLL 128 + L A +IV+ VT++ SFE+A + VQ +A+ ++ + L GNKSDL+ Sbjct: 60 DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLV 119 Query: 129 DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 +R+V+ ++ + A F+ETSA NV+ +F + R++ Sbjct: 120 RSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQI 162 >3CBQ-A nrPDB Length = 195 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 14/175 (8%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK---F 61 G K K++L+G+ G GKS+L F Q E + + + V+ V + Sbjct: 18 GQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVY 77 Query: 62 EIW---DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN--M 116 +IW D G R H L A +IVF VT++ SF + + + L+A G P+ + Sbjct: 78 DIWEQGDAGGWLRDHCLQT-----GDAFLIVFSVTDRRSFSKVPETLLRLRA-GRPHHDL 131 Query: 117 VMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 + L GNKSDL +R+V+ E+ + A +ETSA N +E+F R++ Sbjct: 132 PVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQI 186 >3Q85-A nrPDB Length = 169 Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 14/168 (8%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK---FEIW---D 65 K++L+G+ G GKS+L F Q E + + + V+ V ++IW D Sbjct: 4 KVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQGD 63 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN--MVMALAGN 123 G + H L A +IVF VT++ SF + + + L+A G P+ + + L GN Sbjct: 64 AGGWLQDHCLQT-----GDAFLIVFSVTDRRSFSKVPETLLRLRA-GRPHHDLPVILVGN 117 Query: 124 KSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 KSDL +R+V+ E+ + A +ETSA N +E+F R++ Sbjct: 118 KSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQI 165 >5C1S-A nrPDB Length = 391 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 12/153 (7%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G K I +L+++G G GK++L D F E +S G + + +++ ++ I Sbjct: 59 GKKEI--RLLVVGSSGVGKTTLC-----DCFFESHQSQ-GEETREKHVQIDNDFIRISIS 110 Query: 65 DTAGQERYHSLA-PMYYRGAAAAIIVFDVTNQASFERAKK-WVQELQAQGNPNMVMALAG 122 D AGQ+ +++ P Y G A ++++D+T SF K W+ ++ N + + + G Sbjct: 111 DIAGQQSFYACDNP--YDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIG 168 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAK 155 NK D R +T ++A+ +AQ+ F E S K Sbjct: 169 NKKDQEIDRIITRKEAEQFAQDRLCQFYEISTK 201 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 12/172 (6%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQ-TLAVNDATVKFEIW--D 65 I +++++GD GK++ + +F Q+ T G F + T +K+EI D Sbjct: 221 IKIRMLMVGDQNVGKTTFIRKFA------LQDPT-GHDFMNAITTRFEMEKIKYEIIMID 273 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 + P R A +IV+D+TN+ SF+ + L ++ + G K+ Sbjct: 274 WGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKT 333 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR--RLPRVQ 175 DL RK+T DA T A G ++E S+K + I +A R+ R++ Sbjct: 334 DLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIRINRLK 385 >4ILE-A nrPDB Length = 184 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 14/156 (8%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +L L+G +GK++ V QF E T+G F + + + T+K +WD GQ R Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG--FNMRKITKGNVTIK--LWDIGGQPR 79 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVMALAGNKSDL 127 + S+ Y RG +A + + D +Q E +K + L Q QG P +V+ GNK DL Sbjct: 80 FRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVL---GNKRDL 136 Query: 128 ---LDARKVTAEDAQTYAQENGLFFMETSAKTATNV 160 LD +++ + + Q+ + S K N+ Sbjct: 137 PGALDEKELIEKMNLSAIQDREICCYSISCKEKDNI 172 >5HZH-A nrPDB Length = 332 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 15/135 (11%) Query: 49 SQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQE 107 ++ L V +WDTAG E Y L P+ Y +I F + + ASFE + KW E Sbjct: 193 AKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPE 252 Query: 108 LQAQGNPNMVMALAGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFMETSA 154 ++ PN + L G K DL D + +T A+E G + ++E SA Sbjct: 253 VRHHC-PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 311 Query: 155 KTATNVKEIFYEIAR 169 T +K +F E R Sbjct: 312 LTQRGLKTVFDEAIR 326 >2AL7-A nrPDB Length = 186 Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 14/156 (8%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +L L+G +GK++ V QF E T+G F + + + T+K IWD GQ R Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGNVTIK--IWDIGGQPR 79 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVMALAGNKSDL 127 + S+ Y RG A + + D ++ E ++ + L Q QG P +V+ GNK DL Sbjct: 80 FRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVL---GNKRDL 136 Query: 128 ---LDARKVTAEDAQTYAQENGLFFMETSAKTATNV 160 LD +++ + + Q+ + S K N+ Sbjct: 137 PNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNI 172 >3D6T-B nrPDB Length = 171 Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 70/130 (53%), Gaps = 7/130 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEF--QESTIGAAFFSQTLAVNDATVK---FEIWDT 66 KL+++G+ G+GK++L+ + +K + + Q +T+G + + D + +WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTN-QASFERAKKWVQELQAQGNPNMVMALAGNKS 125 AG+E ++S P + A + V+D++ QA + K W+ ++A+ + + V+ L G Sbjct: 62 AGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVI-LVGTHL 120 Query: 126 DLLDARKVTA 135 D+ D ++ A Sbjct: 121 DVSDEKQRKA 130 >2A5F-A nrPDB Length = 175 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 14/132 (10%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + ++++LG AGK++++ + Q V +TI F+ V VKF +W Sbjct: 10 GNKEM--RILMLGLDAAGKTTILYKLKLGQSV----TTIPTVGFN-VETVTYKNVKFNVW 62 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMVMAL 120 D GQ++ L YY G I V D ++ + A+ QEL N + ++ + Sbjct: 63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEAR---QELHRIINDREMRDAIILI 119 Query: 121 AGNKSDLLDARK 132 NK DL DA K Sbjct: 120 FANKQDLPDAMK 131 >3LVQ-E nrPDB Length = 497 Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 12/125 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 ++++LG AGK++++ + Q V +TI F+ V VKF +WD GQ++ Sbjct: 324 RILMLGLDAAGKTTILYKLKLGQSV----TTIPTVGFN-VETVTYKNVKFNVWDVGGQDK 378 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMVMALAGNKSDL 127 L YY G I V D ++ + A+ QEL N + ++ + NK DL Sbjct: 379 IRPLWRHYYTGTQGLIFVVDCADRDRIDEAR---QELHRIINDREMRDAIILIFANKQDL 435 Query: 128 LDARK 132 DA K Sbjct: 436 PDAMK 440 >3C5C-A nrPDB Length = 187 Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 6/169 (3%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 + L +LG GAGKS+L ++F+ +F+ + + + S+ V+ V + DTA Sbjct: 20 LEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEE-TVDHQPVHLRVMDTAD 78 Query: 69 QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQ--ELQAQGNPNMVMA-LAGNKS 125 + + Y A A ++V+ V ++ SF+ + +++ L A+ + A L GNK Sbjct: 79 LDTPRN-CERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKL 137 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTA-TNVKEIFYEIARRLPR 173 D+ R+VT + A G F E SA +V+ +F+E R R Sbjct: 138 DMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARR 186 >4WNR-A nrPDB Length = 349 Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 4/116 (3%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K++L+GD AGK+SL+ R + + F + T G D +K WD GQE Sbjct: 42 VKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQE 101 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 H+ + + I+V D E+A+ W++ +++ G + V+ +A NK D Sbjct: 102 IMHATHQFFLSKRSLYILVLDSRRD---EKAEYWLKHIRSFGGDSPVL-VALNKID 153 >6BBQ-A nrPDB Length = 520 Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 14/132 (10%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + ++++LG AGK++++ + Q V +TI F+ V VKF +W Sbjct: 356 GNKEM--RILMLGLDAAGKTTILYKLKLGQSV----TTIPTVGFN-VETVTYKNVKFNVW 408 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMVMAL 120 D G ++ L YY G I V D ++ + A+ QEL N + ++ + Sbjct: 409 DVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEAR---QELHRIINDREMRDAIILI 465 Query: 121 AGNKSDLLDARK 132 NK DL DA K Sbjct: 466 FANKQDLPDAMK 477 >5NZV-F nrPDB Length = 181 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 12/157 (7%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + +++++G GAGK++++ + + + +TI F+ V + F +W Sbjct: 14 GNKEM--RILMVGLDGAGKTTVLYKLKLGEVI----TTIPTIGFNVE-TVQYKNISFTVW 66 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D GQ+R SL YYR I V D +++ A++ +Q + + N + N Sbjct: 67 DVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFAN 126 Query: 124 KSDL---LDARKVTAEDAQTYAQENGLFFMETSAKTA 157 K DL + A ++T E ++ N +F++ + T+ Sbjct: 127 KQDLPEAMSAAEIT-EKLGLHSIRNRPWFIQATCATS 162 >2IWR-A nrPDB Length = 178 Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 17/168 (10%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +L +LGD +GKSSL+ RF+ + +++ + + + + V+ T I + AG Sbjct: 9 RLGVLGDARSGKSSLIHRFLTGSYQVLEKTE--SEQYKKEMLVDGQTHLVLIREEAG--- 63 Query: 72 YHSLAP-MYYRGAAAAII-VFDVTNQASFE---RAKKWVQELQAQGNPNMVMALAGNKSD 126 AP + G A A+I VF + ++ SF+ R + L+ +G + +AL G + Sbjct: 64 ----APDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDR 119 Query: 127 LLDARKVTAEDAQTY---AQENGLFFMETSAKTATNVKEIFYEIARRL 171 + + DA+ A + ET A NV +F E+A+++ Sbjct: 120 ISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKV 167 >1MOZ-A nrPDB Length = 183 Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 9/129 (6%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 ++++LG GAGK++++ R + V + TIG F +TL+ + +K +WD GQ Sbjct: 20 RILILGLDGAGKTTILYRLQIGEVVT-TKPTIG--FNVETLSYKN--LKLNVWDLGGQTS 74 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKK----WVQELQAQGNPNMVMALAGNKSDL 127 YY AA I V D T++ A K +QE + Q +V A ++ Sbjct: 75 IRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGA 134 Query: 128 LDARKVTAE 136 L A +V+ E Sbjct: 135 LSASEVSKE 143 >4YLG-A nrPDB Length = 173 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 14/151 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK+S++ + + V +TI F+ V + F +WD GQ++ Sbjct: 15 RILMVGLDAAGKTSILYKLKLGEIV----TTIPTIGFNVE-TVEYKNISFTVWDVGGQDK 69 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMVMALAGNKSDL 127 L YY+ A I V D ++ A+ +EL N N ++ + NK DL Sbjct: 70 IRPLWRHYYQNTQAIIFVVDSNDRDRIGEAR---EELMKMLNEDEMRNAILLVFANKHDL 126 Query: 128 LDARKVT--AEDAQTYAQENGLFFMETSAKT 156 A ++ E +N ++ +TS T Sbjct: 127 PQAMSISEVTEKLGLQTIKNRKWYCQTSCAT 157 >2H16-A nrPDB Length = 183 Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G AGK++++ +F ++ V TIG+ + + +N+ +F +WD GQE Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVH-TSPTIGSNV--EEIVINNT--RFLMWDIGGQES 78 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQ 95 S YY I+V D T++ Sbjct: 79 LRSSWNTYYTNTEFVIVVVDSTDR 102 >3LRP-A nrPDB Length = 181 Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 15/162 (9%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + +++++G AGK++++ + VK V TIG F +T+ + + F +WD GQ Sbjct: 17 DVRILMVGLDAAGKTTILYK-VKLGEVVTTIPTIG--FNVETVEFRN--ISFTVWDVGGQ 71 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN----PNMVMALAGNKS 125 ++ L YY I V D ++ + A+ +EL N + ++ + NK Sbjct: 72 DKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAR---EELHRMINEEELKDAIILVFANKQ 128 Query: 126 DL---LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164 DL + A +VT + +E F T A + E F Sbjct: 129 DLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGF 170 >5UF8-A nrPDB Length = 181 Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 11/162 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + +++++G AGK++++ + + V +TI F+ V + F +W Sbjct: 14 GNKEM--RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFNVE-TVEYKNISFTVW 66 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D GQ++ L Y++ I V D ++ A++ +Q++ + + ++ + N Sbjct: 67 DVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFAN 126 Query: 124 KSDL---LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 162 K DL ++A ++T + ++ + T A T + E Sbjct: 127 KQDLPNAMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYE 168 >3O47-A nrPDB Length = 329 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 6/120 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK++++ + + V +TI F+ V + F +WD GQ++ Sbjct: 167 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFN-VETVEYKNISFTVWDVGGQDK 221 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDA 130 L Y++ I V D ++ A++ + + A+ + V+ + NK DL +A Sbjct: 222 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 281 >1Z6X-A nrPDB Length = 180 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK++++ + + V +TI F+ V + F +WD GQ+R Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFNVE-TVEYKNICFTVWDVGGQDR 73 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQ----AQGNPNMVMALAGNKSDL 127 L Y++ I V D ++ ER ++ ELQ + V+ L NK DL Sbjct: 74 IRPLWKHYFQNTQGLIFVVDSNDR---ERIQEVADELQKMLLVDELRDAVLLLFANKQDL 130 Query: 128 LDARKVT 134 +A ++ Sbjct: 131 PNAMAIS 137 >6FAE-B nrPDB Length = 213 Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/120 (22%), Positives = 57/120 (47%), Gaps = 6/120 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK++++ + + V +TI F+ V + F +WD GQ++ Sbjct: 51 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFN-VETVEYKNISFTVWDVGGQDK 105 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDA 130 L Y++ I V D ++ A++ + + A+ + V+ + NK DL +A Sbjct: 106 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 165 >3DPU-A nrPDB Length = 535 Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLA-----VNDATVK---FEI 63 K+ L+GD AGK+SL+ + + + F + T G ++ ND +K F Sbjct: 43 KVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHF 102 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGN 123 WD GQE H+ + ++ +++ D ++ W++ ++ G + V+ + N Sbjct: 103 WDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN---KHYWLRHIEKYGGKSPVIVVM-N 158 Query: 124 KSD 126 K D Sbjct: 159 KID 161 >2B6H-A nrPDB Length = 192 Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 6/124 (4%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK++++ + + V +TI F+ V + F +WD GQ++ Sbjct: 31 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFN-VETVEYKNICFTVWDVGGQDK 85 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDA 130 L Y++ I V D ++ + + +Q+ LQ + V+ + NK D+ +A Sbjct: 86 IRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNA 145 Query: 131 RKVT 134 V+ Sbjct: 146 MPVS 149 >1YZG-A nrPDB Length = 179 Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 11/83 (13%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK---FEIWDTAG 68 K++++G AGK++++ +F+ ++ V TIG+ V + VK F +WD G Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVH-TSPTIGSN-------VEEIVVKNTHFLMWDIGG 69 Query: 69 QERYHSLAPMYYRGAAAAIIVFD 91 QE S YY I+V D Sbjct: 70 QESLRSSWNTYYSNTEFIILVVD 92 >4V0N-A nrPDB Length = 169 Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 6/126 (4%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 A +K +N +V L + +GK++++ R + Q + + V + F Sbjct: 1 GAASKKVNVLVVGLDN--SGKTTIIERL---KPRPRQAAEVAPTVGFTVDEVEKGPLTFT 55 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA- 121 ++D +G RY +L YYR A A + V D ++ A+ ++ + N V L Sbjct: 56 VFDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYF 115 Query: 122 GNKSDL 127 NK DL Sbjct: 116 ANKKDL 121 >5EE5-B nrPDB Length = 171 Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 ++++LG GAGK++++ R Q E + F +T+ + +KF++WD G Sbjct: 9 RILILGLDGAGKTTILYRL---QVGEVVTTIPTIGFNVETVTYKN--LKFQVWDLGGLTS 63 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDL 127 YY A I V D ++ +K + V L+ + ++ + NK D+ Sbjct: 64 IRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDM 120 >2H57-A nrPDB Length = 190 Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%) Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ---GN 113 +++ F ++D +GQ RY +L YY+ A I V D +++ AK+ + L + Sbjct: 65 SSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKH 124 Query: 114 PNMVMALAGNKSDLLDA 130 + + NK DL DA Sbjct: 125 RRIPILFFANKMDLRDA 141 >6DFF-C nrPDB Length = 193 Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 6/120 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK++++ + + V +TI F+ V + F +WD G ++ Sbjct: 31 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFNVE-TVEYKNISFTVWDVGGLDK 85 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDA 130 L Y++ I V D ++ A++ + + A+ + V+ + NK DL +A Sbjct: 86 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 145 >1J2J-A nrPDB Length = 166 Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust. Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 6/120 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK++++ + + V +TI F+ V + F +WD G ++ Sbjct: 4 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFNVE-TVEYKNISFTVWDVGGLDK 58 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDA 130 L Y++ I V D ++ A++ + + A+ + V+ + NK DL +A Sbjct: 59 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 118 >6HLU-A nrPDB Length = 974 Score = 34.7 bits (78), Expect = 0.026, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLA-----VNDATVK---FEI 63 K+ L+GD AGK+SL+ + + + F + T G ++ ND +K F Sbjct: 482 KVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHF 541 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGN 123 WD GQE H+ + ++ +++ D ++ W++ ++ G + V+ + N Sbjct: 542 WDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN---KHYWLRHIEKYGGKSPVIVVM-N 597 Query: 124 KSD 126 K D Sbjct: 598 KID 600 >1KSG-A nrPDB Length = 186 Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +L++LG AGK++++ +F + V+ T+G F +TL K IWD GQ+ Sbjct: 20 RLLMLGLDNAGKTTILKKF-NGEDVDTISPTLG--FNIKTL--EHRGFKLNIWDVGGQKS 74 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDL 127 S Y+ I V D ++ + ++ +Q L + + + NK DL Sbjct: 75 LRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDL 131 >3AQ4-A nrPDB Length = 184 Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust. Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 15/158 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +++++G AGK++++ + + V +TI F+ V + F +WD GQ++ Sbjct: 22 RILMVGLDAAGKTTILYKLKLGEIV----TTIPTIGFNVE-TVEYKNISFTVWDVGGQDK 76 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMVMALAGNKSDL 127 L Y++ I V D ++ A+ EL N + V+ + NK DL Sbjct: 77 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEAR---DELHRMLNEDELRDAVLLVFANKQDL 133 Query: 128 ---LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 162 ++A ++T + ++ + T A + + E Sbjct: 134 PNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 171 >6CES-A nrPDB Length = 313 Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 21/137 (15%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF---- 61 N ++ K++L+G G+GK+S+ + ++ +GA T+ V + V+F Sbjct: 3 NTAMKKKVLLMGKSGSGKTSM-RSIIFANYIARDTRRLGA-----TIDVEHSHVRFLGNL 56 Query: 62 --EIWDTAGQERYH-----SLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQ---ELQAQ 111 +WD GQ+ + S +R I VFDV ++ E+ + Q E Q Sbjct: 57 VLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESR-ELEKDMHYYQSCLEAILQ 115 Query: 112 GNPNMVMALAGNKSDLL 128 +P+ + +K DL+ Sbjct: 116 NSPDAKIFCLVHKMDLV 132 >6CES-C nrPDB Length = 399 Score = 33.5 bits (75), Expect = 0.061, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 31/205 (15%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTL-------AVNDATVKFEIW 64 +++L+G +GK+S+ Q V F + + F ++ N + V F+IW Sbjct: 63 RILLMGLRRSGKNSI-------QKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIW 115 Query: 65 DTAGQERYHSLA---PMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA-QGNPNMVMAL 120 D GQ + M +RG A I V D + + + +A + NP+M + Sbjct: 116 DFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEV 175 Query: 121 AGNKSD-LLDARKV-TAEDAQTYAQEN---------GLFFMETSAKTATNVKEIFYEIAR 169 +K D L D K+ T D A ++ L F TS + + E F ++ + Sbjct: 176 FIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHS-IFEAFSKVVQ 234 Query: 170 RL-PRVQPTENPTGMVLPDRAMDRA 193 +L P++ EN + + + +++A Sbjct: 235 KLIPQLPTLENLLNIFISNSGIEKA 259 >5DE3-A nrPDB Length = 169 Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 17/160 (10%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 A++++LG AGK++ +L+ + ++ + T G F ++L+ + +K IWD GQ+ Sbjct: 1 ARILVLGLDNAGKTT-ILKALSEEDITTITPTQG--FNIKSLSRDGFNLK--IWDIGGQK 55 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTN-----QASFERAKKWVQELQAQGNPNMVMALAGNKS 125 Y+ A I V D + ++ FE + +QE + G P +V A NK Sbjct: 56 SIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTEL-LQEEKMTGVPLLVFA---NKQ 111 Query: 126 DL---LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 162 DL L A ++ + T ++ SAK T +KE Sbjct: 112 DLVGALAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKE 151 >4ZI3-A nrPDB Length = 190 Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 6/121 (4%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 +++LLG AGK++L+ + + S I +V K +WD GQ Sbjct: 18 VRILLLGLDNAGKTTLLKQLASEDI-----SHITPTQGFNIKSVQSQGFKLNVWDIGGQR 72 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA-GNKSDLLD 129 + Y+ I V D ++ FE + + EL + + V L NK DLL Sbjct: 73 KIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT 132 Query: 130 A 130 A Sbjct: 133 A 133 >2X77-A nrPDB Length = 189 Score = 32.7 bits (73), Expect = 0.100, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 12/123 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 ++++LG AGK+S++ R + + +TL + + FE+WD GQ Sbjct: 24 RVLMLGLDNAGKTSILYRL---HLGDVVTTVPTVGVNLETLQYKN--ISFEVWDLGGQTG 78 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN----MVMALAGNKSDL 127 Y+ A I V D T++ AK EL A + + ++ + NK DL Sbjct: 79 VRPYWRCYFSDTDAVIYVVDSTDRDRMGVAK---HELYALLDEDELRKSLLLIFANKQDL 135 Query: 128 LDA 130 DA Sbjct: 136 PDA 138 >2Q3F-A nrPDB Length = 181 Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust. Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 17/93 (18%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTL-------AVNDATVKF 61 + +++L+G +GKSS+ Q V F + + F ++ N + V F Sbjct: 3 VKPRILLMGLRRSGKSSI-------QKVVFHKMSPNETLFLESTNKICREDVSNSSFVNF 55 Query: 62 EIWDTAGQERYHSLA---PMYYRGAAAAIIVFD 91 +IWD GQ + M +RG A I V D Sbjct: 56 QIWDFPGQIDFFDPTFDYEMIFRGTGALIFVID 88 >3LLU-A nrPDB Length = 196 Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 20/147 (13%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTL-------AVNDATVKFEIW 64 +++L+G +GKSS+ Q V F + + F ++ N + V F+IW Sbjct: 22 RILLMGLRRSGKSSI-------QKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIW 74 Query: 65 DTAGQERYHSLA---PMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA-QGNPNMVMAL 120 D GQ + M +RG A I V D + + + +A + NP+M + Sbjct: 75 DFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEV 134 Query: 121 AGNKSD-LLDARKV-TAEDAQTYAQEN 145 +K D L D K+ T D A ++ Sbjct: 135 FIHKVDGLSDDHKIETQRDIHQRANDD 161 >4ARZ-A nrPDB Length = 310 Score = 30.0 bits (66), Expect = 0.66, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 17/92 (18%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF------EIWD 65 KL+L+G G+GKSS+ + + F +GA T+ V + ++F +WD Sbjct: 8 KLLLMGRSGSGKSSMR-SIIFSNYSAFDTRRLGA-----TIDVEHSHLRFLGNMTLNLWD 61 Query: 66 TAGQ----ERYHSLAPMY-YRGAAAAIIVFDV 92 GQ E Y + + ++ I VFDV Sbjct: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDV 93 >3BH6-A nrPDB Length = 164 Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 6/121 (4%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 +++LLG AGK++L+ + + S I +V K +WD G Sbjct: 5 VRILLLGLDNAGKTTLLKQLASEDI-----SHITPTQGFNIKSVQSQGFKLNVWDIGGLR 59 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA-GNKSDLLD 129 + Y+ I V D ++ FE + + EL + + V L NK DLL Sbjct: 60 KIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT 119 Query: 130 A 130 A Sbjct: 120 A 120 >4JGT-A nrPDB Length = 299 Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 24 SSLVLRFVKDQFVEFQESTI-GAAFFSQTLAVNDATVKFEIWDT--AGQERYHSLAPMYY 80 S + + +D EF+E I GAAFF ++ + + +D G E + A Sbjct: 45 SWYLPKLGRDARREFEERHIPGAAFFD----IDQCSDRTSPYDHMLPGAEHFAEYAGRLG 100 Query: 81 RGAAAAIIVFDVTNQASFERAKKW 104 GAA ++++D ++Q + + W Sbjct: 101 VGAATHVVIYDASDQGLYSAPRVW 124 >3K2Z-A nrPDB Length = 196 Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust. Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 +KSI K+ L+G++ AG+ + +++D ++E ES + + + L V ++ Sbjct: 67 SKSIRNKIPLIGEIRAGEKREAIEYLED-YIEIPESFLSSGYDHFLLKVKGESM 119 >3OPB-A nrPDB Length = 778 Score = 27.7 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 16/97 (16%) Query: 88 IVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYA---QE 144 I++++T R+K ++ +L QG +++ NK D+ + ++ A T Sbjct: 480 IIYNIT------RSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTRMLIFTN 533 Query: 145 NGLFFMETSAKTATNVKEIFYEIARRLPRVQPT-ENP 180 GL F + S A N +E+ LPR P +NP Sbjct: 534 PGLIFKKYS---ALNAIPFLFEL---LPRSTPVDDNP 564 >5M65-A nrPDB Length = 479 Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 13/71 (18%) Query: 107 ELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFY 165 + G PNM++ G+ + L+ A Y E G F++ K + +EIFY Sbjct: 128 DWHGGGTPNMILDDGGDATMLVHA---------GYRAEQGDTAFLD---KPGSEEEEIFY 175 Query: 166 EIARRLPRVQP 176 + +RL + +P Sbjct: 176 ALVKRLLKEKP 186 >1AVB-A nrPDB Length = 226 Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%) Query: 12 KLVLLGDVG-AGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 L+L GD + + L+L VK +E ++G AF+S + +ND T+ Sbjct: 15 NLILQGDATVSSEGHLLLTNVKGN----EEDSMGRAFYSAPIQINDRTI 59 >3LLM-A nrPDB Length = 235 Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust. Identities = 10/30 (33%), Positives = 20/30 (66%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVE 37 S N+ +++ G G GK++ V +F+ D F++ Sbjct: 74 SQNSVVIIRGATGCGKTTQVPQFILDDFIQ 103 >5VHD-D nrPDB Length = 870 Score = 26.2 bits (56), Expect = 9.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 17/24 (70%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVE 37 V+ G+ G GK++ V +F+ D ++E Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >5EQV-A nrPDB Length = 340 Score = 26.2 bits (56), Expect = 9.7, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 16/93 (17%) Query: 61 FEIWDTAGQER---YHSLAPMYYRGAAAAIIVFD-------VTNQASFERAKKWVQELQA 110 + I DT ++R H+L Y ++++D VT E AKKWV E++ Sbjct: 141 YLIIDTPVKDRDGKSHNLRIGYIGFVPPQVMIWDKANLSGKVTVNDITETAKKWVPEMRE 200 Query: 111 QGNPNMVMAL--AGNKSDLLDARKVTAEDAQTY 141 QG ++V+A+ +G S D K AE++ Y Sbjct: 201 QG-ADLVVAIPHSGLSS---DPYKTMAENSVYY 229 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4G01-B nrPDB 267 3e-72 5SZH-B nrPDB 258 2e-69 2RHD-A nrPDB 248 1e-66 5FBL-B nrPDB 245 8e-66 1TU4-A nrPDB 244 2e-65 3L0I-B nrPDB 243 3e-65 2HEI-A nrPDB 241 2e-64 3CUE-F nrPDB 240 2e-64 2F9L-A nrPDB 240 3e-64 1Z0A-A nrPDB 240 3e-64 4KYI-B nrPDB 240 4e-64 2A5J-A nrPDB 239 6e-64 5SZJ-A nrPDB 237 2e-63 5SZI-A nrPDB 237 2e-63 2WWX-A nrPDB 237 2e-63 4LHX-A nrPDB 237 3e-63 4UJ4-A nrPDB 237 4e-63 1Z0F-A nrPDB 237 4e-63 1YZN-A nrPDB 235 7e-63 4RKE-A nrPDB 235 8e-63 5LPN-A nrPDB 234 2e-62 6O62-A nrPDB 233 3e-62 2FG5-A nrPDB 232 8e-62 5XR6-A nrPDB 229 5e-61 5UB8-A nrPDB 229 8e-61 5LEF-A nrPDB 228 8e-61 2G6B-A nrPDB 228 2e-60 3CPJ-B nrPDB 227 2e-60 3CPH-A nrPDB 227 3e-60 2O52-A nrPDB 227 3e-60 2BMD-A nrPDB 225 1e-59 1ZBD-A nrPDB 224 2e-59 2OCY-C nrPDB 224 2e-59 2GF9-A nrPDB 224 2e-59 4RKF-A nrPDB 223 3e-59 3RAB-A nrPDB 223 4e-59 3DZ8-A nrPDB 223 4e-59 2EW1-A nrPDB 223 4e-59 1Z06-A nrPDB 223 5e-59 1YVD-A nrPDB 221 1e-58 3BFK-A nrPDB 221 1e-58 3RWM-B nrPDB 221 2e-58 1EK0-A nrPDB 220 2e-58 1D5C-A nrPDB 219 6e-58 2G77-B nrPDB 218 1e-57 2F7S-A nrPDB 218 2e-57 5YOZ-A nrPDB 217 2e-57 2FFQ-A nrPDB 217 2e-57 2HUP-A nrPDB 217 2e-57 3TSO-A nrPDB 216 4e-57 1X3S-A nrPDB 216 5e-57 6HUF-A nrPDB 216 7e-57 1YZU-A nrPDB 215 8e-57 6IF2-B nrPDB 215 9e-57 4KLZ-A nrPDB 215 1e-56 2GIL-A nrPDB 214 2e-56 5UWI-A nrPDB 213 3e-56 2N1B-A nrPDB 213 3e-56 5CM8-B nrPDB 212 1e-55 6IYB-A nrPDB 211 2e-55 4QXA-A nrPDB 211 2e-55 1WMS-A nrPDB 210 2e-55 2OCB-A nrPDB 210 3e-55 5CLL-A nrPDB 210 3e-55 2IEY-A nrPDB 210 3e-55 2IEZ-A nrPDB 210 3e-55 3BC1-A nrPDB 210 4e-55 2IL1-A nrPDB 209 5e-55 5LDD-C nrPDB 208 1e-54 4M8N-E nrPDB 208 2e-54 4DXA-A nrPDB 204 3e-53 2KE5-A nrPDB 203 6e-53 5C2K-A nrPDB 202 6e-53 1ZC4-A nrPDB 201 1e-52 3WYF-A nrPDB 197 3e-51 4PHF-A nrPDB 196 3e-51 3TH5-A nrPDB 196 4e-51 2P5S-A nrPDB 196 4e-51 1Z22-A nrPDB 195 1e-50 5ZHX-e nrPDB 194 2e-50 3RYT-C nrPDB 194 2e-50 2J0V-A nrPDB 193 3e-50 2WBL-C nrPDB 193 4e-50 2NTY-C nrPDB 192 7e-50 5XOJ-A nrPDB 192 7e-50 2FN4-A nrPDB 192 7e-50 5WDR-A nrPDB 192 8e-50 2ATV-A nrPDB 192 9e-50 5JCP-B nrPDB 191 2e-49 2W2X-A nrPDB 191 2e-49 2WKQ-A nrPDB 191 2e-49 4WA7-A nrPDB 191 2e-49 2CJW-A nrPDB 190 3e-49 3BWD-D nrPDB 190 3e-49 2ERY-A nrPDB 190 5e-49 4KU4-A nrPDB 189 5e-49 2J1L-A nrPDB 188 1e-48 4CZ2-A nrPDB 188 1e-48 3CBQ-A nrPDB 188 1e-48 2ERX-A nrPDB 188 2e-48 2ATX-A nrPDB 188 2e-48 3CON-A nrPDB 187 2e-48 5WDQ-A nrPDB 187 3e-48 2FV8-A nrPDB 186 4e-48 4U5X-A nrPDB 186 4e-48 1RYH-A nrPDB 186 7e-48 3A58-B nrPDB 185 8e-48 4FMC-F nrPDB 185 9e-48 5UHV-A nrPDB 185 1e-47 2G3Y-A nrPDB 184 2e-47 3PIR-A nrPDB 183 3e-47 3VHL-B nrPDB 181 1e-46 5ZVP-A nrPDB 181 2e-46 3T5G-A nrPDB 179 8e-46 3OES-A nrPDB 179 8e-46 5VCU-A nrPDB 179 8e-46 2Q3H-A nrPDB 179 9e-46 3Q72-A nrPDB 178 2e-45 3Q85-A nrPDB 178 2e-45 3E5H-A nrPDB 176 4e-45 5XC3-A nrPDB 176 6e-45 4DJT-A nrPDB 176 7e-45 3RAP-R nrPDB 175 2e-44 6FF8-A nrPDB 173 4e-44 3CLV-A nrPDB 173 5e-44 4MIT-A nrPDB 171 2e-43 2NZJ-A nrPDB 170 5e-43 1GWN-A nrPDB 164 3e-41 2GF0-A nrPDB 164 3e-41 1M7B-A nrPDB 163 6e-41 3REG-A nrPDB 161 2e-40 3C5C-A nrPDB 146 7e-36 5C1S-A nrPDB 140 4e-34 5HZH-A nrPDB 137 3e-33 2REX-B nrPDB 136 6e-33 3LRP-A nrPDB 134 2e-32 2YC4-C nrPDB 133 4e-32 5UF8-A nrPDB 132 1e-31 3O47-A nrPDB 131 3e-31 2AL7-A nrPDB 129 6e-31 5NZV-F nrPDB 129 9e-31 4YLG-A nrPDB 128 1e-30 4ILE-A nrPDB 128 2e-30 2A5F-A nrPDB 127 4e-30 3LVQ-E nrPDB 125 1e-29 1Z6X-A nrPDB 125 1e-29 6BBQ-A nrPDB 124 2e-29 2IWR-A nrPDB 121 3e-28 4WNR-A nrPDB 118 2e-27 1MOZ-A nrPDB 113 7e-26 3D6T-B nrPDB 110 4e-25 2H16-A nrPDB 108 2e-24 Sequences not found previously or not previously below threshold: 6FAE-B nrPDB 129 6e-31 6DFF-C nrPDB 128 1e-30 1J2J-A nrPDB 127 3e-30 2B6H-A nrPDB 126 9e-30 3AQ4-A nrPDB 124 2e-29 5EE5-B nrPDB 111 2e-25 3IHW-A nrPDB 110 4e-25 1YZG-A nrPDB 108 2e-24 4ZI3-A nrPDB 103 5e-23 1KSG-A nrPDB 100 8e-22 3BH6-A nrPDB 98 2e-21 2X77-A nrPDB 98 2e-21 5DE3-A nrPDB 95 2e-20 6HLU-A nrPDB 94 3e-20 3DPU-A nrPDB 94 3e-20 4V0N-A nrPDB 88 2e-18 2H57-A nrPDB 84 3e-17 5DI3-B nrPDB 76 9e-15 4M9Q-A nrPDB 76 1e-14 1M2O-B nrPDB 76 1e-14 6GNI-B nrPDB 74 5e-14 2GAO-A nrPDB 73 8e-14 4BAS-A nrPDB 72 1e-13 1F6B-A nrPDB 71 4e-13 4C0K-A nrPDB 67 5e-12 6CES-A nrPDB 66 8e-12 6IAE-A nrPDB 64 5e-11 3T1O-A nrPDB 63 8e-11 6GDG-D nrPDB 63 1e-10 5YMX-A nrPDB 62 1e-10 2GJ9-A nrPDB 60 8e-10 6G79-A nrPDB 57 6e-09 2E87-A nrPDB 57 7e-09 5J8B-z nrPDB 56 7e-09 5IMR-C nrPDB 56 7e-09 4ARZ-A nrPDB 56 1e-08 2LKD-A nrPDB 53 8e-08 3CB4-D nrPDB 53 1e-07 3GEH-A nrPDB 53 1e-07 5KUT-A nrPDB 52 1e-07 3K53-A nrPDB 52 2e-07 3LLU-A nrPDB 51 4e-07 2DYK-A nrPDB 51 4e-07 6CES-C nrPDB 50 5e-07 1XZP-A nrPDB 50 6e-07 1MKY-A nrPDB 50 8e-07 6D4G-A nrPDB 49 9e-07 5DN8-A nrPDB 49 9e-07 2Q3F-A nrPDB 49 9e-07 3C5H-A nrPDB 49 1e-06 3GEE-A nrPDB 49 1e-06 6GB2-BC nrPDB 49 1e-06 3J8G-X nrPDB 49 1e-06 5LAD-A nrPDB 48 4e-06 5KU1-A nrPDB 48 4e-06 2CXX-A nrPDB 48 4e-06 5KSO-A nrPDB 47 5e-06 5ZZM-A nrPDB 47 6e-06 2YWH-A nrPDB 46 8e-06 3IZY-P nrPDB 46 1e-05 1WF3-A nrPDB 46 2e-05 4V7F-o nrPDB 45 2e-05 2GTP-A nrPDB 45 2e-05 3IEU-A nrPDB 44 3e-05 3R9W-A nrPDB 44 5e-05 4KJZ-A nrPDB 44 5e-05 4B44-A nrPDB 44 5e-05 4CSU-9 nrPDB 44 6e-05 3V00-C nrPDB 43 7e-05 2QAG-A nrPDB 43 8e-05 3FTQ-A nrPDB 43 8e-05 3J4J-A nrPDB 43 1e-04 5YT0-A nrPDB 42 2e-04 5FG3-A nrPDB 42 2e-04 4TN1-B nrPDB 42 2e-04 3T5D-A nrPDB 41 2e-04 2QTH-A nrPDB 41 2e-04 5M04-A nrPDB 41 3e-04 2QAG-C nrPDB 41 3e-04 2ODE-A nrPDB 41 3e-04 4NCL-A nrPDB 41 4e-04 4N3G-A nrPDB 41 4e-04 4UJC-AB nrPDB 41 5e-04 1UDX-A nrPDB 40 5e-04 3A1W-A nrPDB 40 6e-04 4DCU-A nrPDB 40 8e-04 5X4B-A nrPDB 40 8e-04 5KH0-A nrPDB 40 9e-04 1LNZ-A nrPDB 40 9e-04 3A1U-A nrPDB 39 0.001 3PR1-A nrPDB 39 0.001 1PUJ-A nrPDB 39 0.001 4QJ3-A nrPDB 39 0.001 2BCJ-Q nrPDB 39 0.001 3W5J-A nrPDB 39 0.001 1SHZ-A nrPDB 39 0.002 5VAI-A nrPDB 39 0.002 1ZO1-I nrPDB 39 0.002 4V8Y-CP nrPDB 38 0.002 1G7S-A nrPDB 38 0.002 4NCF-A nrPDB 38 0.003 6OIJ-A nrPDB 38 0.003 3WBI-A nrPDB 38 0.003 4FID-A nrPDB 38 0.003 4V8Z-CV nrPDB 38 0.003 6OIK-A nrPDB 38 0.003 5CYO-A nrPDB 38 0.003 1NI3-A nrPDB 38 0.004 2WJG-A nrPDB 38 0.004 3JCN-b nrPDB 37 0.005 4WQY-BZ nrPDB 37 0.007 6O81-S nrPDB 36 0.008 6FEC-S nrPDB 36 0.008 1ZCB-A nrPDB 36 0.009 2WJI-A nrPDB 36 0.010 5IRR-A nrPDB 36 0.014 6D9H-A nrPDB 36 0.016 3H2Y-A nrPDB 35 0.017 3EC1-A nrPDB 35 0.018 5H7K-A nrPDB 35 0.020 5H7J-A nrPDB 35 0.020 1HEY-A nrPDB 35 0.021 5EE0-A nrPDB 35 0.022 4AC9-A nrPDB 35 0.022 4KV9-A nrPDB 35 0.023 5AR1-A nrPDB 35 0.028 5NON-A nrPDB 34 0.030 2VNE-A nrPDB 34 0.030 1TAG-A nrPDB 34 0.030 4R98-A nrPDB 34 0.032 2XTZ-A nrPDB 34 0.042 1IY1-A nrPDB 34 0.049 2DHR-A nrPDB 34 0.050 4U00-A nrPDB 34 0.050 4Z54-A nrPDB 34 0.051 3LX8-A nrPDB 34 0.051 3JB9-B nrPDB 34 0.055 2YYZ-A nrPDB 34 0.060 4V89-AW nrPDB 33 0.064 1ZCA-A nrPDB 33 0.070 4YMS-J nrPDB 33 0.079 3R7W-B nrPDB 33 0.079 6G12-A nrPDB 33 0.092 1S0U-A nrPDB 33 0.093 4Z8X-A nrPDB 33 0.098 3P27-A nrPDB 33 0.10 3IZQ-1 nrPDB 33 0.11 2OHF-A nrPDB 32 0.16 1YE8-A nrPDB 32 0.17 2IYT-A nrPDB 32 0.17 6HZK-A nrPDB 32 0.21 5LKM-A nrPDB 32 0.22 4TLD-A nrPDB 32 0.23 2R65-A nrPDB 31 0.24 2IW3-A nrPDB 31 0.28 3S1A-A nrPDB 31 0.29 6F1T-i nrPDB 31 0.33 5A9Z-CA nrPDB 31 0.33 3J3U-A nrPDB 31 0.33 2WIC-A nrPDB 31 0.35 5TY0-A nrPDB 31 0.35 6F1Y-j nrPDB 31 0.36 3TR5-A nrPDB 31 0.37 3J81-k nrPDB 31 0.40 2YV5-A nrPDB 31 0.40 1SUL-A nrPDB 31 0.43 4RY2-A nrPDB 31 0.45 5IDV-A nrPDB 31 0.46 3V9H-A nrPDB 31 0.47 5DGX-A nrPDB 31 0.49 5ZLU-EE nrPDB 31 0.49 5C78-A nrPDB 31 0.51 1S4Q-A nrPDB 31 0.51 6CS8-A nrPDB 31 0.53 5OCH-A nrPDB 30 0.55 2IT1-A nrPDB 30 0.57 3PEN-A nrPDB 30 0.59 4MYH-A nrPDB 30 0.66 2QU8-A nrPDB 30 0.71 1JAL-A nrPDB 30 0.72 3PXG-A nrPDB 30 0.74 6EM8-A nrPDB 30 0.74 4N1A-A nrPDB 30 0.74 3PXI-A nrPDB 30 0.76 6H7G-A nrPDB 30 0.78 5GAD-l nrPDB 30 0.80 3V70-A nrPDB 30 0.81 6EMW-E nrPDB 30 0.83 6IC4-I nrPDB 30 0.84 5OWV-A nrPDB 30 0.84 5ANB-A nrPDB 30 0.85 2AXV-A nrPDB 30 0.87 3GD7-A nrPDB 29 0.93 3B5X-A nrPDB 29 0.95 1R6B-X nrPDB 29 0.95 3EC2-A nrPDB 29 0.96 5OFO-C nrPDB 29 1.1 4CIU-A nrPDB 29 1.1 5D4W-A nrPDB 29 1.1 2P5T-B nrPDB 29 1.1 6I3O-A nrPDB 29 1.1 1ZUN-B nrPDB 29 1.2 5MKK-A nrPDB 29 1.2 1YR7-A nrPDB 29 1.2 1QVR-A nrPDB 29 1.2 4HZI-A nrPDB 29 1.2 1JBK-A nrPDB 29 1.2 6HA8-V nrPDB 29 1.2 2RGK-A nrPDB 29 1.2 2OUK-A nrPDB 29 1.2 2ZBL-A nrPDB 29 1.3 5B3F-A nrPDB 29 1.3 4IXM-A nrPDB 29 1.3 1U0L-A nrPDB 29 1.3 2GA8-A nrPDB 29 1.3 5MRE-WW nrPDB 29 1.3 1OFI-A nrPDB 29 1.3 6QUZ-B nrPDB 29 1.3 5VHD-D nrPDB 29 1.4 2MHH-A nrPDB 29 1.4 1WDT-A nrPDB 29 1.4 4YPN-A nrPDB 29 1.5 4YPL-A nrPDB 29 1.5 2I3B-A nrPDB 29 1.5 3LLM-A nrPDB 29 1.5 2GZA-A nrPDB 29 1.5 5NKM-B nrPDB 29 1.5 2QAG-B nrPDB 29 1.5 4MKI-B nrPDB 29 1.5 3FVQ-A nrPDB 29 1.5 6HCM-k1 nrPDB 29 1.6 4O0M-A nrPDB 29 1.6 4F4J-A nrPDB 29 1.6 2PJZ-A nrPDB 29 1.6 1Z6G-A nrPDB 29 1.6 4HSE-A nrPDB 29 1.7 6ED3-A nrPDB 29 1.7 3DEF-A nrPDB 29 1.7 2P65-A nrPDB 29 1.7 6N0I-A nrPDB 29 1.7 3ZJC-A nrPDB 29 1.7 4Q7L-A nrPDB 29 1.8 3VX4-A nrPDB 29 1.8 6C2V-A nrPDB 29 1.8 5IFK-A nrPDB 29 1.8 2NQL-A nrPDB 29 1.8 4MRS-A nrPDB 29 1.8 5JWO-A nrPDB 29 1.9 2CE7-A nrPDB 29 1.9 5TV2-A nrPDB 29 1.9 5JSZ-B nrPDB 29 2.0 6D00-1 nrPDB 29 2.0 4WZ6-A nrPDB 29 2.0 2D62-A nrPDB 28 2.1 5EUF-A nrPDB 28 2.1 6BZR-B nrPDB 28 2.3 5GM6-Y nrPDB 28 2.4 5B57-C nrPDB 28 2.4 4FIN-A nrPDB 28 2.4 2OCP-A nrPDB 28 2.5 5NIK-J nrPDB 28 2.5 5LJA-A nrPDB 28 2.5 3D0O-A nrPDB 28 2.5 6FA9-A nrPDB 28 2.6 3PV0-A nrPDB 28 2.6 3JVU-A nrPDB 28 2.6 4OI0-A nrPDB 28 2.7 1IHU-A nrPDB 28 2.8 4YDS-A nrPDB 28 2.8 5GKO-A nrPDB 28 3.0 2A30-A nrPDB 28 3.0 6G2G-A nrPDB 28 3.1 4XD7-D nrPDB 28 3.1 5D0U-A nrPDB 28 3.1 4A9A-A nrPDB 28 3.2 6BK7-A nrPDB 28 3.3 3VAA-A nrPDB 28 3.4 4XGC-E nrPDB 28 3.5 1LV7-A nrPDB 28 3.5 1E94-E nrPDB 27 3.5 1IM2-A nrPDB 27 3.6 6FT6-s nrPDB 27 3.6 2PCL-A nrPDB 27 3.7 6FKI-F nrPDB 27 3.7 5CDF-E nrPDB 27 3.7 2XND-D nrPDB 27 3.7 2W6I-D nrPDB 27 3.7 2W6D-A nrPDB 27 3.7 4V7D-BZ nrPDB 27 3.9 2NPI-A nrPDB 27 4.0 6QUZ-A nrPDB 27 4.2 5Z1X-A nrPDB 27 4.4 5LL6-h nrPDB 27 4.5 5IK2-D nrPDB 27 4.6 6J9S-A nrPDB 27 4.7 1EZ4-A nrPDB 27 4.9 4ZIR-B nrPDB 27 5.0 4Q7K-A nrPDB 27 5.1 4G1U-C nrPDB 27 5.4 4LN1-A nrPDB 27 5.7 3CNO-A nrPDB 27 5.9 5CA8-A nrPDB 27 6.3 5VH6-A nrPDB 27 6.5 4ZPR-B nrPDB 27 6.5 6O9M-2 nrPDB 27 7.2 5OF4-D nrPDB 27 7.2 2PX0-A nrPDB 27 7.2 1EFM-A nrPDB 27 7.4 6F5D-D nrPDB 26 7.8 1MJ1-A nrPDB 26 8.4 6CY1-A nrPDB 26 9.6 >4G01-B nrPDB Length = 181 Score = 267 bits (682), Expect = 3e-72, Method: Composition-based stats. Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK Sbjct: 3 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 62 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL Sbjct: 63 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 122 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN Sbjct: 123 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 181 >5SZH-B nrPDB Length = 203 Score = 258 bits (659), Expect = 2e-69, Method: Composition-based stats. Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 4/198 (2%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 KL+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+K +IWD Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 65 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQER+ ++ YYRGA I+V+DVT+Q S+ K+W+QE+ + N+ L GNKS Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 125 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVL 185 DL + V A+ +A G+ F+ETSAK ATNV++ F +A + + +G Sbjct: 126 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER 185 Query: 186 PDRAMD----RAVSSSCC 199 P+ +D + CC Sbjct: 186 PNLKIDSTPVKPAGGGCC 203 >2RHD-A nrPDB Length = 175 Score = 248 bits (633), Expect = 1e-66, Method: Composition-based stats. Identities = 72/172 (41%), Positives = 108/172 (62%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 KL+L+GD G GKS L+LRF D + + STIG F +T+++ + TVK Sbjct: 1 GMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 +IWDTAGQER+ ++ YYRGA IIV+DVT++ SF+ K+W+QE+ N+ L Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLV 120 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 GNK DL+ R VT+++ + A +G+ F+ETSAK A NV++ F+ +A + + Sbjct: 121 GNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKK 172 >5FBL-B nrPDB Length = 221 Score = 245 bits (626), Expect = 8e-66, Method: Composition-based stats. Identities = 72/186 (38%), Positives = 117/186 (62%), Gaps = 4/186 (2%) Query: 1 MAAAG----NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVND 56 M + G K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+ Sbjct: 3 MGSMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG 62 Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNM 116 T+K +IWDTAGQERY ++ YYRGA A++V+D+ ++E ++W++EL+ + N+ Sbjct: 63 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 122 Query: 117 VMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 V+ L GNKSDL R V ++A+ +A++NGL F+ETSA +TNV+ F I + R+ Sbjct: 123 VIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVS 182 Query: 177 TENPTG 182 + + Sbjct: 183 QKQMSD 188 >1TU4-A nrPDB Length = 171 Score = 244 bits (624), Expect = 2e-65, Method: Composition-based stats. Identities = 115/170 (67%), Positives = 139/170 (81%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 GNK KLVLLG+ GKSSLVLRFVK QF EFQESTIGAAF +QT+ ++D TVKFEI Sbjct: 1 MGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 60 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGN 123 WDTAGQERYHSLAPMYYRGA AAI+V+D+TN+ SF RAK WV+ELQ Q +PN+V+AL+GN Sbjct: 61 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGN 120 Query: 124 KSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 K+DL + R V ++AQ+YA +N L FMETSAKT+ NV EIF IA++LP+ Sbjct: 121 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 170 >3L0I-B nrPDB Length = 199 Score = 243 bits (622), Expect = 3e-65, Method: Composition-based stats. Identities = 73/174 (41%), Positives = 106/174 (60%), Gaps = 1/174 (0%) Query: 1 MAAAG-NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 M++ KL+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+ Sbjct: 23 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 82 Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMA 119 K +IWDTAGQER+ ++ YYRGA I+V+DVT+Q SF K+W+QE+ + N+ Sbjct: 83 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL 142 Query: 120 LAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 L GNK DL + V A+ +A G+ F+ETSAK ATNV++ F +A + + Sbjct: 143 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKK 196 >2HEI-A nrPDB Length = 179 Score = 241 bits (616), Expect = 2e-64, Method: Composition-based stats. Identities = 112/175 (64%), Positives = 140/175 (80%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 + +K KLVLLG+ GKSSLVLRFVK QF E+QESTIGAAF +Q++ ++D TVKFE Sbjct: 1 GSASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFE 60 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 IWDTAGQERYHSLAPMYYRGA AAI+V+D+TNQ +F RAK WV+ELQ Q +P++V+ALAG Sbjct: 61 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAG 120 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 NK+DL + R V E+AQ YA +N L FMETSAKTA NV ++F IA++LP+ +P Sbjct: 121 NKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 175 >3CUE-F nrPDB Length = 206 Score = 240 bits (614), Expect = 2e-64, Method: Composition-based stats. Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 9/204 (4%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 KL+L+G+ G GKS L+LRF D + STIG F +T+ ++ TVK +IW Sbjct: 3 SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIW 62 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DTAGQER+ ++ YYRG+ IIV+DVT+Q SF K W+QE+ ++ L GNK Sbjct: 63 DTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNK 122 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN----- 179 DL D R V + A+ +A N + F+ETSA +TNV++ F +AR++ +N Sbjct: 123 CDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETT 182 Query: 180 ----PTGMVLPDRAMDRAVSSSCC 199 G V CC Sbjct: 183 QKKEDKGNVNLKGQSLTNTGGGCC 206 >2F9L-A nrPDB Length = 199 Score = 240 bits (614), Expect = 3e-64, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 113/183 (61%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+ T+K +IWD Sbjct: 1 MYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQERY + YYRGA A++V+D+ ++E ++W++EL+ + N+V+ L GNKS Sbjct: 61 TAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKS 120 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVL 185 DL R V ++A+ +A++N L F+ETSA +TNV+E F I + R+ + Sbjct: 121 DLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAA 180 Query: 186 PDR 188 D Sbjct: 181 HDE 183 >1Z0A-A nrPDB Length = 174 Score = 240 bits (613), Expect = 3e-64, Method: Composition-based stats. Identities = 69/170 (40%), Positives = 107/170 (62%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 + K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IW Sbjct: 5 SAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 64 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DTAGQE + S+ YYRGAA A++V+D+T + +F W+++ + N NMV+ L GNK Sbjct: 65 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 124 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 SDL R+V E+ + +A+E+GL FMETSAKTA+NV+E F A+ + Sbjct: 125 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >4KYI-B nrPDB Length = 170 Score = 240 bits (612), Expect = 4e-64, Method: Composition-based stats. Identities = 113/170 (66%), Positives = 134/170 (78%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 A G+K KLVLLG+ GKSSLVLRFVK QF E+QESTIGAAF +QT+ ++D TVKF Sbjct: 1 GAMGSKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 EIWDTAG ERYHSLAPMYYRGA AAI+V+D+TN +F RAK WV+ELQ Q +PN+V+ALA Sbjct: 61 EIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALA 120 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 GNK+DL R V ++AQ YA +N L FMETSAKTA NV EIF IA++L Sbjct: 121 GNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 170 >2A5J-A nrPDB Length = 191 Score = 239 bits (611), Expect = 6e-64, Method: Composition-based stats. Identities = 70/169 (41%), Positives = 106/169 (62%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 S K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWD Sbjct: 17 RGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 76 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQE + S+ YYRGAA A++V+D+T + +F W+++ + + NMV+ L GNKS Sbjct: 77 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 136 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 DL R V E+ + +A+E+GL FMETSAKTA NV+E F A+ + R Sbjct: 137 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 185 >5SZJ-A nrPDB Length = 202 Score = 237 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 67/174 (38%), Positives = 101/174 (58%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 + KL+L+GD G GK+ ++ RF D F STIG F +T+ + +K +IWDT Sbjct: 8 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 67 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 AGQER+H++ YYRGA ++V+D+TN SFE KW++ + N ++ L GNK D Sbjct: 68 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 127 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 + D R V + A+E+G+ F ETSAK N+++ F +A + R P + P Sbjct: 128 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 181 >5SZI-A nrPDB Length = 209 Score = 237 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 63/189 (33%), Positives = 105/189 (55%), Gaps = 3/189 (1%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 KL+L+GD G GK+ ++ RF +D F STIG F +T+ ++ +K +IWDT Sbjct: 7 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 66 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 AGQER+ ++ YYRGA ++V+D+TN+ SF+ + W++ ++ + ++ + GNK D Sbjct: 67 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 126 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP---RVQPTENPTGM 183 + D R+V+ E + A + G+ FMETSAK NV+ F+ +AR + + N Sbjct: 127 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQG 186 Query: 184 VLPDRAMDR 192 + Sbjct: 187 SNQGVKITP 195 >2WWX-A nrPDB Length = 175 Score = 237 bits (605), Expect = 2e-63, Method: Composition-based stats. Identities = 71/168 (42%), Positives = 102/168 (60%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 KL+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+K +IWD Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQER+ ++ YYRGA I+V+DVT+Q SF K+W+QE+ + N+ L G K Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGIKC 123 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 DL + V A+ +A G+ F+ETSAK ATNV++ F +A + + Sbjct: 124 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKK 171 >4LHX-A nrPDB Length = 186 Score = 237 bits (605), Expect = 3e-63, Method: Composition-based stats. Identities = 62/172 (36%), Positives = 103/172 (59%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 KL+L+GD G GK+ ++ RF +D F STIG F +T+ ++ +K +IWDT Sbjct: 7 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 66 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 AGQER+ ++ YYRGA ++V+D+TN+ SF+ + W++ ++ + ++ + GNK D Sbjct: 67 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 126 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTE 178 + D R+V+ E + A + G+ FMETSAK NV+ F+ +AR + + Sbjct: 127 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKK 178 >4UJ4-A nrPDB Length = 185 Score = 237 bits (604), Expect = 4e-63, Method: Composition-based stats. Identities = 69/177 (38%), Positives = 113/177 (63%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+ T+K +IWD Sbjct: 6 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 65 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAG ERY ++ YYRGA A++V+D+ ++E ++W++EL+ + N+V+ L GNKS Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKS 125 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTG 182 DL R V ++A+ +A++NGL F+ETSA +TNV+ F I + R+ + + Sbjct: 126 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSD 182 >1Z0F-A nrPDB Length = 179 Score = 237 bits (604), Expect = 4e-63, Method: Composition-based stats. Identities = 70/171 (40%), Positives = 112/171 (65%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 A N S K +++GD+G GKS L+ +F + +F+ TIG F ++ + V+ +K + Sbjct: 8 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 67 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 IWDTAGQER+ ++ YYRGAA A++V+D+T ++++ W+ + + NPN V+ L G Sbjct: 68 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIG 127 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 NK+DL R VT E+A+ +A+ENGL F+E SAKT NV++ F E A+++ + Sbjct: 128 NKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 178 >1YZN-A nrPDB Length = 185 Score = 235 bits (601), Expect = 7e-63, Method: Composition-based stats. Identities = 71/169 (42%), Positives = 102/169 (60%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 KL+L+G+ G GKS L+LRF D + STIG F +T+ ++ TVK +IW Sbjct: 16 SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIW 75 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DTAGQER+ ++ YYRG+ IIV+DVT+Q SF K W+QE+ ++ L GNK Sbjct: 76 DTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNK 135 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 DL D R V + A+ +A N + F+ETSA +TNV++ F +AR++ Sbjct: 136 CDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 184 >4RKE-A nrPDB Length = 176 Score = 235 bits (601), Expect = 8e-63, Method: Composition-based stats. Identities = 69/174 (39%), Positives = 108/174 (62%), Gaps = 1/174 (0%) Query: 2 AAAG-NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 A G + + K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K Sbjct: 1 GAMGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIK 60 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 +IWDTAG E + S+ YYRGAA A++V+D+T + +F W+++ + N NMV+ L Sbjct: 61 LQIWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIML 120 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 GNKSDL R+V E+ + +A+E+GL FMETSA+TA NV+E F A+ + Sbjct: 121 IGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK 174 >5LPN-A nrPDB Length = 177 Score = 234 bits (597), Expect = 2e-62, Method: Composition-based stats. Identities = 66/170 (38%), Positives = 99/170 (58%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 + KL+L+GD G GK+ ++ RF D F STIG F +T+ + +K +IWDT Sbjct: 8 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 67 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 AGQER+H++ YYRGA ++V+D+TN SFE KW++ + N ++ L GNK D Sbjct: 68 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 127 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 + D R V + A+E+G+ F ETSAK N+++ F +A + R P Sbjct: 128 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 177 >6O62-A nrPDB Length = 184 Score = 233 bits (596), Expect = 3e-62, Method: Composition-based stats. Identities = 68/177 (38%), Positives = 102/177 (57%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 ++ + KL+L+GD G GKS L+LRFV+D+F +TIG F +T+ +K + Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 +WDTAGQER+ ++ YYRGA ++++DVT+ SFE + W Q + N + + L G Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 NK D R+V+ E Q A + + F+E SAK+ NV IFYE+A + EN Sbjct: 127 NKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHVEEN 183 >2FG5-A nrPDB Length = 192 Score = 232 bits (592), Expect = 8e-62, Method: Composition-based stats. Identities = 94/179 (52%), Positives = 125/179 (69%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + G+ K+ LLGD G GKSS+V RFV+D F TIGA+F ++T+ + K Sbjct: 14 LVPRGSAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHK 73 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F IWDTAGQER+HSLAPMYYRG+AAA+IV+D+T Q SF KKWV+EL+ G N+VMA+ Sbjct: 74 FLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAI 133 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 AGNK DL D R+V +DA+ YA+ G +ETSAK A N++E+F I+R++P + P EN Sbjct: 134 AGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHEN 192 >5XR6-A nrPDB Length = 194 Score = 229 bits (585), Expect = 5e-61, Method: Composition-based stats. Identities = 76/169 (44%), Positives = 110/169 (65%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 KLVL+GD G GKS+L+ RF K++F +STIG F ++T V VK +IWD Sbjct: 21 MYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWD 80 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQERY ++ YYRGA A++++DVT A+FE A +W++EL+ +PN+V+ L GNK Sbjct: 81 TAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKC 140 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 DL V E+A+ +A+ L+FMETSA ATNV+ F E+ ++ ++ Sbjct: 141 DLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKI 189 >5UB8-A nrPDB Length = 222 Score = 229 bits (584), Expect = 8e-61, Method: Composition-based stats. Identities = 70/169 (41%), Positives = 107/169 (63%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 + K+VL+GD G GKS+L+ RF +D+F STIG F ++TL ++ VK +IWD Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQERY ++ YYRGA A+IV+D+ S+E +W++EL+ + N+++ L GNKS Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 DL R V E+A+ +A EN L F E SA ++ NV F+++ + + + Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEM 179 >5LEF-A nrPDB Length = 191 Score = 228 bits (583), Expect = 8e-61, Method: Composition-based stats. Identities = 73/191 (38%), Positives = 122/191 (63%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 A GN KLV LG+ GK+SL+ RF+ D F ++TIG F S+T+ + D TV+ Sbjct: 1 GAMGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 ++WDTAG ER+ SL P Y R + A++V+D+TN SF++ KW+ +++ + ++++ L Sbjct: 61 QLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLV 120 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPT 181 GNK+DL D R+V+ E+ + A+E + F+ETSAK NVK++F +A LP ++ T++ + Sbjct: 121 GNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRS 180 Query: 182 GMVLPDRAMDR 192 + D +++ Sbjct: 181 REDMIDIKLEK 191 >2G6B-A nrPDB Length = 180 Score = 228 bits (581), Expect = 2e-60, Method: Composition-based stats. Identities = 70/173 (40%), Positives = 101/173 (58%), Gaps = 1/173 (0%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVE-FQESTIGAAFFSQTLAVNDATVKFEIWD 65 + K++L+GD G GK+ L++RF F+ ST+G F ++ L V+ VK ++WD Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 66 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQER+ S+ YYR A A ++++DVTN+ASF+ + W+ E+ ++ + L GNK Sbjct: 67 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 126 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTE 178 D R V ED + A+E GL FMETSAKT NV F IA+ L R Sbjct: 127 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRRSMKA 179 >3CPJ-B nrPDB Length = 223 Score = 227 bits (580), Expect = 2e-60, Method: Composition-based stats. Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 1/178 (0%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 + + K+VL+GD G GKS+L+ RF K++F +STIG F ++TL + +K +IWD Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWD 68 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQERY ++ YYRGA A+IV+D++ +S+E W+ EL+ + N+ + L GNKS Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP-RVQPTENPTG 182 DL R V E+++T+AQEN L F ETSA + NV + F E+ + +V + G Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLG 186 >3CPH-A nrPDB Length = 213 Score = 227 bits (579), Expect = 3e-60, Method: Composition-based stats. Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 4/176 (2%) Query: 2 AAAGN---KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 58 A++GN K++L+GD G GKS L++RFV+D+F +TIG F +T+ +N Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK 68 Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVM 118 VK ++WDTAGQER+ ++ YYRGA I+V+DVT++ +F K+W + + N + Sbjct: 69 VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQL 128 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 L GNKSD+ R VTA+ + A+E G+ F+E+SAK NV EIF+ +A+ + Sbjct: 129 LLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 >2O52-A nrPDB Length = 200 Score = 227 bits (578), Expect = 3e-60, Method: Composition-based stats. Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 2/178 (1%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 K +++G G GKS L+ +F++++F + TIG F S+ + V TVK +IWDTA Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL 127 GQER+ S+ YYRGAA A++V+D+T++ ++ W+ + + +PN+V+ L GNK DL Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 142 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL-PRVQPTE-NPTGM 183 R+VT +A +AQEN L F+ETSA T NV+E F + AR + ++ E +P M Sbjct: 143 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 200 >2BMD-A nrPDB Length = 186 Score = 225 bits (573), Expect = 1e-59, Method: Composition-based stats. Identities = 70/179 (39%), Positives = 111/179 (62%), Gaps = 2/179 (1%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 K +++G+ G GKS L+ +F++ +F + TIG F S+ + V VK +IWDT Sbjct: 7 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 66 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 AGQER+ S+ YYRGAA A++V+D+T++ ++ W+ + + + N+V+ L GNK D Sbjct: 67 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKD 126 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL-PRVQPTE-NPTGM 183 L R+VT +A +AQEN L F+ETSA T NV+E F + AR++ +++ E +P M Sbjct: 127 LDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 185 >1ZBD-A nrPDB Length = 203 Score = 224 bits (572), Expect = 2e-59, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 91/175 (52%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 K++++G+ GK+S + R+ D F ST+G F +T+ ND +K +IWDTA Sbjct: 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 65 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL 127 G ERY ++ YYRGA I+++D+TN+ SF + W +++ N + L GNK D+ Sbjct: 66 GLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDM 125 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTG 182 D R V++E + A G F E SAK NVK+ F + + T Sbjct: 126 EDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTA 180 >2OCY-C nrPDB Length = 170 Score = 224 bits (571), Expect = 2e-59, Method: Composition-based stats. Identities = 68/167 (40%), Positives = 104/167 (62%), Gaps = 1/167 (0%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 K++L+GD G GKS L++RFV+D+F +TIG F +T+ +N VK ++WDTA Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 60 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL 127 GQER+ ++ YYRGA I+V+DVT++ +F K+W + + N + L GNKSD+ Sbjct: 61 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 120 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 R VTA+ + A+E G+ F+E+SAK NV EIF+ +A+ + Sbjct: 121 E-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 166 >2GF9-A nrPDB Length = 189 Score = 224 bits (571), Expect = 2e-59, Method: Composition-based stats. Identities = 63/171 (36%), Positives = 95/171 (55%), Gaps = 1/171 (0%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + G+ KL+L+G+ GK+S + R+ D F ST+G F +T+ +D +K Sbjct: 14 LVPRGS-DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIK 72 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 +IWDTAGQERY ++ YYRGA ++++D+ NQ SF + W +++ N + L Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVIL 132 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 GNK DL D R V AED + A + G F E SAK NVK++F + + Sbjct: 133 VGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVI 183 >4RKF-A nrPDB Length = 190 Score = 223 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 96/176 (54%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 AA N KL+++G+ GK+S + R+ D F ST+G F +T+ +D VK Sbjct: 15 AADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKL 74 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 +IWDTAG ERY ++ YYRGA I+++DVTN+ SF + WV +++ N + L Sbjct: 75 QIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILV 134 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 GNK D+ D R ++ E + A + G+ F ETSAK NVK +F + + Sbjct: 135 GNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSE 190 >3RAB-A nrPDB Length = 169 Score = 223 bits (569), Expect = 4e-59, Method: Composition-based stats. Identities = 60/166 (36%), Positives = 92/166 (55%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 N K++++G+ GK+S + R+ D F ST+G F +T+ ND +K +IWD Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQERY ++ YYRGA I+++D+TN+ SF + W +++ N + L GNK Sbjct: 61 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC 120 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 D+ D R V++E + A G F E SAK NVK+ F + + Sbjct: 121 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 166 >3DZ8-A nrPDB Length = 191 Score = 223 bits (569), Expect = 4e-59, Method: Composition-based stats. Identities = 59/168 (35%), Positives = 93/168 (55%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 GN KL+++G+ GK+S + R+ D F ST+G F +T+ ++ VK +I Sbjct: 17 QGNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQI 76 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGN 123 WDTAGQERY ++ YYRGA I+++D+TN+ SF + W +++ N + L GN Sbjct: 77 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGN 136 Query: 124 KSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 K D+ + R V E Q A++ G F E SAK +V++ F + + Sbjct: 137 KCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAI 184 >2EW1-A nrPDB Length = 201 Score = 223 bits (569), Expect = 4e-59, Method: Composition-based stats. Identities = 63/170 (37%), Positives = 107/170 (62%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + + K+VL+G+ G GK+ LV RF + F Q +TIG F +T+ +N VK Sbjct: 18 GSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 77 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 +IWDTAGQER+ S+ YYR A A I+ +D+T + SF +W++E++ + ++ L Sbjct: 78 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLV 137 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 GNK DL + R+V+ + A+ +++ ++++ETSAK + NV+++F ++A RL Sbjct: 138 GNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 187 >1Z06-A nrPDB Length = 189 Score = 223 bits (568), Expect = 5e-59, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 5/177 (2%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + G++S K++++GD GK+ L RF +F + E+TIG F + + ++ +K Sbjct: 11 LVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIK 70 Query: 61 FEIWDTAGQERYH-SLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ-GNPNMVM 118 ++WDTAGQER+ S+ YYR A + V+D+TN ASF W++E + ++ Sbjct: 71 IQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPR 130 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAK---TATNVKEIFYEIARRLP 172 L GNK DL A +V + AQ +A + + ETSAK +V+ IF +A +L Sbjct: 131 ILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLK 187 >1YVD-A nrPDB Length = 169 Score = 221 bits (564), Expect = 1e-58, Method: Composition-based stats. Identities = 87/163 (53%), Positives = 115/163 (70%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 K+ LLGD G GKSS+V RFV+D F TIGA+F ++T+ + KF IWDTAGQ Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129 ER+ +LAPMYYRG+AAAIIV+D+T + +F K WV+EL+ G P++V+A+AGNK DL D Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTD 124 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 R+V DA+ YA F+ETSAK A N+ E+F EI+RR+P Sbjct: 125 VREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIP 167 >3BFK-A nrPDB Length = 181 Score = 221 bits (564), Expect = 1e-58, Method: Composition-based stats. Identities = 74/176 (42%), Positives = 114/176 (64%), Gaps = 1/176 (0%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV-NDATVKFEIWD 65 K+VL+GD G GKS+L+ RF +D+F +STIG F ++++ + N+ +K +IWD Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAGQERY ++ YYRGA A++V+D+T + SFE +KW++EL+ + N+V+ L GNKS Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 123 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPT 181 DL R + DA YA++ L F+ETSA ATNV+ F+++ + V+ + T Sbjct: 124 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQAT 179 >3RWM-B nrPDB Length = 185 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 70/168 (41%), Positives = 104/168 (61%), Gaps = 1/168 (0%) Query: 2 AAAG-NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 A G + K+VL+GD G GKS+L+ RF D+F +STIG F ++T+ V + +K Sbjct: 1 GAMGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 60 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 +IWDTAG ERY ++ YYRGA A+IV+D++ +S+E W+ EL+ + N+ + L Sbjct: 61 AQIWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGL 120 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIA 168 GNKSDL R V ++A+ +A EN + F ETSA + NV + F E+ Sbjct: 121 IGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELI 168 >1EK0-A nrPDB Length = 170 Score = 220 bits (562), Expect = 2e-58, Method: Composition-based stats. Identities = 90/166 (54%), Positives = 119/166 (71%), Gaps = 3/166 (1%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + KLVLLG+ GKSS+VLRFV + F E +E TIGAAF +Q + +N+ TVKFEIWDTAGQ Sbjct: 3 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQ 62 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129 ER+ SLAPMYYR A AA++V+DVT SF +A+ WV+EL Q + ++++AL GNK D+L Sbjct: 63 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQ 122 Query: 130 ---ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 RKV E+ + A+E GL F ETSAKT NV ++F I ++P Sbjct: 123 EGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168 >1D5C-A nrPDB Length = 162 Score = 219 bits (558), Expect = 6e-58, Method: Composition-based stats. Identities = 75/162 (46%), Positives = 108/162 (66%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 KLV LG+ GK+S++ RF+ D F +STIG F S+TL +++ V+ ++WDTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129 ER+ SL P Y R +AAAI+V+D+TN+ SFE KW+Q++ + ++++AL GNK+DL D Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 120 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 RKVT E+ AQE F ETSAK N+K +F + A +L Sbjct: 121 LRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 >2G77-B nrPDB Length = 198 Score = 218 bits (555), Expect = 1e-57, Method: Composition-based stats. Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 9/180 (5%) Query: 2 AAAG----NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA 57 A+G +S K++++GD GK+ L RF +F + E+TIG F + + ++ Sbjct: 17 GASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGE 76 Query: 58 TVKFEIWDTAGQERYH-SLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ-GNPN 115 +K ++WDTAGQER+ S+ YYR A + V+D+TN ASF W++E + + Sbjct: 77 RIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAND 136 Query: 116 MVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAK---TATNVKEIFYEIARRLP 172 + L GNK DL A +V + AQ +A + + ETSAK +V+ IF +A +L Sbjct: 137 IPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLK 196 >2F7S-A nrPDB Length = 217 Score = 218 bits (555), Expect = 2e-57, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 11/194 (5%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA----- 57 +G+ KL+ LGD G GK++ + R+ ++F +T+G F + + N Sbjct: 18 GSGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 77 Query: 58 -----TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG 112 V ++WDTAGQER+ SL ++R A +++FD+T+Q SF + W+ +LQA Sbjct: 78 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 137 Query: 113 -NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 N + L GNK+DL D R+V A+ A + G+ + ETSA T NV++ + + Sbjct: 138 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 197 Query: 172 PRVQPTENPTGMVL 185 + + Sbjct: 198 MKRMEQCVEKTQIP 211 >5YOZ-A nrPDB Length = 177 Score = 217 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 79/167 (47%), Positives = 124/167 (74%), Gaps = 1/167 (0%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 ++ +AK+V+LG+ GAGKSS+ LRF +++F+ QE+TIGAAF S+T+ ++ +K+EIWD Sbjct: 11 MEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWD 70 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAG ER+ SLAP+YYRGA+ A++V+D+TN S ++A+ W++EL+A +P++++ L GNK Sbjct: 71 TAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKK 130 Query: 126 DLLDARKVTAEDAQTY-AQENGLFFMETSAKTATNVKEIFYEIARRL 171 DL R+V+ ED Q A+E F E SAK NV+++F ++A +L Sbjct: 131 DLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLAAKL 177 >2FFQ-A nrPDB Length = 171 Score = 217 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 69/164 (42%), Positives = 109/164 (66%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 KLV LG+ GK+SL+ RF+ D F ++TIG F S+T+ + D TV+ ++WDTAGQ Sbjct: 2 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129 ER+ SL P Y R + A++V+D+TN SF++ KW+ +++ + ++++ L GNK+DL D Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLAD 121 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 R++T E+ + A+E + F+ETSAKT NVK++F +A L Sbjct: 122 KRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALLE 165 >2HUP-A nrPDB Length = 201 Score = 217 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 1/170 (0%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 KLVL+GD GK+ +V RF F E Q STIG F +TL + VK + Sbjct: 22 PDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQ 81 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 IWDTAGQER+ ++ YYR A AI+ +D+T ++SF W+++++ N+V L G Sbjct: 82 IWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIG 141 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFF-METSAKTATNVKEIFYEIARRL 171 NKSDL + R+V+ +AQ+ A+ + +ETSAK ++NV+E F +A L Sbjct: 142 NKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 191 >3TSO-A nrPDB Length = 178 Score = 216 bits (551), Expect = 4e-57, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 108/166 (65%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 + + K+VL+G+ G GK++L+ RF +++F +TIG F ++T+ + A VK +IWD Sbjct: 6 DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 65 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAG ERY ++ YYRGA A++VFD+T ++ ++W++EL +V+ L GNKS Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 125 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 DL AR+V E+A+ +A+ NGL F+ETSA +TNV+ F + + + Sbjct: 126 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEI 171 >1X3S-A nrPDB Length = 195 Score = 216 bits (551), Expect = 5e-57, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 8/185 (4%) Query: 2 AAAGNKS---INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 58 ++G K++++G+ G GKSSL+LRF D F +TIG F +T++V+ Sbjct: 4 GSSGMDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNK 63 Query: 59 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVM 118 K IWDTAGQER+ +L P YYRGA I+V+DVT + +F + W+ EL+ N ++ Sbjct: 64 AKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIV 123 Query: 119 -ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRV 174 L GNK D + R+V + +A+++ + F+E SAKT V+ F E+ ++ P + Sbjct: 124 NMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 182 Query: 175 QPTEN 179 +EN Sbjct: 183 WESEN 187 >6HUF-A nrPDB Length = 182 Score = 216 bits (550), Expect = 7e-57, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 97/176 (55%), Gaps = 1/176 (0%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + G+ K + LGD G GK+S++ ++ +F +T+G F +T+ ND +K Sbjct: 1 GSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG-NPNMVMAL 120 ++WDTAG ER+ SL ++R A +++FD+TN+ SF + W+ +L+ + N + L Sbjct: 61 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPDIVL 120 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 GNKSDL D R V A +A+ A+ G+ + ETSA TN+ + + + + Sbjct: 121 CGNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKRME 176 >1YZU-A nrPDB Length = 170 Score = 215 bits (549), Expect = 8e-57, Method: Composition-based stats. Identities = 64/167 (38%), Positives = 111/167 (66%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G+++ + K+VLLG+ GK+SLVLR+ +++F + +T+ A+F ++ L + V IW Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 60 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DTAGQER+H+L P+YYR + AI+V+D+T++ SF++ K WV+EL+ + + + GNK Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 120 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 DL R V+ ++A++YA+ G TSAK ++E+F ++ +R+ Sbjct: 121 IDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 167 >6IF2-B nrPDB Length = 186 Score = 215 bits (548), Expect = 9e-57, Method: Composition-based stats. Identities = 67/171 (39%), Positives = 99/171 (57%), Gaps = 1/171 (0%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 + KL+++GD G GKSSL+LRF + F +TIG F +T+ +N VK +IWD Sbjct: 10 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 69 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 TAG ER+ ++ YYRG I+V+DVT+ SF K+W+ E+ Q ++ L GNK+ Sbjct: 70 TAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNKN 128 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 D + + V EDA +A + G+ ETSAK NV+E+F I + R + Sbjct: 129 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKK 179 >4KLZ-A nrPDB Length = 173 Score = 215 bits (547), Expect = 1e-56, Method: Composition-based stats. Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 2/172 (1%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 S KLV+LG G GKS++ ++F+ +F E + TI A+ + + ++D +I DTA Sbjct: 3 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTA 61 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSD 126 GQ + ++ Y R II + +T++ SF +++ Q + + + + + L GNKSD Sbjct: 62 GQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSD 121 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTE 178 L R+VT E+ A+E F ETSA + ++F+ + R + R + Sbjct: 122 LKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKEKEA 173 >2GIL-A nrPDB Length = 162 Score = 214 bits (546), Expect = 2e-56, Method: Composition-based stats. Identities = 67/159 (42%), Positives = 107/159 (67%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 KLV LG+ GK+SL+ RF+ D F ++TIG F S+T+ + D TV+ ++WDTAGQ Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129 ER+ SL P Y R + A++V+D+TN SF++ KW+ +++ + ++++ L GNK+DL D Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLAD 120 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIA 168 R+V+ E+ + A+E + F+ETSAK NVK++F +A Sbjct: 121 KRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 159 >5UWI-A nrPDB Length = 237 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 7/199 (3%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAA G + KLVL+GD G GK++ V R + +F + +T+G N +K Sbjct: 22 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 81 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F +WDTAGQE++ L YY A AII+FDVT++ +++ W ++L + N+ + L Sbjct: 82 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVL 140 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPT 177 GNK D+ D RKV A+ + ++ L + + SAK+ N ++ F +AR+L P ++ Sbjct: 141 CGNKVDIKD-RKVKAKSIV-FHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV 198 Query: 178 ENPTGMVLPDRAMDRAVSS 196 P + P+ MD A+++ Sbjct: 199 AMP-ALAPPEVVMDPALAA 216 >2N1B-A nrPDB Length = 261 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 67/199 (33%), Positives = 110/199 (55%), Gaps = 7/199 (3%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAA G + KLVL+GD G GK++ V R + +F + +T+G N +K Sbjct: 42 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 101 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F +WDTAGQE++ L YY A AII+FDVT++ +++ W ++L + N+ + L Sbjct: 102 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVL 160 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPT 177 GNK D+ D RKV A+ + ++ L + + SAK+ N ++ F +AR+L P ++ Sbjct: 161 CGNKVDIKD-RKVKAKSIV-FHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV 218 Query: 178 ENPTGMVLPDRAMDRAVSS 196 P + P+ MD A+++ Sbjct: 219 AMP-ALAPPEVVMDPALAA 236 >5CM8-B nrPDB Length = 203 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 62/183 (33%), Positives = 108/183 (59%), Gaps = 5/183 (2%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G G GKS+L L+F+ D+FVE E T ++ + + ++ V+ +I DTAGQE Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGQED 73 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDA 130 Y ++ Y+R + VF +T+ SF+ +++ ++ L+ + + ++ L GNK DL D Sbjct: 74 YAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDK 133 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAM 190 RKV + Q AQ+ + ++ETSAKT NV ++F+++ R + R + TE+ RA Sbjct: 134 RKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREI-RSRKTEDSKAT--SGRAK 190 Query: 191 DRA 193 DR Sbjct: 191 DRC 193 >6IYB-A nrPDB Length = 199 Score = 211 bits (538), Expect = 2e-55, Method: Composition-based stats. Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 7/197 (3%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 M + K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V Sbjct: 4 MGSTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 63 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NM 116 +IWDTAG ER+ S +YRGA ++VFDVT +F+ W E Q +P N Sbjct: 64 MQIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 122 Query: 117 VMALAGNKSDLLDARKVTAEDAQTYA-QENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 + GNK DL + R+V + AQ + +N + + ETSAK A NV++ F IAR + + Sbjct: 123 PFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 181 Query: 176 PTENPTGMVLPDRAMDR 192 +D+ Sbjct: 182 TEVELYNEFPEPIKLDK 198 >4QXA-A nrPDB Length = 208 Score = 211 bits (537), Expect = 2e-55, Method: Composition-based stats. Identities = 65/178 (36%), Positives = 98/178 (55%), Gaps = 6/178 (3%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 KS K++LLGD G GKSSL+ R+V ++F TIG F ++ L V+ V + Sbjct: 1 MMAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQ 60 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVM 118 IWDTAG ER+ SL +YRG+ ++ F V + SF+ W +E + + Sbjct: 61 IWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 120 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARRLPRVQ 175 + GNK+D+ R+V+ E+AQ + ++NG + ETSAK +TNV F E RR+ + Sbjct: 121 VILGNKTDIK-ERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATE 177 >1WMS-A nrPDB Length = 177 Score = 210 bits (536), Expect = 2e-55, Method: Composition-based stats. Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 6/177 (3%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 KS K++LLGD G GKSSL+ R+V ++F TIG F ++ L V+ V +I Sbjct: 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVMA 119 WDTAGQER+ SL +YRG+ ++ F V + SF+ W +E + + Sbjct: 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120 Query: 120 LAGNKSDLLDARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARRLPRVQ 175 + GNK D+ R+V+ E+AQ + ++NG + ETSAK ATNV F E RR+ + Sbjct: 121 ILGNKIDI-SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176 >2OCB-A nrPDB Length = 180 Score = 210 bits (536), Expect = 3e-55, Method: Composition-based stats. Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 6/178 (3%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 KS+ K++LLGD G GKSSL+ R+V ++F TIG F ++ L V+ V +IW Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----QAQGNPNMVMAL 120 DTAGQER+ SL +YRGA ++ F V ++ SFE W +E + + + Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 GNK D + R+VT E+AQT+ ENG ++ETSAK TNV F E R++ V+ Sbjct: 122 LGNKVD-KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178 >5CLL-A nrPDB Length = 191 Score = 210 bits (536), Expect = 3e-55, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 106/195 (54%), Gaps = 7/195 (3%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 MAA G + KLVL+GD G GK++ V R + +F + +T+G N +K Sbjct: 1 MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK 60 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F +WDTAGQE++ L YY A AII+FDVT++ +++ W ++L + N+ + L Sbjct: 61 FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVL 119 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPT 177 GNK D+ D RKV A+ + ++ L + + SAK+ N ++ F +AR+L P ++ Sbjct: 120 CGNKVDIKD-RKVKAKSIV-FHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV 177 Query: 178 ENPTGMVLPDRAMDR 192 P + P+ MD Sbjct: 178 AMP-ALAPPEVVMDP 191 >2IEY-A nrPDB Length = 195 Score = 210 bits (535), Expect = 3e-55, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 11/185 (5%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA------ 57 G+ KL+ LGD G GK++ + R+ ++F +T+G F + + + Sbjct: 5 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGAS 64 Query: 58 ----TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG- 112 V ++WDTAG ER+ SL ++R A +++FD+T+Q SF + W+ +LQA Sbjct: 65 GKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 124 Query: 113 NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 N + L GNK+DL D R+V A+ A++ G+ + ETSA T NV++ + + Sbjct: 125 CENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIM 184 Query: 173 RVQPT 177 + Sbjct: 185 KRMEK 189 >2IEZ-A nrPDB Length = 220 Score = 210 bits (535), Expect = 3e-55, Method: Composition-based stats. Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 11/193 (5%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA------ 57 G+ KL+ LGD G GK++ + R+ ++F +T+G F + + + Sbjct: 5 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGAS 64 Query: 58 ----TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG- 112 V ++WDTAG ER+ SL ++R A +++FD+T+Q SF + W+ +LQA Sbjct: 65 GKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 124 Query: 113 NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 N + L GNK+DL D R+V A+ A++ G+ + ETSA T NV++ + + Sbjct: 125 CENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIM 184 Query: 173 RVQPTENPTGMVL 185 + V Sbjct: 185 KRMEKCVEKTQVP 197 >3BC1-A nrPDB Length = 195 Score = 210 bits (535), Expect = 4e-55, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 11/185 (5%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN------- 55 + G+ K + LGD G GK+S++ ++ +F +T+G F + + Sbjct: 4 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGA 63 Query: 56 ---DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG 112 + ++WDTAG ER+ SL ++R A +++FD+TN+ SF + W+ +LQ Sbjct: 64 VGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHA 123 Query: 113 -NPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 + N + L GNKSDL D R V E+A+ A++ G+ + ETSA TN+ + + Sbjct: 124 YSENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDLI 183 Query: 172 PRVQP 176 + Sbjct: 184 MKRME 188 >2IL1-A nrPDB Length = 192 Score = 209 bits (533), Expect = 5e-55, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 99/175 (56%), Gaps = 1/175 (0%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + +++++G G GK+SL+ RF D F E +ST+G F +T+ + ++ Sbjct: 18 GSPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRL 77 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 +IWDTAGQER++S+ YYR A I+V+D+T + +F+ KW++ + + + + L Sbjct: 78 QIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLV 137 Query: 122 GNKSDLLDARKVTAEDAQTYAQEN-GLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 GNK D R++T + + +AQ+ G+ F E SAK NV EIF ++ + + Sbjct: 138 GNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >5LDD-C nrPDB Length = 207 Score = 208 bits (531), Expect = 1e-54, Method: Composition-based stats. Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 6/187 (3%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + + K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V Sbjct: 2 SMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTM 61 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMV 117 ++WDTAGQER+ SL +YRGA ++VFDV N SF+ W E Q +P N Sbjct: 62 QLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFP 121 Query: 118 MALAGNKSDLLDA-RKVTAEDAQTYAQEN-GLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 + G K D+ ++ R ++ + AQT+ Q G+ + ETSAK A NV+E F IAR + Sbjct: 122 FVVLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQE 181 Query: 176 PTENPTG 182 +E +G Sbjct: 182 ESEEFSG 188 >4M8N-E nrPDB Length = 199 Score = 208 bits (529), Expect = 2e-54, Method: Composition-based stats. Identities = 58/170 (34%), Positives = 95/170 (55%), Gaps = 3/170 (1%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G KLV+LG G GKS+L ++FV+ FVE + TI ++ Q + V+ EI Sbjct: 1 GPHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDAQQCMLEIL 59 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGN 123 DTAG E++ ++ +Y + +V+ +T Q++F + ++ L+ + ++ M L GN Sbjct: 60 DTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGN 119 Query: 124 KSDLLDARKVTAEDAQTYAQEN-GLFFMETSAKTATNVKEIFYEIARRLP 172 K DL D R V E Q A++ F+E+SAK+ NV EIFY++ R++ Sbjct: 120 KCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQIN 169 >4DXA-A nrPDB Length = 169 Score = 204 bits (519), Expect = 3e-53, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 3/166 (1%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 KLV+LG VG GKS+L ++FV+ FVE + TI ++ Q + V+ EI DTAG Sbjct: 5 EYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQ-VEVDAQQCMLEILDTAGT 63 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLL 128 E++ ++ +Y + +V+ +T Q++F + ++ L+ + ++ M L GNK DL Sbjct: 64 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLE 123 Query: 129 DARKVTAEDAQTYAQEN-GLFFMETSAKTATNVKEIFYEIARRLPR 173 D R V E Q A++ F+E+SAK+ NV EIFY++ R++ R Sbjct: 124 DERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR 169 >2KE5-A nrPDB Length = 174 Score = 203 bits (516), Expect = 6e-53, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 105/170 (61%), Gaps = 3/170 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G G GKS+L L+F+ D+FVE E T ++ + + ++ V+ +I DTAG E Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGLED 63 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPN-MVMALAGNKSDLLD 129 Y ++ Y+R ++VF +T SF ++ ++ L+ + + + + + GNKSDL + Sbjct: 64 YAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEE 123 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 R+V E+A++ A+E G+ ++ETSAKT NV ++F+++ R + + +EN Sbjct: 124 RRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSEN 173 >5C2K-A nrPDB Length = 415 Score = 202 bits (515), Expect = 6e-53, Method: Composition-based stats. Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 16/195 (8%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 ++G +I KLV++GD GK+ L++ F KDQF E T+ + + V+ V+ Sbjct: 4 GSSGMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVEL 62 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMAL 120 +WDTAGQE Y L P+ Y ++ F + + S E KW E++ PN+ + L Sbjct: 63 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIIL 121 Query: 121 AGNKSDLLDA----RK--------VTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEI 167 GNK DL + R+ V E+ + A G F +ME SAKT V+E+F Sbjct: 122 VGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 181 Query: 168 ARRLPRVQPTENPTG 182 R + + + +G Sbjct: 182 TRAALQARRGKKKSG 196 >1ZC4-A nrPDB Length = 175 Score = 201 bits (513), Expect = 1e-52, Method: Composition-based stats. Identities = 55/167 (32%), Positives = 99/167 (59%), Gaps = 2/167 (1%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G G GKS+L L+F+ D+FVE E T ++ + + ++ V+ +I DTAG E Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGLED 66 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDA 130 Y ++ Y+R + VF +T SF + ++ L+ + + N+ L GNKSDL D Sbjct: 67 YAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDK 126 Query: 131 RKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 R+V+ E+A+ A++ + ++ETSAKT NV ++F+++ R + + Sbjct: 127 RQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKME 173 >3WYF-A nrPDB Length = 219 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 7/192 (3%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 AA + KLVL+GD G GK++ V R + +F + +TIG + N +KF+ Sbjct: 5 AANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFD 64 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 +WDTAG E++ L YY A AII+FDVT++ +++ W ++L + N+ + L G Sbjct: 65 VWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCG 123 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPTEN 179 NK D+ RKV A+ T+ ++ L + + SAK+ N ++ F +AR+L P+++ + Sbjct: 124 NKVDVK-ERKVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVAS 181 Query: 180 PTGMVLPDRAMD 191 P + P+ +D Sbjct: 182 P-ALAPPEVQVD 192 >4PHF-A nrPDB Length = 184 Score = 196 bits (500), Expect = 3e-51, Method: Composition-based stats. Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 7/174 (4%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV-KF 61 + K K+++LGD G GK+SL+ R+V D++ ++TIGA F ++ + V+ V Sbjct: 3 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATM 62 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN----MV 117 ++WDTAGQER+ SL +YRGA ++V+DVTN +SFE K W E N N Sbjct: 63 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 122 Query: 118 MALAGNKSDLLDARK-VTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIAR 169 + GNK D +++K V+ + AQ A+ G + TSAK A NV F EIAR Sbjct: 123 FVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIAR 176 >3TH5-A nrPDB Length = 204 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 16/175 (9%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K V++GD GK+ L++ + + F T+ + S + V+ V +WDTAGQE Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGQE 89 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLLD 129 Y L P+ Y +I F + + ASFE + KW E++ PN + L G K DL D Sbjct: 90 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH-CPNTPIILVGTKLDLRD 148 Query: 130 AR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARRL 171 + +T A+E G + ++E SA T +K +F E R + Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 203 >2P5S-A nrPDB Length = 199 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 6/169 (3%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K+VL GD GKSS ++R K++F E +T+G F +TL V+ ++WDTAGQE Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQE 88 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD- 129 R+ S+A Y+R A ++++DVT + SF ++WV ++ + + + L GNK+D+ D Sbjct: 89 RFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDT 148 Query: 130 -----ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 + V + A G F ETSAK +N+ E +AR + + Sbjct: 149 AATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKK 197 >1Z22-A nrPDB Length = 168 Score = 195 bits (495), Expect = 1e-50, Method: Composition-based stats. Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 1/163 (0%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 + K+V++G+ GKSS++ R+ K F + + TIG F + + VND V+ +WDTA Sbjct: 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTA 62 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL 127 GQE + ++ YYRGA A ++VF T++ SFE W +++ A+ ++ AL NK DL Sbjct: 63 GQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-DIPTALVQNKIDL 121 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARR 170 LD + E+A+ A+ L F TS K NV E+F +A + Sbjct: 122 LDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEK 164 >5ZHX-e nrPDB Length = 198 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 16/189 (8%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 +I KLV++GD GK+ L++ F KDQF E T+ + + V+ V+ +WDTA Sbjct: 8 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 66 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSD 126 GQE Y L P+ Y ++ F + + S E KW E++ PN+ + L GNK D Sbjct: 67 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 125 Query: 127 LLDA----RK--------VTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRLPR 173 L + R+ V E+ + A G F +ME SAKT V+E+F R + Sbjct: 126 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 185 Query: 174 VQPTENPTG 182 + + +G Sbjct: 186 ARRGKKKSG 194 >3RYT-C nrPDB Length = 180 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 16/175 (9%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K V++GD GK+ L++ + + F T+ + S + V+ V +WDTAG E Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGLE 65 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLLD 129 Y L P+ Y +I F + + ASFE + KW E++ PN + L G K DL D Sbjct: 66 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH-CPNTPIILVGTKLDLRD 124 Query: 130 AR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARRL 171 + +T A+E G + ++E SA T +K +F E R + Sbjct: 125 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 179 >2J0V-A nrPDB Length = 212 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 17/200 (8%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + + S K V +GD GK+ +++ + ++F T+ F S +AV+ V Sbjct: 1 GSHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGQIVNL 59 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMAL 120 +WDTAGQE Y L P+ YRGA ++ F + ++AS+E KKW+ EL+ PN+ + L Sbjct: 60 GLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFA-PNVPIVL 118 Query: 121 AGNKSDLLDAR--------KVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRL 171 G K DL D + +T+ + ++ G ++E S+KT NVK +F + + Sbjct: 119 VGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVV 178 Query: 172 PRVQPTENPTGMVLPDRAMD 191 + P +P R + Sbjct: 179 L-----QPPRRKEVPRRRKN 193 >2WBL-C nrPDB Length = 180 Score = 193 bits (492), Expect = 4e-50, Method: Composition-based stats. Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 14/175 (8%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K V +GD GK+ +++ + + F T+ F S + V+ +TV +WDTAGQE Sbjct: 7 IKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQE 65 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSDLLD 129 Y+ L P+ YRGA ++ F + ++AS+E KKW+ EL+ P + + L G K DL D Sbjct: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYA-PGIPIVLVGTKLDLRD 124 Query: 130 ARK----------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARRLPR 173 ++ +T + + G + ++E S+KT NVK +F R R Sbjct: 125 DKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179 >2NTY-C nrPDB Length = 180 Score = 192 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 14/174 (8%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 S K V +GD GK+ +++ + + F T+ F S + V+ TV +WDTA Sbjct: 4 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTA 62 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSD 126 GQE Y+ L P+ YRGA I+ F + ++AS+E KKW+ EL+ P + + L G K D Sbjct: 63 GQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLD 121 Query: 127 LLDARK----------VTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIAR 169 L D ++ +T + + G ++E S+KT NVK +F + Sbjct: 122 LRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIK 175 >5XOJ-A nrPDB Length = 182 Score = 192 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 61/181 (33%), Positives = 102/181 (56%), Gaps = 6/181 (3%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 AA + KLVL+GD G GK++ V R + +F + +TIG + N +KF+ Sbjct: 5 AANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFD 64 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 +WDTAG E++ L YY A AII+FDVT++ +++ W ++L + N+ + L G Sbjct: 65 VWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCG 123 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL---PRVQPTEN 179 NK D+ RKV A+ T+ ++ L + + SAK+ N ++ F +AR+L P+++ + Sbjct: 124 NKVDVK-ERKVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVAS 181 Query: 180 P 180 P Sbjct: 182 P 182 >2FN4-A nrPDB Length = 181 Score = 192 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 2/159 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++F++ FV + TI ++ ++ +V+ + +I DTAGQE + ++ Y R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSY-TKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 83 AAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 ++VF + ++ SF K + L+ + + + L GNK+DL R+V +A + Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAF 140 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 + + + E SAK NV E F ++ R + + Q E P Sbjct: 141 GASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELP 179 >5WDR-A nrPDB Length = 171 Score = 192 bits (489), Expect = 8e-50, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 2/153 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ ++ FV + TI ++ + ++++D +I DTAGQE Y ++ Y R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYR-KHVSIDDEACLLDILDTAGQEDYSAMRDQYMRT 78 Query: 83 AAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + V+ + +Q S + + ++ L+ + + M L GNK DL + R+V+ E Q Sbjct: 79 GEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMILVGNKCDLEEHREVSTEAGQAV 138 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 A+ + FMETSAK NV+E FY++ R + + Sbjct: 139 AKSYSIPFMETSAKKRINVEEAFYQLVREIRKY 171 >2ATV-A nrPDB Length = 196 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 60/174 (34%), Positives = 92/174 (52%), Gaps = 4/174 (2%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 KS KL + G G GKS+LV+RF+ +F+ + T+ + + Q ++D V EI DT Sbjct: 25 KSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQA-TIDDEVVSMEILDT 83 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP-NMVMALAGNKS 125 AGQE + R ++V+D+T++ SFE L P N+ + L GNK+ Sbjct: 84 AGQED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKA 142 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTAT-NVKEIFYEIARRLPRVQPTE 178 DL +R+V+ E+ + A E F E SA T N+ EIFYE+ R + R + + Sbjct: 143 DLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMVQ 196 >5JCP-B nrPDB Length = 419 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 16/176 (9%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 +I KLV++GD GK+ L++ KDQF E T+ + + V+ V+ +WDTA Sbjct: 241 AIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 299 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSD 126 GQE Y L P+ Y ++ F + + S E KW E++ PN+ + L GNK D Sbjct: 300 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 358 Query: 127 LLDA----RK--------VTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIAR 169 L + R+ V E+ + A G F +ME SAKT V+E+F R Sbjct: 359 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 414 >2W2X-A nrPDB Length = 185 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 18/184 (9%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + G+++I K V++GDV GK+ L++ + + F T+ + S + V+ V Sbjct: 3 GSGGSQAI--KCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDSKPVNL 59 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMAL 120 +WDTAGQE Y L P+ Y +I F + + AS+E + KW E++ P+ + L Sbjct: 60 GLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHH-CPSTPIIL 118 Query: 121 AGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEI 167 G K DL D + +T A+E + ++E SA T +K +F E Sbjct: 119 VGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEA 178 Query: 168 ARRL 171 R + Sbjct: 179 IRAV 182 >2WKQ-A nrPDB Length = 332 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 16/176 (9%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 K V++GD GK+ L++ + + F T+ + S + V+ V +WDTAG Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGL 213 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ Y +I F + + ASF + KW E++ PN + L G K DL Sbjct: 214 EDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHH-CPNTPIILVGTKLDLR 272 Query: 129 DAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARRL 171 D + +T A+E G + ++E SA T +K +F E R + Sbjct: 273 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 328 >4WA7-A nrPDB Length = 170 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 48/156 (30%), Positives = 85/156 (54%), Gaps = 3/156 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAG E Y ++ Y R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGLEEYSAMRDQYMRT 75 Query: 83 AAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SFE + +++ + + + ++ M L GNK DL +R V + AQ Sbjct: 76 GEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SRTVDTKQAQDL 134 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 A+ G+ F+ETSAKT V + FY + R + + + Sbjct: 135 ARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >2CJW-A nrPDB Length = 192 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 57/187 (30%), Positives = 96/187 (51%), Gaps = 11/187 (5%) Query: 11 AKLVLLGDVGAGKSSLVLRF--VKDQFVEFQESTIGAAFFSQTLAVNDAT---VKFEIWD 65 ++VL+G+ G GKS+L F V D E +G + +TL V+ + + ++W+ Sbjct: 7 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCE-VLGEDTYERTLMVDGESATIILLDMWE 65 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQ-AQGNPNMVMALAGNK 124 G+ + L + A +IV+ +T++ASFE+A + +L+ A+ ++ + L GNK Sbjct: 66 NKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNK 123 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR--RLPRVQPTENPTG 182 SDL+ R+V+ + + A F+ETSA NVKE+F I R RL R +N Sbjct: 124 SDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKNERR 183 Query: 183 MVLPDRA 189 + R Sbjct: 184 LAYQKRK 190 >3BWD-D nrPDB Length = 182 Score = 190 bits (483), Expect = 3e-49, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 14/174 (8%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 S K V +GD GK+ L++ + + F T+ F S + VN ATV +WDTA Sbjct: 6 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGATVNLGLWDTA 64 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSD 126 GQE Y+ L P+ YRGA I+ F + ++AS+E KKW+ EL+ P + + L G K D Sbjct: 65 GQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIVLVGTKLD 123 Query: 127 LLDARK----------VTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIAR 169 L D ++ +T + + G ++E S+K+ NVK +F R Sbjct: 124 LRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIR 177 >2ERY-A nrPDB Length = 172 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++F++ FV + TI ++ Q + ++D + +I DTAGQE + ++ Y R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCV-IDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 83 AAAAIIVFDVTNQASFERAKKW-VQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 ++VF VT++ SFE K+ Q L+ + M L GNK+DL R+VT E+ Q Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQL 136 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 A++ + +ME SAK NV + F+E+ R + + Q Sbjct: 137 ARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >4KU4-A nrPDB Length = 206 Score = 189 bits (481), Expect = 5e-49, Method: Composition-based stats. Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 20/194 (10%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 + G I K+ +LG+ G GK+SL + K F E + T+ ++ Q + ++ E Sbjct: 7 SPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCV-IDGIPSHLE 65 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL----------QAQG 112 I DTAGQE Y +L + R +IVFDVT ++SFE A++ +E+ + Sbjct: 66 ILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHP 125 Query: 113 NPNMV---------MALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEI 163 + L GNK DL R+V + + A++ G F+ETSAK TNV+E Sbjct: 126 GDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEEA 185 Query: 164 FYEIARRLPRVQPT 177 F+ + R R + Sbjct: 186 FFSVVRADRRRKRE 199 >2J1L-A nrPDB Length = 214 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 18/182 (9%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 A G +S+ K+VL+GD G GK+SL++ F F E T+ + L V V Sbjct: 28 APPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHL 84 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMAL 120 IWDTAGQ+ Y L P++Y A+ ++ FDVT+ SF+ +W E+ + + + Sbjct: 85 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIV 143 Query: 121 AGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEI 167 G K+DL + VT Q A+ G + ++E SA+ NV +F E Sbjct: 144 VGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 203 Query: 168 AR 169 A Sbjct: 204 AE 205 >4CZ2-A nrPDB Length = 230 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 11/204 (5%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT-VKFEIWD 65 + K++++G++G GK+S++ R+V F + +TIG F + L + T V+ ++WD Sbjct: 27 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 86 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PN---MVMALA 121 AG ER+ ++ +YY+ A A +VFD++ ++FE KW +L ++ + PN + L Sbjct: 87 IAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 146 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRL----PRVQP 176 NK D ++ + +E+G + ETSAK N++E + ++ Sbjct: 147 ANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSFPN 206 Query: 177 TENPTGMVLPDRAMDRAVSSS-CC 199 EN + D+ RA + S CC Sbjct: 207 EENDVDKIKLDQETLRAENKSQCC 230 >3CBQ-A nrPDB Length = 195 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 2/171 (1%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 G K K++L+G+ G GKS+L F Q E + + + V+ V + Sbjct: 17 QGQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVV 76 Query: 64 WDTAGQ-ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA-QGNPNMVMALA 121 +D Q + L + A +IVF VT++ SF + + + L+A + + ++ + L Sbjct: 77 YDIWEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILV 136 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 GNKSDL +R+V+ E+ + A +ETSA N +E+F R++ Sbjct: 137 GNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIR 187 >2ERX-A nrPDB Length = 172 Score = 188 bits (478), Expect = 2e-48, Method: Composition-based stats. Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 3/160 (1%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + ++ + G G GKSSLVLRFVK F E T+ + Q ++ + + +I DT G Sbjct: 3 DYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTV-EDTYRQVISCDKSICTLQITDTTGS 61 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL-QAQGN-PNMVMALAGNKSDL 127 ++ ++ + A I+V+ +T++ S E K +++ + +G+ ++ + L GNK D Sbjct: 62 HQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDE 121 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 +R+V + +A+ A+ FMETSAK NVKE+F E+ Sbjct: 122 SPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQEL 161 >2ATX-A nrPDB Length = 194 Score = 188 bits (478), Expect = 2e-48, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 16/180 (8%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 A G ++ K V++GD GK+ L++ + D F E T+ + ++ V Sbjct: 11 AHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLLG 69 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALA 121 ++DTAGQE Y L P+ Y +I F V N ASF+ K +WV EL+ PN+ L Sbjct: 70 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLLI 128 Query: 122 GNKSDLLDA------------RKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIA 168 G + DL D + + E Q A+E G ++E SA T +K +F E Sbjct: 129 GTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI 188 >3CON-A nrPDB Length = 190 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 3/157 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRT 92 Query: 83 AAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SF + +++ + + + ++ M L GNK DL R V + A Sbjct: 93 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHEL 151 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTE 178 A+ G+ F+ETSAKT V++ FY + R + + + + Sbjct: 152 AKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKK 188 >5WDQ-A nrPDB Length = 170 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 48/153 (31%), Positives = 86/153 (56%), Gaps = 3/153 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRT 78 Query: 83 AAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SFE ++ +++ + + + ++ M L GNK D AR V + AQ Sbjct: 79 GEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-AAARTVESRQAQDL 137 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 A+ G+ ++ETSAKT V++ FY + R + + Sbjct: 138 ARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH 170 >2FV8-A nrPDB Length = 207 Score = 186 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 16/175 (9%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 I KLV++GD GK+ L++ F KD+F E T+ + + V+ V+ +WDTAG Sbjct: 24 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAG 82 Query: 69 QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDL 127 QE Y L P+ Y ++ F V + S E KWV E++ PN+ + L NK DL Sbjct: 83 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDL 141 Query: 128 LDARKVTAE------------DAQTYAQENGLF-FMETSAKTATNVKEIFYEIAR 169 V E D + A + ++E SAKT V+E+F R Sbjct: 142 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 196 >4U5X-A nrPDB Length = 178 Score = 186 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 14/171 (8%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K V +GD GK+ +++ + ++F T+ F S ++V+ + V +WDTAG E Sbjct: 6 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGLE 64 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSDLLD 129 Y L P+ YRGA I+ F + ++AS+E KKW+ EL+ P + + L G K DL + Sbjct: 65 DYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLRE 123 Query: 130 ARK----------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIAR 169 R +T E + + G + ++E S+KT N+K +F + Sbjct: 124 DRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIK 174 >1RYH-A nrPDB Length = 203 Score = 186 bits (472), Expect = 7e-48, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 35/194 (18%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K V++GD GK+ L++ + + F T+ + S + V+ V +WDTAGQE Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGQE 64 Query: 71 RYHSLAPMYYRG-------------------AAAAIIVFDVTNQASFERAK-KWVQELQA 110 Y L P+ Y A +I F + + ASFE + KW E++ Sbjct: 65 DYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRH 124 Query: 111 QGNPNMVMALAGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFMETSAKTA 157 PN + L G K DL D + +T A+E G + ++E SA T Sbjct: 125 H-CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ 183 Query: 158 TNVKEIFYEIARRL 171 +K +F E R + Sbjct: 184 RGLKTVFDEAIRAV 197 >3A58-B nrPDB Length = 188 Score = 185 bits (471), Expect = 8e-48, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 16/183 (8%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 M+ SI KLV++GD GK+ L++ K QF E T+ + + V+ V+ Sbjct: 1 MSQQVGNSIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENY-VADVEVDGRRVE 59 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMA 119 +WDTAGQE Y L P+ Y + +I F + S E + KW+ E+ + + Sbjct: 60 LALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPII 118 Query: 120 LAGNKSDLLDARK------------VTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYE 166 L G K DL + + VT+++ Q+ A + G + E SAKT V+E+F Sbjct: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 Query: 167 IAR 169 R Sbjct: 179 ATR 181 >4FMC-F nrPDB Length = 117 Score = 185 bits (471), Expect = 9e-48, Method: Composition-based stats. Identities = 55/115 (47%), Positives = 76/115 (66%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 L+L+GD G GKS L+LRF D + E STIG F +T+ ++ T+K +IWDTAGQER+ Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL 127 ++ YYRGA I+V+DVT+Q SF K+W+QE+ + N+ L GNK DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 115 >5UHV-A nrPDB Length = 166 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 3/153 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++ +++ FV+ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRT 74 Query: 83 AAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 + VF + N SF + +++ + + + ++ M L GNK DL R V + A Sbjct: 75 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLP-TRTVDTKQAHEL 133 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLPRV 174 A+ G+ F+ETSAKT V++ FY + R + + Sbjct: 134 AKSYGIPFIETSAKTRQGVEDAFYTLVREIRQY 166 >2G3Y-A nrPDB Length = 211 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 11/185 (5%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRF--VKDQFVEFQESTIGAAFFSQTLAVNDAT-- 58 ++ + + ++VL+G+ G GKS+L F V D E +G + +TL V+ + Sbjct: 30 SSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCE-VLGEDTYERTLMVDGESAT 88 Query: 59 -VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQ-AQGNPNM 116 + ++W+ G+ + L + A +IV+ +T++ASFE+A + +L+ A+ ++ Sbjct: 89 IILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDI 146 Query: 117 VMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR--RLPRV 174 + L GNKSDL+ R+V+ + + A F+ETSA NVKE+F I R RL R Sbjct: 147 PIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRD 206 Query: 175 QPTEN 179 +N Sbjct: 207 SKEKN 211 >3PIR-A nrPDB Length = 183 Score = 183 bits (466), Expect = 3e-47, Method: Composition-based stats. Identities = 47/153 (30%), Positives = 84/153 (54%), Gaps = 3/153 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++F + FV + TI ++ T +++ ++ DTAGQE + ++ Y R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHT-EIDNQWAILDVLDTAGQEEFSAMREQYMRT 89 Query: 83 AAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 +IV+ VT++ASFE ++ Q L+ + + M L NK DL+ RKVT + + Sbjct: 90 GDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEM 149 Query: 142 AQENGLFFMETSAKT-ATNVKEIFYEIARRLPR 173 A + + ++ETSAK NV + F+++ R + + Sbjct: 150 ATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQ 182 >3VHL-B nrPDB Length = 195 Score = 181 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 20/191 (10%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 ++G ++I K V++GD GK+ L++ + ++F T+ + T+ + Sbjct: 4 GSSGMQTI--KCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMAL 120 ++DTAGQE Y L P+ Y ++ F V + +SFE K KWV E+ P L Sbjct: 61 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLL 119 Query: 121 AGNKSDLLDA------------RKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEI 167 G + DL D + +T E A+ A++ + ++E SA T +K +F E Sbjct: 120 VGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEA 179 Query: 168 ARRLPRVQPTE 178 L ++P E Sbjct: 180 I--LAALEPPE 188 >5ZVP-A nrPDB Length = 181 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 16/176 (9%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 I KLV++GD GK+ L++ K F E T+ + + V+ V+ +WDTA Sbjct: 3 EIRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENY-VADVEVDGKHVELALWDTA 61 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSD 126 GQE Y L P+ Y + +I F + + S + + KW+ E+ + + L G K D Sbjct: 62 GQEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEV-LHFCQGLPIILVGCKKD 120 Query: 127 LLDA------------RKVTAEDAQTYAQENGL-FFMETSAKTATNVKEIFYEIAR 169 L + VT E + ++ G ++E SA+T V+E+F R Sbjct: 121 LRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATR 176 >3T5G-A nrPDB Length = 181 Score = 179 bits (454), Expect = 8e-46, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 18/192 (9%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 +S + K+ +LG GKSSL ++FV+ QFV+ + TI F ++ + VN ++ DT Sbjct: 3 QSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDT 61 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWV-QELQAQGNPNMVMALAGNKS 125 AGQ+ Y Y I+V+ VT+ SFE K + L G + + L GNK Sbjct: 62 AGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKK 121 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVL 185 DL R ++ E+ + A+ F+E+SAK ++F ++L Sbjct: 122 DLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVF----------------RRIIL 165 Query: 186 PDRAMDRAVSSS 197 MD A S Sbjct: 166 EAEKMDGACSQG 177 >3OES-A nrPDB Length = 201 Score = 179 bits (454), Expect = 8e-46, Method: Composition-based stats. Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 2/166 (1%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K+V+LG GK+SL +FV+ +F E + T+ +S+ + + + DTAGQ+ Sbjct: 25 RKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTV-ENTYSKIVTLGKDEFHLHLVDTAGQD 83 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA-QGNPNMVMALAGNKSDLLD 129 Y L + G ++V+ VT+ SF+ + Q+L G + + L GNK+DL Sbjct: 84 EYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSP 143 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 R+V A + + A+ G FME+SA+ + IF ++ + + RV+ Sbjct: 144 EREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIARVE 189 >5VCU-A nrPDB Length = 208 Score = 179 bits (454), Expect = 8e-46, Method: Composition-based stats. Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 21/191 (10%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + K V++GD GK++L++ + F E T+ + ++ + D V ++DTAGQ Sbjct: 11 SIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNY-NKNIPYGDGIVSIALYDTAGQ 69 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLL 128 E Y L P+ Y ++ F + N S E KW +EL+ NP+ + L G K DL Sbjct: 70 EDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELK-HYNPDTPIVLVGTKLDLK 128 Query: 129 DARK------------VTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIA-----RR 170 + VT E Q + ++E SAKT N+ E F +R Sbjct: 129 KDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 Query: 171 LPRVQPTENPT 181 L PT N Sbjct: 189 LKDAPPTANAR 199 >2Q3H-A nrPDB Length = 201 Score = 179 bits (454), Expect = 9e-46, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 16/172 (9%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K VL+GD GK+SLV+ + + + T F S ++V+ V+ ++ DTAGQ+ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNF-SAVVSVDGRPVRLQLCDTAGQD 79 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLLD 129 + L P+ Y ++ F V + +SF+ KWV E++ P + L G +SDL + Sbjct: 80 EFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCH-CPKAPIILVGTQSDLRE 138 Query: 130 A------------RKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIA 168 + V E A+ A+E ++E SA T N+KE+F Sbjct: 139 DVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAI 190 >3Q72-A nrPDB Length = 166 Score = 178 bits (452), Expect = 2e-45, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 3/163 (1%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 K++LLG G GKS+L F + E+ + +++ V+ ++D Q+ Sbjct: 3 YKVLLLGAPGVGKSALARIF--GGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQD 60 Query: 71 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQ-AQGNPNMVMALAGNKSDLLD 129 L A +IV+ VT++ SFE+A + +L+ A+ ++ + L GNKSDL+ Sbjct: 61 GGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVR 120 Query: 130 ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 +R+V+ ++ + A F+ETSA NV+ +F + R++ Sbjct: 121 SREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIR 163 >3Q85-A nrPDB Length = 169 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 2/164 (1%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ- 69 K++L+G+ G GKS+L F Q E + + + V+ V ++D Q Sbjct: 3 FKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQG 62 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA-QGNPNMVMALAGNKSDLL 128 + L + A +IVF VT++ SF + + + L+A + + ++ + L GNKSDL Sbjct: 63 DAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLA 122 Query: 129 DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 +R+V+ E+ + A +ETSA N +E+F R++ Sbjct: 123 RSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIR 166 >3E5H-A nrPDB Length = 178 Score = 176 bits (448), Expect = 4e-45, Method: Composition-based stats. Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 4/175 (2%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVKFEI 63 G+ K+V+LGD +GK+SL F ++ F + + TIG FF + + + V +I Sbjct: 1 GSHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQI 60 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKW---VQELQAQGNPNMVMAL 120 WD GQ + Y GA ++V+D+TN SFE + W V+++ + ++AL Sbjct: 61 WDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVAL 120 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 GNK DL R + E + QENG SAKT +V F ++A + ++ Sbjct: 121 VGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGIK 175 >5XC3-A nrPDB Length = 176 Score = 176 bits (446), Expect = 6e-45, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 97/167 (58%), Gaps = 2/167 (1%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQ-TLAVNDATVKFEIWDTAGQ 69 K++L+G G GKSS+V +F+ ++ + TIGAAF S+ +A N T+K IWDTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDL-L 128 ER+ S+ MYY + ++VFDVT++ SF+ W+ +L+ + + + NK D+ Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDIDK 125 Query: 129 DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 + +V+ + + + ++N ++ S+ + V +F ++ ++ ++ Sbjct: 126 NNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKMIDKMSEIK 172 >4DJT-A nrPDB Length = 218 Score = 176 bits (446), Expect = 7e-45, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 89/169 (52%), Gaps = 1/169 (0%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN-DATVK 60 + + + K+ L+GD G GK++ + R + +F + +T+GA T + +K Sbjct: 3 GSMERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIK 62 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 F +WDTAGQE+ L +YY GA+ AI+ FDVT++ + + +WV+E QA + + Sbjct: 63 FNVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAPIVV 122 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 NK D+ + +K++ + + + E SAKTA N F +AR Sbjct: 123 CANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLAR 171 >3RAP-R nrPDB Length = 167 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KS+L ++FV F+E + TI F+ + + V+ + EI DTAG E++ S+ +Y + Sbjct: 16 KSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 83 AAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY 141 I+V+ + NQ SF+ K ++ + + + + L GNK DL R+V++ + + Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRAL 134 Query: 142 AQENGLFFMETSAKTATNVKEIFYEIARRLP 172 A+E G FMETSAK+ T V E+F EI R++ Sbjct: 135 AEEWGCPFMETSAKSKTMVDELFAEIVRQMN 165 >6FF8-A nrPDB Length = 181 Score = 173 bits (440), Expect = 4e-44, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 6/175 (3%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT-VKF 61 + + K++++G++G GK+S++ R+V F + +TIG F + L + T V+ Sbjct: 1 SMETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PN---MV 117 ++WD AG ER+ ++ +YY+ A A +VFD++ ++FE KW +L ++ + PN + Sbjct: 61 QLWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 120 Query: 118 MALAGNKSDLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRL 171 L NK D + + +E+G + ETSAK N++E + ++ Sbjct: 121 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 175 >3CLV-A nrPDB Length = 208 Score = 173 bits (439), Expect = 5e-44, Method: Composition-based stats. Identities = 79/205 (38%), Positives = 111/205 (54%), Gaps = 40/205 (19%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV----------- 54 K + K VLLG+ GKSS+VLR KD F E +TIGA+F + + + Sbjct: 3 EKKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNN 62 Query: 55 --------------------------NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAII 88 N +KF+IWDTAGQERY S+ P+YYRGA AI+ Sbjct: 63 EKNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIV 122 Query: 89 VFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLF 148 VFD++N + +RAK WV +L+ + N ++ L NK D + +V + Q YAQ+N L Sbjct: 123 VFDISNSNTLDRAKTWVNQLKI--SSNYIIILVANKID-KNKFQVDILEVQKYAQDNNLL 179 Query: 149 FMETSAKTATNVKEIFYEIARRLPR 173 F++TSAKT TN+K IFY +A + + Sbjct: 180 FIQTSAKTGTNIKNIFYMLAEEIYK 204 >4MIT-A nrPDB Length = 186 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 16/183 (8%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 A K + KLV++GD GK+ L++ + +F E T+ + +L ++ Sbjct: 3 AMSEKPTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVV-SLTAGTRQIQLA 61 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALA 121 +WDTAG E Y L P+ Y A+ +I F VT+ S++ KW E+ P + + L Sbjct: 62 LWDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEV-IHFAPKVPIILV 120 Query: 122 GNKSDLLDARKVT---AEDAQTYA----------QENGLFFMETSAKTATNVKEIFYEIA 168 G K D + + E T + + ++E SAKT+ N+K +F E Sbjct: 121 GTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAV 180 Query: 169 RRL 171 + + Sbjct: 181 KTV 183 >2NZJ-A nrPDB Length = 175 Score = 170 bits (430), Expect = 5e-43, Method: Composition-based stats. Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 4/160 (2%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 ++VLLGD G GK+SL F Q + E +G + +TL V+ + DT Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQERDLHEQ-LGEDVYERTLTVDGEDTTLVVVDTWEA 62 Query: 70 ERYHSLAPM--YYRGAAAAIIVFDVTNQASFERAKKWVQELQA-QGNPNMVMALAGNKSD 126 E+ +G +A +IV+ + ++ SFE A + +L+ ++ + L GNK+D Sbjct: 63 EKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD 122 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYE 166 L R+V+ E+ + A F+ETSA NV E+F Sbjct: 123 LARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEG 162 >1GWN-A nrPDB Length = 205 Score = 164 bits (415), Expect = 3e-41, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 91/175 (52%), Gaps = 17/175 (9%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 N+++ K+V++GD GK++L+ F KD F E T+ + + + ++ ++ +WD Sbjct: 24 NQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLWD 82 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNK 124 T+G Y ++ P+ Y + A +I FD++ + + KKW E+Q + PN M L G K Sbjct: 83 TSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ-EFCPNTKMLLVGCK 141 Query: 125 SDLLDA----------RK--VTAEDAQTYAQENGLF-FMETSAKTATN-VKEIFY 165 SDL R+ V+ + A++ G ++E SA + N V++IF+ Sbjct: 142 SDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFH 196 >2GF0-A nrPDB Length = 199 Score = 164 bits (415), Expect = 3e-41, Method: Composition-based stats. Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 4/178 (2%) Query: 23 KSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRG 82 KSSLVLRFVK F + TI + Q ++ + + +I DT G ++ ++ + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTI-EDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 83 AAAAIIVFDVTNQASFERAKKWVQEL-QAQGN-PNMVMALAGNKSDLLDARKVTAEDAQT 140 A I+VF VT++ S E + + Q +G+ ++ + L GNK D R+V +AQ Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-ETQREVDTREAQA 138 Query: 141 YAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRAVSSSC 198 AQE FMETSAK NVKE+F E+ R + N G + V C Sbjct: 139 VAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKC 196 >1M7B-A nrPDB Length = 184 Score = 163 bits (412), Expect = 6e-41, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 17/176 (9%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 N+++ K+V++GD GK++L+ F KD F E T+ + + + ++ ++ +W Sbjct: 2 SNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLW 60 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGN 123 DT+G Y ++ P+ Y + A +I FD++ + + KKW E+Q + PN M L G Sbjct: 61 DTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ-EFCPNTKMLLVGC 119 Query: 124 KSDLLDA----------RK--VTAEDAQTYAQENGLF-FMETSAKTATN-VKEIFY 165 KSDL R+ V+ + A++ G ++E SA + N V++IF+ Sbjct: 120 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFH 175 >3REG-A nrPDB Length = 194 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 6/176 (3%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 N K+V++GD GK+ L+L F K + T+ F S + + +WD Sbjct: 19 NGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENF-SHVMKYKNEEFILHLWD 77 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNK 124 TAGQE Y L P+ Y + ++ F V N+ SF+ KW E++ L G K Sbjct: 78 TAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYI-DTAKTVLVGLK 136 Query: 125 SDLLDA--RKVTAEDAQTYAQENGL-FFMETSAKTATNVKEIFYEIARRLPRVQPT 177 DL VT ++ Q+ G ++E S+ + E+F + + +P Sbjct: 137 VDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNKPV 192 >3C5C-A nrPDB Length = 187 Score = 146 bits (369), Expect = 7e-36, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 6/172 (3%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 + L +LG GAGKS+L ++F+ +F+ + + + S+ V+ V + D Sbjct: 17 QGPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEE-TVDHQPVHLRVMD 75 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP---NMVMALAG 122 TA + + Y A A ++V+ V ++ SF+ + +++ L ++ L G Sbjct: 76 TADLDTPRNCER-YLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLG 134 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTA-TNVKEIFYEIARRLPR 173 NK D+ R+VT + A G F E SA +V+ +F+E R R Sbjct: 135 NKLDMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARR 186 >5C1S-A nrPDB Length = 391 Score = 140 bits (353), Expect = 4e-34, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 11/166 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G K I +L+++G G GK++L D F E +S G + + +++ ++ I Sbjct: 59 GKKEI--RLLVVGSSGVGKTTLC-----DCFFESHQSQ-GEETREKHVQIDNDFIRISIS 110 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKK-WVQELQAQGNPNMVMALAGN 123 D AGQ+ +++ Y G A ++++D+T SF K W+ ++ N + + + GN Sbjct: 111 DIAGQQSFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGN 169 Query: 124 KSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 K D R +T ++A+ +AQ+ F E S K + + +F I+R Sbjct: 170 KKDQEIDRIITRKEAEQFAQDRLCQFYEISTKD-DSCQLLFDCISR 214 Score = 96.1 bits (238), Expect = 1e-20, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 14/178 (7%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLA-VNDATVKFEIW-- 64 I +++++GD GK++ + +F Q+ T G F + +K+EI Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFA------LQDPT-GHDFMNAITTRFEMEKIKYEIIMI 272 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGN 123 D + P R A +IV+D+TN+ SF+ +K+ + + + ++ + G Sbjct: 273 DWGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFS-DVAGVIVGY 331 Query: 124 KSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR--RLPRVQPTEN 179 K+DL RK+T DA T A G ++E S+K + I +A R+ R++ ++ Sbjct: 332 KTDLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIRINRLKIEQS 389 >5HZH-A nrPDB Length = 332 Score = 137 bits (345), Expect = 3e-33, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 15/141 (10%) Query: 45 AAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-K 103 ++ L V +WDTAG E Y L P+ Y +I F + + ASFE + K Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 104 WVQELQAQGNPNMVMALAGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFM 150 W E++ PN + L G K DL D + +T A+E G + ++ Sbjct: 249 WYPEVRHH-CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYL 307 Query: 151 ETSAKTATNVKEIFYEIARRL 171 E SA T +K +F E R + Sbjct: 308 ECSALTQRGLKTVFDEAIRAV 328 Score = 65.2 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVND 56 G K V++GD GK+ L++ + + F T+ + S + V+ Sbjct: 1 GGSMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDG 51 >2REX-B nrPDB Length = 197 Score = 136 bits (343), Expect = 6e-33, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 17/173 (9%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 KLVL+GDV GK++++ KD + E T+ + + L + V+ +WDT+G Sbjct: 10 RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY-TACLETEEQRVELSLWDTSGS 68 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSDLL 128 Y ++ P+ Y + A ++ FD++ + + A KKW E+ P+ + L G K+DL Sbjct: 69 PYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDY-CPSTRVLLIGCKTDLR 127 Query: 129 ------------DARKVTAEDAQTYAQENGLF-FMETSAKTAT-NVKEIFYEI 167 ++ E A++ G ++E SA T+ ++ IF Sbjct: 128 TDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA 180 >3LRP-A nrPDB Length = 181 Score = 134 bits (338), Expect = 2e-32, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 9/173 (5%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 + + +++++G AGK++++ + + V TIG V + F +WD Sbjct: 14 QKKDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVE----TVEFRNISFTVWDV 68 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKS 125 GQ++ L YY I V D ++ + A++ + + + + ++ + NK Sbjct: 69 GGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQ 128 Query: 126 DLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 DL +A +VT + +E F T A + E F + L + Sbjct: 129 DLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWLTTHLNNAK 181 >2YC4-C nrPDB Length = 208 Score = 133 bits (336), Expect = 4e-32, Method: Composition-based stats. Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 11/176 (6%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKD--QFVEFQESTIGAAFFSQTLAVNDATVKFEI-- 63 ++ K+ ++G+ GKS+L+ F +F++ T G + + D TV E+ Sbjct: 18 TLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFL 77 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN----MVMA 119 DTAG + Y Y+ G AI+VFDV++ SFE K W + L++ P+ + Sbjct: 78 LDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKS-ARPDRERPLRAV 136 Query: 120 LAGNKSDLLDAR-KVTAEDAQTYAQENGLFFMETSAK-TATNVKEIFYEIARRLPR 173 L NK+DL R +V + AQ +A N L F + SA + F IA R Sbjct: 137 LVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSANPPGKDADAPFLSIATTFYR 192 >5UF8-A nrPDB Length = 181 Score = 132 bits (332), Expect = 1e-31, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 75/175 (42%), Gaps = 11/175 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + +++++G AGK++++ + + V TIG V + F +W Sbjct: 14 GNKEM--RILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVW 66 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D GQ++ L Y++ I V D ++ A++ +Q++ + + ++ + N Sbjct: 67 DVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFAN 126 Query: 124 KSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 K DL +A ++T + ++ + T A T + E ++ L Sbjct: 127 KQDLPNAMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWLSTNLKNSS 181 >3O47-A nrPDB Length = 329 Score = 131 bits (329), Expect = 3e-31, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 74/175 (42%), Gaps = 11/175 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G K + +++++G AGK++++ + + V TIG V + F +W Sbjct: 162 GKKEM--RILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVW 214 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D GQ++ L Y++ I V D ++ A++ + + A+ + V+ + N Sbjct: 215 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFAN 274 Query: 124 KSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 K DL +A ++T + + + T A + + E ++ +L + Sbjct: 275 KQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 329 >6FAE-B nrPDB Length = 213 Score = 129 bits (326), Expect = 6e-31, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 9/170 (5%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + +++++G AGK++++ + + V TIG V + F +WD GQ Sbjct: 49 SMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVWDVGGQ 103 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLL 128 ++ L Y++ I V D ++ A++ + + A+ + V+ + NK DL Sbjct: 104 DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLP 163 Query: 129 DAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 +A ++T + + + T A + + E ++ +L + Sbjct: 164 NAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 213 >2AL7-A nrPDB Length = 186 Score = 129 bits (326), Expect = 6e-31, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 9/173 (5%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + G+K +L L+G +GK++ V QF E T+G F + + + T+K Sbjct: 14 LVPRGSKE-EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGNVTIK 70 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ-GNPNMVMA 119 IWD GQ R+ S+ Y RG A + + D ++ E ++ + L + + + Sbjct: 71 --IWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVL 128 Query: 120 LAGNKSDLL---DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 + GNK DL D +++ + + Q+ + S K N+ + + Sbjct: 129 VLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQ 181 >5NZV-F nrPDB Length = 181 Score = 129 bits (324), Expect = 9e-31, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 11/173 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + +++++G GAGK++++ + + + TIG V + F +W Sbjct: 14 GNKEM--RILMVGLDGAGKTTVLYKLKLGEVI-TTIPTIGFNVE----TVQYKNISFTVW 66 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D GQ+R SL YYR I V D +++ A++ +Q + + N + N Sbjct: 67 DVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFAN 126 Query: 124 KSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 K DL +A ++T + + F T A + + E ++ L Sbjct: 127 KQDLPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSLKN 179 >4YLG-A nrPDB Length = 173 Score = 128 bits (323), Expect = 1e-30, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 11/171 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G K + +++++G AGK+S++ + + V TIG V + F +W Sbjct: 10 GKKEM--RILMVGLDAAGKTSILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVW 62 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D GQ++ L YY+ A I V D ++ A++ + ++ + N ++ + N Sbjct: 63 DVGGQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFAN 122 Query: 124 KSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 K DL A +VT + + + + A + E +A L Sbjct: 123 KHDLPQAMSISEVTEKLGLQTIKNRKWYCQTSCATNGDGLYEGLDWLADNL 173 >6DFF-C nrPDB Length = 193 Score = 128 bits (323), Expect = 1e-30, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 12/178 (6%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 A G+ +++++G AGK++++ + + V TIG V + F Sbjct: 24 GAMGS---EMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISF 75 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMAL 120 +WD G ++ L Y++ I V D ++ A++ + + A+ + V+ + Sbjct: 76 TVWDVGGLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLV 135 Query: 121 AGNKSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 NK DL +A ++T + + + T A + + E ++ +L + Sbjct: 136 FANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 193 >4ILE-A nrPDB Length = 184 Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 L L+G +GK++ V QF E T+G F + + + T+K WD GQ R+ Sbjct: 25 LTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPRF 80 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ-GNPNMVMALAGNKSDLL--- 128 S+ Y RG +A + + D +Q E +K + L + + + + GNK DL Sbjct: 81 RSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGAL 140 Query: 129 DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 D +++ + + Q+ + S K N+ + + Sbjct: 141 DEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQ 181 >1J2J-A nrPDB Length = 166 Score = 127 bits (320), Expect = 3e-30, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 71/170 (41%), Gaps = 9/170 (5%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + +++++G AGK++++ + + V TIG V + F +WD G Sbjct: 2 SMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVWDVGGL 56 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLL 128 ++ L Y++ I V D ++ A++ + + A+ + V+ + NK DL Sbjct: 57 DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLP 116 Query: 129 DAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 +A ++T + + + T A + + E ++ +L + Sbjct: 117 NAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 166 >2A5F-A nrPDB Length = 175 Score = 127 bits (319), Expect = 4e-30, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 11/167 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + ++++LG AGK++++ + Q T+G F +T+ VKF +W Sbjct: 10 GNKEM--RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVKFNVW 62 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGN 123 D GQ++ L YY G I V D ++ + A+ + + + + + ++ + N Sbjct: 63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFAN 122 Query: 124 KSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 K DL DA ++ + T ++ + + A + + E + Sbjct: 123 KQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 169 >2B6H-A nrPDB Length = 192 Score = 126 bits (316), Expect = 9e-30, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 72/173 (41%), Gaps = 11/173 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G K + +++++G AGK++++ + + V TIG V + F +W Sbjct: 26 GKKQM--RILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNICFTVW 78 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASF-ERAKKWVQELQAQGNPNMVMALAGN 123 D GQ++ L Y++ I V D ++ E A + + LQ + V+ + N Sbjct: 79 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFAN 138 Query: 124 KSDLLDARKVTA---EDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 K D+ +A V+ + + + + T A T + + ++ L + Sbjct: 139 KQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSK 191 >3LVQ-E nrPDB Length = 497 Score = 125 bits (315), Expect = 1e-29, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 9/170 (5%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 G + ++++LG AGK++++ + Q T+G F +T+ VKF Sbjct: 314 GIEGLSNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVKF 368 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMAL 120 +WD GQ++ L YY G I V D ++ + A+ + + + + + ++ + Sbjct: 369 NVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILI 428 Query: 121 AGNKSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 NK DL DA ++ + T ++ + + A + + E + Sbjct: 429 FANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 478 >1Z6X-A nrPDB Length = 180 Score = 125 bits (314), Expect = 1e-29, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 70/173 (40%), Gaps = 11/173 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G K + +++++G AGK++++ + + V TIG V + F +W Sbjct: 14 GKKQM--RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE----TVEYKNICFTVW 66 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGN 123 D GQ+R L Y++ I V D ++ + +Q+ L + V+ L N Sbjct: 67 DVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFAN 126 Query: 124 KSDLLDARKVTA---EDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 K DL +A ++ + + + T A T + E ++ L + Sbjct: 127 KQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSK 179 >6BBQ-A nrPDB Length = 520 Score = 124 bits (313), Expect = 2e-29, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 11/167 (6%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 GNK + ++++LG AGK++++ + Q T+G F +T+ VKF +W Sbjct: 356 GNKEM--RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVKFNVW 408 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGN 123 D G ++ L YY G I V D ++ + A+ + + + + + ++ + N Sbjct: 409 DVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFAN 468 Query: 124 KSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 K DL DA ++ + T ++ + + A + + E + Sbjct: 469 KQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 515 >3AQ4-A nrPDB Length = 184 Score = 124 bits (313), Expect = 2e-29, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 68/166 (40%), Gaps = 9/166 (5%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 +++++G AGK++++ + + V TIG V + F +WD GQ Sbjct: 20 EMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVE----TVEYKNISFTVWDVGGQ 74 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLL 128 ++ L Y++ I V D ++ A+ + + + + V+ + NK DL Sbjct: 75 DKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP 134 Query: 129 DAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 +A ++T + ++ + T A + + E ++ + Sbjct: 135 NAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 180 >2IWR-A nrPDB Length = 178 Score = 121 bits (303), Expect = 3e-28, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 13/176 (7%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 +L +LGD +GKSSL+ RF+ + +++ + + + + V+ T I + AG Sbjct: 7 ELRLGVLGDARSGKSSLIHRFLTGSYQVLEKT--ESEQYKKEMLVDGQTHLVLIREEAGA 64 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL---QAQGNPNMVMALAGNKSD 126 + A A I VF + ++ SF+ + +L + +G + +AL G + Sbjct: 65 PD-----AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDR 119 Query: 127 LLDARKVTAEDAQT---YAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 + + DA+ A + ET A NV +F E+A+++ ++ + Sbjct: 120 ISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQ 175 >4WNR-A nrPDB Length = 349 Score = 118 bits (296), Expect = 2e-27, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 78/192 (40%), Gaps = 12/192 (6%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 K++L+GD AGK+SL+ R + + F + T G D +K WD GQ Sbjct: 41 EVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQ 100 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD 129 E H+ + + I+V D E+A+ W++ +++ G + + +A NK D Sbjct: 101 EIMHATHQFFLSKRSLYILVLDSRRD---EKAEYWLKHIRSFGG-DSPVLVALNKIDENP 156 Query: 130 ARKVTAEDAQTYAQENGLF---FMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLP 186 + E + + QE F S K ++ ++ + L +V+ + Sbjct: 157 ----SFELNRKFLQEKYPSIKGFFRISCKEDRGIEGFSQKLKKELLKVEHMQIEWAKSWF 212 Query: 187 DRAMDRAVSSSC 198 + + SC Sbjct: 213 EVKT-KLEKMSC 223 >1MOZ-A nrPDB Length = 183 Score = 113 bits (282), Expect = 7e-26, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 9/170 (5%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 ++++LG GAGK++++ R + V + TIG F +TL+ +K +WD GQ Sbjct: 18 ELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG--FNVETLSY--KNLKLNVWDLGGQ 72 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQ-ELQAQGNPNMVMALAGNKSDLL 128 YY AA I V D T++ A K + LQ + + + + NK D Sbjct: 73 TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQP 132 Query: 129 ---DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 A +V+ E ++ + +SA + E + + Q Sbjct: 133 GALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEEQ 182 >5EE5-B nrPDB Length = 171 Score = 111 bits (279), Expect = 2e-25, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 11/173 (6%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 + ++++LG GAGK++++ R + V TIG F +T+ +KF++WD Sbjct: 5 TREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTY--KNLKFQVWDLG 59 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSD 126 G YY A I V D ++ +K + V L+ + ++ + NK D Sbjct: 60 GLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQD 119 Query: 127 LLDARKVTAEDAQTYA----QENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 + A ++E A + ++ +TSA T + E + L Q Sbjct: 120 MEQAMT-SSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 171 >3IHW-A nrPDB Length = 184 Score = 110 bits (276), Expect = 4e-25, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 76/172 (44%), Gaps = 11/172 (6%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 K+ ++G++ +GKS+LV R++ +V+ + G F + + V+ + I D G Sbjct: 20 ELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGR--FKKEIVVDGQSYLLLIRDEGGP 77 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN-MVMALAGNK--SD 126 + A + VF + ++ SF+ + L + N + + M L G + Sbjct: 78 PEL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAIS 132 Query: 127 LLDARKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 + R + A+ + + + ET A NV+ +F ++A+++ ++ Sbjct: 133 AANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRKK 184 >3D6T-B nrPDB Length = 171 Score = 110 bits (275), Expect = 4e-25, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 69/130 (53%), Gaps = 7/130 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEF--QESTIGAAFFSQTLAVNDATVK---FEIWDT 66 KL+++G+ G+GK++L+ + +K + + Q +T+G + + D + +WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTN-QASFERAKKWVQELQAQGNPNMVMALAGNKS 125 AG+E ++S P + A + V+D++ QA + K W+ ++A+ + + + L G Sbjct: 62 AGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSS-PVILVGTHL 120 Query: 126 DLLDARKVTA 135 D+ D ++ A Sbjct: 121 DVSDEKQRKA 130 >2H16-A nrPDB Length = 183 Score = 108 bits (270), Expect = 2e-24, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 72/167 (43%), Gaps = 13/167 (7%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G AGK++++ +F ++ V TIG+ + + +N+ +F +WD GQE Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNV--EEIVINNT--RFLMWDIGGQES 78 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDA 130 S YY I+V D T++ ++ + ++ A + + + NK D+ + Sbjct: 79 LRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKEC 138 Query: 131 RKVTAEDAQTY-----AQENGLFFMETSAKTATNVKEIFYEIARRLP 172 V + + +++ A T + + + RL Sbjct: 139 MTVA--EISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 183 >1YZG-A nrPDB Length = 179 Score = 108 bits (270), Expect = 2e-24, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 66/164 (40%), Gaps = 9/164 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K++++G AGK++++ +F+ ++ V TIG+ + F +WD GQE Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV----KNTHFLMWDIGGQES 72 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDA 130 S YY I+V D ++ K+ + + A + + + NK D+ Sbjct: 73 LRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGC 132 Query: 131 R---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 +++ + +++ A T + + + R+ Sbjct: 133 MTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176 >4ZI3-A nrPDB Length = 190 Score = 103 bits (258), Expect = 5e-23, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 9/178 (5%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 +++LLG AGK++L+ + + T G F +++ K +W Sbjct: 12 SAPDQEVRILLLGLDNAGKTTLLKQLASEDISHIT-PTQG--FNIKSVQSQG--FKLNVW 66 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN-MVMALAGN 123 D GQ + Y+ I V D ++ FE + + EL + + + + + N Sbjct: 67 DIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFAN 126 Query: 124 KSDL---LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTE 178 K DL A ++ ++ SA T V++ + + + + E Sbjct: 127 KQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKKLE 184 >1KSG-A nrPDB Length = 186 Score = 99.5 bits (247), Expect = 8e-22, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 9/178 (5%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 K +L++LG AGK++++ +F + V+ T+G F +TL K IWD Sbjct: 14 QKERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLG--FNIKTLEHRG--FKLNIWD 68 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNK 124 GQ+ S Y+ I V D ++ + ++ +Q L + + + NK Sbjct: 69 VGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANK 128 Query: 125 SDLL---DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 DL + + + SA T ++ + + T + Sbjct: 129 QDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRVFTAD 186 >3BH6-A nrPDB Length = 164 Score = 98.0 bits (243), Expect = 2e-21, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 9/166 (5%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 +++LLG AGK++L+ + + T G F +++ K +WD G Sbjct: 4 EVRILLLGLDNAGKTTLLKQLASEDISHIT-PTQG--FNIKSVQSQG--FKLNVWDIGGL 58 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN-MVMALAGNKSDL- 127 + Y+ I V D ++ FE + + EL + + + + + NK DL Sbjct: 59 RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLL 118 Query: 128 --LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 A ++ ++ SA T V++ + + + Sbjct: 119 TAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 164 >2X77-A nrPDB Length = 189 Score = 98.0 bits (243), Expect = 2e-21, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 9/170 (5%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 ++++LG AGK+S++ R V + + FE+WD Sbjct: 20 DRKIRVLMLGLDNAGKTSILYRLHLGDVVTTVP-----TVGVNLETLQYKNISFEVWDLG 74 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSD 126 GQ Y+ A I V D T++ AK + L ++ + NK D Sbjct: 75 GQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQD 134 Query: 127 LLD---ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 L D ++ + + +++S+KT + E + RL Sbjct: 135 LPDAASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLRE 184 >5DE3-A nrPDB Length = 169 Score = 95.3 bits (236), Expect = 2e-20, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 71/165 (43%), Gaps = 9/165 (5%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 ++++LG AGK++++ ++ + T G F ++L+ + +IWD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEED-ITTITPTQG--FNIKSLSRDG--FNLKIWDIGGQKS 56 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDL--- 127 Y+ A I V D + ++ + E LQ + + + + NK DL Sbjct: 57 IRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDLVGA 116 Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 L A ++ + T ++ SAK T +KE + +++ Sbjct: 117 LAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKEGMEWMMKQVK 161 >6HLU-A nrPDB Length = 974 Score = 94.1 bits (233), Expect = 3e-20, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 12/162 (7%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQT------LAVND--ATVKF 61 K+ L+GD AGK+SL+ + + + F + T G ++ L +D F Sbjct: 480 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 539 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 WD GQE H+ + ++ +++ D + S W++ ++ G + + + Sbjct: 540 HFWDFGGQEIMHASHQFFMTRSSVYMLLLD-SRTDS--NKHYWLRHIEKYGGKS-PVIVV 595 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEI 163 NK D + + + F S K V+ I Sbjct: 596 MNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESI 637 >3DPU-A nrPDB Length = 535 Score = 94.1 bits (233), Expect = 3e-20, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 12/162 (7%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQT------LAVND--ATVKF 61 K+ L+GD AGK+SL+ + + + F + T G ++ L +D F Sbjct: 41 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 100 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 WD GQE H+ + ++ +++ D + S W++ ++ G + + + Sbjct: 101 HFWDFGGQEIMHASHQFFMTRSSVYMLLLD-SRTDS--NKHYWLRHIEKYGGKS-PVIVV 156 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEI 163 NK D + + + F S K V+ I Sbjct: 157 MNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESI 198 >4V0N-A nrPDB Length = 169 Score = 88.0 bits (217), Expect = 2e-18, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 9/172 (5%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFV-KDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 G S ++++G +GK++++ R + + T+G V + F + Sbjct: 1 GAASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDE----VEKGPLTFTV 56 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAG 122 +D +G RY +L YYR A A + V D ++ A+ ++ + N + + Sbjct: 57 FDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFA 116 Query: 123 NKSDLLDAR---KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 NK DL A ++ ++ + ++ T V + +A RL Sbjct: 117 NKKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERL 168 >2H57-A nrPDB Length = 190 Score = 84.1 bits (207), Expect = 3e-17, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 78/182 (42%), Gaps = 13/182 (7%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFV-KDQFVEFQESTIGAAFFSQTLAVNDATV 59 + G+K ++ ++ LG +GK++++ + + + TIG F + +++ Sbjct: 14 LVPRGSKEVH--VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIG--FSIEKF--KSSSL 67 Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ---GNPNM 116 F ++D +GQ RY +L YY+ A I V D +++ AK+ + L + + Sbjct: 68 SFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRI 127 Query: 117 VMALAGNKSDLLD---ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 173 + NK DL D + KV+ ++ + A ++E + ++ Sbjct: 128 PILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQIQT 187 Query: 174 VQ 175 V+ Sbjct: 188 VK 189 >5DI3-B nrPDB Length = 263 Score = 76.0 bits (186), Expect = 9e-15, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 24/198 (12%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + LLG AGK++L+ ++ + T G + +N+ K E++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN----STTLNEGKYKIEVFDLGGGKNI 61 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLL--- 128 + Y A + V D + FE +K + E L+ Q + + + NK DL Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPTAA 121 Query: 129 DARKVTAEDAQTYAQENGLFFMETSAK----------TATNVKEIFYEIARRL----PRV 174 A +V + N +AK +K + + R PRV Sbjct: 122 PAAEVVKGLGLATCR-NSHNVFPCTAKMPAGQDVDHRLRDGLKWLVGTVDREFGRLDPRV 180 Query: 175 QPTENPTGMVLPDRAMDR 192 Q + +R Sbjct: 181 QTEAEEVRQEEARKKKER 198 >4M9Q-A nrPDB Length = 227 Score = 76.0 bits (186), Expect = 1e-14, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 24/198 (12%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + LLG AGK++L+ ++ + T G + +N+ K E++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN----STTLNEGKYKIEVFDLGGGKNI 61 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALAGNKSDLL--- 128 + Y A + V D + FE +K + E L+ Q + + + NK DL Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPTAA 121 Query: 129 DARKVTAEDAQTYAQENGLFFMETSAK----------TATNVKEIFYEIARRL----PRV 174 A +V + N +AK +K + + R PRV Sbjct: 122 PAAEVVKGLGLATCR-NSHNVFPCTAKMPAGQDVDHRLRDGLKWLVGTVDREFGRLDPRV 180 Query: 175 QPTENPTGMVLPDRAMDR 192 Q + +R Sbjct: 181 QTEAEEVRQEEARKKKER 198 >1M2O-B nrPDB Length = 190 Score = 75.6 bits (185), Expect = 1e-14, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 69/184 (37%), Gaps = 20/184 (10%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 +A+ G + + KL+ LG AGK++L+ D+ +T+ + + + +K Sbjct: 14 LASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIK 68 Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMA 119 F +D G + L Y+ + + D + F+ A+ + L ++ Sbjct: 69 FTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFV 128 Query: 120 LAGNKSDLLDARKVTAED---AQTYAQENGLFFME---------TSAKTATNVKEIFYEI 167 + GNK D +A V+ + A G +E S E F + Sbjct: 129 ILGNKIDAPNA--VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWL 186 Query: 168 ARRL 171 ++ + Sbjct: 187 SQYI 190 >6GNI-B nrPDB Length = 167 Score = 73.7 bits (180), Expect = 5e-14, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 20/171 (11%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 KL+ LG AGK++L+ D+ +T+ + + + +KF +D G + Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 57 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDA 130 L Y+ + + D + F+ A+ + L ++ + GNK D +A Sbjct: 58 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 117 Query: 131 RKVTAED---AQTYAQENGLFFME---------TSAKTATNVKEIFYEIAR 169 V+ + A G +E S E F +++ Sbjct: 118 --VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 166 >2GAO-A nrPDB Length = 208 Score = 72.9 bits (178), Expect = 8e-14, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 66/183 (36%), Gaps = 21/183 (11%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G + KLV LG AGK++L+ D+ + T+ S+ L + T F + Sbjct: 30 GLYKKSGKLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTLHPT--SEELTIAGMT--FTTF 84 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D G E+ + Y + + D + + +K + L N+ + + GN Sbjct: 85 DLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGN 144 Query: 124 KSDLLDA------RKV------TAEDAQTYAQENGLFFME---TSAKTATNVKEIFYEIA 168 K D DA R++ T +E ME S E F ++ Sbjct: 145 KIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 204 Query: 169 RRL 171 + + Sbjct: 205 QYI 207 >4BAS-A nrPDB Length = 199 Score = 72.2 bits (176), Expect = 1e-13, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 17/193 (8%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQES-TIGAAFFSQTLAVNDATVKFE 62 G ++V+ G +GK++++ + Q + T+G V F Sbjct: 11 MGQSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYNVE----TFEKGRVAFT 66 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ--------GNP 114 ++D G +++ L YY A I V D ++ K +Q + G Sbjct: 67 VFDMGGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGG 126 Query: 115 NMVMALAGNKSDLLDARK----VTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARR 170 + NK D A+ V D T ++ ++ T V E F + Sbjct: 127 RVPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHEGFSWLQET 186 Query: 171 LPRVQPTENPTGM 183 R Sbjct: 187 ASRQSGKAGTKRG 199 >1F6B-A nrPDB Length = 198 Score = 70.6 bits (172), Expect = 4e-13, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 64/183 (34%), Gaps = 21/183 (11%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G KLV LG AGK++L+ D+ + T+ S+ L + T F + Sbjct: 20 GLYKKTGKLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTLHPT--SEELTIAGMT--FTTF 74 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN-PNMVMALAGN 123 D G + + Y + + D + +K+ + L N+ + + GN Sbjct: 75 DLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGN 134 Query: 124 KSDLLDA------RKV------TAEDAQTYAQENGLFFME---TSAKTATNVKEIFYEIA 168 K D +A R++ T +E +E S E F +A Sbjct: 135 KIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMA 194 Query: 169 RRL 171 + + Sbjct: 195 QYI 197 >4C0K-A nrPDB Length = 423 Score = 67.2 bits (163), Expect = 5e-12, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 13/153 (8%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTL------AV 54 +A + K ++G G+GK+ + F+ VE IG F + + V Sbjct: 237 LAKRQSSRSVYKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCINSVQV 292 Query: 55 NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP 114 + D + L P A +V+D +N SFE + ++ Sbjct: 293 YGQEKHLILRDIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIY--IKYYAES 349 Query: 115 NMVMALAGNKSDLLDARKVTAEDAQTYAQENGL 147 + + + G K D+ + R+ + + L Sbjct: 350 KIPVMIVGTKCDMDERRQDYLMQPSEFCDKYKL 382 >6CES-A nrPDB Length = 313 Score = 66.4 bits (161), Expect = 8e-12, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 19/164 (11%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQE---STIGAAFFSQTLAVNDATVKFE 62 N ++ K++L+G G+GK+S+ + +TI + Sbjct: 3 NTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL---GNLVLN 59 Query: 63 IWDTAGQERY-----HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA--QGNPN 115 +WD GQ+ + S +R I VFDV ++ + + L+A Q +P+ Sbjct: 60 LWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPD 119 Query: 116 MVMALAGNKSDLLDARKVT------AEDAQTYAQENGLFFMETS 153 + +K DL+ + ED + ++ TS Sbjct: 120 AKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTS 163 >6IAE-A nrPDB Length = 223 Score = 63.7 bits (154), Expect = 5e-11, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 71/224 (31%), Gaps = 46/224 (20%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRF--VKDQFVEFQESTIGAAFFSQTLAVND--- 56 AA K+++LG +GKS++ +D + T +A++D Sbjct: 1 GAASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRR 60 Query: 57 --------ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL 108 ++WD G ++ + P A I VF+ + S + W + Sbjct: 61 SGRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKN- 119 Query: 109 QAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQEN----------------------G 146 AL ++ D + K+ D + + G Sbjct: 120 ---------FALNQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQG 170 Query: 147 LFFMETSAKTA-TNVKEIFYEIARRLPRVQPTENPTGMVLPDRA 189 + +ETS N KE F + ++ + ++ +R Sbjct: 171 IRALETSLDYQSDNFKEAFDALVEQIIASRLAAEENDLLQKERE 214 >3T1O-A nrPDB Length = 198 Score = 62.9 bits (152), Expect = 8e-11, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 19/181 (10%) Query: 6 NKSINAKLVLLGDVGAGKSS-LVLRFVK------DQFVE---FQESTIGAAFFSQTL-AV 54 N+ IN K+V G +GK++ L + K + V E T+ F + V Sbjct: 10 NREINFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEV 69 Query: 55 NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTN---QASFERAKKWVQELQAQ 111 +F ++ GQ Y++ + RG + V D +A+ E + + L Sbjct: 70 KGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAEY 129 Query: 112 G--NPNMVMALAGNKSDLLDARKVTAEDAQTYAQ-ENGLFFMETSAKTATNVKEIFYEIA 168 G ++ + + NK DL DA V E + E +E A V E E++ Sbjct: 130 GLTLDDVPIVIQVNKRDLPDALPV--EMVRAVVDPEGKFPVLEAVATEGKGVFETLKEVS 187 Query: 169 R 169 R Sbjct: 188 R 188 >6GDG-D nrPDB Length = 248 Score = 62.5 bits (151), Expect = 1e-10, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 4/122 (3%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 +L+LLG +GKS++V + F ++ V+ V F ++D GQ Sbjct: 37 RLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETK-FQVD--KVNFHMFDVGGQRD 93 Query: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDA 130 + A I V D ++ + A + + + + + L NK DLL Sbjct: 94 ERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAE 153 Query: 131 RK 132 + Sbjct: 154 KV 155 >5YMX-A nrPDB Length = 203 Score = 62.2 bits (150), Expect = 1e-10, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 22/183 (12%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQ-----------FVEFQESTIGAAFFSQTL- 52 ++ IN K+V G GK++ + +++ ++ + T+ F +L Sbjct: 7 SSREINCKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLG 65 Query: 53 AVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDV------TNQASFERAKKWVQ 106 + +F ++ GQ Y + + +G + V D N S E + + Sbjct: 66 EIRGFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRINLA 125 Query: 107 ELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYE 166 E Q + + NK DL +A VT E+ + + + A T V + Sbjct: 126 E-QGYDLNKIPYVIQYNKRDLPNA--VTVEEMRKALNHRNIPEYQAVAPTGVGVFDTLKA 182 Query: 167 IAR 169 +A+ Sbjct: 183 VAK 185 >2GJ9-A nrPDB Length = 172 Score = 59.8 bits (144), Expect = 8e-10, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 21/166 (12%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQ--FVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 K+V+ G AGKSSL+ + V T + + ++ I DTAG Sbjct: 6 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTT-RDVLREHIHIDGMP--LHIIDTAGL 62 Query: 70 -------ERYHSLAP-MYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 ER A + + D T + + A+ W E A+ + + + Sbjct: 63 REASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIW-PEFIARLPAKLPITVV 121 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167 NK+D+ + ++ NG + SA+T V + + Sbjct: 122 RNKADI-------TGETLGMSEVNGHALIRLSARTGEGVDVLRNHL 160 >6G79-A nrPDB Length = 225 Score = 56.8 bits (136), Expect = 6e-09, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 29/184 (15%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + KL+LLG +GKS++V + + + G + F ++D GQ Sbjct: 30 DVKLLLLGADNSGKSTIVKQM---KIIHGGSGGSGGTTGIVETHFTFKNLHFRLFDVGGQ 86 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL-QAQGNPNMVMALAGNKSDLL 128 + A I D+++ + + + + + L NK DL Sbjct: 87 RSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLF 146 Query: 129 DAR---------------KVTAEDAQTYAQ----------ENGLFFMETSAKTATNVKEI 163 + T EDA Y Q ++ T A N + I Sbjct: 147 GEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNAQVI 206 Query: 164 FYEI 167 F + Sbjct: 207 FDAV 210 >2E87-A nrPDB Length = 357 Score = 56.8 bits (136), Expect = 7e-09, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 71/195 (36%), Gaps = 27/195 (13%) Query: 13 LVLLGDVGAGKSSLVLRFVKD--QFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ- 69 +V+ G GKS+L+ + + +T G D +++I DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVG----QFEDGYFRYQIIDTPGLL 225 Query: 70 ----------ERYHSLAPMYYRGAAAAIIVFDVTNQASF--ERAKKWVQELQAQGNPNMV 117 E+ LA Y I +FD + F E +E+ + ++ Sbjct: 226 DRPISERNEIEKQAILALRYL--GNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFK-DLP 282 Query: 118 MALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPT 177 + NK D+ D + + + +E GL ++ SA T + + EI + ++P Sbjct: 283 FLVVINKIDVADEENIKRLE--KFVKEKGLNPIKISALKGTGIDLVKEEI---IKTLRPL 337 Query: 178 ENPTGMVLPDRAMDR 192 +R + R Sbjct: 338 AEKVAREKIERELRR 352 >5J8B-z nrPDB Length = 679 Score = 56.4 bits (135), Expect = 7e-09, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 63/183 (34%), Gaps = 31/183 (16%) Query: 22 GKSSLVLRFV-------KDQFVEFQESTIGAAFFSQTLAV------------NDATVKFE 62 GKS+L R + + E ++ + + + + F Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELE-RERGITIKASAVRVTYRAKDGEEYVFH 148 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 + DT G + ++V D + E K+ L+ G+ + + Sbjct: 149 LIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALE-HGHVIIPVI--- 204 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMET---SAKTATNVKEIFYEIARRLPRVQPTEN 179 NK DL +AR E A + GL E S KT V+EI I +R+P P + Sbjct: 205 NKIDLPNAR--PLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEAIVQRIP--PPKGD 260 Query: 180 PTG 182 P Sbjct: 261 PEA 263 >5IMR-C nrPDB Length = 610 Score = 56.4 bits (135), Expect = 7e-09, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 63/183 (34%), Gaps = 31/183 (16%) Query: 22 GKSSLVLRFV-------KDQFVEFQESTIGAAFFSQTLAV------------NDATVKFE 62 GKS+L R + + E ++ + + + + F Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELE-RERGITIKASAVRVTYRAKDGEEYVFH 79 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 + DT G + ++V D + E K+ L+ G+ + + Sbjct: 80 LIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALE-HGHVIIPVI--- 135 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMET---SAKTATNVKEIFYEIARRLPRVQPTEN 179 NK DL +AR E A + GL E S KT V+EI I +R+P P + Sbjct: 136 NKIDLPNAR--PLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEAIVQRIP--PPKGD 191 Query: 180 PTG 182 P Sbjct: 192 PEA 194 >4ARZ-A nrPDB Length = 310 Score = 55.6 bits (133), Expect = 1e-08, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 20/156 (12%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKD--QFVE-FQESTIGAAFFSQTLAVNDATVKFEIWDT 66 KL+L+G G+GKSS+ + F +TI + +WD Sbjct: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFL---GNMTLNLWDC 62 Query: 67 AGQE-----RYHSLAPMYYRGAAAAIIVFDVTNQASFERAK---KWVQELQAQGNPNMVM 118 GQ+ + ++ I VFDV + + + K +++L+ +P+ + Sbjct: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY-SPDAKI 121 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSA 154 + +K DL+ ++ + L ETS+ Sbjct: 122 FVLLHKMDLV---QLDKREELFQIMMKNLS--ETSS 152 >2LKD-A nrPDB Length = 178 Score = 52.9 bits (126), Expect = 8e-08, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 12/174 (6%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + ++G V GK++L+ + E + I + + VND + F DT G E + Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF--LDTPGHEAF 68 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLD--- 129 ++ + I+V + + V+ + N+ + +A NK D + Sbjct: 69 TTMRARGAQVTDIVILVVAADD----GVMPQTVEAINHAKAANVPIIVAINKMDKPEANP 124 Query: 130 ARKVTAEDAQTYA-QENG--LFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 R + +E G F + SAKT + + I + NP Sbjct: 125 DRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMILLVSEMEELKANP 178 >3CB4-D nrPDB Length = 599 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 57/172 (33%), Gaps = 29/172 (16%) Query: 22 GKSSL---VLRFVKDQFVEFQESTI----------GAAFFSQTLAVN-----DATVKFEI 63 GKS+L +++ E+ + G +Q++ ++ T + Sbjct: 16 GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDV---TNQASFERAKKWVQELQAQGNPNMVMAL 120 DT G + A++V D + ++ ++ + Sbjct: 76 IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEM-------DLEVVP 128 Query: 121 AGNKSDLLD-ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 NK DL + AE+ + + + SAKT V+++ + R + Sbjct: 129 VLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDI 180 >3GEH-A nrPDB Length = 462 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 30/162 (18%) Query: 11 AKLVLLGDVGAGKSSLVLRFVK-DQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG- 68 K+ ++G GKSSL+ + + D+ + L V V ++ DTAG Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPV--QVLDTAGI 282 Query: 69 -----Q-ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWV---QELQAQGNPNMVMA 119 Q E+ A +++ + + A W QE+ Q + Sbjct: 283 RETSDQVEKIGVERSRQAANTADLVLL-------TIDAATGWTTGDQEIYEQVKHR-PLI 334 Query: 120 LAGNKSDLLDARKVTAED---------AQTYAQENGLFFMET 152 L NK DL++ + +T+ + AQ+ G+ +ET Sbjct: 335 LVMNKIDLVEKQLITSLEYPENITQIVHTAAAQKQGIDSLET 376 >5KUT-A nrPDB Length = 189 Score = 52.1 bits (124), Expect = 1e-07, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 7/147 (4%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 + K+ +G G GKS+ + F+ + T+ VN Sbjct: 3 GQTQRSVLLCKV--VGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTVQVNGQEKYL 60 Query: 62 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 + + LA A ++FD ++ SF + + Sbjct: 61 ILCEVG---TDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYK--HHYMDGQTPCLFV 115 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLF 148 +K+DL + V+ + +++ L Sbjct: 116 SSKADLPEGVAVSGPSPAEFCRKHRLP 142 >3K53-A nrPDB Length = 271 Score = 51.8 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 13/174 (7%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + L+G+ GK+++ + G + + +F + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWP--GVTVEKKEGIMEYREKEFLVVDLPGIYSL 63 Query: 73 HS------LAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 + +A + A +IV D+ + + L+ + L NK D Sbjct: 64 TAHSIDELIARNFILDGNADVIV-DIVDSTCL--MRNLFLTLELFEMEVKNIILVLNKFD 120 Query: 127 LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 LL + + + +E G+ + T+AK V+E+ + + + T NP Sbjct: 121 LLKKKGAKID-IKKMRKELGVPVIPTNAKKGEGVEEL-KRMIALMAEGKVTTNP 172 >3LLU-A nrPDB Length = 196 Score = 51.0 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 73/193 (37%), Gaps = 29/193 (15%) Query: 3 AAGNKSINA-----KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN-- 55 ++G +++ +++L+G +GKSS+ T+ ++ + Sbjct: 8 SSGRENLYFQGSKPRILLMGLRRSGKSSIQKVVFHK---MSPNETLFLESTNKIYKDDIS 64 Query: 56 -DATVKFEIWDTAGQERYHSLAPMY---YRGAAAAIIVFDVTNQASFERAKKWVQELQA- 110 + V F+IWD GQ + Y +RG A I V D + E + + Sbjct: 65 NSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKA 123 Query: 111 -QGNPNMVMALAGNKSD-------LLDARKVTAEDAQTYA----QENGLFFMETSAKTAT 158 + NP+M + +K D + R + A ++ L F TS Sbjct: 124 YKVNPDMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTS-IYDH 182 Query: 159 NVKEIFYEIARRL 171 ++ E F ++ ++L Sbjct: 183 SIFEAFSKVVQKL 195 >2DYK-A nrPDB Length = 161 Score = 50.6 bits (120), Expect = 4e-07, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 34/177 (19%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFS-QTLAVNDATVKFEIWDTAG-- 68 K+V++G GKSSL R +K + + + + V +F + DT G Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKR--SAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLW 60 Query: 69 ---------QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQE-LQAQGNPNMVM 118 QE+ A +++F V +A +A V E L+ +G + Sbjct: 61 SGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK---PV 111 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFF---METSAKTATNVKEIFYEIARRLP 172 L K D + GL F + TS++ A ++E+ I RLP Sbjct: 112 ILVATKVD-------DPKHELYLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERLP 161 >6CES-C nrPDB Length = 399 Score = 50.2 bits (119), Expect = 5e-07, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 25/202 (12%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN---DATVKFEIWDTAG 68 +++L+G +GK+S+ T+ ++ + + V F+IWD G Sbjct: 63 RILLMGLRRSGKNSIQKVVFHK---MSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 69 QERYHSLAPMY---YRGAAAAIIVFDVTNQASFERAKKWVQELQA--QGNPNMVMALAGN 123 Q + Y +RG A I V D + E + + + NP+M + + Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFIH 178 Query: 124 KSD-------LLDARKVTAEDAQTYA----QENGLFFMETSAKTATNVKEIFYEIARR-L 171 K D + R + A ++ L F TS ++ E F ++ ++ + Sbjct: 179 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTS-IYDHSIFEAFSKVVQKLI 237 Query: 172 PRVQPTENPTGMVLPDRAMDRA 193 P++ EN + + + +++A Sbjct: 238 PQLPTLENLLNIFISNSGIEKA 259 >1XZP-A nrPDB Length = 482 Score = 50.2 bits (119), Expect = 6e-07, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 70/171 (40%), Gaps = 23/171 (13%) Query: 11 AKLVLLGDVGAGKSSLVLRFV-KDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG- 68 ++V++G GKS+L+ R + +D+ + S+ + + + F I DTAG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGV 301 Query: 69 -------QERYHSLAPMY-YRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 ER + A + V D ++ E +K ++ ++ + + Sbjct: 302 RSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLD-EEDRKILERIKNKRY-----LV 355 Query: 121 AGNKSDLLDARKVTAEDAQ-TYAQENGLFFMETSAKTATNVKEIFYEIARR 170 NK D+++ K+ E+ + + + ++ SA ++++ I R Sbjct: 356 VINKVDVVE--KINEEEIKNKLGTDRHM--VKISALKGEGLEKLEESIYRE 402 >1MKY-A nrPDB Length = 439 Score = 49.8 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 26/176 (14%) Query: 11 AKLVLLGDVGAGKSSLVL-RFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 K+ ++G GKS+L K++ + + ++ F DTAG Sbjct: 181 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF--VDTAGL 238 Query: 70 ERYHSLAPM------------YYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMV 117 R + P A +IV D T + + ++ ++ +G ++V Sbjct: 239 RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQD-QRMAGLMERRGRASVV 297 Query: 118 MALAGNKSDLLDARKVTAEDAQTYAQENGLFFME------TSAKTATNVKEIFYEI 167 + NK DL+ R+ ++ +E L+F++ TSA N+ + + Sbjct: 298 VF---NKWDLVVHREKRYDEFTKLFREK-LYFIDYSPLIFTSADKGWNIDRMIDAM 349 Score = 47.5 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 36/181 (19%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQEST-IGAAFFSQTLAVNDATVKFEIWDTAG--- 68 ++++G GKS+L + VK + ++ + T+ T K DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKL--VDTCGVFD 61 Query: 69 ------QERYHSLAPMYYRGAAAAIIVFD----VTNQASFERAKKWVQELQAQGNPNMVM 118 ++ + R A + V D +T + E ++++ + Sbjct: 62 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK------STVDT 113 Query: 119 ALAGNKSD-LLD-ARKVTAEDAQTYAQENGLFFME---TSAKTATNVKEIFYEIARRLPR 173 L NK++ L + R+V E L F E SA+ N+ + I ++L Sbjct: 114 ILVANKAENLREFEREVKPEL-------YSLGFGEPIPVSAEHNINLDTMLETIIKKLEE 166 Query: 174 V 174 Sbjct: 167 K 167 >6D4G-A nrPDB Length = 271 Score = 49.4 bits (117), Expect = 9e-07, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 6/96 (6%) Query: 84 AAAIIVFDVTN--QASFERAKKWVQELQAQ-GNPNMVMALAGNKSDLLDARKVTAEDAQT 140 ++ DV+ +F+ K+V L Q + + K D R + DA T Sbjct: 163 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVIVLTKCDEGVERYI--RDAHT 220 Query: 141 YA-QENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 +A + L +ETSA++ NV F + + + + + Sbjct: 221 FALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSR 256 >5DN8-A nrPDB Length = 446 Score = 49.4 bits (117), Expect = 9e-07, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 75/208 (36%), Gaps = 40/208 (19%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQES--TIGAAFFSQTLAVNDATVKFEIWDTAG 68 K+ ++G GKS+L+ R + ++ V + T + + A ND DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYI-PFARNDENYTLI--DTAG 235 Query: 69 -------Q---ERYHSLAP-MYYRGAAAAIIVFD----VTNQASFERAKKWVQELQAQGN 113 Q E++ + A I + D VT Q ++ L Sbjct: 236 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQD--------LRLLNRIVE 287 Query: 114 PNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFF------METSAKTATNVKEIFYEI 167 + + +A NK D L+ + D A + + F SA T V ++F I Sbjct: 288 AGVSLIIAVNKWDGLN---IEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAI 344 Query: 168 ARRLPRVQPTENPTGMVLPDRAMDRAVS 195 Q + RA+++AV+ Sbjct: 345 QE---SYQSIQQELTTGQLTRALEKAVA 369 Score = 35.6 bits (81), Expect = 0.014, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 70/196 (35%), Gaps = 22/196 (11%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQ---TLAVNDATVKFEIWDTAGQ 69 + ++G GKS+L K + + + + ++ + + DT G Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSR--AALVADVPGVTRDRQYGETTIDSQ--RLLLVDTGGL 63 Query: 70 --ERYHSLAPMYYRGAAAAI-----IVFDVTNQASFERAKKWVQE-LQAQGNPNMVMALA 121 +AP+ AI I+F V +A A + + E L+ +G + LA Sbjct: 64 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPADEIIAERLRKKGKK---IFLA 120 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPT 181 NK+D A V + Y G ++ +A + VK++ ++ LP + Sbjct: 121 VNKADRARAAVV---QSDFYKLGFGEPYV-IAAASGRGVKDLMTQVLENLPEEKEVIEKE 176 Query: 182 GMVLPDRAMDRAVSSS 197 + V S Sbjct: 177 VGIKIAMIGRPNVGKS 192 >2Q3F-A nrPDB Length = 181 Score = 49.4 bits (117), Expect = 9e-07, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 24/183 (13%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN---DATVKFEIW 64 + +++L+G +GKSS+ T+ ++ + + V F+IW Sbjct: 2 EVKPRILLMGLRRSGKSSIQKVVFHK---MSPNETLFLESTNKICREDVSNSSFVNFQIW 58 Query: 65 DTAGQERYHSLAPMY---YRGAAAAIIVFDVTNQASFERAKKWVQELQA--QGNPNMVMA 119 D GQ + Y +RG A I V D + E + + + N ++ Sbjct: 59 DFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQD-DYMEALARLHLTVTRAYKVNTDINFE 117 Query: 120 LAGNKSD-------LLDARKVTAEDAQTYA----QENGLFFMETSAKTATNVKEIFYEIA 168 + +K D + R + A ++ L F TS ++ E F ++ Sbjct: 118 VFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTS-IYDHSIFEAFSKVV 176 Query: 169 RRL 171 ++L Sbjct: 177 QKL 179 >3C5H-A nrPDB Length = 255 Score = 49.4 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 6/94 (6%) Query: 84 AAAIIVFDVTN--QASFERAKKWVQELQAQ-GNPNMVMALAGNKSDLLDARKVTAEDAQT 140 ++ DV+ +F+ K+V L Q + + K D R + DA T Sbjct: 164 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYI--RDAHT 221 Query: 141 YA-QENGLFFMETSAKTATNVKEIFYEIARRLPR 173 +A + L +ETSA++ NV F + + + + Sbjct: 222 FALSKKNLQVVETSARSNVNVDLAFSTLVQLIDK 255 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Query: 17 GDVGAGKSSLVLRFVK---DQFVEFQESTIGA-AFFSQTLAVND 56 G G GKS L RFV+ D+F S + F + + + Sbjct: 35 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNNDH 78 >3GEE-A nrPDB Length = 476 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 16/193 (8%) Query: 14 VLLGDVGAGKSSLVLRFV-KDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ--- 69 V+ G AGKS+L+ + +++ + + + + + DTAG Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKTMFRLT--DTAGLREA 294 Query: 70 -ERY--HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA--QGNPNMVMALAGNK 124 E + + A A +I++ + + + ER + E++ +P NK Sbjct: 295 GEEIEHEGIRRSRMKMAEADLILY-LLDLGT-ERLDDELTEIRELKAAHPAAKFLTVANK 352 Query: 125 SDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMV 184 D + A G + SA + + + + + + +V Sbjct: 353 LDRAANAD---ALIRAIADGTGTEVIGISALNGDGIDTLKQHMGDLVKNLDKLHEASVLV 409 Query: 185 LPDRAMDRAVSSS 197 R + ++S Sbjct: 410 TSLRHYEALRNAS 422 >6GB2-BC nrPDB Length = 657 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 17/179 (9%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN---DATVKFEIWDTAGQ 69 + ++G V GK++L+ +F K Q T G V+ + F DT G Sbjct: 113 VTIMGHVDHGKTTLLDKFRKTQVAA--VETGGITQHIGAFLVSLPSGEKITF--LDTPGH 168 Query: 70 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD-LL 128 + ++ + ++V + K+ V+ +Q + + + LA NK D Sbjct: 169 AAFSAMRARGAQVTDIVVLVVAADD----GVMKQTVESIQHAKDAQVPIILAVNKCDKAE 224 Query: 129 DARKVTAEDAQTY---AQENG--LFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTG 182 + ++ Y ++ G + + SA T N+ + ++ +P G Sbjct: 225 ADPEKVKKELLAYDVVCEDYGGDVQAVPVSALTGDNLMALAEATVALAEMLELKADPNG 283 >3J8G-X nrPDB Length = 490 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 29/180 (16%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQES--TIGAAFFSQTLAVNDATVKFEIW 64 +S+ KL ++G GKS+L R + ++ V + T + + + + Sbjct: 199 QSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYI-PMERDGREYVLI-- 255 Query: 65 DTAG----------QERYHSLAP-MYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGN 113 DTAG E++ + A ++V D S + + + G Sbjct: 256 DTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS-LLGFILNSGR 314 Query: 114 PNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFME------TSAKTATNVKEIFYEI 167 +++ NK D L +V + +T + L F++ SA + V +F + Sbjct: 315 SLVIVV---NKWDGLSQ-EVKEQVKETL--DFRLGFIDFARVHFISALHGSGVGNLFESV 368 Score = 33.3 bits (75), Expect = 0.065, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 20/133 (15%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQ---FVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + L+G GKS+L R + + +F T + + + DT G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIE-GREFICI---DTGGI 60 Query: 70 E--------RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 + R + + A + + D + + L+++ P L Sbjct: 61 DGTEDGVETRMAEQSLLAIEEADVVLFMVD-ARAGLMPADEAIAKHLRSREKPTF---LV 116 Query: 122 GNKSD-LLDARKV 133 NK+D L + V Sbjct: 117 ANKTDGLDPDQAV 129 >5LAD-A nrPDB Length = 404 Score = 47.5 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 56/175 (32%), Gaps = 23/175 (13%) Query: 13 LVLLGDVGAGKSSLVLRFVKD--QFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE 70 +V+ G GKSS + V V T + V DT G + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69 Query: 71 RYHSL--------APMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 L ++YR A I+V D + +E++ + + Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTDSEPTPYEDDVVNLFKEME------IPFVVVV 122 Query: 123 NKSDLLDARKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIARRLPRVQP 176 NK D+L + AE+ + + + SA +I I+ LP + Sbjct: 123 NKIDVLGEK---AEELKGLYESRYEAKVLLVSALQKKGFDDIGKTISEILPGDEE 174 >5KU1-A nrPDB Length = 424 Score = 47.5 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 55/144 (38%), Gaps = 16/144 (11%) Query: 11 AKLVLLGDVGAGKS----SLVLRFV--KDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 + ++G GKS +L+ R + + + E +S + T+ V + Sbjct: 243 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSY----YAINTVYVYGQEKYLLLH 298 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 D + E + +V+DV+N SFE + ++ + + + K Sbjct: 299 DISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQ--HFMDSRIPCLIVAAK 352 Query: 125 SDLLDARKVTAEDAQTYAQENGLF 148 SDL + ++ + + +++ + Sbjct: 353 SDLHEVKQEYSISPTDFCRKHKMP 376 >2CXX-A nrPDB Length = 190 Score = 47.5 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 39/189 (20%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG---- 68 ++ G GKS+L+ R + + + + + + K I D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGV----TRKIIEIEWKNHK--IIDMPGFGFM 57 Query: 69 -------QERYHSLAPMYY----RGAAAAIIVFDVTNQASFERAKKWVQE----LQAQGN 113 QER + + A++V D +A+ E K+W + + + Sbjct: 58 MGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD--GKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 114 P-----NMVMALAGNKSD-LLDARKVTAEDAQTY---AQENGLFFMETSAKTATNVKEI- 163 ++ +A NK D + + ++V A+ + E F+ SAK N++ + Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLK 175 Query: 164 --FYEIARR 170 +E+ R Sbjct: 176 NRIFEVIRE 184 >5KSO-A nrPDB Length = 190 Score = 47.1 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 55/144 (38%), Gaps = 16/144 (11%) Query: 11 AKLVLLGDVGAGKS----SLVLRFV--KDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 + ++G GKS +L+ R + + + E +S + T+ V + Sbjct: 9 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSY----YAINTVYVYGQEKYLLLH 64 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 D + E + +V+DV+N SFE + ++ + + + K Sbjct: 65 DISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQ--HFMDSRIPCLIVAAK 118 Query: 125 SDLLDARKVTAEDAQTYAQENGLF 148 SDL + ++ + + +++ + Sbjct: 119 SDLHEVKQEYSISPTDFCRKHKMP 142 >5ZZM-A nrPDB Length = 426 Score = 46.8 bits (110), Expect = 6e-06, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 66/178 (37%), Gaps = 35/178 (19%) Query: 13 LVLLGDVGAGKSSLVLR------FVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 66 + L+G AGKS+L R + DQ + T+ +A TV DT Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL----RRIDVADVGETVLA---DT 252 Query: 67 AG--QERYHSLAPMY------YRGAAAAIIVFDVTN---QASFERAKKWVQELQAQGNPN 115 G + H L + R A + V D + Q + E ++E+ A Sbjct: 253 VGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH---E 309 Query: 116 MVMALAGNKSDLLDARK--VTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 + L NK D+L+ + + ++ + SA+T + ++F + RL Sbjct: 310 IPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL------SAQTGAGIPQLFQALTERL 361 >2YWH-A nrPDB Length = 600 Score = 46.4 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 25/171 (14%) Query: 22 GKSSLVLRFVK-------DQFVEFQESTIGAAFFSQTLAV------------NDATVKFE 62 GKS+L R ++ + E T+ + + V + T K Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVE-RERGITVKMQAVRMFYKAKDGNTYKLH 76 Query: 63 IWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 + DT G + A+++ D + + + + ++ ++V+ Sbjct: 77 LIDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFWKAVEQ----DLVIIPVI 132 Query: 123 NKSDLLDARK-VTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 NK DL A + + + + SAK ++EI I R+P Sbjct: 133 NKIDLPSADVDRVKKQIEEVLGLDPEEAILASAKEGIGIEEILEAIVNRIP 183 >3IZY-P nrPDB Length = 537 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 69/178 (38%), Gaps = 11/178 (6%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + ++G V GK++L+ + K Q + I + +++ K DT G + Sbjct: 7 VTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGE-KITFLDTPGHAAF 65 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD-LLDAR 131 ++ + I+V + K+ V+ +Q + ++ + LA NK D Sbjct: 66 SAMRARGTQVTDIVILVVAADD----GVMKQTVESIQHAKDAHVPIVLAINKCDKAEADP 121 Query: 132 KVTAEDAQTY---AQENG--LFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMV 184 + ++ Y ++ G + + SA T N+ + ++ +PTG V Sbjct: 122 EKVKKELLAYDVVCEDYGGDVQAVHVSALTGENMMALAEATIALAEMLELKADPTGAV 179 >1WF3-A nrPDB Length = 301 Score = 45.6 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 67/212 (31%), Gaps = 52/212 (24%) Query: 4 AGNKSINAKLVLLGDVGAGKSSLVLRFVKDQ---FVEFQEST------IGAAFFSQTLAV 54 K+ + + ++G GKS+L+ + + ++T I Q + V Sbjct: 1 MAEKTYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFV 60 Query: 55 NDATVKFEIWDTAG----QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA 110 + + + D G QE Y +LA A + V D+ + + E + V Sbjct: 61 DTPGLHKPM-DALGEFMDQEVYEALAD-----VNAVVWVVDLRHPPTPED--ELVARALK 112 Query: 111 QGNPNMVMALAGNKSDLL-------------------------DARKVTAEDAQTYAQEN 145 + + L GNK D D R+V A A Sbjct: 113 PLVGKVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMP 172 Query: 146 GLFFM--ETSAKTATNVKEIFYEIARRLPRVQ 175 F E AK+ + F E + R + Sbjct: 173 EGPFFYPEDYAKS----DQTFGEWVAEILREE 200 >4V7F-o nrPDB Length = 647 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 23/197 (11%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV---NDATVKFEIWDTAG- 68 L++ G GKSS + K + F +++L V + ++F+ DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKSDVDVQPYA-----FTTKSLYVGHFDYKYLRFQAIDTPGI 224 Query: 69 ----QERYHSLAPMY-YRGAA---AAIIVFDVTNQASF--ERAKKWVQELQAQGNPNMVM 118 E +++ Y A + D++ Q F E K ++ VM Sbjct: 225 LDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVM 284 Query: 119 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMET---SAKTATNVKEIFYEIARRLPRVQ 175 + NK+D++ + E AQ + +E S + NV E+ + +L + Sbjct: 285 VVI-NKTDIIRPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKACEKLLASR 343 Query: 176 PTENPTGMVLPDRAMDR 192 + +++ Sbjct: 344 IENKLKSQSRINNVLNK 360 >2GTP-A nrPDB Length = 323 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 51/181 (28%), Gaps = 44/181 (24%) Query: 37 EFQESTIGAAFFSQTLAVN-------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIV 89 T ++ + F+++D GQ + G A I Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193 Query: 90 FDVTNQASF----ERAKKWVQELQAQGN-------PNMVMALAGNKSDLLDAR------- 131 +++ E + + ++ + + + L NK DL + + Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLT 253 Query: 132 --------KVTAEDAQTYAQ-----------ENGLFFMETSAKTATNVKEIFYEIARRLP 172 T E+A Y Q ++ T A NV+ +F + + Sbjct: 254 ICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 313 Query: 173 R 173 + Sbjct: 314 K 314 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 10 NAKLVLLGDVGAGKSSLVLR 29 KL+LLG +GKS++V + Sbjct: 2 EVKLLLLGAGESGKSTIVKQ 21 >3IEU-A nrPDB Length = 301 Score = 44.4 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 65/203 (32%), Gaps = 32/203 (15%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW- 64 +KS + ++G GKS+L+ + + + + + ++ I+ Sbjct: 4 DKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRK--AQTTRHRIVGIHTEGAYQAIYV 61 Query: 65 DTAGQ--ERYHSL-------APMYYRGAAAAIIVFDVTNQASFERAKKWVQE----LQAQ 111 DT G E ++ A I V + T W + L Sbjct: 62 DTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTR---------WTPDDEMVLNKL 112 Query: 112 GNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEIFYEIARR 170 + LA NK D + + Q A + L + SA+T NV IA Sbjct: 113 REGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVD----TIAAI 168 Query: 171 LPRVQPTENPTGMVLPDRAMDRA 193 + + P T D DR+ Sbjct: 169 VRKHLPEA--THHFPEDYITDRS 189 >3R9W-A nrPDB Length = 307 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 60/205 (29%), Gaps = 43/205 (20%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI--WDTAGQ- 69 + ++G GKS+L+ + V G + L V + + +I DT G Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAGT-TRMRVLGVKNIPNEAQIIFLDTPGIY 69 Query: 70 ---------ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP-----N 115 +A A + + D T + W + N Sbjct: 70 EPKKSDVLGHSMVEIAKQSLEEADVILFMIDAT--------EGWRPRDEEIYQNFIKPLN 121 Query: 116 MVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFME------TSAKTATNVKEIFYEIAR 169 + + NK D + A++ E E SA N+ E + + Sbjct: 122 KPVIVVINKID----KIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDE----LVK 173 Query: 170 RLPRVQPTENPTGMVLPDRAMDRAV 194 + + P P + D D + Sbjct: 174 TILKYLPEGEP--LFPEDMITDLPL 196 >4KJZ-A nrPDB Length = 473 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 19/194 (9%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 +V++G V GK++L+ K + E + I + + TV F DT G E + Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 132 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG-NKSDLLDA- 130 ++ + A A+IV + +E A + NK DL A Sbjct: 133 TTIRQRGAKVADIAVIVIAADD-----GIMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 187 Query: 131 -RKVTAEDAQT--YAQENG--LFFMETSAKTATNVK---EIFYEIAR-RLPRVQPTENPT 181 KV + + +E G + SAKT V+ E+ +A R P P Sbjct: 188 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPR 247 Query: 182 GMVLPDRAMDRAVS 195 G++L +D+ Sbjct: 248 GVILES-KLDKQAG 260 >4B44-A nrPDB Length = 363 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 19/194 (9%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 +V++G V GK++L+ K + E + I + + TV F DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 133 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG-NKSDLLDA- 130 ++ + A A+IV + +E A + NK DL A Sbjct: 134 TTIRQRGAKVADIAVIVIAADD-----GIMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 188 Query: 131 -RKVTAEDAQT--YAQENG--LFFMETSAKTATNVK---EIFYEIAR-RLPRVQPTENPT 181 KV + + +E G + SAKT V+ E+ +A R P P Sbjct: 189 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPR 248 Query: 182 GMVLPDRAMDRAVS 195 G++L +D+ Sbjct: 249 GVILES-KLDKQAG 261 >4CSU-9 nrPDB Length = 390 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 7/103 (6%) Query: 91 DVTNQASFERAKKWVQELQAQGNPNM--VMALAGNKSDLLDARKVTAEDAQTYAQENGL- 147 D T+ E A+ + EL+ L NK DLLD + E A+ A+ G Sbjct: 251 DGTDP--VENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVE-AEEKAKAIAEALGWE 307 Query: 148 -FFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRA 189 + SA + VK++ +++ + + Sbjct: 308 DKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVE 350 >3V00-C nrPDB Length = 356 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 50/185 (27%), Gaps = 52/185 (28%) Query: 37 EFQESTIGAAFFSQTLAVND--------ATVKFEIWDTAGQERYHSLAPMYYRGAAAAII 88 T + + F ++D GQ + G A I Sbjct: 167 PGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIF 225 Query: 89 VFDVTNQASF----ERAKKWVQELQAQGN-------PNMVMALAGNKSDLLDAR------ 131 +++ E + + + + + + L NK DL + + Sbjct: 226 CVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKSPL 285 Query: 132 ---------KVTAEDAQTYAQENGLFFME--------------TSAKTATNVKEIFYEIA 168 T E+A Y + + F+E T A NVK +F + Sbjct: 286 TICYPEYAGSNTYEEAGNYIK---VQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVT 342 Query: 169 RRLPR 173 + + Sbjct: 343 DIIIK 347 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 8 SINAKLVLLGDVGAGKSSLVLR 29 + KL+LLG +GKS++V + Sbjct: 33 ARTVKLLLLGAGESGKSTIVKQ 54 >2QAG-A nrPDB Length = 361 Score = 43.3 bits (101), Expect = 8e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 9/83 (10%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLR-FVKDQFVEFQES--------TIGAAFFSQTLAVND 56 K L+++G+ G GKS+L+ F+ D + E T+ + + Sbjct: 33 KKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERG 92 Query: 57 ATVKFEIWDTAGQERYHSLAPMY 79 ++ + DT G + + Sbjct: 93 VKLRLTVVDTPGYGDAINCRDCF 115 >3FTQ-A nrPDB Length = 274 Score = 42.9 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 9/83 (10%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLR-FVKDQFVEFQES--------TIGAAFFSQTLAVND 56 K L+++G+ G GKS+L+ F+ D + E T+ + + Sbjct: 1 KKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERG 60 Query: 57 ATVKFEIWDTAGQERYHSLAPMY 79 ++ + DT G + + Sbjct: 61 VKLRLTVVDTPGYGDAINCRDCF 83 >3J4J-A nrPDB Length = 569 Score = 42.9 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 19/194 (9%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 +V++G V GK++L+ K + E + I + + TV F DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 133 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG-NKSDLLDA- 130 ++ + A A+IV + +E A + NK DL A Sbjct: 134 TTIRQRGAKVADIAVIVIAADD-----GIMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 188 Query: 131 -RKVTAEDAQT--YAQENG--LFFMETSAKTATNVK---EIFYEIAR-RLPRVQPTENPT 181 KV + + +E G + SAKT V+ E+ +A R P P Sbjct: 189 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPR 248 Query: 182 GMVLPDRAMDRAVS 195 G++L +D+ Sbjct: 249 GVILES-KLDKQAG 261 >5YT0-A nrPDB Length = 364 Score = 42.1 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 5 GNKSINAK---LVLLGDVGAGKSSLVLRF---------VKDQFVEFQESTIGAAFFSQTL 52 G+ + +V+LG V GK++L+ + S + A + Sbjct: 8 GDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIA 67 Query: 53 AVNDATVKFEIW-------DTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAK 102 + ++ DT G E + +L A AI+V D+ ++E Sbjct: 68 EPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL- 126 Query: 103 KWVQELQAQGNPNMVMALAGNKSD 126 + ++E + + +A NK D Sbjct: 127 ELLKERR------VPFLIAANKID 144 >5FG3-A nrPDB Length = 623 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 29/144 (20%) Query: 5 GNKSINAK---LVLLGDVGAGKSSLVLRF---------VKDQFVEFQESTIGAAFFSQTL 52 G+ + +V+LG V GK++L+ + S + A + Sbjct: 8 GDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIA 67 Query: 53 AVNDATVKFEIW-------DTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAK 102 + ++ DT G E + +L A AI+V D+ ++E Sbjct: 68 EPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL- 126 Query: 103 KWVQELQAQGNPNMVMALAGNKSD 126 + ++E + + +A NK D Sbjct: 127 ELLKERR------VPFLIAANKID 144 >4TN1-B nrPDB Length = 345 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 26/133 (19%) Query: 13 LVLLGDVGAGKSSLVLRF----VKDQFVEFQESTIGAAFF--------SQTLAVNDA-TV 59 +LG V GK+ L+ + V++ IGA +F + + + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 60 K---FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 K I DT G E + +L AI+V D+ + E L+ Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES-------LRLLRE 125 Query: 114 PNMVMALAGNKSD 126 +A NK D Sbjct: 126 RKTPFVVALNKID 138 >3T5D-A nrPDB Length = 274 Score = 41.4 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 8/67 (11%) Query: 10 NAKLVLLGDVGAGKSSLVLR-FVKDQFVEFQ-------ESTIGAAFFSQTLAVNDATVKF 61 L+++G+ G GKS+L+ F+ D + + T+ + + Sbjct: 8 EFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLL 67 Query: 62 EIWDTAG 68 I DT G Sbjct: 68 TIVDTPG 74 >2QTH-A nrPDB Length = 364 Score = 41.4 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 20/171 (11%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER- 71 + ++G +GK+SL + ++ + + A+ K + DT G R Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLT--QKVDTKLFTTMSPKRYAIPINNRKIMLVDTVGFIRG 239 Query: 72 ---------YHSLAPMYYRGAAAAIIVFDVTNQAS--FERAKKWVQELQAQGNPNMVMAL 120 + +L+ Y + A I+V D T + E + + L+ G + + Sbjct: 240 IPPQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILV 297 Query: 121 AGNKSD-LLDARKVTAEDAQTYAQENGLFFME---TSAKTATNVKEIFYEI 167 NK D + + + ++E + SA TN++ + +I Sbjct: 298 TLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKI 348 >5M04-A nrPDB Length = 360 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 7/77 (9%) Query: 91 DVTNQASFERAKKWVQELQAQGNPNM--VMALAGNKSDLLDARKVTAEDAQTYAQENGL- 147 D T+ E A+ + EL+ L NK DLLD + E A+ A+ G Sbjct: 271 DGTDP--VENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVE-AEEKAKAIAEALGWE 327 Query: 148 -FFMETSAKTATNVKEI 163 + SA + VK++ Sbjct: 328 DKYYLISAASGLGVKDL 344 >2QAG-C nrPDB Length = 418 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 8/71 (11%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLR-FVKDQFVEFQ-------ESTIGAAFFSQTLAVNDA 57 + L+++G+ G GKS+L+ F+ D + + T+ + Sbjct: 27 KRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGV 86 Query: 58 TVKFEIWDTAG 68 + I DT G Sbjct: 87 QLLLTIVDTPG 97 >2ODE-A nrPDB Length = 350 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 50/187 (26%), Gaps = 44/187 (23%) Query: 37 EFQESTIGAAFFSQTLAVNDATVKFE-------IWDTAGQERYHSLAPMYYRGAAAAIIV 89 T ++ F ++D GQ + G A I Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 90 FDVTNQASF----ERAKKWVQELQAQGN-------PNMVMALAGNKSDLLDAR------- 131 +++ E + + ++ + + L NK DL + + Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRSPLT 283 Query: 132 --------KVTAEDAQTYAQ-----------ENGLFFMETSAKTATNVKEIFYEIARRLP 172 T E+A Y Q ++ T A NV+ +F + + Sbjct: 284 ICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 343 Query: 173 RVQPTEN 179 + E+ Sbjct: 344 KNNLKES 350 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 10 NAKLVLLGDVGAGKSSLVLRFV---KDQFVEFQESTIGAAFFSQTLA 53 KL+LLG +GKS++V + +D + E + +S T+ Sbjct: 32 EVKLLLLGAGESGKSTIVKQMKIIHEDGYSEDECKQYKVVVYSNTIQ 78 >4NCL-A nrPDB Length = 457 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 26/133 (19%) Query: 13 LVLLGDVGAGKSSLVLRF----VKDQFVEFQESTIGAAFF--------SQTLAVNDA-TV 59 +LG V GK+ L+ + V++ IGA +F + + + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 60 K---FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 K I DT G E + +L AI+V D+ + E L+ Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES-------LRLLRE 125 Query: 114 PNMVMALAGNKSD 126 +A NK D Sbjct: 126 RKTPFVVALNKID 138 >4N3G-A nrPDB Length = 603 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 26/133 (19%) Query: 13 LVLLGDVGAGKSSLVLRF----VKDQFVEFQESTIGAAFF--------SQTLAVNDA-TV 59 +LG V GK+ L+ + V++ IGA +F + + + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 60 K---FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 K I DT G E + +L AI+V D+ + E L+ Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES-------LRLLRE 125 Query: 114 PNMVMALAGNKSD 126 +A NK D Sbjct: 126 RKTPFVVALNKID 138 >4UJC-AB nrPDB Length = 627 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 67/214 (31%), Gaps = 64/214 (29%) Query: 13 LVLLGDVGAGKSSLV----LRFVKDQFVEFQESTIG------AAFFSQTLAV---NDATV 59 + +LG V GK+ ++ V+D IG A QT + + V Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 60 K---FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 + I DT G E + +L AI+V D+ + E L+++ Sbjct: 101 RIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESI----NLLKSKKC 156 Query: 114 PNMVMALAGNKSD----------------LLDARKVTAEDAQTYAQE----------NGL 147 +A NK D L +K T ++ + A+ N Sbjct: 157 ---PFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAA 213 Query: 148 FFME------------TSAKTATNVKEIFYEIAR 169 F E TSA T + + Y + Sbjct: 214 LFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLVE 247 >1UDX-A nrPDB Length = 416 Score = 40.2 bits (93), Expect = 5e-04, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 30/176 (17%) Query: 13 LVLLGDVGAGKSSLVLRFV--KDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA--- 67 + L+G AGKSSL+ + + +T+ ++ +F + D Sbjct: 160 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVS---EEERFTLADIPGII 216 Query: 68 ---------GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNM-- 116 G E +A + V D + + + +E+ A + Sbjct: 217 EGASEGKGLGLEFLRHIAR-----TRVLLYVLDAAD-EPLKTLETLRKEVGAYDPALLRR 270 Query: 117 VMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATN---VKEIFYEIAR 169 +A NK DLL+ V A A A+E GL + SA T +KE + + R Sbjct: 271 PSLVALNKVDLLEEEAVKA-LADALARE-GLAVLPVSALTGAGLPALKEALHALVR 324 >3A1W-A nrPDB Length = 168 Score = 40.2 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 53/169 (31%), Gaps = 19/169 (11%) Query: 10 NAKLVLLGDVGAGKSSLVLRFV-KDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 K+ L G GK+SL Q+V G + + D G Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWP---GVTVEKKEGVFTYKGYTINLIDLPG 61 Query: 69 --QERYHSLAPMYYR------GAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 Y S+ R A I+V D N + ++ L+ + + L Sbjct: 62 TYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPE--QSLYLLLEILEMEKK----VIL 115 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 A D + + + G+ + TS+ T ++E+ +I Sbjct: 116 AMTAIDEAKKTGMKIDR-YELQKHLGIPVVFTSSVTGEGLEELKEKIVE 163 >4DCU-A nrPDB Length = 456 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 48/139 (34%), Gaps = 13/139 (9%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + G+ + ++G GKS++ R ++ ++ T G + Sbjct: 14 LVPRGSHMGKPVVAIVGRPNVGKSTIFNRIAGERISIVED-TPGVTRDRIYSSAEWLNYD 72 Query: 61 FEIWDTAGQE--------RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG 112 F + DT G + + A + A I + V + A + V ++ + Sbjct: 73 FNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKILYRT 130 Query: 113 NPNMVMALAGNKSDLLDAR 131 + LA NK D + R Sbjct: 131 KK--PVVLAVNKLDNTEMR 147 Score = 32.9 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 20/145 (13%) Query: 14 VLLGDVGAGKSSLVLRFVKDQ--FVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG--- 68 L+G GKSSLV + ++ V T A + + N F I DTAG Sbjct: 199 CLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDT-SFTYNQQE--FVIVDTAGMRK 255 Query: 69 -------QERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP-NMVMAL 120 E+Y L + + + V V + E + + + + + + Sbjct: 256 KGKVYETTEKYSVLRALKAIDRSEVVAV--VLDGE--EGIIEQDKRIAGYAHEAGKAVVI 311 Query: 121 AGNKSDLLDARKVTAEDAQTYAQEN 145 NK D +D + T ++ + +++ Sbjct: 312 VVNKWDAVDKDESTMKEFEENIRDH 336 >5X4B-A nrPDB Length = 162 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 13/127 (10%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQE-- 70 + ++G GKS++ R ++ ++ T G + F + DT G + Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVTRDRIYSSAEWLNYDFNLIDTGGIDIG 63 Query: 71 ------RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 + A + A I + V + A + V ++ + + LA NK Sbjct: 64 DEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKILYRTKK--PVVLAVNK 119 Query: 125 SDLLDAR 131 D + R Sbjct: 120 LDNTEMR 126 >5KH0-A nrPDB Length = 396 Score = 39.8 bits (92), Expect = 9e-04, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 29/187 (15%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQE---STIGAAFFSQTLAVNDA 57 +A+ G + + + G GKSS + + + +T F S L+ Sbjct: 2 IASGGFRKY---IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVG- 57 Query: 58 TVKFEIWDTAGQERYHSL--------APMYYRGAAAAIIVFDVTNQASFERAKKWVQELQ 109 + DT G + L YR +IV D+ +FE Q ++ Sbjct: 58 PITLI--DTPGLDDVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEE-----QIIK 108 Query: 110 AQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 + +A NK D +D + E ++ + ++ SA ++I I Sbjct: 109 LFKELEIPYFIAINKIDTIDHENIEKEY-----KKYNVPILKVSALKKIGFEKIGKTINS 163 Query: 170 RLPRVQP 176 LP+ Sbjct: 164 ILPKDDE 170 >1LNZ-A nrPDB Length = 342 Score = 39.8 bits (92), Expect = 9e-04, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 21/179 (11%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQ-FVEFQESTIGAAFFSQTLAVNDATVKFEIWD----TA 67 + L+G GKS+L+ + + T + + D Sbjct: 161 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA--DLPGLIE 218 Query: 68 GQERYHSLAPMYYR---GAAAAIIVFDVT---NQASFERAKKWVQELQAQGNPNM--VMA 119 G + L + R + V D++ + ++ QEL Sbjct: 219 GAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQI 278 Query: 120 LAGNKSDLLDARKVTAEDAQTYAQENGLFF--METSAKTATNVKEIFYEIARRLPRVQP 176 + NK D+ +A AE+ + + ++ + SA T ++E+ +E+A +L Sbjct: 279 IVANKMDMPEA----AENLEAFKEKLTDDYPVFPISAVTREGLRELLFEVANQLENTPE 333 >3A1U-A nrPDB Length = 258 Score = 39.4 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 53/169 (31%), Gaps = 19/169 (11%) Query: 10 NAKLVLLGDVGAGKSSLVLRFV-KDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 K+ L G GK+SL Q+V G + + D G Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWP---GVTVEKKEGVFTYKGYTINLIDLPG 61 Query: 69 --QERYHSLAPMYYR------GAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 Y S+ R A I+V D N + ++ L+ + + L Sbjct: 62 TYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPE--QSLYLLLEILEMEKK----VIL 115 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 A D + + + G+ + TS+ T ++E+ +I Sbjct: 116 AMTAIDEAKKTGMKIDR-YELQKHLGIPVVFTSSVTGEGLEELKEKIVE 163 >3PR1-A nrPDB Length = 195 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 30/190 (15%) Query: 4 AGNKSINAK--LVLLGDVGAGKSSLVLRFVKDQF---VEFQESTIGAAFFSQTLAVNDAT 58 G+ K + +G GKSSL+ + + T F+ VN Sbjct: 15 PGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFY----LVNSKY 70 Query: 59 VKFEI-----WDTAGQER--YHSLAPMYYRGAAAAIIVFDVTN-----QASFERAKKWVQ 106 ++ + +ER + L Y++ + +VF + + Q S +W++ Sbjct: 71 YFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMK 130 Query: 107 ELQAQGNPNMVMALAGNKSD--LLDARKVTAEDAQTYAQENG-LFFMETSAKTATNVKEI 163 L N+ + K D + R E+ + + G + TS+ T + E+ Sbjct: 131 SL------NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISEL 184 Query: 164 FYEIARRLPR 173 I+ L Sbjct: 185 LDLISTLLKE 194 >1PUJ-A nrPDB Length = 282 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 M A G K + +++G GKS+L+ R K + + G Q + V Sbjct: 111 MRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRP-GITTSQQWVKVGKE--- 166 Query: 61 FEIWDTAG 68 E+ DT G Sbjct: 167 LELLDTPG 174 >4QJ3-A nrPDB Length = 379 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 44/187 (23%) Query: 36 VEFQESTIGAAFFSQTLAV-------NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAII 88 T + + +V F + D GQ + + + Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 89 V-----FD-----VTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDAR------ 131 + +D N+ E +K + + N + L NK DLL+ + Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 308 Query: 132 ----------KVTAEDAQTYA---------QENGLFF-METSAKTATNVKEIFYEIARRL 171 + A+ A+ + + + + T A N++ +F + + Sbjct: 309 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 368 Query: 172 PRVQPTE 178 ++ E Sbjct: 369 LQLNLKE 375 Score = 27.5 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 13/20 (65%) Query: 10 NAKLVLLGDVGAGKSSLVLR 29 KL+LLG +GKS+ + + Sbjct: 59 ELKLLLLGTGESGKSTFIKQ 78 >2BCJ-Q nrPDB Length = 353 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 44/187 (23%) Query: 36 VEFQESTIGAAFFSQTLAV-------NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAII 88 T + + +V F + D GQ + + + Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 89 V-----FD-----VTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDAR------ 131 + +D N+ E +K + + N + L NK DLL+ + Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 282 Query: 132 ----------KVTAEDAQTYA---------QENGLFF-METSAKTATNVKEIFYEIARRL 171 + A+ A+ + + + + T A N++ +F + + Sbjct: 283 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 342 Query: 172 PRVQPTE 178 ++ E Sbjct: 343 LQLNLKE 349 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Query: 4 AGNKSIN-AKLVLLGDVGAGKSSLVLR 29 G +S KL+LLG +GKS+ + + Sbjct: 26 DGERSRRELKLLLLGTGESGKSTFIKQ 52 >3W5J-A nrPDB Length = 204 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 13/167 (7%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF----EIWDTA 67 ++ LLG GKS+L R I S + + V+ I+D Sbjct: 5 RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEIIDLPGIYDLH 64 Query: 68 GQERYHSLAPMYYRGA--AAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 G + + A+++ + T +++L N+V+ L N S Sbjct: 65 GFSDDEQVVRHFLHDNVPDLALVILNATQIERQMSLLLQLKQLNM----NIVVLL--NMS 118 Query: 126 DLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 D +T + + ++ + + S K T +E + R L Sbjct: 119 DEAKQYGITIDS-RKMSELLQIPVFQLSGKYGTGYQEALQAVTRALR 164 >1SHZ-A nrPDB Length = 340 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 46/154 (29%), Gaps = 37/154 (24%) Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASF-----------ERAKKWV 105 + F+++D GQ + G A I +++ E K + Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQTNRMHESMKLFD 237 Query: 106 QELQAQGNPNMVMALAGNKSDLLDAR---------------KVTAEDAQTYAQ------- 143 + + + L NK DL + + T E+A Y Q Sbjct: 238 SICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLN 297 Query: 144 ----ENGLFFMETSAKTATNVKEIFYEIARRLPR 173 ++ T A NV+ +F + + + Sbjct: 298 KRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIK 331 Score = 31.7 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 4 AGNKSIN-AKLVLLGDVGAGKSSLV--LRFVKDQ-FV----EFQESTIGAAFFS-QTLAV 54 G K+ KL+LLG +GKS+ + +R + Q F E TI + + V Sbjct: 5 DGEKAAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLV 64 Query: 55 NDATVKFEI 63 + K I Sbjct: 65 DARE-KLHI 72 >5VAI-A nrPDB Length = 380 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 13/96 (13%) Query: 48 FSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTN----------QAS 97 F V+ V F ++D GQ + A I V ++ Sbjct: 194 FETKFQVD--KVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNR 251 Query: 98 FERAKKWVQEL-QAQGNPNMVMALAGNKSDLLDARK 132 + A + + + + + L NK DLL + Sbjct: 252 LQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKV 287 >1ZO1-I nrPDB Length = 501 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 12/178 (6%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + ++G V GK+SL+ + + I + + + + F DT G + Sbjct: 7 VTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAF 64 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARK 132 S+ + ++V + + ++ +Q + + +A NK D +A Sbjct: 65 TSMRARGAQATDIVVLVVAADD----GVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADP 120 Query: 133 --VTAEDAQT--YAQENG--LFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMV 184 V E +Q +E G F+ SAK T + E+ I + ++ GM Sbjct: 121 DRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMA 178 >4V8Y-CP nrPDB Length = 339 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 57/173 (32%), Gaps = 38/173 (21%) Query: 13 LVLLGDVGAGKSSLVLRF----VKDQFVEFQESTIGAAFF-------SQTLAVNDATVKF 61 +LG V GK+ L+ + V+ IGA +F + F Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 62 EI-----WDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 ++ DT G E + +L AI+V D+ Q + E K Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR------ 121 Query: 114 PNMVMALAGNKSD-LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFY 165 +A NK D L D + + F ++ AK + V+E F Sbjct: 122 -KAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQ 162 >1G7S-A nrPDB Length = 594 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 68/202 (33%), Gaps = 33/202 (16%) Query: 13 LVLLGDVGAGKSSLV---------LRFVKDQFVEFQESTIGAAF-------FSQTLAVND 56 + +LG V GK++L+ R + I F + ++ + Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRE 67 Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFE-RAKKWVQELQAQGNPN 115 DT G E + +L A AI++ D+ F+ + ++ + L+ Sbjct: 68 TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDIN--EGFKPQTQEALNILRMYRT-- 123 Query: 116 MVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQ 175 +A NK D + +V + + FMET +K V++ L + Sbjct: 124 -PFVVAANKIDRIHGWRV--HEGR--------PFMETFSKQDIQVQQKLDTKVYELVG-K 171 Query: 176 PTENPTGMVLPDRAMDRAVSSS 197 E DR D A S Sbjct: 172 LHEEGFESERFDRVTDFASQVS 193 >4NCF-A nrPDB Length = 457 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 57/173 (32%), Gaps = 38/173 (21%) Query: 13 LVLLGDVGAGKSSLVLRF----VKDQFVEFQESTIGAAFF-------SQTLAVNDATVKF 61 +LG V GK+ L+ + V+ IGA +F + F Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 62 EI-----WDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 ++ DT G E + +L AI+V D+ Q + E K Sbjct: 73 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR------ 126 Query: 114 PNMVMALAGNKSD-LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFY 165 +A NK D L D + + F ++ AK + V+E F Sbjct: 127 -KAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQ 167 >6OIJ-A nrPDB Length = 353 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 54/176 (30%), Gaps = 41/176 (23%) Query: 40 ESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIV-----FD--- 91 T G + + + F + D GQ + + + + +D Sbjct: 178 VPTTGIIEYP----FDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVL 233 Query: 92 --VTNQASFERAKKWVQELQAQGN-PNMVMALAGNKSDLLDAR----------------K 132 N+ E +K + + N + L NK DLL+ + + Sbjct: 234 VESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDYFPEFDGPQ 293 Query: 133 VTAEDAQTYA---------QENGLFF-METSAKTATNVKEIFYEIARRLPRVQPTE 178 A+ A+ + + + + T A N++ +F + + ++ E Sbjct: 294 RDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQLNLKE 349 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Query: 4 AGNKSIN-AKLVLLGDVGAGKSSLVLR 29 G K+ KL+LLG +GKS+ + + Sbjct: 26 DGEKARRELKLLLLGTGESGKSTFIKQ 52 >3WBI-A nrPDB Length = 606 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 57/173 (32%), Gaps = 38/173 (21%) Query: 13 LVLLGDVGAGKSSLVLRF----VKDQFVEFQESTIGAAFF-------SQTLAVNDATVKF 61 +LG V GK+ L+ + V+ IGA +F + F Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 62 EI-----WDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 ++ DT G E + +L AI+V D+ Q + E K Sbjct: 72 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR------ 125 Query: 114 PNMVMALAGNKSD-LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFY 165 +A NK D L D + + F ++ AK + V+E F Sbjct: 126 -KAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQ 166 >4FID-A nrPDB Length = 340 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 35/114 (30%), Gaps = 20/114 (17%) Query: 37 EFQESTIGAAFFSQTLAVN-------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIV 89 E T ++T + F + D GQ ++ AI V Sbjct: 132 EDYVPTEEDLIHNRTKTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCAIFV 191 Query: 90 -----FDV-------TNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 131 +D+ T++ + E + + + V + NK DL + + Sbjct: 192 TSLAEYDMKLYEDGNTSRLT-ESIAVFKDIMTNEFLKGAVKLIFLNKMDLFEEK 244 Score = 31.0 bits (69), Expect = 0.36, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Query: 13 LVLLGDVGAGKSSLVLRFV---KDQFVEFQESTIGAAFFSQTLAV 54 ++LLG +GKS++ + F E + +T ++ S + Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERATHKSSICSNVVTC 52 >4V8Z-CV nrPDB Length = 586 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 57/173 (32%), Gaps = 38/173 (21%) Query: 13 LVLLGDVGAGKSSLVLRF----VKDQFVEFQESTIGAAFF-------SQTLAVNDATVKF 61 +LG V GK+ L+ + V+ IGA +F + F Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 62 EI-----WDTAGQERYHSLAPMYYRGAAAAIIVFDVT---NQASFERAKKWVQELQAQGN 113 ++ DT G E + +L AI+V D+ Q + E K Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR------ 121 Query: 114 PNMVMALAGNKSD-LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFY 165 +A NK D L D + + F ++ AK + V+E F Sbjct: 122 -KAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQ 162 >6OIK-A nrPDB Length = 354 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 45/173 (26%), Gaps = 43/173 (24%) Query: 38 FQESTIGAAFFSQTLAVN-------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVF 90 + T ++ + F ++D GQ + A I Sbjct: 167 DYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCV 226 Query: 91 DVTNQASF----ERAKKWVQELQAQGN-------PNMVMALAGNKSDLLDAR-------- 131 ++ E + + L + + + L NK DL + Sbjct: 227 ALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTI 286 Query: 132 -------KVTAEDAQTYAQ----------ENGLFFMETSAKTATNVKEIFYEI 167 T EDA Y Q ++ T A N++ +F + Sbjct: 287 CFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAV 339 Score = 30.2 bits (67), Expect = 0.57, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 15/103 (14%) Query: 10 NAKLVLLGDVGAGKSSLVLRFV---KDQFV-EFQESTIGAAFFSQTLAVNDATVKFEIWD 65 + KL+LLG +GKS++V + +D F E + + + + D Sbjct: 33 DVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSN---TIQSLAAIVRAMD 89 Query: 66 TAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQEL 108 T G E R A A ++ DV ++ E + + EL Sbjct: 90 TLGIEYGDKE-----RKADAKMVC-DVVSR--MEDTEPFSAEL 124 >5CYO-A nrPDB Length = 274 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 25/71 (35%), Gaps = 9/71 (12%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQES---------TIGAAFFSQTLAVNDA 57 + ++++G G GKS+L+ K + TI + + Sbjct: 1 QGFEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 60 Query: 58 TVKFEIWDTAG 68 +K + DT G Sbjct: 61 RMKLTVIDTPG 71 >1NI3-A nrPDB Length = 392 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 14/91 (15%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G N K ++G GKS+ F +S +G ++ K + Sbjct: 15 GRPGNNLKTGIVGMPNVGKSTF--------FRAITKSVLGNPANYPYATIDPEEAKVAVP 66 Query: 65 DTAGQERYHSLAPMYYRGAA--AAIIVFDVT 93 D ER+ L Y + A + VFD+ Sbjct: 67 D----ERFDWLCEAYKPKSRVPAFLTVFDIA 93 >2WJG-A nrPDB Length = 188 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 17/167 (10%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 G+ + ++ L+G+ GKS++ + + N KF++ Sbjct: 2 GSHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVV 59 Query: 65 DTAGQERYHSLAPMY---YRGAAAAI-----IVFDVTNQASFERAKKWVQELQAQGNPNM 116 D G +SL I +V ++ + + ER +L G Sbjct: 60 DLPG---VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN-- 114 Query: 117 VMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEI 163 + LA NK DL + + + + G+ + SA ++E+ Sbjct: 115 -LLLALNKMDLAKSLGIEID-VDKLEKILGVKVVPLSAAKKMGIEEL 159 >3JCN-b nrPDB Length = 890 Score = 37.1 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 12/178 (6%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + ++G V GK+SL+ + + I + + + + F DT G + Sbjct: 394 VTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAF 451 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARK 132 S+ + ++V + + ++ +Q + + +A NK D +A Sbjct: 452 TSMRARGAQATDIVVLVVAADD----GVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADP 507 Query: 133 --VTAEDAQT--YAQENG--LFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMV 184 V E +Q +E G F+ SAK T + E+ I + ++ GM Sbjct: 508 DRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMA 565 >4WQY-BZ nrPDB Length = 758 Score = 36.7 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 4/70 (5%) Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNM 116 + I DT G + R AI+VFD + + W Q + + + Sbjct: 142 KDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYK----V 197 Query: 117 VMALAGNKSD 126 NK D Sbjct: 198 PRIAFANKMD 207 >6O81-S nrPDB Length = 472 Score = 36.4 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 118 MALAGNKSDLLDARKVTAEDAQTYA-----QENGLFFMETSAKTATNVKEIFYEIARRLP 172 + + NK DL+ + + Q A G + SA+ N++ + I +++P Sbjct: 185 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIP 244 >6FEC-S nrPDB Length = 422 Score = 36.4 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 118 MALAGNKSDLLDARKVTAEDAQTYA-----QENGLFFMETSAKTATNVKEIFYEIARRLP 172 + + NK DL+ + + Q A G + SA+ N++ + I +++P Sbjct: 147 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIP 206 >1ZCB-A nrPDB Length = 362 Score = 36.4 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 42/165 (25%) Query: 41 STIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVT------- 93 T G + + V F++ D GQ + + + + + Sbjct: 187 PTKGIHEYDFEI----KNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLM 242 Query: 94 -NQAS---FERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR--KVTAE------DAQTY 141 ++ + E + + + N+ + L NK+DLL+ + V+ + + + Sbjct: 243 EDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPH 302 Query: 142 A-------------------QENGLFFMETSAKTATNVKEIFYEI 167 Q+ L+ T+A N++ +F ++ Sbjct: 303 CLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDV 347 Score = 32.1 bits (72), Expect = 0.18, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 10/69 (14%) Query: 4 AGNKSIN-AKLVLLGDVGAGKSSLV--LRFVKDQ-FV----EFQESTIGAAFFS-QTLAV 54 G +S K++LLG +GKS+ + +R + Q F E TI + + V Sbjct: 26 DGERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLV 85 Query: 55 NDATVKFEI 63 + K I Sbjct: 86 DARE-KLHI 93 >2WJI-A nrPDB Length = 165 Score = 36.0 bits (82), Expect = 0.010, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 17/162 (10%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ 69 + ++ L+G+ GKS++ + + N KF++ D G Sbjct: 3 SYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPG- 59 Query: 70 ERYHSLAPMY---YRGAAAAI-----IVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 121 +SL I +V ++ + + ER +L G + LA Sbjct: 60 --VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN---LLLA 114 Query: 122 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEI 163 NK DL + + + + G+ + SA ++E+ Sbjct: 115 LNKMDLAKSLGIEID-VDKLEKILGVKVVPLSAAKKMGIEEL 155 >5IRR-A nrPDB Length = 308 Score = 35.6 bits (81), Expect = 0.014, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 24/90 (26%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVK------DQFVEFQESTIGAAFFSQ------TLAV 54 K KL+++GD G GK++L+ + T F T++ Sbjct: 23 KKKYIKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPT--EQFRRDPESLSSTVSW 80 Query: 55 NDATVKFEIW-----DTAG----QERYHSL 75 D + IW DT G + + +L Sbjct: 81 RDEEDRV-IWVYKIQDTPGYGDELDVFRNL 109 >6D9H-A nrPDB Length = 355 Score = 35.6 bits (81), Expect = 0.016, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 46/181 (25%), Gaps = 44/181 (24%) Query: 37 EFQESTIGAAFFSQTLAVN-------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIV 89 T ++ + F+++D Q + G A I Sbjct: 166 SDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225 Query: 90 -----FDV--TNQASFERAKKWVQELQAQGN----PNMVMALAGNKSDLLDAR------- 131 +D+ R ++ + N + + L NK DL + + Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLT 285 Query: 132 -------------------KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLP 172 + ED ++ T + NV+ +F + + Sbjct: 286 ICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCSTDTKNVQFVFDAVTDVII 345 Query: 173 R 173 + Sbjct: 346 K 346 >3H2Y-A nrPDB Length = 368 Score = 35.2 bits (80), Expect = 0.017, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 13/84 (15%) Query: 88 IVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTY----AQ 143 +V + + F+ W+ L N V L GNK+DL+ + V + + + A+ Sbjct: 72 LVVKIVDI--FDFNGSWLPGLHRFVGNNKV-LLVGNKADLIP-KSVKHDKVKHWMRYSAK 127 Query: 144 ENGLF----FMETSAKTATNVKEI 163 + GL F+ SA + E+ Sbjct: 128 QLGLKPEDVFL-ISAAKGQGIAEL 150 Score = 30.2 bits (67), Expect = 0.65, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 6/60 (10%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE----IWDTAG 68 + ++G GKS+ + R +K +F + E+ I + F T ++ + + ++DT G Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVITTSHFPGT-TLDLIDIPLDEESSLYDTPG 220 >3EC1-A nrPDB Length = 369 Score = 35.2 bits (80), Expect = 0.018, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 11/89 (12%) Query: 88 IVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAED----AQTYAQ 143 +V ++ + F+ ++ L N + L GNK+DLL R V + A+ Sbjct: 74 LVVNIVDI--FDFNGSFIPGLPRFAADN-PILLVGNKADLLP-RSVKYPKLLRWMRRMAE 129 Query: 144 ENGLFFME---TSAKTATNVKEIFYEIAR 169 E GL ++ SA + ++ I R Sbjct: 130 ELGLCPVDVCLVSAAKGIGMAKVMEAINR 158 >5H7K-A nrPDB Length = 397 Score = 35.2 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 24/142 (16%) Query: 22 GKSSLVLRFVKDQ---------------FVEFQES---TIGAAFFSQTLAVNDATVKFEI 63 GK++L + F E +++ TI AA S + Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLINL 95 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGN 123 DT G + R IIV D + Q L+ P L N Sbjct: 96 IDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP----VLFIN 151 Query: 124 KSD--LLDARKVTAEDAQTYAQ 143 K D + + + + + +++ Sbjct: 152 KVDRLIRELKLTPQQMMERFSK 173 >5H7J-A nrPDB Length = 743 Score = 35.2 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 24/142 (16%) Query: 22 GKSSLVLRFVKDQ---------------FVEFQES---TIGAAFFSQTLAVNDATVKFEI 63 GK++L + F E +++ TI AA S + Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLINL 95 Query: 64 WDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGN 123 DT G + R IIV D + Q L+ P L N Sbjct: 96 IDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP----VLFIN 151 Query: 124 KSD--LLDARKVTAEDAQTYAQ 143 K D + + + + + +++ Sbjct: 152 KVDRLIRELKLTPQQMMERFSK 173 >1HEY-A nrPDB Length = 128 Score = 35.2 bits (80), Expect = 0.021, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQ 50 K +++G+ G GKS++ + F +++ G ++ Sbjct: 2 DKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNK 44 >5EE0-A nrPDB Length = 395 Score = 35.2 bits (80), Expect = 0.022, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 43/172 (25%), Gaps = 42/172 (24%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK---- 60 G S + K+ ++G GKS+ K + V D Sbjct: 20 GRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQ 79 Query: 61 -----------FEIWDTAGQ-------ERYHSLAPMYYRGAAAAIIVF------------ 90 EI D AG E + + R V Sbjct: 80 LYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHID 139 Query: 91 DVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS-DLLDARKVTAEDAQTY 141 D + + +EL+ + + NK DL + K + + Sbjct: 140 DSVDPVR--DLETIGEELRLKD-----IEFVQNKIDDLEKSMKRSNDKQLKL 184 >4AC9-A nrPDB Length = 482 Score = 34.8 bits (79), Expect = 0.022, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 57/191 (29%), Gaps = 22/191 (11%) Query: 5 GNKSINAK---LVLLGDVGAGKSSLVLRFV-------KDQFVEFQESTIGAAFFSQTLAV 54 G ++ K L + G + GK++L D+ E Q+ I + Sbjct: 11 GRPHMDFKNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKL 70 Query: 55 NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP 114 + + D G A+IV D + + + + Sbjct: 71 ENYRITL--VDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHML--ILDHF-- 124 Query: 115 NMVMALAGNKSDLLDARKVTAEDA------QTYAQENGLFFMETSAKTATNVKEIFYEIA 168 N+ + + KSD ++ + Q+ + SAKT V E+ I Sbjct: 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLII 184 Query: 169 RRLPRVQPTEN 179 L + N Sbjct: 185 TTLNNAEIIRN 195 >4KV9-A nrPDB Length = 412 Score = 34.8 bits (79), Expect = 0.023, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN----DATVKF 61 ++ ++ +G+ G GKS+L+ +F + + + + + +K Sbjct: 37 SQGFVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKL 96 Query: 62 EIWDTAG 68 + +T G Sbjct: 97 TVVETCG 103 >5AR1-A nrPDB Length = 303 Score = 34.8 bits (79), Expect = 0.028, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 12/72 (16%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVKDQFVE---------FQESTIGAAFFSQTLAVNDAT- 58 I ++++G G+G+S+ + Q V+ + I +T+ + D Sbjct: 26 ITFTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEG 85 Query: 59 --VKFEIWDTAG 68 ++ I DT G Sbjct: 86 VKIQLNIIDTPG 97 >5NON-A nrPDB Length = 165 Score = 34.4 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 9/46 (19%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA 57 KL ++GD G G + L + FV +F + + + V++ Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEYK--------EKFILVDNE 87 >2VNE-A nrPDB Length = 201 Score = 34.4 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 9/46 (19%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA 57 KL ++GD G G + L + FV +F + + + V++ Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEYK--------EKFILVDNE 103 >1TAG-A nrPDB Length = 324 Score = 34.4 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 48/186 (25%), Gaps = 54/186 (29%) Query: 37 EFQESTIGAAFFSQTLAVND--------ATVKFEIWDTAGQERYHSLAPMYYRGAAAAII 88 T + + F ++D GQ + G I Sbjct: 135 PGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIF 193 Query: 89 V-----FDVTNQASFERAKKWVQELQAQGN-------PNMVMALAGNKSDLLDAR----- 131 + +D+ + + + L + + L NK D+ + Sbjct: 194 IAALSAYDMVLVED-DEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAH 252 Query: 132 ----------KVTAEDAQTYAQENGLFFME--------------TSAKTATNVKEIFYEI 167 T EDA Y + + F+E T A NVK +F + Sbjct: 253 LSICFPDYNGPNTYEDAGNYIK---VQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAV 309 Query: 168 ARRLPR 173 + + Sbjct: 310 TDIIIK 315 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 8 SINAKLVLLGDVGAGKSSLVLR 29 + KL+LLG +GKS++V + Sbjct: 1 ARTVKLLLLGAGESGKSTIVKQ 22 >4R98-A nrPDB Length = 271 Score = 34.4 bits (78), Expect = 0.032, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 24/179 (13%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG---- 68 + L+G+ +GK++L + + + G + + + + D G Sbjct: 6 IGLIGNPNSGKTTLFNQLTGSRQRVGNWA--GVTVERKEGQFSTTDHQVTLVDLPGTYSL 63 Query: 69 -----QERYHSLAPMYYR---GAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120 Q +Y A I V D + ++ + + + Sbjct: 64 TTISSQTSLDEQIACHYILSGDADLLINVVDAS------NLERNLYLTLQLLELGIPCIV 117 Query: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTEN 179 A N D+ + + + + + G + A NV+ + ++A + R + EN Sbjct: 118 ALNMLDIAEKQNIRI-EIDALSARLGCPVIPLVATDTKNVQFV-LKLA--IDRYKANEN 172 >2XTZ-A nrPDB Length = 354 Score = 34.0 bits (77), Expect = 0.042, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLR---FVKDQFVE----FQESTIGAAFF 48 A G+ KL+LLG +GKS++ + + F E I A + Sbjct: 1 GAMGSGIHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVY 54 Score = 31.3 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 36/124 (29%), Gaps = 28/124 (22%) Query: 38 FQESTIGAAFFSQTLAVNDATVKFE-------------IWDTAGQERYHSLAPMYYRGAA 84 T +++ ++F ++D GQ + G Sbjct: 149 NYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVT 208 Query: 85 AAIIVFDVT--NQASFERAKK-----------WVQELQAQGNPNMVMALAGNKSDLLDAR 131 A I ++ +Q FE +K WV L+ L NK D+ + + Sbjct: 209 AVIFCAAISEYDQTLFEDEQKNRMMETKELFDWV--LKQPCFEKTSFMLFLNKFDIFEKK 266 Query: 132 KVTA 135 + Sbjct: 267 VLDV 270 >1IY1-A nrPDB Length = 254 Score = 33.7 bits (76), Expect = 0.049, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 ++L+G G GK+ L R V + + G+ F + V A V+ ++++TA Sbjct: 52 VLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 104 >2DHR-A nrPDB Length = 499 Score = 33.7 bits (76), Expect = 0.050, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 ++L+G G GK+ L R V + + G+ F + V A V+ ++++TA Sbjct: 67 VLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 119 >4U00-A nrPDB Length = 244 Score = 33.7 bits (76), Expect = 0.050, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 15/51 (29%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIG--AAFFSQTLAVNDATVK 60 KLV++G G+GKS+L+ TI F + V+ +VK Sbjct: 32 KLVIIGPSGSGKSTLIR-------------TINRLEDFQEGEVVVDGLSVK 69 >4Z54-A nrPDB Length = 287 Score = 33.7 bits (76), Expect = 0.051, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 9/68 (13%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKDQFV---------EFQESTIGAAFFSQTLAVNDATVK 60 + ++++G G GKS+LV K Q E T+ + +K Sbjct: 19 DFNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMK 78 Query: 61 FEIWDTAG 68 + DT G Sbjct: 79 LTVIDTPG 86 >3LX8-A nrPDB Length = 272 Score = 33.7 bits (76), Expect = 0.051, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 22/167 (13%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 + L+G+ +GK+SL G ++ V EI D G Sbjct: 6 IALIGNPNSGKTSLFNLITGHNQRVGNWP--GVTVERKSGLVK-KNKDLEIQDLPGIYSM 62 Query: 73 HSLAP--------MYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 +P + + A + + V D TN Q ++ + + +A N Sbjct: 63 SPYSPEEKVARDYLLSQRADSILNVVDATNLER--NLYLTTQLIET----GIPVTIALNM 116 Query: 125 SDLLD--ARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIAR 169 D+LD +K+ + + G+ + TSA T V ++ + A Sbjct: 117 IDVLDGQGKKINVD---KLSYHLGVPVVATSALKQTGVDQVVKKAAH 160 >3JB9-B nrPDB Length = 984 Score = 33.7 bits (76), Expect = 0.055, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 4/72 (5%) Query: 55 NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP 114 T F+ DT G + + ++V DV + ++ Sbjct: 206 KGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTR----IIKHAILH 261 Query: 115 NMVMALAGNKSD 126 +M + L NK D Sbjct: 262 DMPIVLVLNKVD 273 >2YYZ-A nrPDB Length = 359 Score = 33.7 bits (76), Expect = 0.060, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 5/43 (11%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN 55 + LLG G GK++ +L + T G +F L + Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVND 69 >4V89-AW nrPDB Length = 534 Score = 33.3 bits (75), Expect = 0.064, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 17/131 (12%) Query: 4 AGNKSINAKLVLLGDV----GAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 AG +I K++L G G K + K ++E ++ G + + + Sbjct: 24 AGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQR-GISITTSVMQFPYHDC 82 Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVFD----VTNQASFERAKKWVQELQAQGNPN 115 + DT G E + ++V D V ++ + ++ + Sbjct: 83 LVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRT--------RKLMEVTRLRD 134 Query: 116 MVMALAGNKSD 126 + NK D Sbjct: 135 TPILTFMNKLD 145 >1ZCA-A nrPDB Length = 359 Score = 33.3 bits (75), Expect = 0.070, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 46/148 (31%), Gaps = 37/148 (25%) Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVT--------NQAS---FERAKKWV 105 + F++ D GQ + G + + + + ++ + E + Sbjct: 197 KKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFE 256 Query: 106 QELQAQGNPNMVMALAGNKSDL--LDARKVTAEDA------------------------Q 139 + + N+ + L NK DL + V+ + + Sbjct: 257 TIVNNKLFFNVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRK 316 Query: 140 TYAQENGLFFMETSAKTATNVKEIFYEI 167 + LF T+A N++ +F+ + Sbjct: 317 RRNRSKPLFHHFTTAIDTENIRFVFHAV 344 Score = 29.8 bits (66), Expect = 0.80, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 7/61 (11%) Query: 10 NAKLVLLGDVGAGKSSLV--LRFVKD-QFVE----FQESTIGAAFFSQTLAVNDATVKFE 62 K++LLG +GKS+ + +R + +F + TI + + DA K Sbjct: 35 LVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARDKLG 94 Query: 63 I 63 I Sbjct: 95 I 95 >4YMS-J nrPDB Length = 240 Score = 33.3 bits (75), Expect = 0.079, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 +V++G G+GKS+L+ +E T G F + +N+ V Sbjct: 30 VVIIGPSGSGKSTLLR-----CINLLEEPTKGEVFID-GVKINNGKVNIN 73 >3R7W-B nrPDB Length = 331 Score = 33.3 bits (75), Expect = 0.079, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 25/200 (12%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIG-AAFFSQTLAVNDATVKFEIWDTAGQER 71 ++L+G GKSS+ + T+ + + +L + + + GQ Sbjct: 2 VLLMGVRRCGKSSICKVVFHN---MQPLDTLYLESTSNPSLEHFSTLIDLAVMELPGQLN 58 Query: 72 YHSLAPMYYRGA---AAAIIVFDVTNQASFERA---KKWVQELQAQGNPNMVMALAGNKS 125 Y P Y + +V+ + +Q + A + E + NP++ + + +K Sbjct: 59 Y--FEPSYDSERLFKSVGALVYVIDSQDEYINAITNLAMIIEYAYKVNPSINIEVLIHKV 116 Query: 126 D----------LLDARKVTAEDAQTYA-QENGLFFMETSAKTATNVKEIFYEIARR-LPR 173 D D + T E+ + F TS ++ E F I ++ +P Sbjct: 117 DGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVSFYLTSIFD-HSIYEAFSRIVQKLIPE 175 Query: 174 VQPTENPTGMVLPDRAMDRA 193 + EN ++ +++A Sbjct: 176 LSFLENMLDNLIQHSKIEKA 195 >6G12-A nrPDB Length = 301 Score = 32.9 bits (74), Expect = 0.092, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 6/67 (8%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEF-QESTIGAAFFSQTLAVNDATVKF 61 A G K + +++G GKS+L+ + K + + G Q + V +A Sbjct: 120 AKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKP--GVTKQQQWIKVGNA---L 174 Query: 62 EIWDTAG 68 ++ DT G Sbjct: 175 QLLDTPG 181 >1S0U-A nrPDB Length = 408 Score = 32.9 bits (74), Expect = 0.093, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 11/115 (9%) Query: 84 AAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQ 143 AI+V + K+ + L+ G + + NK DL+D ++ AE+ + Sbjct: 106 DGAILVIAANEPCPQPQTKEHLMALEILGIDK--IIIVQNKIDLVDEKQ--AEENYEQIK 161 Query: 144 EN-------GLFFMETSAKTATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMD 191 E + SA N+ + I +P + + T + R+ D Sbjct: 162 EFVKGTIAENAPIIPISAHHEANIDVLLKAIQDFIPTPKRDPDATPRMYVARSFD 216 >4Z8X-A nrPDB Length = 497 Score = 32.9 bits (74), Expect = 0.098, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 ++L G+ G GK+ L+ + + + S G+ F + V A V+ ++++TA Sbjct: 54 VLLYGEPGVGKT-LLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVR-DLFETA 106 >3P27-A nrPDB Length = 483 Score = 32.9 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 48/195 (24%) Query: 14 VLLGDVGAGKSSLVLRFVKD------------------------QFVEFQESTIGAAFFS 49 V+LG V AGKS+L+ R + D +F + T Sbjct: 37 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 96 Query: 50 QTLAV-----NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKW 104 T+++ + F I D G + A M A AI+ D + +FE Sbjct: 97 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 155 Query: 105 VQELQAQ-------GNPNMVMALAGNKSDLLDARKVTAEDAQTYAQEN--GLFFME---- 151 + + G N+++A+ NK D +D + E+ ++ + F E Sbjct: 156 DGQTKEHMLLASSLGIHNLIIAM--NKMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDNIN 213 Query: 152 ---TSAKTATNVKEI 163 S + V +I Sbjct: 214 WVPISGFSGEGVYKI 228 >3IZQ-1 nrPDB Length = 611 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 48/195 (24%) Query: 14 VLLGDVGAGKSSLVLRFVKD------------------------QFVEFQESTIGAAFFS 49 V+LG V AGKS+L+ R + D +F + T Sbjct: 171 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 230 Query: 50 QTLAV-----NDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKW 104 T+++ + F I D G + A M A AI+ D + +FE Sbjct: 231 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 289 Query: 105 VQELQAQ-------GNPNMVMALAGNKSDLLDARKVTAEDAQTYAQEN--GLFFME---- 151 + + G N+++A+ NK D +D + E+ ++ + F E Sbjct: 290 DGQTKEHMLLASSLGIHNLIIAM--NKMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDNIN 347 Query: 152 ---TSAKTATNVKEI 163 S + V +I Sbjct: 348 WVPISGFSGEGVYKI 362 >2OHF-A nrPDB Length = 396 Score = 32.1 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 19/80 (23%), Gaps = 15/80 (18%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK---- 60 G + K+ ++G GKS+ Q + V D Sbjct: 17 GRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQ 76 Query: 61 -----------FEIWDTAGQ 69 + D AG Sbjct: 77 YHKPASKIPAFLNVVDIAGL 96 >1YE8-A nrPDB Length = 178 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 16/21 (76%) Query: 12 KLVLLGDVGAGKSSLVLRFVK 32 K+++ G+ G GK++LV + V+ Sbjct: 2 KIIITGEPGVGKTTLVKKIVE 22 >2IYT-A nrPDB Length = 184 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 7/66 (10%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71 K VL+G G+GKS++ R K V ++ + + ++ +I+ T G++ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRT------GRSI-ADIFATDGEQE 56 Query: 72 YHSLAP 77 + + Sbjct: 57 FRRIEE 62 >6HZK-A nrPDB Length = 333 Score = 31.7 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 3/24 (12%) Query: 12 KLVLLG---DVGAGKSSLVLRFVK 32 ++VL+G D G GKS+ + R Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLAD 29 >5LKM-A nrPDB Length = 452 Score = 31.7 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 25/141 (17%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERY 72 +++ GD G GKS+L+L+ V Q S +G + + +K ER Sbjct: 91 VLIGGDPGIGKSTLLLQ------VSTQLSQVGTVLYVSGEE-SAQQIKLRA------ERL 137 Query: 73 HSLAPMYYRGAAAAIIVFDVTNQASF-ERAKKWVQELQAQGNPNMVMA--LAGNKSDLLD 129 + +Y ++ TN S ++ + + +M+ ++G + + Sbjct: 138 GDIDSEFY--------LYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQ 189 Query: 130 ARKVTAEDAQTYAQENGLFFM 150 R+VTAE Q A+ N + Sbjct: 190 VREVTAELMQ-LAKTNNIAIF 209 >4TLD-A nrPDB Length = 253 Score = 31.7 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 + G I ++ G G GK+ ++F+ + +EF E + F + F Sbjct: 32 SHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFG 91 Query: 63 IWDTA 67 WD A Sbjct: 92 -WDLA 95 >2R65-A nrPDB Length = 268 Score = 31.3 bits (70), Expect = 0.24, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 48/118 (40%), Gaps = 16/118 (13%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQ--- 69 ++L+G G GK+ L+ + V + S G++F + + + V+ ++++TA + Sbjct: 47 VLLVGPPGTGKT-LLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVR-DLFETAKKQAP 104 Query: 70 -----ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 + ++ G V ++ + + + E+ G+ N + + Sbjct: 105 SIIFIDEIDAIGKSRAAGG-----VVSGNDERE-QTLNQLLAEMDGFGSENAPVIVLA 156 >2IW3-A nrPDB Length = 986 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 5/47 (10%) Query: 8 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV 54 S+++++ ++G GAGKS+L+ T G + + + Sbjct: 697 SLSSRIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHENCRI 738 >3S1A-A nrPDB Length = 525 Score = 31.3 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Query: 3 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFE 62 + G I ++ G G GK+ ++F+ + +EF E + F + F Sbjct: 32 SHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFG 91 Query: 63 IWDTA 67 WD A Sbjct: 92 -WDLA 95 >6F1T-i nrPDB Length = 492 Score = 31.0 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 17/76 (22%) Query: 116 MVMALAGNKSDLLDARKVTAEDA--------------QTYAQENGLFFMETSAKTATNVK 161 + + + K D + V ++ + + + G + TS K N+ Sbjct: 225 IPVLVVCTKCDAVS---VLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLD 281 Query: 162 EIFYEIARRLPRVQPT 177 ++ I + T Sbjct: 282 LLYKYIVHKTYGFHFT 297 Score = 31.0 bits (69), Expect = 0.34, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 30/142 (21%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLA----VNDATVKFEIWD--- 65 +++ G+ G+GK++L+ + + + G + ++ + I D Sbjct: 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSVHDEDRDDHTRCNVWILDGDL 113 Query: 66 -TAGQERYHSLAPMYYRGAAAAIIVFDVTNQAS-FERAKKWVQELQAQGNPNMVMALAGN 123 G ++ +++ I V D++ + E +KW L+ Sbjct: 114 YHKGLLKF-AVSAESLPET-LVIFVADMSRPWTVMESLQKWASVLREHI----------- 160 Query: 124 KSDLLDARKVTAEDAQTYAQEN 145 D K+ E + ++ Sbjct: 161 -----DKMKIPPEKMRELERKF 177 >5A9Z-CA nrPDB Length = 593 Score = 31.0 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 26/129 (20%) Query: 22 GKSSLVLRFVK--DQFVEFQES------------TIGAAFFSQTLAVNDATVKFEIWDTA 67 GK++LV + ++ F E+ G ++ A + I DT Sbjct: 17 GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWDYRINIVDTP 76 Query: 68 GQERYHSLAPMYYRGAAAAIIVFDVTN----QASFERAKKWVQELQAQGNPNMVMALAGN 123 G + + ++V D + Q F K + L+ + + N Sbjct: 77 GHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLK-------PIVVI-N 128 Query: 124 KSDLLDARK 132 K D AR Sbjct: 129 KVDRPGARP 137 >3J3U-A nrPDB Length = 810 Score = 31.0 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 VL+G+ G GK+++ + Q + + I + + ++ TV Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRD--KRVMTLDMGTV 247 >2WIC-A nrPDB Length = 267 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 45/148 (30%), Gaps = 17/148 (11%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF-------EIWD 65 + L+G+ +GK++L + + + + A D V + Sbjct: 6 VGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLVDLPGTYSLTT 65 Query: 66 TAGQERYHSLAPMYYR---GAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAG 122 + Q +Y A I V D + ++ + + +A Sbjct: 66 ISSQTSLDEQIACHYILSGDADMLINVVDAS------NLERNLYLTLQLLELGIPCVVAL 119 Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFM 150 N D+ + ++V + A G + Sbjct: 120 NMLDIAEKQQVRID-IDALAARLGCPVI 146 >5TY0-A nrPDB Length = 422 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 4/70 (5%) Query: 57 ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNM 116 + + I DT G + R A++VFD + W Q G P + Sbjct: 81 ESHRINIIDTPGHVDFMIEVERSLRVLDGAVVVFDSVAGVEPQSETVWRQ-ANKYGVPRI 139 Query: 117 VMALAGNKSD 126 V NK D Sbjct: 140 VFV---NKMD 146 >6F1Y-j nrPDB Length = 337 Score = 31.0 bits (69), Expect = 0.36, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 17/76 (22%) Query: 116 MVMALAGNKSDLLDARKVTAEDA--------------QTYAQENGLFFMETSAKTATNVK 161 + + + K D + V ++ + + + G + TS K N+ Sbjct: 189 IPVLVVCTKCDAVS---VLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLD 245 Query: 162 EIFYEIARRLPRVQPT 177 ++ I + T Sbjct: 246 LLYKYIVHKTYGFHFT 261 Score = 31.0 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 48/142 (33%), Gaps = 30/142 (21%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLA----VNDATVKFEIWD--- 65 +++ G+ G+GK++L+ + + + G + ++ + I D Sbjct: 21 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSVHDEDRDDHTRCNVWILDGDL 77 Query: 66 -TAGQERYHSLAPMYYRGAAAAIIVFDVTNQAS-FERAKKWVQELQAQGNPNMVMALAGN 123 G ++ +++ I V D++ + E +KW L+ Sbjct: 78 YHKGLLKF-AVSAESLPET-LVIFVADMSRPWTVMESLQKWASVLREHI----------- 124 Query: 124 KSDLLDARKVTAEDAQTYAQEN 145 D K+ E + ++ Sbjct: 125 -----DKMKIPPEKMRELERKF 141 >3TR5-A nrPDB Length = 528 Score = 31.0 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 10/133 (7%) Query: 4 AGNKSINAKLVLLG----DVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 AG ++ KL+L G G KS R ++E ++ G + + + Sbjct: 24 AGKTTLTEKLLLFGGAIQLAGTIKSRKAARHATSDWMELEKQR-GISVTTSVMQFPYKDY 82 Query: 60 KFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMA 119 + DT G + +A++V D + ++ ++ + + Sbjct: 83 LINLLDTPGHADFTEDTYRTLTAVDSALMVIDAAKGVE----PRTIKLMEVCRLRHTPIM 138 Query: 120 LAGNKSDLLDARK 132 NK D D R Sbjct: 139 TFINKMD-RDTRP 150 >3J81-k nrPDB Length = 527 Score = 31.0 bits (69), Expect = 0.40, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Query: 118 MALAGNKSDLLDARKVTAEDAQTYAQEN-------GLFFMETSAKTATNVKEIFYEIARR 170 + + NK DL+ R+ +A + Q + G + SA+ N+ + I + Sbjct: 244 VIILQNKVDLM--REESALEHQKSILKFIRGTIADGAPIVPISAQLKYNIDAVNEFIVKT 301 Query: 171 LP 172 +P Sbjct: 302 IP 303 >2YV5-A nrPDB Length = 302 Score = 31.0 bits (69), Expect = 0.40, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQEST 42 +L G G GKSS++ R ++ + S Sbjct: 168 CILAGPSGVGKSSILSRLTGEELRTQEVSE 197 >1SUL-A nrPDB Length = 195 Score = 30.6 bits (68), Expect = 0.43, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 20/127 (15%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG---- 68 + L G GKSS + + + + S G +ND D G Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDE---LHFVDVPGYGFA 82 Query: 69 ------QERYHSLAPMYYRGAA---AAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMA 119 +E + + Y A + + D+ + S + + + L+ G + + Sbjct: 83 KVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQ-MYEFLKYYG---IPVI 138 Query: 120 LAGNKSD 126 + K+D Sbjct: 139 VIATKAD 145 >4RY2-A nrPDB Length = 730 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 11/48 (22%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + ++G+ G+GK++L + F G + +N ++K Sbjct: 518 VAIVGESGSGKTTLAKLLMN-----FYSPEKGD------ILINGHSIK 554 >5IDV-A nrPDB Length = 279 Score = 30.6 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 13/19 (68%) Query: 13 LVLLGDVGAGKSSLVLRFV 31 + L+G GAGK+SLV V Sbjct: 68 VALVGRSGAGKTSLVNMLV 86 >3V9H-A nrPDB Length = 566 Score = 30.6 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%) Query: 92 VTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 V + SF R KKW++ A+ +P++ + LAG K D Sbjct: 394 VIDAKSFARIKKWLE--HARSSPSLTI-LAGGKCD 425 >5DGX-A nrPDB Length = 256 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 3/52 (5%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA-FFSQTLAVNDATVKFEI 63 + +G G+GK++L +F E I ++ L + + I Sbjct: 47 VAFVGKSGSGKTTLTSIIS--RFYTQHEGEILLDGVDTRELTLENLRSHLSI 96 >5ZLU-EE nrPDB Length = 497 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 14/19 (73%) Query: 12 KLVLLGDVGAGKSSLVLRF 30 ++ L+GD GAGKSSL+ Sbjct: 32 RIGLVGDNGAGKSSLLKVL 50 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Query: 12 KLVLLGDVGAGKSSLVLRFVK--DQFVEFQESTIGAAFFSQT 51 K+ + G G GK+SL+ + D ++ IG +F+QT Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIG--YFTQT 363 >5C78-A nrPDB Length = 564 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 12/16 (75%) Query: 12 KLVLLGDVGAGKSSLV 27 K+ +G+ G GKS+LV Sbjct: 377 KIAFIGESGCGKSTLV 392 >1S4Q-A nrPDB Length = 228 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 47/146 (32%), Gaps = 31/146 (21%) Query: 3 AAGNKSINAKLVLL-GDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF 61 A G + ++V+L G GKS+ V+R ++++ S + V+ F Sbjct: 15 ARGQPAAVGRVVVLSGPSAVGKST-VVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHF 73 Query: 62 -------EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP 114 ++ D + + +R A Q ++A Sbjct: 74 IDPTRFQQLIDQGELLEWAEIHGGLHRSGTLA-------------------QPVRAAAAT 114 Query: 115 NMVMALAGNKSDLLDARKVTAEDAQT 140 + + + + DL AR + + Sbjct: 115 GVPVLI---EVDLAGARAIKKTMPEA 137 >6CS8-A nrPDB Length = 303 Score = 30.6 bits (68), Expect = 0.53, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 42/173 (24%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWDTAGQ 69 ++++G G GK++ + + + QF + +S + G F + + + ++W GQ Sbjct: 102 ILMVGVNGVGKTTTIGKLAR-QFEQQGKSVMLAAGDTFRAAAVE------QLQVW---GQ 151 Query: 70 -ERYHSLAPMYYRGAAAAIIVFD-------------VTNQA-SFERAKKWVQELQAQGNP 114 +A GA +A ++FD + + A + ++EL+ Sbjct: 152 RNNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKK---- 205 Query: 115 NMVMALAGNKSDLLDARKV----TAEDAQTYAQENGLFFMETSAKTATNVKEI 163 + K D+ +V A Q A F E T + ++ Sbjct: 206 ---IVRVMKKLDVEAPHEVMLTIDASTGQN-AVSQAKLFHEAVGLTGITLTKL 254 >5OCH-A nrPDB Length = 612 Score = 30.2 bits (67), Expect = 0.55, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 17/51 (33%) Query: 13 LVLLGDVGAGKS---SLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 + L+G G GK+ SL+ RF + T G + ++ ++ Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV------VMLDGRDLR 430 >2IT1-A nrPDB Length = 362 Score = 30.2 bits (67), Expect = 0.57, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQ 50 + LLG G+GKS+L+ + T G +F + Sbjct: 32 MALLGPSGSGKSTLLYTIAG-----IYKPTSGKIYFDE 64 >3PEN-A nrPDB Length = 403 Score = 30.2 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 9/62 (14%) Query: 118 MALAGNKSD-------LLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARR 170 + + NK D L R++ T+A+ + + SA N+ + I Sbjct: 132 LIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAE--NVPIIPVSALHKINIDSLIEGIEEY 189 Query: 171 LP 172 + Sbjct: 190 IK 191 >4MYH-A nrPDB Length = 598 Score = 30.2 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 17/52 (32%) Query: 12 KLVLLGDVGAGKSS---LVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 K ++G G+GKS+ LV RF + G + +N +K Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG------RILINGRDIK 404 >2QU8-A nrPDB Length = 228 Score = 29.8 bits (66), Expect = 0.71, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 62/185 (33%), Gaps = 27/185 (14%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAV---NDATVKFEIWDTAGQ 69 ++L G GKSS + + S F ++ L V + K++I DT G Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVDVQSYS-----FTTKNLYVGHFDHKLNKYQIIDTPGL 86 Query: 70 E----------RYHSLAPMYYRGAAAAIIVFDVTNQ--ASFERAKKWVQELQAQGNPNMV 117 ++ + + + + D++ Q + + +++ + + Sbjct: 87 LDRAFENRNTIEMTTITALAHING-VILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSI 145 Query: 118 MALAGNKSDLLDARKVTAEDAQTYAQ-----ENGLFFMETSAKTATNVKEIFYEIARRLP 172 + NK D + ++ ++ Q +N + F S T V++ L Sbjct: 146 VIGF-NKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQAKITACELLK 204 Query: 173 RVQPT 177 Q Sbjct: 205 NDQAE 209 >1JAL-A nrPDB Length = 363 Score = 29.8 bits (66), Expect = 0.72, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 11/24 (45%) Query: 9 INAKLVLLGDVGAGKSSLVLRFVK 32 + K ++G GKS+L K Sbjct: 1 MGFKCGIVGLPNVGKSTLFNALTK 24 >3PXG-A nrPDB Length = 468 Score = 29.8 bits (66), Expect = 0.74, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN 55 VL+G+ G GK+++ + Q + + I + + ++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRD--KRVMTLD 243 >6EM8-A nrPDB Length = 818 Score = 29.8 bits (66), Expect = 0.74, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 VL+G+ G GK+++ + T+ + ++++ TV Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKD---KRVMSLDMGTV 247 >4N1A-A nrPDB Length = 589 Score = 29.8 bits (66), Expect = 0.74, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 30/128 (23%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQEST----IGAAFFSQTLAVNDATVKFE------- 62 ++ GD GKS+L+ R + +E I + L V + Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSLLDVATTEHQIGYAASSTA 445 Query: 63 ----IWDTAGQ------------ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQ 106 + D G E+ S ++ GA ++V D A+ + + + Sbjct: 446 ASSLVRDIKGAMEARLPPPDLTPEQLRS--RSWWTGAELFLVVDDYEMVATSDNPLRPLA 503 Query: 107 ELQAQGNP 114 EL Q Sbjct: 504 ELLPQARD 511 >3PXI-A nrPDB Length = 758 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN 55 VL+G+ G GK+++ + Q + + I + + ++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRD--KRVMTLD 243 >6H7G-A nrPDB Length = 346 Score = 29.8 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%) Query: 12 KLVLLG---DVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 K V++G D G GKS+ + R + F + G S TL + TV Sbjct: 6 KTVVIGLAADSGCGKSTFMRR-MTSIFGGVPKPPAGGNPDSNTLISDMTTV 55 >5GAD-l nrPDB Length = 497 Score = 29.8 bits (66), Expect = 0.80, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 63/173 (36%), Gaps = 42/173 (24%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTI---GAAFFSQTLAVNDATVKFEIWDTAGQ 69 ++++G G GK++ + + + QF + +S + G F + + + ++W GQ Sbjct: 296 ILMVGVNGVGKTTTIGKLAR-QFEQQGKSVMLAAGDTFRAAAVE------QLQVW---GQ 345 Query: 70 -ERYHSLAPMYYRGAAAAIIVFD-------------VTNQA-SFERAKKWVQELQAQGNP 114 +A GA +A ++FD + + A + ++EL+ Sbjct: 346 RNNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKK---- 399 Query: 115 NMVMALAGNKSDLLDARKV----TAEDAQTYAQENGLFFMETSAKTATNVKEI 163 + K D+ +V A Q A F E T + ++ Sbjct: 400 ---IVRVMKKLDVEAPHEVMLTIDASTGQN-AVSQAKLFHEAVGLTGITLTKL 448 >3V70-A nrPDB Length = 247 Score = 29.8 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 29/144 (20%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT---VKFE 62 +L+L+G GAGKS+ + + S +GA ++ E Sbjct: 17 QGESTRRLILVGRTGAGKSATGNSILGQR---RFFSRLGATSVTRACTTGSRRWDKCHVE 73 Query: 63 IWDTAGQERYHSL----------APMYY----RGAAAAIIVFDVTNQASFERAKKW-VQE 107 + DT + + S Y G A ++V T F + V++ Sbjct: 74 VVDTP--DIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLV---TQLGRFTAQDQQAVRQ 128 Query: 108 LQAQGNPNMV---MALAGNKSDLL 128 ++ +++ + + K DL Sbjct: 129 VRDMFGEDVLKWMVIVFTRKEDLA 152 >6EMW-E nrPDB Length = 181 Score = 29.8 bits (66), Expect = 0.83, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 VL+G+ G GK+++ + T+ + ++++ TV Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKD---KRVMSLDMGTV 86 >6IC4-I nrPDB Length = 233 Score = 29.8 bits (66), Expect = 0.84, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 26/112 (23%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYH 73 ++G G GK++L+ R + Q V Q + ++ D A R Sbjct: 31 AIMGPSGTGKTTLL-RLIGGQLVPDQG----------EVLLDGK-------DIAQMSRQR 72 Query: 74 SLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKS 125 + M ++ A T+ + +E + N++ L K Sbjct: 73 ARMGMLFQSGALF------TDMSVYENVA--FPIRAHTLSENLIAELVALKL 116 >5OWV-A nrPDB Length = 732 Score = 29.8 bits (66), Expect = 0.84, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 7 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVND-ATVKFEIWD 65 +++ + + G + AGKSSL+ +K+ F+ S I L+ K WD Sbjct: 159 QNLEFNIAITGVMNAGKSSLLNALLKEDFLG--VSNIPETANLTVLSYGKSEEAKIYFWD 216 >5ANB-A nrPDB Length = 398 Score = 29.8 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 5/50 (10%) Query: 118 MALAGN-----KSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 162 + L G K L + +T + + ++ L F++TS+K + + Sbjct: 330 LMLKGCVAGPRKRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQ 379 >2AXV-A nrPDB Length = 317 Score = 29.8 bits (66), Expect = 0.87, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%) Query: 128 LDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180 D+R ++ E+ +++ G+ F E + N K + +L + NP Sbjct: 37 ADSRPISVEELSKFSERLGVNFFEILNRAGMNTKSVNETGKEKLLISKIFTNP 89 >3GD7-A nrPDB Length = 390 Score = 29.4 bits (65), Expect = 0.93, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 15/20 (75%) Query: 12 KLVLLGDVGAGKSSLVLRFV 31 ++ LLG G+GKS+L+ F+ Sbjct: 49 RVGLLGRTGSGKSTLLSAFL 68 >3B5X-A nrPDB Length = 582 Score = 29.4 bits (65), Expect = 0.95, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 12/19 (63%) Query: 13 LVLLGDVGAGKSSLVLRFV 31 + L+G G+GKS++ F Sbjct: 372 VALVGRSGSGKSTIANLFT 390 >1R6B-X nrPDB Length = 758 Score = 29.4 bits (65), Expect = 0.95, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 14 VLLGDVGAGKSS----LVLRFVKDQFVE 37 +L+G+ G GK++ L R V+ E Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPE 238 >3EC2-A nrPDB Length = 180 Score = 29.4 bits (65), Expect = 0.96, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 28/99 (28%), Gaps = 18/99 (18%) Query: 13 LVLLGDVGAGKS-----SLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF------ 61 L +G G GK+ +L + K + T F + L KF Sbjct: 41 LTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRLKHLMDEGKDTKFLKTVLN 100 Query: 62 ---EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQAS 97 + D G ER II + N S Sbjct: 101 SPVLVLDDLGSERLSDWQRELIS----YIITYRYNNLKS 135 >5OFO-C nrPDB Length = 871 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 14 VLLGDVGAGKSS----LVLRFVKDQFVE 37 VL+G+ G GK++ L R + + E Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >4CIU-A nrPDB Length = 727 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 14 VLLGDVGAGKSS----LVLRFVKDQFVE 37 VL+G+ G GK++ L R + + E Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >5D4W-A nrPDB Length = 926 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 12/14 (85%) Query: 14 VLLGDVGAGKSSLV 27 VL+G+ G GK+++V Sbjct: 220 VLIGEPGVGKTTIV 233 >2P5T-B nrPDB Length = 253 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 4 AGNKSINAKLVLL--GDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQT 51 G KS + +L G GAGK+++ R + +F G +F SQ Sbjct: 24 RGKKSSKQPIAILLGGQSGAGKTTI-HRIKQKEFQGNIVIIDGDSFRSQH 72 >6I3O-A nrPDB Length = 677 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 17/27 (62%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQ 39 L+++G+ G+GK++ V +++ + Sbjct: 31 LIVVGETGSGKTTQVTQYLAEAGFTKY 57 >1ZUN-B nrPDB Length = 434 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 71/207 (34%), Gaps = 58/207 (28%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQES------------TIGAAF- 47 + K + + + G+V GKS+L+ R + D + +++ T G Sbjct: 16 LGQHERKEM-LRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVD 74 Query: 48 -----------FSQTLAVN-------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIV 89 Q + ++ A KF I DT G E+Y AII+ Sbjct: 75 LALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIIL 134 Query: 90 FDV-------TNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQT-- 140 D T + S+ + G ++V+A+ NK DL + E + Sbjct: 135 VDARYGVQTQTRRHSYIAS--------LLGIKHIVVAI--NKMDLNGFDERVFESIKADY 184 Query: 141 --YAQENG-----LFFMETSAKTATNV 160 +A+ + F+ SA NV Sbjct: 185 LKFAEGIAFKPTTMAFVPMSALKGDNV 211 >5MKK-A nrPDB Length = 611 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 11/41 (26%) Query: 12 KLVLLGDVGAGKS---SLVLRFVKDQFVEFQESTIGAAFFS 49 K+ L+G GAGK+ SL+ RF + G F Sbjct: 387 KVALVGATGAGKTSVVSLIARF--------YDPQRGCVFLD 419 >1YR7-A nrPDB Length = 262 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN 55 +V +G G+GK++L F + ++ + + + L Sbjct: 17 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYE 59 >1QVR-A nrPDB Length = 854 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 14 VLLGDVGAGKSS----LVLRFVKDQFVE 37 VL+G+ G GK++ L R VK E Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 >4HZI-A nrPDB Length = 294 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 11/63 (17%) Query: 13 LVLLGDVGAGKSSLVL-----RFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 67 VLLG GAGKS+LV + + + T G +A+ D + I D++ Sbjct: 63 CVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGE------IAIQDLRKRIGILDSS 116 Query: 68 GQE 70 QE Sbjct: 117 QQE 119 >1JBK-A nrPDB Length = 195 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 14 VLLGDVGAGKSS----LVLRFVKDQFVE 37 VL+G+ G GK++ L R + + E Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >6HA8-V nrPDB Length = 548 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 15/23 (65%) Query: 12 KLVLLGDVGAGKSSLVLRFVKDQ 34 K+ ++G G+GK++L+ + + Sbjct: 325 KVAIIGPNGSGKTTLLNIILGQE 347 >2RGK-A nrPDB Length = 421 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 11/68 (16%) Query: 42 TIGAAFFSQTLAVNDATVKFEIWDTA--GQERYHSLAPMYYRGAAAAIIVFDVTNQASFE 99 TI + + + E WD A E Y A +IV+DVT+ Sbjct: 138 TIEII--EKYFWSEEEQMCLESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTHD---- 190 Query: 100 RAKKWVQE 107 KKW+ Sbjct: 191 --KKWLDR 196 >2OUK-A nrPDB Length = 263 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 11/48 (22%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 +V++G G+GKS+ + + F + ++ +K Sbjct: 53 VVVIGPSGSGKSTFLRCL-----------NLLEDFDEGEIIIDGINLK 89 >2ZBL-A nrPDB Length = 421 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 7/64 (10%) Query: 45 AAFFSQTLAVNDATVKFEIWDTA-GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKK 103 + + + E WD A Q + A +IV+DVT+ KK Sbjct: 139 IEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHD------KK 192 Query: 104 WVQE 107 W+ Sbjct: 193 WLDR 196 >5B3F-A nrPDB Length = 343 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAA 46 + + GD G+GKS+ R + D F E S+I Sbjct: 40 IGVAGDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >4IXM-A nrPDB Length = 318 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATV 59 +L G +GAGK++L+ R + ++ ++ + I F ++V+D + Sbjct: 8 LLTGFLGAGKTTLL-RHILNEQHGYKIAVIENEFGE--VSVDDQLI 50 >1U0L-A nrPDB Length = 301 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 33/98 (33%), Gaps = 4/98 (4%) Query: 75 LAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPN-MVMALAGNKSDLLDARKV 133 L + I+V V + + + + N + + NK DL D + Sbjct: 77 LTKPHVANVDQVILVVTVKMPET---STYIIDKFLVLAEKNELETVMVINKMDLYDEDDL 133 Query: 134 TAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 ++TSAKT ++E+ + ++ Sbjct: 134 RKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKI 171 >2GA8-A nrPDB Length = 359 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 6/47 (12%) Query: 13 LVLLGDVGAGKSSLVLRFVK------DQFVEFQESTIGAAFFSQTLA 53 ++L+G G+GKS++ + F+ + I + + Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMV 73 >5MRE-WW nrPDB Length = 401 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 12 KLVLLGDVGAGKSSLVLR 29 K ++ G+ G GK+ L+ + Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >1OFI-A nrPDB Length = 310 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQ---FVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 ++++G G GK+ + R K F++ E+T V+ ++ ++ D+AG Sbjct: 53 ILMIGPTGVGKTEIARRLAKLANAPFIKV-EATKFTEVGYVGKEVD--SIIRDLTDSAG 108 >6QUZ-B nrPDB Length = 599 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 3/22 (13%) Query: 12 KLVLLGDVGAGKSS---LVLRF 30 K+ L+G G+GK++ L++RF Sbjct: 383 KVALVGPTGSGKTTIVNLLMRF 404 >5VHD-D nrPDB Length = 870 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 17/24 (70%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVE 37 V+ G+ G GK++ V +F+ D ++E Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >2MHH-A nrPDB Length = 96 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%) Query: 103 KWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQEN 145 +W QEL+ +G+ + + K D+ R + AE+ A + Sbjct: 39 EWRQELKCRGHADADIEAVFAKYDVDGDRVLDAEEQMKMAHDL 81 >1WDT-A nrPDB Length = 665 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQ 34 M G ++ + L+G G+GK++L + Sbjct: 1 MGTEGG-AMIRTVALVGHAGSGKTTLTEALLYKT 33 >4YPN-A nrPDB Length = 293 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/14 (64%), Positives = 11/14 (78%) Query: 13 LVLLGDVGAGKSSL 26 LVL+G G GK+SL Sbjct: 146 LVLVGPPGVGKTSL 159 >4YPL-A nrPDB Length = 555 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/14 (64%), Positives = 11/14 (78%) Query: 13 LVLLGDVGAGKSSL 26 LVL+G G GK+SL Sbjct: 113 LVLVGPPGVGKTSL 126 >2I3B-A nrPDB Length = 189 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 3/51 (5%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 + L G G GK++L+ + + G F+++ + + F++ Sbjct: 4 VFLTGPPGVGKTTLIHK-ASEVLKSSGVPVDG--FYTEEVRQGGRRIGFDV 51 >3LLM-A nrPDB Length = 235 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 17/26 (65%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEF 38 +++ G G GK++ V +F+ D F++ Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >2GZA-A nrPDB Length = 361 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 20/33 (60%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGA 45 +V+ G+ G+GK++L+ +++ + + TI Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLITIED 210 >5NKM-B nrPDB Length = 317 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 1/50 (2%) Query: 16 LGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF-FSQTLAVNDATVKFEIW 64 +G GAGKS+L+ + + + T++ +I+ Sbjct: 34 IGPQGAGKSTLLSMLAGNNSRQMYREYVFRPVSREANEQSRHQTIQIDIY 83 >2QAG-B nrPDB Length = 427 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQ--ESTIGAAFFSQTLAVNDATVKFEI 63 ++ +G+ G GKS+L+ +F + G S T + ++ V+ ++ Sbjct: 43 FNILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKL 97 >4MKI-B nrPDB Length = 298 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTI-GAAFFSQTLAVNDATVKFEI 63 + ++G G+GKS+L+ + + I G + +++ D + + Sbjct: 40 VGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQVGL 91 >3FVQ-A nrPDB Length = 359 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 11/20 (55%) Query: 13 LVLLGDVGAGKSSLVLRFVK 32 L ++G G GK++L+ Sbjct: 33 LFIIGASGCGKTTLLRCLAG 52 >6HCM-k1 nrPDB Length = 599 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEF--QESTIGAAFFSQTLA 53 +V+LG+ G GK++ + + + + ++ Q ++ Sbjct: 375 MVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKIS 417 >4O0M-A nrPDB Length = 524 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF 47 ++ G G GK+ ++F+ + F E I F Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTF 77 >4F4J-A nrPDB Length = 202 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFS-QTLAVNDATVKF 61 S++ +V+ G G GKS+L+ + ++ + ++ + + + VN F Sbjct: 13 QGSMSRPIVISGPSGTGKSTLLKKLFA-EYPDSFGFSVPSTTRTPRAGEVNGKDYNF 68 >2PJZ-A nrPDB Length = 263 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 14/16 (87%) Query: 12 KLVLLGDVGAGKSSLV 27 K+++LG G+GK++L+ Sbjct: 32 KVIILGPNGSGKTTLL 47 >1Z6G-A nrPDB Length = 218 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQ 39 + G+ + LV+ G G GK +L+ + + ++F + Sbjct: 14 LVPRGSMNNIYPLVICGPSGVGKGTLIKKLL-NEFPNYF 51 >4HSE-A nrPDB Length = 397 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 14 VLLGDVGAGKSS----LVLRFVKDQFVE 37 VL+G+ G GK++ L R VK E Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >6ED3-A nrPDB Length = 848 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 12/14 (85%) Query: 14 VLLGDVGAGKSSLV 27 VL+G+ G GK+++V Sbjct: 203 VLIGEPGVGKTAIV 216 >3DEF-A nrPDB Length = 262 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFV 36 +++LG G GKSS V + +Q V Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQVV 62 >2P65-A nrPDB Length = 187 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 12/14 (85%) Query: 14 VLLGDVGAGKSSLV 27 +LLGD G GK+++V Sbjct: 47 ILLGDPGVGKTAIV 60 >6N0I-A nrPDB Length = 706 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 4/69 (5%) Query: 58 TVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMV 117 +F I DT G + R A++VF + + W Q + Sbjct: 85 KYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQSETVWRQANKYHVPRLAY 144 Query: 118 MALAGNKSD 126 + NK D Sbjct: 145 I----NKMD 149 >3ZJC-A nrPDB Length = 305 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 34/96 (35%), Gaps = 13/96 (13%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 ++ + ++VL+G G+GKS+ + ++ + + + Q + + D Sbjct: 9 SEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVD 68 Query: 66 TAGQ------------ERYHSLAPMYYRGAAAAIIV 89 T G E + G A ++V Sbjct: 69 TPGLFDTKESLDTTCKEISRCIISSC-PGPHAIVLV 103 >4Q7L-A nrPDB Length = 256 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 16/22 (72%), Gaps = 3/22 (13%) Query: 12 KLVLLGDVGAGKSS---LVLRF 30 K+ L+G G+GK++ L++RF Sbjct: 33 KVALVGPTGSGKTTIVNLLMRF 54 >3VX4-A nrPDB Length = 273 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 12/17 (70%) Query: 12 KLVLLGDVGAGKSSLVL 28 K+ L+G G+GK++L Sbjct: 63 KVSLVGASGSGKTTLAK 79 >6C2V-A nrPDB Length = 115 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 13 LVLLGDVGAGKSSL--VLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 +V++G GAGK++L + R K++ + + T+ ++ +A +I Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTVTTKEDAKRVAEEAERRNADI 57 Score = 26.3 bits (57), Expect = 9.2, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQ 50 +V++G G+GKS+L + VK TI + Sbjct: 58 VVIVGPSGSGKSTLA-KIVKKIIARAGAKTIEVTTEEE 94 >5IFK-A nrPDB Length = 312 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 4/43 (9%) Query: 129 DARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 171 D V ++ + +E +E SAK + +V+E+ + + + Sbjct: 268 DENPVPIQEGKATHEEV----LENSAKASKDVQELIFSVVAEI 306 >2NQL-A nrPDB Length = 388 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 12/26 (46%) Query: 61 FEIWDTAGQERYHSLAPMYYRGAAAA 86 +WD AGQE S+ + G + Sbjct: 128 IALWDIAGQEAGKSIRDLLGGGVDSF 153 >4MRS-A nrPDB Length = 614 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 3/22 (13%) Query: 12 KLVLLGDVGAGKSS---LVLRF 30 ++ ++G GAGKS+ L+ RF Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF 410 >5JWO-A nrPDB Length = 247 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%) Query: 14 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF 47 ++ G G GK+ ++F+ + F E I F Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTF 69 >2CE7-A nrPDB Length = 476 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60 ++L+G G GK+ L+ R V + G+ F + V A V+ Sbjct: 52 ILLVGPPGTGKT-LLARAVAGEANVPFFHISGSDFVELFVGVGAARVR 98 >5TV2-A nrPDB Length = 405 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 4/77 (5%) Query: 50 QTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQ 109 + + + I DT G + R A++VF ++ + W Q + Sbjct: 73 RGMEAQFQDHRVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADK 132 Query: 110 AQGNPNMVMALAGNKSD 126 + + NK D Sbjct: 133 YH----VPRMVFVNKMD 145 >5JSZ-B nrPDB Length = 287 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 8/51 (15%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQEST---IGAAFFSQTLAVNDATVK 60 + L+G G+GKS+L+ F + T I A ++ T + +K Sbjct: 36 IALVGHTGSGKSTLMQ-----HFNALLKPTSGKIEIAGYTITPETGNKGLK 81 >6D00-1 nrPDB Length = 883 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 14 VLLGDVGAGKSS----LVLRFVKDQFVEF 38 L+G+ G GK++ L R VK Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >4WZ6-A nrPDB Length = 290 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 6/44 (13%) Query: 1 MAAAGNKSINAKL------VLLGDVGAGKSSLVLRFVKDQFVEF 38 + K IN K+ + G GAGK+SL++ + + Sbjct: 49 LGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSE 92 >2D62-A nrPDB Length = 375 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 5/43 (11%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVN 55 LVLLG G GK++ + + E T G + L + Sbjct: 35 LVLLGPSGCGKTTTLRMIAGLE-----EPTRGQIYIEDNLVAD 72 >5EUF-A nrPDB Length = 419 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 71 RYHSLAPMYYRGAAAAIIVF-DVTNQASFERAKKWVQELQAQGNPNMV 117 +YY+ A ++V DV +Q FE KK + L+ + Sbjct: 178 DIKKFHSLYYQPKNAIVLVVGDVNSQKVFELTKKHFESLKNLDEKAIP 225 >6BZR-B nrPDB Length = 251 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 12 KLVLLGDVGAGKSSLV 27 K+ ++G GAGKSSL Sbjct: 42 KVGIVGRTGAGKSSLA 57 >5GM6-Y nrPDB Length = 876 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 13 LVLLGDVGAGKSSLVLRF-VKDQFVEFQESTIGAAFFSQT 51 L+++G+ G+GK++ + ++ V+D F + + I + Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRV 281 >5B57-C nrPDB Length = 273 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 10/19 (52%), Positives = 12/19 (63%) Query: 14 VLLGDVGAGKSSLVLRFVK 32 LLG GAGKS+L+ F Sbjct: 31 ALLGRNGAGKSTLLKTFAG 49 >4FIN-A nrPDB Length = 555 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 13/16 (81%) Query: 12 KLVLLGDVGAGKSSLV 27 K+ +LG GAGKS+L+ Sbjct: 34 KIGVLGLNGAGKSTLL 49 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 18/40 (45%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTL 52 + ++G GAGKS+L + + T+G ++ Sbjct: 352 VGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASV 391 >2OCP-A nrPDB Length = 241 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 11 AKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF 47 +L + G++ GKS+ V + + + E+ +T A Sbjct: 3 RRLSIEGNIAVGKSTFV-KLLTKTYPEWHVATEPVAT 38 >5NIK-J nrPDB Length = 654 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 13 LVLLGDVGAGKSSLVLRF 30 + ++G G+GKS+L+ Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >5LJA-A nrPDB Length = 231 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 13 LVLLGDVGAGKSSLVLRF 30 + ++G G+GKS+L+ Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >3D0O-A nrPDB Length = 317 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 11/60 (18%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65 NK K+VL+G+ G SS V V+ + ++ V+ ++ D Sbjct: 2 NKFKGNKVVLIGNGAVG-SSYAFSLVNQSIVDELV----------IIDLDTEKVRGDVMD 50 >6FA9-A nrPDB Length = 655 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 16/20 (80%) Query: 13 LVLLGDVGAGKSSLVLRFVK 32 L+L+G+ G+GK++ + +++ Sbjct: 50 LILVGETGSGKTTQIPQYLH 69 >3PV0-A nrPDB Length = 381 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGA 45 +V +G G GKS+L+ + + + IG Sbjct: 32 VVFVGPSGCGKSTLLRMIAGLETITSGDLFIGE 64 >3JVU-A nrPDB Length = 356 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 58/184 (31%), Gaps = 53/184 (28%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQES--TIGA--AFF--SQTLAVNDATVKFEIWDT 66 +++ G G+GKS+ + + TI F S+ VN V DT Sbjct: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH---RDT 182 Query: 67 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSD 126 G F A L++ + + L G D Sbjct: 183 LG-----------------------------FSEA------LRSALREDPDIILVGEMRD 207 Query: 127 LLDARKVTAEDAQTYAQENGLFF---METS-AKTATNVKEIFYEIARRLPRVQPTENPTG 182 L R A T A+ L F TS AKT V ++F + + R +E+ Sbjct: 208 LETIR-----LALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQS 262 Query: 183 MVLP 186 ++ Sbjct: 263 VISQ 266 >4OI0-A nrPDB Length = 431 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 1/67 (1%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQEST-IGAAFFSQTLAVNDATVK 60 A NK+ +L+L+G GK+++ + + + +++V Sbjct: 109 AGNSNKAKGPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELDVGQNSVSVPGTVAA 168 Query: 61 FEIWDTA 67 + TA Sbjct: 169 VLVQKTA 175 >1IHU-A nrPDB Length = 589 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Query: 13 LVLLGDVGAGKSS----LVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63 ++L+G G GK++ + +R F ++ AA S + +N + ++ Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHLS--MTLNGSLNNLQV 382 >4YDS-A nrPDB Length = 228 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Query: 5 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQEST-IGAAFFSQTLAVNDATVKFEI 63 G A +++ GD G GKS L +FV + ++ I ++ + +K ++ Sbjct: 15 GGIPYPASIMIEGDHGTGKSVLSAQFVLGFLLSDKKGYVITTEQTTKDYLIKMKEIKIDL 74 >5GKO-A nrPDB Length = 671 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 13 LVLLGDVGAGKSSLVLRF 30 + ++G G+GKS+L+ Sbjct: 46 VAIVGQSGSGKSTLMNIL 63 >2A30-A nrPDB Length = 248 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 17/41 (41%) Query: 2 AAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQEST 42 +A+ + K+ + G++ AGKS+ V + Sbjct: 16 SASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPE 56 >6G2G-A nrPDB Length = 310 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 13 LVLLGDVGAGKSSLVLRFV 31 LVL G G GKSS+ + Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >4XD7-D nrPDB Length = 483 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 12 KLVLLGDVGAGKSSLVLRFVKD 33 K+ L G G GK+ L+ + + Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184 >5D0U-A nrPDB Length = 714 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQEST 42 LV +G+ G+GK++ + ++V + E T Sbjct: 57 LVFVGETGSGKTTQIPQYVL--YDELPHQT 84 >4A9A-A nrPDB Length = 376 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 18/56 (32%), Gaps = 2/56 (3%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 + +G GKS+L+ + + + + K ++ D G Sbjct: 75 VGFVGFPSVGKSTLLSKLTGTE--SEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPG 128 >6BK7-A nrPDB Length = 407 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 35/122 (28%), Gaps = 20/122 (16%) Query: 21 AGKSSLVLR--FVKDQFVE--------------FQESTIGAAFFSQTLAVNDATVKFEIW 64 AGK++ R + + + QE G S + I Sbjct: 24 AGKTTTTERILYYTGKIHKIGETHEGASQMDWMEQEQERGITITSAATTAQWKGYRVNII 83 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DT G + R A+ V D + + W Q + + + + NK Sbjct: 84 DTPGHVDFTIEVQRSLRVLDGAVTVLDSQSGVEPQTETVWRQATEYK----VPRIVFCNK 139 Query: 125 SD 126 D Sbjct: 140 MD 141 >3VAA-A nrPDB Length = 199 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 10/51 (19%) Query: 10 NAKLVLLGDVGAGKSSLVLRFVKD----------QFVEFQESTIGAAFFSQ 50 ++ L G +GAGK++L F + E T+G F + Sbjct: 25 MVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTER 75 >4XGC-E nrPDB Length = 460 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 81/253 (32%), Gaps = 63/253 (24%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQEST---IGAAFFSQTLAVN-- 55 + +++ + + L G G GK++L F+K+ T ++ + + Sbjct: 25 LIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEIL 84 Query: 56 --------DATVKFE-IWDTAGQERYHSLAPMYYRGAAAAIIVFD----VTNQASFERAK 102 +K + + D Q R + + +I D + + Sbjct: 85 LDSLAPDQGDALKVDNMLDFVEQLRRQAATRV---EDQGFLIAVDNAERLRDMD--ANVL 139 Query: 103 KWVQELQAQGNPNMVMALAG--------NKSDL---------------------LDARKV 133 + LQ N N+ + L NK+ L D ++V Sbjct: 140 PVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQV 199 Query: 134 TAEDAQTYAQENGLFFMETS--AKTAT------NVK-EIFYEIARRLPRVQPTENPTGMV 184 + + +AQ+ +E A T N+ +FY+ R +P +Q T Sbjct: 200 RNQLLEQFAQDK--KRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLST 257 Query: 185 LPDRAMDRAVSSS 197 + +D V ++ Sbjct: 258 YLEPVLDGTVDAT 270 >1LV7-A nrPDB Length = 257 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTI-GAAFFSQTLAVNDATVK 60 ++++G G GK+ L + V F TI G+ F + V + V+ Sbjct: 48 VLMVGPPGTGKTLLAKAIAGEAKVPFF--TISGSDFVEMFVGVGASRVR 94 >1E94-E nrPDB Length = 449 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 12/20 (60%) Query: 13 LVLLGDVGAGKSSLVLRFVK 32 ++++G G GK+ + R K Sbjct: 59 ILMIGPTGVGKTEIARRLAK 78 >1IM2-A nrPDB Length = 444 Score = 27.5 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 12/20 (60%) Query: 13 LVLLGDVGAGKSSLVLRFVK 32 ++++G G GK+ + R K Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >6FT6-s nrPDB Length = 520 Score = 27.5 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 7/60 (11%) Query: 13 LVLLGDVGAGKSS----LVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 68 + ++G GKSS L+ R + G + + +++ K +I D+ G Sbjct: 283 VGVIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTTSLREIKIDN---KLKILDSPG 339 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 29/94 (30%), Gaps = 10/94 (10%) Query: 41 STIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMY-------YRGAAAAIIVFDVT 93 + A L V D + F D G+ Y + + V D Sbjct: 127 PSNDADVRDDELDVIDYNIDFYGEDVEGESELEKSRKAYDKIFKSVIDASDVILYVLDAR 186 Query: 94 NQASFERAKKWVQELQAQGNPNMVMALAGNKSDL 127 + S K LQ+QG + L NK DL Sbjct: 187 DPESTRSRKVEEAVLQSQGKR---LILILNKVDL 217 >2PCL-A nrPDB Length = 224 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 13 LVLLGDVGAGKSSLVLRF 30 + ++G G+GKS+L+ Sbjct: 33 VSIIGASGSGKSTLLYIL 50 >6FKI-F nrPDB Length = 498 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%) Query: 12 KLVLLGDVGAGKSSLVLRFVKD 33 K+ L G G GK+ L++ + + Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188 >5CDF-E nrPDB Length = 474 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%) Query: 12 KLVLLGDVGAGKSSLVLRFVKD 33 K+ L G G GK+ L++ + + Sbjct: 146 KIGLFGGAGVGKTVLIMELINN 167 >2XND-D nrPDB Length = 467 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%) Query: 12 KLVLLGDVGAGKSSLVLRFVKD 33 K+ L G G GK+ L++ + + Sbjct: 143 KIGLFGGAGVGKTVLIMELINN 164 >2W6I-D nrPDB Length = 528 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%) Query: 12 KLVLLGDVGAGKSSLVLRFVKD 33 K+ L G G GK+ L++ + + Sbjct: 201 KIGLFGGAGVGKTVLIMELINN 222 >2W6D-A nrPDB Length = 695 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVK 32 +A+ + +L++LGD+ GKS+ + + Sbjct: 60 IASKNLQQGVFRLLVLGDMKRGKSTFLNALIG 91 >4V7D-BZ nrPDB Length = 711 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 12/35 (34%) Query: 56 DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVF 90 + I DT G + R A++V+ Sbjct: 78 YEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVY 112 >2NPI-A nrPDB Length = 460 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 11/68 (16%) Query: 12 KLVLLGDVGAGKSSLVLRFVK--DQFVEFQESTIGAAFFSQTLAVND----ATVKFEIWD 65 ++V++G GK+SL +F +Q I V + +I D Sbjct: 140 RVVIVGGSQTGKTSLSRTLCSYALKFNAYQPLYINLDPQQPIFTVPGCISATPIS-DILD 198 Query: 66 ----TAGQ 69 T GQ Sbjct: 199 AQLPTWGQ 206 >6QUZ-A nrPDB Length = 587 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 13/16 (81%) Query: 13 LVLLGDVGAGKSSLVL 28 + +LG+ G+GKS+L+ Sbjct: 372 VAVLGETGSGKSTLMN 387 >5Z1X-A nrPDB Length = 495 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 60 KFEIWDTAGQERYHS-LAPMYYRGAAAAIIVFDVTNQ 95 F++ D AG YHS L+ Y G A +V+D T+ Sbjct: 96 NFQVPDQAGTYWYHSHLSTQYCDGLRGAFVVYDPTDP 132 >5LL6-h nrPDB Length = 608 Score = 27.5 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 13/20 (65%) Query: 13 LVLLGDVGAGKSSLVLRFVK 32 LV++G+ G GK++L+ Sbjct: 381 LVMMGENGTGKTTLIKLLAG 400 >5IK2-D nrPDB Length = 462 Score = 27.1 bits (59), Expect = 4.6, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 12 KLVLLGDVGAGKSSLVLRFVKD 33 K+ L G G GK+ L+ + + Sbjct: 146 KIGLFGGAGVGKTVLIQELINN 167 >6J9S-A nrPDB Length = 326 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%) Query: 1 MAAAGNKSINAKLVLLGDVGAGKS 24 MA+ +K K++L+GD G S Sbjct: 1 MASITDKDHQ-KVILVGDGAVGSS 23 >1EZ4-A nrPDB Length = 318 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Query: 12 KLVLLGDVGAGKS---SLVLRFVKDQFV 36 K+VL+GD G S ++ + + ++FV Sbjct: 7 KVVLVGDGAVGSSYAFAMAQQGIAEEFV 34 >4ZIR-B nrPDB Length = 268 Score = 27.1 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 12/19 (63%) Query: 14 VLLGDVGAGKSSLVLRFVK 32 V++G G+GK++L+ Sbjct: 41 VVVGKNGSGKTTLLKILAG 59 >4Q7K-A nrPDB Length = 250 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 13/16 (81%) Query: 13 LVLLGDVGAGKSSLVL 28 + +LG+ G+GKS+L+ Sbjct: 34 VAVLGETGSGKSTLMN 49 >4G1U-C nrPDB Length = 266 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQ 39 + ++G GAGKS+L+ R + Sbjct: 40 VAIIGPNGAGKSTLL-RLLTGYLSPSH 65 >4LN1-A nrPDB Length = 336 Score = 27.1 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 3/36 (8%) Query: 4 AGNKSINAKLVLLGDVGAGKS---SLVLRFVKDQFV 36 K ++VL+G G S ++ + V ++FV Sbjct: 21 QSMKKGINRVVLVGTGAVGCSYAYCMINQAVAEEFV 56 >3CNO-A nrPDB Length = 262 Score = 27.1 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 5/29 (17%), Positives = 16/29 (55%) Query: 6 NKSINAKLVLLGDVGAGKSSLVLRFVKDQ 34 + A+++++G GKS+++ + + Sbjct: 95 SFDRLARVLIVGVPNTGKSTIINKLKGKR 123 >5CA8-A nrPDB Length = 692 Score = 26.7 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 11/24 (45%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFV 36 + + G GKS+L+ R F Sbjct: 61 ISVFGSQSTGKSTLLNRLFNTNFD 84 >5VH6-A nrPDB Length = 409 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 35/122 (28%), Gaps = 20/122 (16%) Query: 21 AGKSSLVLR--FVKDQFVE--------------FQESTIGAAFFSQTLAVNDATVKFEIW 64 AGK++ R F + + QE G S + I Sbjct: 24 AGKTTTTERILFYTGRIHKIGETHEGASQMDWMEQEQERGITITSAATTAQWKGYRVNII 83 Query: 65 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNK 124 DT G + R A+ V D + + W Q G P +V NK Sbjct: 84 DTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQ-ATTYGVPRIVFV---NK 139 Query: 125 SD 126 D Sbjct: 140 MD 141 >4ZPR-B nrPDB Length = 345 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 16/40 (40%) Query: 123 NKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 162 D+ +VT + A+ G ++ET A N K Sbjct: 278 THHDMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKN 317 >6O9M-2 nrPDB Length = 462 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 131 RKVTAEDAQTYAQENGLFFMETSAK 155 +V E +A+E G+ E SAK Sbjct: 414 SQVDFELLLAHARELGVLVFENSAK 438 >5OF4-D nrPDB Length = 85 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 131 RKVTAEDAQTYAQENGLFFMETSAK 155 +V E +A+E G+ E SAK Sbjct: 37 SQVDFELLLAHARELGVLVFENSAK 61 >2PX0-A nrPDB Length = 296 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTL 52 +VL G GAGK++ + + +E + + + Sbjct: 108 IVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRI 147 >1EFM-A nrPDB Length = 379 Score = 26.7 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 34/110 (30%), Gaps = 11/110 (10%) Query: 22 GKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYR 81 GK++L + + G + + + T + D G Y Sbjct: 23 GKTTLTAAITTVLAKTYGGAARGITINTSHVEYDTPTRHYAHVDCPGHADY---VKNMIT 79 Query: 82 GA---AAAIIVFDVTNQASFERAKKWVQELQAQGNPNMV-MALAGNKSDL 127 GA AI+V T+ + + + + + + NK D+ Sbjct: 80 GAAQMDGAILVVAATD----GPMPQTREHILLGRQVGVPYIIVFLNKCDM 125 >6F5D-D nrPDB Length = 498 Score = 26.3 bits (57), Expect = 7.8, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 13/22 (59%) Query: 12 KLVLLGDVGAGKSSLVLRFVKD 33 K+ L G G GK+ +++ + + Sbjct: 157 KIGLFGGAGVGKTVIIMELINN 178 >1MJ1-A nrPDB Length = 405 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 9/52 (17%) Query: 84 AAAIIVFDVTN---QASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARK 132 AI+V + + + E L A+ + + NK D++D R+ Sbjct: 100 DGAILVVSAADGRMRQTREHI------LLARQVGVRYIVVFMNKVDMVDDRE 145 >6CY1-A nrPDB Length = 329 Score = 26.3 bits (57), Expect = 9.6, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Query: 13 LVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 64 ++++G G GK++ + + E + +GAA + AV+ + IW Sbjct: 126 IMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVD----QLVIW 173 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.157 0.460 Lambda K H 0.267 0.0482 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,127,616 Number of Sequences: 36641 Number of extensions: 339447 Number of successful extensions: 2751 Number of sequences better than 10.0: 478 Number of HSP's better than 10.0 without gapping: 517 Number of HSP's successfully gapped in prelim test: 149 Number of HSP's that attempted gapping in prelim test: 1633 Number of HSP's gapped (non-prelim): 742 length of query: 200 length of database: 10,336,785 effective HSP length: 92 effective length of query: 108 effective length of database: 6,965,813 effective search space: 752307804 effective search space used: 752307804 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 57 (26.3 bits)