BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9SL42 (119 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1J6Y-A nrPDB 242 3e-65 1YW5-A nrPDB 125 5e-30 3JYJ-A nrPDB 120 1e-28 4TNS-A nrPDB 120 1e-28 1ZCN-A nrPDB 120 1e-28 4U85-A nrPDB 120 1e-28 2LJ4-A nrPDB 109 3e-25 2M1I-A nrPDB 71 1e-13 4WO7-A nrPDB 67 2e-12 2M08-A nrPDB 64 1e-11 1ZK6-A nrPDB 62 5e-11 2JZV-A nrPDB 60 2e-10 2MNT-A nrPDB 60 3e-10 1JNS-A nrPDB 55 8e-09 3RFW-A nrPDB 49 4e-07 1FJD-A nrPDB 48 9e-07 6BHF-A nrPDB 47 2e-06 5EZ1-A nrPDB 47 2e-06 5HTF-A nrPDB 45 8e-06 4G2P-A nrPDB 41 1e-04 1M5Y-A nrPDB 40 2e-04 2J5B-A nrPDB 28 1.0 2PV2-A nrPDB 27 1.6 2PV3-A nrPDB 27 2.4 6GY8-A nrPDB 27 2.6 2A8A-A nrPDB 25 5.0 2HK1-A nrPDB 25 8.8 >1J6Y-A nrPDB Length = 139 Score = 242 bits (617), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 60 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE Sbjct: 21 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 80 Query: 61 EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA Sbjct: 81 EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 139 >1YW5-A nrPDB Length = 177 Score = 125 bits (313), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 58/114 (50%), Positives = 82/114 (71%), Gaps = 3/114 (2%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 QV+ SH+LIK+ SR+ SWK P+G ++ TR+ +++ LK E I+SG+ E+A Sbjct: 67 QVRVSHLLIKNNQSRKPKSWKSPDG---ISRTRDESIQILKKHLERILSGEVKLSELANT 123 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 SDCSS RGGDLG F +GQMQ PFEEA + L VG++S+I++T+SGVHI++RT Sbjct: 124 ESDCSSHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRTG 177 >3JYJ-A nrPDB Length = 123 Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 14 RVRCSHLLVKHSQSRRPSSWRQEQ----ITRTQEEALELINGYIQKIKSGEEDFESLASQ 69 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 70 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 122 >4TNS-A nrPDB Length = 151 Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 42 RVRCSHLLVKHSQSRRPSSWRQEQ----ITRTQEEALELINGYIQKIKSGEEDFESLASQ 97 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 98 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 150 >1ZCN-A nrPDB Length = 161 Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 52 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 107 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 108 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 160 >4U85-A nrPDB Length = 181 Score = 120 bits (301), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 72 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 127 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 128 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 180 >2LJ4-A nrPDB Length = 115 Score = 109 bits (272), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 2/115 (1%) Query: 5 DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVAT 64 ++++A+H+L+K GSR S + G T E A+++L+ + I SG+ +FEE A+ Sbjct: 3 EKLRAAHLLVKFSGSRNPVSRR--TGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAAS 60 Query: 65 RVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 + SDC S GGDLG F G+M KPFE+A ALK+GDIS IV TDSG+HIIKR A Sbjct: 61 QRSDCGSYASGGDLGFFSSGEMMKPFEDAVRALKIGDISPIVQTDSGLHIIKRLA 115 >2M1I-A nrPDB Length = 97 Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 27/116 (23%) Query: 5 DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVAT 64 D++K SHIL+K QG E L +++E + +G+ F ++A Sbjct: 8 DKIKCSHILVKKQG------------------------EAL-AVQERLKAGE-KFGKLAK 41 Query: 65 RVS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 +S D SAKR G LG FGRG+M KPFE+A + L+VG++S+ V ++ G H+IKR Sbjct: 42 ELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKSEFGYHVIKRLG 97 >4WO7-A nrPDB Length = 263 Score = 66.6 bits (161), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 17/122 (13%) Query: 2 ASRDQVKASHILIKHQGSRRKASWKDPEGKI----ILTTTREAAVEQLKSIREDIVSGKA 57 A++D +K + IK W+ +GKI IL ++ A E K +++ Sbjct: 97 AAKDNIKVTDADIKE-------YWEGLKGKIRASHILVADKKTAEEVEKKLKKG-----E 144 Query: 58 NFEEVATRVSDCSSAKRGGDLGSFGR-GQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 FE++A S SSA +GGDLG F + GQM + F +A + LK G++SD V T G HIIK Sbjct: 145 KFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIK 204 Query: 117 RT 118 +T Sbjct: 205 KT 206 >2M08-A nrPDB Length = 93 Score = 63.9 bits (154), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 10/95 (10%) Query: 28 PEGKI----ILTTTREAAVEQLKSIREDIVSGKANFEEVATRVS-DCSSAKRGGDLGSFG 82 P KI IL + + A+ +I E + SG+ F ++A +S D SAK+ G+LG F Sbjct: 2 PSNKIKCSHILVSKQSEAL----AIMEKLKSGE-KFGKLAKELSIDSGSAKKNGNLGYFT 56 Query: 83 RGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKR 117 +G M KPFE+A + L+VG++S+ + ++ G HIIKR Sbjct: 57 KGMMVKPFEDAAFKLQVGEVSEPIKSEFGYHIIKR 91 >1ZK6-A nrPDB Length = 93 Score = 62.4 bits (150), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Query: 58 NFEEVATRVSDCSSAKRGGDLGSFGR-GQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 FE++A S SSA +GGDLG F + GQM + F +A + LK G++SD V T G HIIK Sbjct: 30 KFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIK 89 Query: 117 RT 118 +T Sbjct: 90 KT 91 >2JZV-A nrPDB Length = 111 Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 11/113 (9%) Query: 5 DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVAT 64 D KASHILIK K+ D EG + A ++ + I++++ + F E+A Sbjct: 6 DSKKASHILIK-----VKSKKSDKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAK 55 Query: 65 RVS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 + S D SAK+ G+LG +GQ K FE+A + LK G++S++V + G HIIK Sbjct: 56 KESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHIIK 108 >2MNT-A nrPDB Length = 120 Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 4/111 (3%) Query: 11 HILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSI----REDIVSGKANFEEVATRV 66 H+L+KH+ RR +S +T +R A+ ++I +E F +V Sbjct: 8 HVLVKHKDVRRPSSLAPRNKGEKITRSRADAINLAQAILAQHKERKTWSLDEFVQVVRDF 67 Query: 67 SDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKR 117 S+C SAKR GDLG G + F+ ++LK G++S V+T+ GVH+I R Sbjct: 68 SECGSAKRDGDLGMVESGTYTEGFDTVAFSLKSGEVSAPVETELGVHLIYR 118 >1JNS-A nrPDB Length = 92 Score = 54.7 bits (130), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Query: 33 ILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEE 92 IL + A++ L+ I+ A+F ++A + S C S KRGGDLG F +GQM F++ Sbjct: 9 ILVKEEKLALDLLEQIKNG-----ADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDK 63 Query: 93 ATYALKVGDISDIVDTDSGVHIIK 116 ++ V + + + T G HIIK Sbjct: 64 VVFSCPVLEPTGPLHTQFGYHIIK 87 >3RFW-A nrPDB Length = 252 Score = 48.9 bits (115), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 12/91 (13%) Query: 32 IILTTTREAA--VEQLKSIREDIVSGK---ANFEEVATRVS-DCSSAKRGGDLGSFGRGQ 85 I++ T +EA + +LK ++ GK A F E+A S D S +GG+LG F + Sbjct: 118 ILVATEKEAKDIINELKGLK-----GKELDAKFSELAKEKSIDPGSKNQGGELGWFDQST 172 Query: 86 MQKPFEEATYALKVGDISDI-VDTDSGVHII 115 M KPF +A +ALK G I+ V T+ G H+I Sbjct: 173 MVKPFTDAAFALKNGTITTTPVKTNFGYHVI 203 >1FJD-A nrPDB Length = 104 Score = 48.1 bits (113), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 15/81 (18%) Query: 41 AVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVG 100 A+E+LKS F EVA + S+ A++GGDLG RG M PF+EA +AL V Sbjct: 27 AMEKLKS--------GMRFNEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPVS 77 Query: 101 DISDIVDTDS------GVHII 115 + V TD G HII Sbjct: 78 GMDKPVFTDPPVKTKFGYHII 98 >6BHF-A nrPDB Length = 299 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%) Query: 57 ANFEEVATRVS---DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDI-VDTDSGV 112 A F E+A R + + +A+ GGDLG F + QM F +A +AL GD + V T+ G Sbjct: 187 AKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGY 246 Query: 113 HII 115 HII Sbjct: 247 HII 249 >5EZ1-A nrPDB Length = 277 Score = 46.6 bits (109), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%) Query: 57 ANFEEVATRVS---DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDI-VDTDSGV 112 A F E+A R + + +A+ GGDLG F + QM F +A +AL GD + V T+ G Sbjct: 157 AKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGY 216 Query: 113 HII 115 HII Sbjct: 217 HII 219 >5HTF-A nrPDB Length = 283 Score = 45.1 bits (105), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 9/103 (8%) Query: 19 SRRKASWKDPEGKIILTTTREAAVEQ---LKSIREDIVSGKANFEEVATRVS-DCSSAKR 74 S+ KA +K E I T R V+ K I+ + +G+ F ++A S D +++ Sbjct: 106 SKLKAYYKTWEPDI---TVRHILVDDEATAKEIQTKLKNGE-KFTDLAKEYSTDTATSTN 161 Query: 75 GGDLGSFGRGQMQKPFEEATYALKV-GDISDIVDTDSGVHIIK 116 GG L FG G+M + FE+A YAL+ D+S IV + G H+I+ Sbjct: 162 GGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQ 204 >4G2P-A nrPDB Length = 110 Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 44 QLKSIREDIVSGKANFEEVATRVS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDI 102 +L+ I DI SGK F A S D SA +GGDLG F +A L G I Sbjct: 30 KLEEIAADIKSGKTTFAAAAKEYSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQI 89 Query: 103 SDIVDTDSGVHIIK 116 S V + G H+I+ Sbjct: 90 SAPVHSSFGWHLIE 103 >1M5Y-A nrPDB Length = 408 Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 17/112 (15%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V A HIL+K P T E A +L+ I DI SGK F A Sbjct: 264 EVHARHILLK----------PSP------IMTDEQARVKLEQIAADIKSGKTTFAAAAKE 307 Query: 66 VS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 S D SA +GGDLG F +A L G +S V + G H+I+ Sbjct: 308 FSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIE 359 Score = 26.9 bits (58), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 57 ANFEEVATRVSDCSSAKRGGDLGSFGRGQ-MQKPFEEATYALKVGDISDIVDTDSGVHII 115 A+F ++A S A GG +G +GR Q + F +A K GDI + + G HI+ Sbjct: 190 ADFGKLAIAHSADQQALNGGQMG-WGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHIL 248 Query: 116 K 116 K Sbjct: 249 K 249 >2J5B-A nrPDB Length = 348 Score = 27.7 bits (60), Expect = 1.0, Method: Compositional matrix adjust. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 11 HILIKHQGSRRKASWKDPEGKIILTTTREAAVEQL 45 H+L+ G ++K S DP+G I + T + E++ Sbjct: 221 HMLMSLSGPKKKMSKSDPQGAIFMDDTEQEVSEKI 255 >2PV2-A nrPDB Length = 103 Score = 27.3 bits (59), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 57 ANFEEVATRVSDCSSAKRGGDLGSFGRGQ-MQKPFEEATYALKVGDISDIVDTDSGVHII 115 A+F ++A S A GG +G +GR Q + F +A K GDI + + G HI+ Sbjct: 39 ADFGKLAIAHSADQQALNGGQMG-WGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHIL 97 Query: 116 K 116 K Sbjct: 98 K 98 >2PV3-A nrPDB Length = 299 Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 57 ANFEEVATRVSDCSSAKRGGDLGSFGRGQ-MQKPFEEATYALKVGDISDIVDTDSGVHII 115 A+F ++A S A GG +G +GR Q + F +A K GDI + + G HI+ Sbjct: 190 ADFGKLAIAHSADQQALNGGQMG-WGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHIL 248 Query: 116 K 116 K Sbjct: 249 K 249 >6GY8-A nrPDB Length = 408 Score = 26.6 bits (57), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%) Query: 38 REAAVEQ---LKSIREDIVSGKANFEEVATRVSDCSSAKRGGDL--GSFGRG 84 +E AVE L+S+++DI + N ++V T VSD GG+L G+ +G Sbjct: 164 KEIAVELGNILESMKKDIKRQQENTQKVKTAVSDFKLKLIGGELSDGTIAQG 215 >2A8A-A nrPDB Length = 439 Score = 25.4 bits (54), Expect = 5.0, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 18/25 (72%) Query: 57 ANFEEVATRVSDCSSAKRGGDLGSF 81 AN+E++ATR+S+ +SA D+ + Sbjct: 292 ANYEKIATRLSEVNSAPPEYDINEY 316 >2HK1-A nrPDB Length = 309 Score = 24.6 bits (52), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 54 SGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEA-TYALKVGDISDIVD--TDS 110 +GKA FE + V+ GG L S+ +P ++A YA V I+ I D D Sbjct: 104 AGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDL 163 Query: 111 GVHI 114 G+++ Sbjct: 164 GINL 167 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1J6Y-A nrPDB 159 3e-40 1YW5-A nrPDB 149 3e-37 4TNS-A nrPDB 143 1e-35 1ZCN-A nrPDB 141 8e-35 3JYJ-A nrPDB 140 1e-34 4U85-A nrPDB 140 1e-34 2LJ4-A nrPDB 131 6e-32 2MNT-A nrPDB 120 1e-28 1M5Y-A nrPDB 107 1e-24 4G2P-A nrPDB 102 2e-23 1JNS-A nrPDB 102 3e-23 2M1I-A nrPDB 101 5e-23 4WO7-A nrPDB 98 9e-22 2M08-A nrPDB 96 2e-21 3RFW-A nrPDB 88 9e-19 5HTF-A nrPDB 88 1e-18 1ZK6-A nrPDB 84 1e-17 1FJD-A nrPDB 84 2e-17 2JZV-A nrPDB 82 7e-17 6BHF-A nrPDB 80 2e-16 5EZ1-A nrPDB 78 6e-16 Sequences not found previously or not previously below threshold: 2PV2-A nrPDB 51 1e-07 2PV3-A nrPDB 51 1e-07 3GPK-A nrPDB 51 2e-07 2KGJ-A nrPDB 41 8e-05 5TVL-A nrPDB 38 8e-04 3NB3-D nrPDB 28 0.73 3NRG-A nrPDB 28 0.95 5J04-A nrPDB 28 1.1 5FVN-A nrPDB 27 1.3 2XE1-A nrPDB 27 1.6 2XE5-A nrPDB 27 1.7 2J5B-A nrPDB 26 3.0 >1J6Y-A nrPDB Length = 139 Score = 159 bits (401), Expect = 3e-40, Method: Composition-based stats. Identities = 119/119 (100%), Positives = 119/119 (100%) Query: 1 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 60 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE Sbjct: 21 MASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFE 80 Query: 61 EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA Sbjct: 81 EVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 139 >1YW5-A nrPDB Length = 177 Score = 149 bits (375), Expect = 3e-37, Method: Composition-based stats. Identities = 58/114 (50%), Positives = 82/114 (71%), Gaps = 3/114 (2%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 QV+ SH+LIK+ SR+ SWK P+G ++ TR+ +++ LK E I+SG+ E+A Sbjct: 67 QVRVSHLLIKNNQSRKPKSWKSPDG---ISRTRDESIQILKKHLERILSGEVKLSELANT 123 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 SDCSS RGGDLG F +GQMQ PFEEA + L VG++S+I++T+SGVHI++RT Sbjct: 124 ESDCSSHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRTG 177 >4TNS-A nrPDB Length = 151 Score = 143 bits (361), Expect = 1e-35, Method: Composition-based stats. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 42 RVRCSHLLVKHSQSRRPSSWRQEQ----ITRTQEEALELINGYIQKIKSGEEDFESLASQ 97 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 98 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 150 >1ZCN-A nrPDB Length = 161 Score = 141 bits (354), Expect = 8e-35, Method: Composition-based stats. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 52 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 107 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 108 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 160 >3JYJ-A nrPDB Length = 123 Score = 140 bits (352), Expect = 1e-34, Method: Composition-based stats. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 14 RVRCSHLLVKHSQSRRPSSWRQEQ----ITRTQEEALELINGYIQKIKSGEEDFESLASQ 69 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 70 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 122 >4U85-A nrPDB Length = 181 Score = 140 bits (352), Expect = 1e-34, Method: Composition-based stats. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 72 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 127 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 128 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 180 >2LJ4-A nrPDB Length = 115 Score = 131 bits (329), Expect = 6e-32, Method: Composition-based stats. Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 2/115 (1%) Query: 5 DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVAT 64 ++++A+H+L+K GSR S + G T E A+++L+ + I SG+ +FEE A+ Sbjct: 3 EKLRAAHLLVKFSGSRNPVSRRT--GDSTADVTYEDAIKELQKWSQRIASGEVSFEEAAS 60 Query: 65 RVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 + SDC S GGDLG F G+M KPFE+A ALK+GDIS IV TDSG+HIIKR A Sbjct: 61 QRSDCGSYASGGDLGFFSSGEMMKPFEDAVRALKIGDISPIVQTDSGLHIIKRLA 115 >2MNT-A nrPDB Length = 120 Score = 120 bits (300), Expect = 1e-28, Method: Composition-based stats. Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%) Query: 11 HILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSI----REDIVSGKANFEEVATRV 66 H+L+KH+ RR +S +T +R A+ ++I +E F +V Sbjct: 8 HVLVKHKDVRRPSSLAPRNKGEKITRSRADAINLAQAILAQHKERKTWSLDEFVQVVRDF 67 Query: 67 SDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 S+C SAKR GDLG G + F+ ++LK G++S V+T+ GVH+I R Sbjct: 68 SECGSAKRDGDLGMVESGTYTEGFDTVAFSLKSGEVSAPVETELGVHLIYRV 119 >1M5Y-A nrPDB Length = 408 Score = 107 bits (267), Expect = 1e-24, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 46/112 (41%), Gaps = 17/112 (15%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V A HIL+K T E A +L+ I DI SGK F A Sbjct: 264 EVHARHILLKPSP----------------IMTDEQARVKLEQIAADIKSGKTTFAAAAKE 307 Query: 66 VS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 S D SA +GGDLG F +A L G +S V + G H+I+ Sbjct: 308 FSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIE 359 Score = 50.6 bits (119), Expect = 2e-07, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 14/114 (12%) Query: 3 SRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEV 62 + ++ SHILI P + + A Q ++I + +G A+F ++ Sbjct: 150 ASTELNLSHILI-------------PLPENPTSDQVNEAESQARAIVDQARNG-ADFGKL 195 Query: 63 ATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 A S A GG +G ++ F +A K GDI + + G HI+K Sbjct: 196 AIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILK 249 >4G2P-A nrPDB Length = 110 Score = 102 bits (255), Expect = 2e-23, Method: Composition-based stats. Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 17/112 (15%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 +V A HIL+K + A +L+ I DI SGK F A Sbjct: 8 EVHARHILLKPSP----------------IMNDQQARLKLEEIAADIKSGKTTFAAAAKE 51 Query: 66 VS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 S D SA +GGDLG F +A L G IS V + G H+I+ Sbjct: 52 YSQDPGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLIE 103 >1JNS-A nrPDB Length = 92 Score = 102 bits (255), Expect = 3e-23, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 5/84 (5%) Query: 33 ILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEE 92 IL + A++ L+ I+ A+F ++A + S C S KRGGDLG F +GQM F++ Sbjct: 9 ILVKEEKLALDLLEQIKNG-----ADFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDK 63 Query: 93 ATYALKVGDISDIVDTDSGVHIIK 116 ++ V + + + T G HIIK Sbjct: 64 VVFSCPVLEPTGPLHTQFGYHIIK 87 >2M1I-A nrPDB Length = 97 Score = 101 bits (252), Expect = 5e-23, Method: Composition-based stats. Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 27/116 (23%) Query: 5 DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVAT 64 D++K SHIL+K QG + +++E + +G+ F ++A Sbjct: 8 DKIKCSHILVKKQG-------------------------EALAVQERLKAGE-KFGKLAK 41 Query: 65 RVS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 +S D SAKR G LG FGRG+M KPFE+A + L+VG++S+ V ++ G H+IKR Sbjct: 42 ELSIDGGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKSEFGYHVIKRLG 97 >4WO7-A nrPDB Length = 263 Score = 98.0 bits (242), Expect = 9e-22, Method: Composition-based stats. Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 9/118 (7%) Query: 2 ASRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEE 61 A++D +K + IK W+ +GKI + A + + + + + G+ FE+ Sbjct: 97 AAKDNIKVTDADIKE-------YWEGLKGKIRASHILVADKKTAEEVEKKLKKGE-KFED 148 Query: 62 VATRVSDCSSAKRGGDLGSFGR-GQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 118 +A S SSA +GGDLG F + GQM + F +A + LK G++SD V T G HIIK+T Sbjct: 149 LAKEYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKT 206 >2M08-A nrPDB Length = 93 Score = 96.4 bits (238), Expect = 2e-21, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 2/94 (2%) Query: 27 DPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVS-DCSSAKRGGDLGSFGRGQ 85 P KI + + + +I E + SG+ F ++A +S D SAK+ G+LG F +G Sbjct: 1 GPSNKIKCSHILVSKQSEALAIMEKLKSGE-KFGKLAKELSIDSGSAKKNGNLGYFTKGM 59 Query: 86 MQKPFEEATYALKVGDISDIVDTDSGVHIIKRTA 119 M KPFE+A + L+VG++S+ + ++ G HIIKR Sbjct: 60 MVKPFEDAAFKLQVGEVSEPIKSEFGYHIIKRFG 93 >3RFW-A nrPDB Length = 252 Score = 88.0 bits (216), Expect = 9e-19, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 6/119 (5%) Query: 5 DQVKASHILIKHQGSRRKASWKDP---EGKIILTTTREAAVEQLKSIRE-DIVSGKANFE 60 + +K +K + K + P + K IL T + A + + ++ A F Sbjct: 87 NTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFS 146 Query: 61 EVATRVS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDI-SDIVDTDSGVHIIKR 117 E+A S D S +GG+LG F + M KPF +A +ALK G I + V T+ G H+I + Sbjct: 147 ELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILK 205 >5HTF-A nrPDB Length = 283 Score = 87.6 bits (215), Expect = 1e-18, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 3/111 (2%) Query: 8 KASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVS 67 KA+ + S+ KA +K E I + K I+ + +G+ F ++A S Sbjct: 95 KATEANMDVSESKLKAYYKTWEPDITVRHILVDDEATAKEIQTKLKNGE-KFTDLAKEYS 153 Query: 68 -DCSSAKRGGDLGSFGRGQMQKPFEEATYALKV-GDISDIVDTDSGVHIIK 116 D +++ GG L FG G+M + FE+A YAL+ D+S IV + G H+I+ Sbjct: 154 TDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQ 204 >1ZK6-A nrPDB Length = 93 Score = 84.5 bits (207), Expect = 1e-17, Method: Composition-based stats. Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 6/87 (6%) Query: 33 ILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGR-GQMQKPFE 91 IL ++ A E K +++ FE++A S SSA +GGDLG F + GQM + F Sbjct: 10 ILVADKKTAEEVEKKLKKG-----EKFEDLAKEYSTDSSASKGGDLGWFAKEGQMDETFS 64 Query: 92 EATYALKVGDISDIVDTDSGVHIIKRT 118 +A + LK G++SD V T G HIIK+T Sbjct: 65 KAAFKLKTGEVSDPVKTQYGYHIIKKT 91 >1FJD-A nrPDB Length = 104 Score = 83.7 bits (205), Expect = 2e-17, Method: Composition-based stats. Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 9/98 (9%) Query: 26 KDPEGKIILTTTREAAVEQLKSIRE--DIVSGKANFEEVATRVSDCSSAKRGGDLGSFGR 83 P+G R E+ I E + + F EVA + S+ A++GGDLG R Sbjct: 2 SGPKGGGNAVKVRHILCEKHGKIMEAMEKLKSGMRFNEVAAQYSE-DKARQGGDLGWMTR 60 Query: 84 GQMQKPFEEATYALKVGDISDIVDTD------SGVHII 115 G M PF+EA +AL V + V TD G HII Sbjct: 61 GSMVGPFQEAAFALPVSGMDKPVFTDPPVKTKFGYHII 98 >2JZV-A nrPDB Length = 111 Score = 81.8 bits (200), Expect = 7e-17, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 11/113 (9%) Query: 5 DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVAT 64 D KASHILIK K+ D EG + A ++ + I++++ + F E+A Sbjct: 6 DSKKASHILIK-----VKSKKSDKEG-----LDDKEAKQKAEEIQKEVSKDPSKFGEIAK 55 Query: 65 RVS-DCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 + S D SAK+ G+LG +GQ K FE+A + LK G++S++V + G HIIK Sbjct: 56 KESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHIIK 108 >6BHF-A nrPDB Length = 299 Score = 79.9 bits (195), Expect = 2e-16, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 33 ILTTTREAAVEQLKSI-REDIVSGKANFEEVATRVS---DCSSAKRGGDLGSFGRGQMQK 88 IL T + A + I ++ +A F E+A R + + +A+ GGDLG F + QM Sbjct: 162 ILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAP 221 Query: 89 PFEEATYALKVGDISD-IVDTDSGVHIIK 116 F +A +AL GD + V T+ G HII Sbjct: 222 DFSKAAFALTPGDYTKTPVKTEFGYHIIY 250 >5EZ1-A nrPDB Length = 277 Score = 78.3 bits (191), Expect = 6e-16, Method: Composition-based stats. Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Query: 33 ILTTTREAAVEQLKSI-REDIVSGKANFEEVATRVS---DCSSAKRGGDLGSFGRGQMQK 88 IL T + A + I ++ +A F E+A R + + +A+ GGDLG F + QM Sbjct: 132 ILVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAP 191 Query: 89 PFEEATYALKVGDISD-IVDTDSGVHIIK 116 F +A +AL GD + V T+ G HII Sbjct: 192 DFSKAAFALTPGDYTKTPVKTEFGYHIIY 220 >2PV2-A nrPDB Length = 103 Score = 51.0 bits (120), Expect = 1e-07, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 14/111 (12%) Query: 6 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 65 ++ SHILI P + + A Q ++I + +G A+F ++A Sbjct: 2 ELNLSHILI-------------PLPENPTSDQVNEAESQARAIVDQARNG-ADFGKLAIA 47 Query: 66 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 S A GG +G ++ F +A K GDI + + G HI+K Sbjct: 48 HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILK 98 >2PV3-A nrPDB Length = 299 Score = 51.0 bits (120), Expect = 1e-07, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 14/114 (12%) Query: 3 SRDQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEV 62 + ++ SHILI P + + A Q ++I + +G A+F ++ Sbjct: 150 ASTELNLSHILI-------------PLPENPTSDQVNEAESQARAIVDQARNG-ADFGKL 195 Query: 63 ATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIK 116 A S A GG +G ++ F +A K GDI + + G HI+K Sbjct: 196 AIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILK 249 >3GPK-A nrPDB Length = 112 Score = 50.6 bits (119), Expect = 2e-07, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 4/90 (4%) Query: 30 GKIILTTTREAAVEQ---LKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQM 86 G+I L T E + + I E + G + F A + S+ S+A GGDLG Q+ Sbjct: 11 GEIFLAATEENKPQVFANAEKIVEQLKQGGS-FVAYARQYSEASTAAVGGDLGWIRLAQL 69 Query: 87 QKPFEEATYALKVGDISDIVDTDSGVHIIK 116 ++ G ++ V+ G I+ Sbjct: 70 PTELATTAASMGPGQLAGPVEIRGGFSILY 99 >2KGJ-A nrPDB Length = 102 Score = 41.3 bits (95), Expect = 8e-05, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 7/86 (8%) Query: 32 IILTTTREAAVEQLKSIREDIVSGKANFEEVATRVS-DCSSAKRGGDLGSFGRGQMQKPF 90 II T T + A L + + +F +A S D SA+ GGD+G + Sbjct: 10 IIQTKTEDEAKAVLDELNKG-----GDFAALAKEKSADIISARNGGDMGWLEDATIPDEL 64 Query: 91 EEATYALKVGDISDIVDTDSGVHIIK 116 + A + G +S ++ + G I++ Sbjct: 65 KNAGLK-EKGQLSGVIKSSVGFLIVR 89 >5TVL-A nrPDB Length = 287 Score = 38.3 bits (87), Expect = 8e-04, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Query: 22 KASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVS-DCSSAKRGGDLGS 80 K ++ + + R ++ K + E + A+F ++A S D + + GG++ Sbjct: 110 KKAFDEYTPDVTAQIIRLNNEDKAKEVLEKAKAEGADFAQLAKDNSTDEKTKENGGEITF 169 Query: 81 FGRGQMQKP-FEEATYALKVGDISDIV 106 ++A +AL V +SD++ Sbjct: 170 DSASTEVPEQVKKAAFALDVDGVSDVI 196 >3NB3-D nrPDB Length = 346 Score = 28.2 bits (61), Expect = 0.73, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 11/73 (15%) Query: 30 GKIILTTTREAAVEQLKSI----REDIVSGKANFEE----VATRVSDCSSAKRGGDLGSF 81 G I ++ R A I R + +G ++ +A + + +A R G LG Sbjct: 194 GGAISSSKRTDAQNTAAYIGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWA 253 Query: 82 GRGQMQKPFEEAT 94 + Q FE Sbjct: 254 NKAQ---NFEAVA 263 >3NRG-A nrPDB Length = 217 Score = 27.9 bits (60), Expect = 0.95, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 16/56 (28%) Query: 74 RGGDLGSFGR--------GQMQKPFE--EATYALKVGDISDIVDTDSGVHIIKRTA 119 R G F + G + + A + L V V T+ G H+I+R A Sbjct: 131 RHGSFAYFKQLVEQGIADGSLVPDLDADTAAFVLNV------VFTELGNHLIERFA 180 >5J04-A nrPDB Length = 425 Score = 27.9 bits (60), Expect = 1.1, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 15/40 (37%) Query: 45 LKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRG 84 S +E + G F +A + D A GD G F Sbjct: 172 APSFKEALRWGAEVFHALAKVLKDKGLATGVGDEGGFAPN 211 >5FVN-A nrPDB Length = 342 Score = 27.5 bits (59), Expect = 1.3, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 13/24 (54%) Query: 62 VATRVSDCSSAKRGGDLGSFGRGQ 85 +A + + +A R G+LG + Q Sbjct: 230 LAAQYTQTYNATRVGNLGWANKAQ 253 >2XE1-A nrPDB Length = 354 Score = 27.1 bits (58), Expect = 1.6, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 3/33 (9%) Query: 62 VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEAT 94 +A + + +A R G LG + Q FE Sbjct: 238 LAAQYTQTYNATRVGSLGWANKAQ---NFEAVA 267 >2XE5-A nrPDB Length = 343 Score = 27.1 bits (58), Expect = 1.7, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 3/33 (9%) Query: 62 VATRVSDCSSAKRGGDLGSFGRGQMQKPFEEAT 94 +A + + +A R G LG + Q FE Sbjct: 231 LAAQYTQTYNATRVGSLGWANKAQ---NFEAVA 260 >2J5B-A nrPDB Length = 348 Score = 26.3 bits (56), Expect = 3.0, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 11 HILIKHQGSRRKASWKDPEGKIILTTTREAAVEQL 45 H+L+ G ++K S DP+G I + T + E++ Sbjct: 221 HMLMSLSGPKKKMSKSDPQGAIFMDDTEQEVSEKI 255 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.122 0.307 Lambda K H 0.267 0.0378 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,842,031 Number of Sequences: 36641 Number of extensions: 122461 Number of successful extensions: 346 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 242 Number of HSP's gapped (non-prelim): 73 length of query: 119 length of database: 10,336,785 effective HSP length: 84 effective length of query: 35 effective length of database: 7,258,941 effective search space: 254062935 effective search space used: 254062935 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 52 (24.8 bits)