BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9S831
         (143 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2WSE-E nrPDB                                                          281   9e-77
5ZJI-E nrPDB                                                          132   5e-32
2O01-E nrPDB                                                          129   3e-31
4Y28-E nrPDB                                                          122   6e-29
3LW5-E nrPDB                                                          115   5e-27
6IGZ-E nrPDB                                                           94   2e-20
6IJJ-E nrPDB                                                           93   4e-20
3PCQ-E nrPDB                                                           84   1e-17
1QP2-A nrPDB                                                           83   4e-17
5ZGB-E nrPDB                                                           69   5e-13
1PSF-A nrPDB                                                           69   6e-13
6FOS-E nrPDB                                                           69   6e-13
6NWA-E nrPDB                                                           61   2e-10
6QE5-A nrPDB                                                           27   3.5  

>2WSE-E nrPDB
          Length = 143

 Score =  281 bits (718), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 143/143 (100%), Positives = 143/143 (100%)

Query: 1   MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSP 60
           MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSP
Sbjct: 1   MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSP 60

Query: 61  AAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRF 120
           AAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRF
Sbjct: 61  AAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRF 120

Query: 121 AKVNYANISTNNYALDEVEEVAA 143
           AKVNYANISTNNYALDEVEEVAA
Sbjct: 121 AKVNYANISTNNYALDEVEEVAA 143


>5ZJI-E nrPDB
          Length = 136

 Score =  132 bits (332), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/142 (57%), Positives = 98/142 (69%), Gaps = 15/142 (10%)

Query: 3   MTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAA 62
           M +A++ F+L A V +  G+S  R + +  P R  G RLV RA          ++ + A 
Sbjct: 6   MASATSRFMLAAGVPT--GSSGGRVNFASAPNR-LGRRLVARA---------DNEAAAAE 53

Query: 63  AAAPDGATATKPK---PPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVR 119
           AA  +GA ATKPK   PPPIGPKRG+KVKILRRESYW+  +G+VV VDQDP TRYPVVVR
Sbjct: 54  AAEGEGAVATKPKAEKPPPIGPKRGAKVKILRRESYWYNGIGNVVTVDQDPNTRYPVVVR 113

Query: 120 FAKVNYANISTNNYALDEVEEV 141
           F KVNYA +STNNYALDEV EV
Sbjct: 114 FNKVNYAGVSTNNYALDEVSEV 135


>2O01-E nrPDB
          Length = 62

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 62/62 (100%), Positives = 62/62 (100%)

Query: 81  PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE 140
           PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE
Sbjct: 1   PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE 60

Query: 141 VA 142
           VA
Sbjct: 61  VA 62


>4Y28-E nrPDB
          Length = 66

 Score =  122 bits (306), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/65 (86%), Positives = 60/65 (92%)

Query: 77  PPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALD 136
           PPIGPKRG+KVKILR+ESYW+K  GSVV VDQDP TRYPVVVRF KVNYAN+STNNYALD
Sbjct: 1   PPIGPKRGAKVKILRQESYWYKGTGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALD 60

Query: 137 EVEEV 141
           EVEEV
Sbjct: 61  EVEEV 65


>3LW5-E nrPDB
          Length = 64

 Score =  115 bits (289), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 53/63 (84%), Positives = 58/63 (92%)

Query: 79  IGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEV 138
           IGPKRG+KVKILR+ESYW+K  GSVVAVDQDP TRYPVVVRF KVNYAN+STNNYALDE+
Sbjct: 1   IGPKRGAKVKILRKESYWYKGTGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEI 60

Query: 139 EEV 141
            EV
Sbjct: 61  VEV 63


>6IGZ-E nrPDB
          Length = 91

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 2/79 (2%)

Query: 64  AAPDGATATKPK-PPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAK 122
           A P  A   +P+ PPP+GPKRGS+VKILR ESYW+   G VV+ DQ    +YPV VRF  
Sbjct: 14  ATPVRAAKAEPETPPPVGPKRGSRVKILRPESYWYNRAGKVVSCDQT-GIKYPVTVRFED 72

Query: 123 VNYANISTNNYALDEVEEV 141
           VNYA +STNN+ L EVEE+
Sbjct: 73  VNYAGVSTNNFGLQEVEEL 91


>6IJJ-E nrPDB
          Length = 143

 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/117 (50%), Positives = 66/117 (56%), Gaps = 26/117 (22%)

Query: 22  ASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPPPIGP 81
           A SSR +++  P R    RLVVRA E                AAP            +GP
Sbjct: 49  ALSSRVNIAAKPQR--AQRLVVRAEE--------------VKAAPKKE---------VGP 83

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEV 138
           KRGS VKILR ESYWF  VG VV+VDQ    RYPVVVRF   NYA ++TNNYALDEV
Sbjct: 84  KRGSLVKILRPESYWFNQVGKVVSVDQS-GVRYPVVVRFENQNYAGVTTNNYALDEV 139


>3PCQ-E nrPDB
          Length = 75

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 51/68 (75%), Gaps = 7/68 (10%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNY-------ANISTNNYA 134
           +RGSKVKILR ESYW+  VG+V +VDQ P  +YPV+VRF KVNY       + ++TNN+A
Sbjct: 2   QRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFA 61

Query: 135 LDEVEEVA 142
           L EV+EVA
Sbjct: 62  LHEVQEVA 69


>1QP2-A nrPDB
          Length = 70

 Score = 82.8 bits (203), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 51/62 (82%), Gaps = 1/62 (1%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
           +RGSKV+ILR ESYWF++VG+V +VDQ    +YPV+VRF KVNY+ I+TNN+A DE+ EV
Sbjct: 3   QRGSKVRILRPESYWFQDVGTVASVDQSG-IKYPVIVRFEKVNYSGINTNNFAEDELVEV 61

Query: 142 AA 143
            A
Sbjct: 62  EA 63


>5ZGB-E nrPDB
          Length = 94

 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
           K+GS VKILR ES+W+  VG+VV V+   K  YPV+VRF KVNY+ +++ N++LDE+ E+
Sbjct: 3   KKGSLVKILRPESFWYNEVGTVVNVETS-KVLYPVLVRFDKVNYSGLNSTNFSLDELVEI 61


>1PSF-A nrPDB
          Length = 69

 Score = 69.3 bits (168), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 8/68 (11%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNY-------ANISTNNYA 134
           +RGSKVKILR+ESYW+ +VG+V ++D+     YPV+VRF KVNY         ++TNN+A
Sbjct: 3   ERGSKVKILRKESYWYGDVGTVASIDKSGII-YPVIVRFNKVNYNGFSGSAGGLNTNNFA 61

Query: 135 LDEVEEVA 142
             E+E V 
Sbjct: 62  EHELEVVG 69


>6FOS-E nrPDB
          Length = 69

 Score = 68.9 bits (167), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
           K+GS VKILR ES+W+  VG+VV V+   K  YPV+VRF KVNY+ +++ N++LDE+ E+
Sbjct: 3   KKGSLVKILRPESFWYNEVGTVVNVET-SKVLYPVLVRFDKVNYSGLNSTNFSLDELVEI 61


>6NWA-E nrPDB
          Length = 74

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 8/68 (11%)

Query: 83  RGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNY-------ANISTNNYAL 135
           RG KV+I R ESYW+ +VG+V +V++     YPV+VRF +VNY       + ++TNN+A 
Sbjct: 5   RGDKVRIKRTESYWYGDVGTVASVEK-SGILYPVIVRFDRVNYNGFSGSASGVNTNNFAE 63

Query: 136 DEVEEVAA 143
           +E+E V A
Sbjct: 64  NELELVQA 71


>6QE5-A nrPDB
          Length = 300

 Score = 26.6 bits (57), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 21/89 (23%)

Query: 49  PAPASSSSKDSPAAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVD- 107
           P   S   KDS A     DG    K K PP+  +RG                  ++ +D 
Sbjct: 145 PLLRSEFQKDSRARVEKADGFQQLKAKLPPVS-RRG------------------LILIDP 185

Query: 108 -QDPKTRYPVVVRFAKVNYANISTNNYAL 135
             + KT Y  VV      Y   +T  YAL
Sbjct: 186 PYEMKTDYQAVVSGIAEGYKRFATGTYAL 214


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2WSE-E nrPDB                                                          185   8e-48
5ZJI-E nrPDB                                                          153   2e-38
6IJJ-E nrPDB                                                          125   5e-30
4Y28-E nrPDB                                                          117   2e-27
6IGZ-E nrPDB                                                          116   4e-27
3LW5-E nrPDB                                                          114   2e-26
2O01-E nrPDB                                                          106   2e-24
1QP2-A nrPDB                                                          105   5e-24
3PCQ-E nrPDB                                                          103   4e-23
6FOS-E nrPDB                                                          102   5e-23
1PSF-A nrPDB                                                          100   3e-22
5ZGB-E nrPDB                                                           93   3e-20
6NWA-E nrPDB                                                           92   8e-20

Sequences not found previously or not previously below threshold:

2PVN-A nrPDB                                                           31   0.17 
4CKE-A nrPDB                                                           31   0.17 
2VDW-A nrPDB                                                           31   0.17 
3IYO-A nrPDB                                                           29   0.69 
3I4J-A nrPDB                                                           28   1.4  
3JB9-E nrPDB                                                           26   6.0  
4PZ2-A nrPDB                                                           26   7.0  


CONVERGED!
>2WSE-E nrPDB
          Length = 143

 Score =  185 bits (468), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 143/143 (100%), Positives = 143/143 (100%)

Query: 1   MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSP 60
           MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSP
Sbjct: 1   MAMTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSP 60

Query: 61  AAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRF 120
           AAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRF
Sbjct: 61  AAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRF 120

Query: 121 AKVNYANISTNNYALDEVEEVAA 143
           AKVNYANISTNNYALDEVEEVAA
Sbjct: 121 AKVNYANISTNNYALDEVEEVAA 143


>5ZJI-E nrPDB
          Length = 136

 Score =  153 bits (386), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 77/139 (55%), Positives = 96/139 (69%), Gaps = 9/139 (6%)

Query: 3   MTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAA 62
           M +A++ F+L A V +  G+S  R + +  P R  G RLV RA ++ A A+ +++   A 
Sbjct: 6   MASATSRFMLAAGVPT--GSSGGRVNFASAPNR-LGRRLVARA-DNEAAAAEAAEGEGAV 61

Query: 63  AAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAK 122
           A  P        KPPPIGPKRG+KVKILRRESYW+  +G+VV VDQDP TRYPVVVRF K
Sbjct: 62  ATKPKAE-----KPPPIGPKRGAKVKILRRESYWYNGIGNVVTVDQDPNTRYPVVVRFNK 116

Query: 123 VNYANISTNNYALDEVEEV 141
           VNYA +STNNYALDEV EV
Sbjct: 117 VNYAGVSTNNYALDEVSEV 135


>6IJJ-E nrPDB
          Length = 143

 Score =  125 bits (314), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/118 (50%), Positives = 66/118 (55%), Gaps = 26/118 (22%)

Query: 22  ASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPPPIGP 81
           A SSR +++  P R    RLVVRA E                AAP            +GP
Sbjct: 49  ALSSRVNIAAKPQR--AQRLVVRAEE--------------VKAAPKKE---------VGP 83

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVE 139
           KRGS VKILR ESYWF  VG VV+VDQ    RYPVVVRF   NYA ++TNNYALDEV 
Sbjct: 84  KRGSLVKILRPESYWFNQVGKVVSVDQS-GVRYPVVVRFENQNYAGVTTNNYALDEVV 140


>4Y28-E nrPDB
          Length = 66

 Score =  117 bits (292), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/65 (86%), Positives = 60/65 (92%)

Query: 77  PPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALD 136
           PPIGPKRG+KVKILR+ESYW+K  GSVV VDQDP TRYPVVVRF KVNYAN+STNNYALD
Sbjct: 1   PPIGPKRGAKVKILRQESYWYKGTGSVVTVDQDPNTRYPVVVRFNKVNYANVSTNNYALD 60

Query: 137 EVEEV 141
           EVEEV
Sbjct: 61  EVEEV 65


>6IGZ-E nrPDB
          Length = 91

 Score =  116 bits (289), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/89 (52%), Positives = 61/89 (68%), Gaps = 2/89 (2%)

Query: 54  SSSKDSPAAAAAPDGATATKPK-PPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKT 112
           S+ + + +  A P  A   +P+ PPP+GPKRGS+VKILR ESYW+   G VV+ DQ    
Sbjct: 4   SAVRIATSVRATPVRAAKAEPETPPPVGPKRGSRVKILRPESYWYNRAGKVVSCDQT-GI 62

Query: 113 RYPVVVRFAKVNYANISTNNYALDEVEEV 141
           +YPV VRF  VNYA +STNN+ L EVEE+
Sbjct: 63  KYPVTVRFEDVNYAGVSTNNFGLQEVEEL 91


>3LW5-E nrPDB
          Length = 64

 Score =  114 bits (284), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/64 (82%), Positives = 58/64 (90%)

Query: 79  IGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEV 138
           IGPKRG+KVKILR+ESYW+K  GSVVAVDQDP TRYPVVVRF KVNYAN+STNNYALDE+
Sbjct: 1   IGPKRGAKVKILRKESYWYKGTGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEI 60

Query: 139 EEVA 142
            EV 
Sbjct: 61  VEVE 64


>2O01-E nrPDB
          Length = 62

 Score =  106 bits (265), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 62/62 (100%), Positives = 62/62 (100%)

Query: 81  PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE 140
           PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE
Sbjct: 1   PKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE 60

Query: 141 VA 142
           VA
Sbjct: 61  VA 62


>1QP2-A nrPDB
          Length = 70

 Score =  105 bits (262), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 51/62 (82%), Gaps = 1/62 (1%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
           +RGSKV+ILR ESYWF++VG+V +VDQ    +YPV+VRF KVNY+ I+TNN+A DE+ EV
Sbjct: 3   QRGSKVRILRPESYWFQDVGTVASVDQS-GIKYPVIVRFEKVNYSGINTNNFAEDELVEV 61

Query: 142 AA 143
            A
Sbjct: 62  EA 63


>3PCQ-E nrPDB
          Length = 75

 Score =  103 bits (255), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/68 (58%), Positives = 51/68 (75%), Gaps = 7/68 (10%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNY-------ANISTNNYA 134
           +RGSKVKILR ESYW+  VG+V +VDQ P  +YPV+VRF KVNY       + ++TNN+A
Sbjct: 2   QRGSKVKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFA 61

Query: 135 LDEVEEVA 142
           L EV+EVA
Sbjct: 62  LHEVQEVA 69


>6FOS-E nrPDB
          Length = 69

 Score =  102 bits (254), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
           K+GS VKILR ES+W+  VG+VV V+   K  YPV+VRF KVNY+ +++ N++LDE+ E+
Sbjct: 3   KKGSLVKILRPESFWYNEVGTVVNVETS-KVLYPVLVRFDKVNYSGLNSTNFSLDELVEI 61


>1PSF-A nrPDB
          Length = 69

 Score =  100 bits (247), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 47/68 (69%), Gaps = 8/68 (11%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNY-------ANISTNNYA 134
           +RGSKVKILR+ESYW+ +VG+V ++D+     YPV+VRF KVNY         ++TNN+A
Sbjct: 3   ERGSKVKILRKESYWYGDVGTVASIDKS-GIIYPVIVRFNKVNYNGFSGSAGGLNTNNFA 61

Query: 135 LDEVEEVA 142
             E+E V 
Sbjct: 62  EHELEVVG 69


>5ZGB-E nrPDB
          Length = 94

 Score = 93.5 bits (230), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 32/60 (53%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 82  KRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
           K+GS VKILR ES+W+  VG+VV V+   K  YPV+VRF KVNY+ +++ N++LDE+ E+
Sbjct: 3   KKGSLVKILRPESFWYNEVGTVVNVETS-KVLYPVLVRFDKVNYSGLNSTNFSLDELVEI 61


>6NWA-E nrPDB
          Length = 74

 Score = 91.9 bits (226), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 8/68 (11%)

Query: 83  RGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNY-------ANISTNNYAL 135
           RG KV+I R ESYW+ +VG+V +V++     YPV+VRF +VNY       + ++TNN+A 
Sbjct: 5   RGDKVRIKRTESYWYGDVGTVASVEKS-GILYPVIVRFDRVNYNGFSGSASGVNTNNFAE 63

Query: 136 DEVEEVAA 143
           +E+E V A
Sbjct: 64  NELELVQA 71


>2PVN-A nrPDB
          Length = 352

 Score = 31.0 bits (68), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 7/52 (13%)

Query: 85  SKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYA----NISTNN 132
           + V +LR + YW     +V   +QD    Y VV +  +  Y+     I+ NN
Sbjct: 28  ADVNVLRPKEYWDYEALTVQWGEQDD---YEVVRKVGRGKYSEVFEGINVNN 76


>4CKE-A nrPDB
          Length = 844

 Score = 31.0 bits (68), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 93  ESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE 140
           E Y++  +  +VA D D         R+ K+N + I T  Y  D ++E
Sbjct: 606 EKYFYGEIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQE 652


>2VDW-A nrPDB
          Length = 302

 Score = 31.0 bits (68), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 93  ESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEE 140
           E Y++  +  +VA D D         R+ K+N + I T  Y  D ++E
Sbjct: 64  EKYFYGEIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQE 110


>3IYO-A nrPDB
          Length = 660

 Score = 29.1 bits (63), Expect = 0.69,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 12  LPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATA 71
              +VT+ AGA   R      P R  GS       +   PA +S +    A AAP  A A
Sbjct: 62  FAPDVTAAAGA-GPRVR---QPARPLGS---AWRDQAQRPAVASRRRPTTAGAAPLTAVA 114

Query: 72  TKPKPPPIGPKRGSKVKILRRE 93
                PP+ P   S+  ILRR+
Sbjct: 115 PAHDTPPV-PDVDSRGAILRRQ 135


>3I4J-A nrPDB
          Length = 430

 Score = 28.0 bits (60), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 7/109 (6%)

Query: 9   VFVLPANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAAAAAPDG 68
            F +   V S  GAS    + S +  R      ++R    P         + A  A    
Sbjct: 121 RFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLR 180

Query: 69  ATATKPKPPPIG-----PKRGSKVKILRRESYWFKNVGSVVAVDQDPKT 112
           A   +  P  +      P  G+    L     +++ V  +   D+    
Sbjct: 181 ALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDI--CDEAGII 227


>3JB9-E nrPDB
          Length = 147

 Score = 26.0 bits (55), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 17/55 (30%)

Query: 38  GSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPPPIGPKRGSKVKILRR 92
           GS L       PA        +P   A P         PPP G  RG+     R 
Sbjct: 92  GSLLSGPGVARPAGRGIPLGQAPVGLAGPVRGVGYTAPPPPAGFGRGAPPPGFRP 146


>4PZ2-A nrPDB
          Length = 534

 Score = 25.7 bits (54), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 14  ANVTSVAGASSSRSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATK 73
           A V       S+  +V   P   AG  LVV+ AE    ++         A  PDG     
Sbjct: 192 AGVIIPWNFPSTMFAVKVAPALAAGCALVVKPAEQTPLSALYLAQLAKQAGVPDGVINVV 251

Query: 74  PKPPPIGPKRGS 85
           P     GP  G+
Sbjct: 252 PG---FGPTAGA 260


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.300    0.113    0.296 

Lambda     K      H
   0.267   0.0338    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,000,375
Number of Sequences: 36641
Number of extensions: 127466
Number of successful extensions: 577
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 432
Number of HSP's gapped (non-prelim): 113
length of query: 143
length of database: 10,336,785
effective HSP length: 88
effective length of query: 55
effective length of database: 7,112,377
effective search space: 391180735
effective search space used: 391180735
T: 11
A: 40
X1: 16 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.3 bits)
S2: 53 (25.3 bits)