BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9RGX8 (353 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1O4Z-A nrPDB 693 0.0 4ATF-A nrPDB 625 e-179 5T9X-A nrPDB 327 5e-90 3WZ1-A nrPDB 324 3e-89 1URX-A nrPDB 229 9e-61 4ASM-B nrPDB 223 1e-58 4ATE-A nrPDB 74 9e-14 6HY3-A nrPDB 66 2e-11 4AWD-A nrPDB 40 0.001 3JUU-A nrPDB 35 0.041 1MFU-A nrPDB 28 4.6 5FU6-A nrPDB 28 5.6 >1O4Z-A nrPDB Length = 346 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/338 (99%), Positives = 336/338 (99%) Query: 16 LGCGDNSKFDSATDLPVEQEQEQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKW 75 + GDNSKFDSATDLPVEQEQEQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKW Sbjct: 1 MDIGDNSKFDSATDLPVEQEQEQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKW 60 Query: 76 EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATR 135 EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATR Sbjct: 61 EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATR 120 Query: 136 KPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADY 195 KPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADY Sbjct: 121 KPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADY 180 Query: 196 SESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPW 255 SESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPW Sbjct: 181 SESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPW 240 Query: 256 HLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSS 315 HLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSS Sbjct: 241 HLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSS 300 Query: 316 PASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 353 PASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK Sbjct: 301 PASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 338 >4ATF-A nrPDB Length = 308 Score = 625 bits (1611), Expect = e-179, Method: Compositional matrix adjust. Identities = 300/303 (99%), Positives = 301/303 (99%) Query: 51 EQDLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWA 110 DLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWA Sbjct: 5 HHDLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWA 64 Query: 111 GPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTL 170 GPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTL Sbjct: 65 GPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTL 124 Query: 171 ASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDA 230 ASDVWLLSADDTQEIDIL+AYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDA Sbjct: 125 ASDVWLLSADDTQEIDILDAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDA 184 Query: 231 GSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTE 290 GSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTE Sbjct: 185 GSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTE 244 Query: 291 IDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKP 350 IDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKP Sbjct: 245 IDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKP 304 Query: 351 VEK 353 VEK Sbjct: 305 VEK 307 >5T9X-A nrPDB Length = 343 Score = 327 bits (838), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 174/332 (52%), Positives = 218/332 (65%), Gaps = 35/332 (10%) Query: 37 EQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSE 96 E+ + G + + + E +W PVP AG MKWE Q SD+F Y A ++NKG+ Sbjct: 29 EENGSENGSNTDPGDSETEFEYEWDKFPVPVSAGTGMKWELQSQSDDFNYTADSNNKGN- 87 Query: 97 FLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRK--------PGSDKINM---- 144 F +KW D+YH W+GP T W+RD V+DG L++ +R DK M Sbjct: 88 FEKKWTDYYHANWSGPAPTIWQRDHISVSDGCLRIETSRPDDVKIVKVTSGDKEKMMPGT 147 Query: 145 --GCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKD 202 GC+TSKTRVVYPVY+EA AK+ NST+ASDVW+LS DDTQEIDI+EAYG+D Sbjct: 148 YTGCVTSKTRVVYPVYVEAYAKIANSTMASDVWMLSPDDTQEIDIIEAYGSDRVVGDDGH 207 Query: 203 HSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFED--GTVWNKEFHRFGVYWRDPWHLEYY 260 Y ++H+SHHVFIRDPFQDYQP D GSW++D GT+W +FHR GVYW+DP++LEYY Sbjct: 208 KFYGPDRIHLSHHVFIRDPFQDYQPTDPGSWYKDVNGTIWRNDFHRVGVYWKDPFNLEYY 267 Query: 261 IDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGL 320 +DG +VR VSGK+IIDP FT TGL+KEMDIIIN EDQ+WR+ SGL Sbjct: 268 VDGKMVRRVSGKNIIDPNDFTKG-----------TGLSKEMDIIINMEDQSWRA--ISGL 314 Query: 321 QSNTYTPTDNELSNIENNTFGVDWIRIYKPVE 352 +PT+ EL N +NNTF VDWIRIYKPVE Sbjct: 315 -----SPTNKELMNKDNNTFLVDWIRIYKPVE 341 >3WZ1-A nrPDB Length = 282 Score = 324 bits (831), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 160/296 (54%), Positives = 199/296 (67%), Gaps = 25/296 (8%) Query: 58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEW 117 DW +PVPA+ G WE +SD+F YEAPA K + F E+W + + N W GPGLTEW Sbjct: 3 ADWDGVPVPANPGSGKTWELHPLSDDFNYEAPAAGKSTRFYERWKEGFINPWTGPGLTEW 62 Query: 118 KRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLL 177 SYV+ G+L + + RKPG++++ +G ITSK + YPVY+EARAK+ N LASD W L Sbjct: 63 HPHYSYVSGGKLAITSGRKPGTNQVYLGSITSKAPLTYPVYMEARAKLSNMVLASDFWFL 122 Query: 178 SADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFED- 236 SAD T+EID++EAYG+D ++++++H+SHHVFIRDPFQDYQP DAGSW+ D Sbjct: 123 SADSTEEIDVIEAYGSDR-----PGQEWYAERLHLSHHVFIRDPFQDYQPTDAGSWYADG 177 Query: 237 -GTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRT 295 GT W FHR GVYWRDPWHLEYY+DG LVRTVSG+DIIDP FT T Sbjct: 178 KGTKWRDAFHRVGVYWRDPWHLEYYVDGKLVRTVSGQDIIDPNGFTGG-----------T 226 Query: 296 GLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPV 351 GL+K M IIN EDQ WRS N TPTD EL++ NT+ VDW+R YKPV Sbjct: 227 GLSKPMYAIINMEDQNWRS-------DNGITPTDAELADPNRNTYYVDWVRFYKPV 275 >1URX-A nrPDB Length = 282 Score = 229 bits (585), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 124/296 (41%), Positives = 177/296 (59%), Gaps = 33/296 (11%) Query: 59 DWKDIPVPADAGPNMKWEFQE-ISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEW 117 DW IPVPA+ G M W+ Q+ +SD+F Y + N+ + F KW Y N W GPG T + Sbjct: 6 DWNGIPVPANPGNGMTWQLQDNVSDSFNYTSSEGNRPTAFTSKWKPSYINGWTGPGSTIF 65 Query: 118 KRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLL 177 +++ +L + A + G+ K G ITSK ++ YPVY+E +AK+M+ LA+ W L Sbjct: 66 NAPQAWTNGSQLAIQA-QPAGNGKSYNGIITSKNKIQYPVYMEIKAKIMDQVLANAFWTL 124 Query: 178 SADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFED- 236 + D+TQ IDI+E YG+D + ++F++++H+SHH FIR+PF DYQP +W+ + Sbjct: 125 TDDETQSIDIMEGYGSD------RGGTWFAQRMHLSHHTFIRNPFTDYQPMGDATWYYNG 178 Query: 237 GTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTG 296 GT W +HR+G YW+DP+ LEYYIDGV VRTV+ +I H TG Sbjct: 179 GTPWRSAYHRYGCYWKDPFTLEYYIDGVKVRTVTRAEIDPNNHLGG------------TG 226 Query: 297 LNKEMDIIINTEDQT-WRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPV 351 LN+ +III+ E+QT WR PA+ T EL++ N F VDWIR+YKPV Sbjct: 227 LNQATNIIIDCENQTDWR--PAA---------TQEELADDSKNIFWVDWIRVYKPV 271 >4ASM-B nrPDB Length = 363 Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 144/369 (39%), Positives = 194/369 (52%), Gaps = 85/369 (23%) Query: 57 EVDWKDIPVPADAGPNMKWEFQ-EISDNFEYEAPADNKGSEFLE----KWDDFYHNA--- 108 + DW ++P+PA+AG W+ Q SD+F Y N +F KW + YHN Sbjct: 7 QYDWDNVPIPANAGAGKTWKLQTAASDDFNYTFNPTNNVVDFGPNGNMKWYNKYHNRPNG 66 Query: 109 ----WAGPGLTEWKRDRSYVADGELKMWATRKPGSDK--------------INMGCITSK 150 + GPG T+W ++ V+ G L +WA+R PG+ K GCIT+K Sbjct: 67 QPNNFEGPGPTKWMQNHVAVSGGNLNIWASRIPGATKSFTGSNNTPISRPETRAGCITNK 126 Query: 151 TRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKV 210 TRV YPV++EAR KVMNSTLASD+WLLS DDTQEIDI+E YG +++ +SYF+ K+ Sbjct: 127 TRVKYPVFVEARVKVMNSTLASDIWLLSPDDTQEIDIMECYGGPGNDNR---NSYFASKI 183 Query: 211 HISHHVFIRDP-FQDYQPKDAGSWFEDGTV--WNKEFHRFGVYWRDPWHLEYYIDGVLVR 267 H+SHHVFIR P F+DYQP D SW+ V W + R GV W P LEY++DG +VR Sbjct: 184 HLSHHVFIRPPNFKDYQPADLNSWWGKNGVTQWGGKTIRIGVNWVSPTRLEYFVDGQMVR 243 Query: 268 T---------------------------VSGK--------------DIIDPKHFTNTT-- 284 V+G+ + D K+ +N + Sbjct: 244 ILDNDAVQTRLADGTWQYTYPAGVTSTGVNGQLIKENGYQKMNIASSLSDAKNKSNISVI 303 Query: 285 DPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTY-TPTDNELSNIENNTFGVD 343 DP N + R +KEMDIIIN EDQ+W Q+ Y +P E++N +N VD Sbjct: 304 DPFNYLNNGRK-FSKEMDIIINVEDQSW--------QAEAYRSPNAAEMANFYDNNLLVD 354 Query: 344 WIRIYKPVE 352 WIR+YKPV Sbjct: 355 WIRVYKPVN 363 >4ATE-A nrPDB Length = 266 Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 55/300 (18%) Query: 63 IPVPADAGPNMKWE-FQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDR 121 +P P + KWE +++SD F N S KW D YH W G + +K+ Sbjct: 9 LPSPTNG---KKWEKVEQLSDEF-------NGNSIDTNKWYD-YHPFWEGRAPSNFKKGN 57 Query: 122 SYVADGELKMWAT--RKPGSDK-------INMGCITSKTRVVYPVYIEARAKVMNSTLAS 172 ++V+DG L + +T ++P S + ++ SKT+ Y EAR K + ++ S Sbjct: 58 AFVSDGFLNLRSTLRKEPSSVQDPFKDIWVDAAAAVSKTKAQPGYYYEARFKASSLSMTS 117 Query: 173 DVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGS 232 W EID++E G E+ D Y + H++ H + + QP G+ Sbjct: 118 SFWF-RVGQFSEIDVIEHIGNPSKENRQDDLPY---QYHVNTHYYGKH--AGLQP--LGT 169 Query: 233 WFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEID 292 ++ F+ +G +W+ P L +Y +G V I Sbjct: 170 EYKMPGRGRDNFYTYGFWWKSPNELLFYFNGKQV----------------------MRIV 207 Query: 293 TRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVE 352 R L++E+ +I +TE + A+ +N P L + NT VDW+R+YK V+ Sbjct: 208 PRVPLDEELRMIFDTEVFPF----ATAGVANIGLPKPENLRDNSKNTMKVDWVRVYKLVD 263 >6HY3-A nrPDB Length = 272 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 62/304 (20%) Query: 62 DIPVPADAGPNMKW-EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRD 120 + P PA G MKW + ++SD F N G D + + W + K + Sbjct: 19 NTPPPAPQG--MKWVKISQLSDEF-------NNGFNT----DKWTKSLWNYGVPVQMKAE 65 Query: 121 RSYVADGELKMWATRKPGSDK---INMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLL 177 S V+DG K+W G+D + SK +V YP+Y +R K + + + WL Sbjct: 66 NSGVSDG--KLWIKATLGNDPERWFETSRVMSKAQVNYPMYTVSRIKGAHISAYNTFWLN 123 Query: 178 SAD--DTQEIDILEAYGADYSESAGKDHSY--FSKKVHISHHVFIRDP--FQDYQPKDAG 231 + + + EID++E ++ S + D + S+ H+ + R+ F + + DA Sbjct: 124 NGNISNRNEIDVIEN-NSNPSCNCQPDFPWQMNSQYFHVVNDDTKRNKGNFDNRELSDAN 182 Query: 232 SWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEI 291 G WN+E+H FGV+W+D H+++Y+DG +P + + Sbjct: 183 P--LKGVAWNEEYHTFGVWWKDATHIQFYLDG---------------------EPAGSVV 219 Query: 292 DTRTGLNKEMDII--INTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYK 349 R +E++II + T D W A LSN NT +DWI Y+ Sbjct: 220 SARD-FTRELNIIWDLWTVDADWLGGLAK----------KEHLSNNNINTMKIDWIHTYQ 268 Query: 350 PVEK 353 VE+ Sbjct: 269 LVEE 272 >4AWD-A nrPDB Length = 324 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/243 (23%), Positives = 98/243 (40%), Gaps = 57/243 (23%) Query: 136 KPGSD-KINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWL---------------LSA 179 KPG ++ G + S + Y E R K +T++S WL + Sbjct: 112 KPGDKYRLAGGAVASVKNQAHYGYYETRMKASLTTMSSTFWLSNRPVMKEIMKGGKKIKT 171 Query: 180 DDTQEIDILEAYGADYSESAGKDHSY---FSKKVHISHHVFIRDPF-----QDYQPKDAG 231 +QE+DI+E G S D+ + ++ +++ + H + ++ + D Sbjct: 172 WSSQELDIIETMGI--IRSVNPDNPWNKTWNMQMNSNTHYWYQEQGGKRTDNTAKRSDVV 229 Query: 232 SWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEI 291 S+ D + ++FH +G +W D +++Y DG + T+ K T TD Sbjct: 230 SYMTDPSA--EDFHTYGCWWVDANTVKFYYDGKYMYTI--------KPTTKYTD------ 273 Query: 292 DTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYK-- 349 T ++ M I I TE W PT +L + + +T DW+R YK Sbjct: 274 ---TPFDRPMFIHIVTETYDWEKQ----------VPTAEDLKDKDKSTTYYDWVRAYKLV 320 Query: 350 PVE 352 P+E Sbjct: 321 PIE 323 >3JUU-A nrPDB Length = 280 Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 31/218 (14%) Query: 71 PNMKWEFQE-ISDNFEYEAPADNKGSEFLEKWDDFYHNAWAG--PGLTEWKRDRSYVADG 127 P+ +W+ E +SD FE G + EK W G PGL + + + +G Sbjct: 23 PHQEWKLIENMSDEFE--------GKKIDEKKWQISGQGWIGRAPGL--FLAENISLNNG 72 Query: 128 ELKMWATRKPGSDKIN-------MGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSAD 180 L++ T P N G + S+ + Y Y E K + ++S WL++ Sbjct: 73 SLQITTTMLPEPIVKNNKTYTHGGGYVGSRNGMTYGYY-ECEMKANKTFMSSTFWLINEG 131 Query: 181 D--------TQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGS 232 T E+DI E+ G +++ YF + ++ + H +Y+ + Sbjct: 132 KDRLGCDKRTTELDIQESVGQITNDADW--MKYFDQTMNSNTHSRNIPEGCEYEKGSSKG 189 Query: 233 WFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVS 270 E G ++FH +GV+W+ + +++DG + V+ Sbjct: 190 KAELGGKAYEDFHVYGVWWKSKDEIIFFLDGKMQSKVT 227 >1MFU-A nrPDB Length = 491 Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 269 VSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYT 326 V+ ++++D + FTN D G+ ++ G I+ N +D T+ + +GL + TY Sbjct: 390 VNFRNVVDGQPFTNWYDNGSNQV--AFGRGNRGFIVFNNDDWTFSLTLQTGLPAGTYC 445 >5FU6-A nrPDB Length = 535 Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 70 GPNMKWEFQEISDNFEYEAP--ADNKGSEFLEKWDDFYHNAWAG 111 GP+M E IS EY+ P K L +W + YH+A AG Sbjct: 1 GPHM-LEHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAG 43 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1O4Z-A nrPDB 514 e-146 4ATF-A nrPDB 456 e-129 5T9X-A nrPDB 379 e-106 3WZ1-A nrPDB 363 e-101 1URX-A nrPDB 312 1e-85 4ASM-B nrPDB 300 7e-82 4ATE-A nrPDB 249 2e-66 6HY3-A nrPDB 215 2e-56 4AWD-A nrPDB 189 2e-48 Sequences not found previously or not previously below threshold: 3JUU-A nrPDB 107 9e-24 1DYP-A nrPDB 57 1e-08 3WVJ-A nrPDB 54 1e-07 3ATG-A nrPDB 52 4e-07 5NBP-A nrPDB 50 1e-06 2HYK-A nrPDB 50 1e-06 4BPZ-A nrPDB 47 1e-05 4CRQ-A nrPDB 45 5e-05 3AZZ-A nrPDB 44 1e-04 1UPS-A nrPDB 42 5e-04 5WUT-A nrPDB 40 0.001 4PQ9-A nrPDB 36 0.019 6JHJ-A nrPDB 33 0.14 4XXP-A nrPDB 33 0.18 2QV3-A nrPDB 31 0.89 6NYJ-A nrPDB 30 2.0 2AAA-A nrPDB 29 3.4 2YIB-D nrPDB 28 5.1 2YIB-A nrPDB 28 5.5 6GAZ-Ae nrPDB 28 7.9 >1O4Z-A nrPDB Length = 346 Score = 514 bits (1324), Expect = e-146, Method: Composition-based stats. Identities = 335/338 (99%), Positives = 336/338 (99%) Query: 16 LGCGDNSKFDSATDLPVEQEQEQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKW 75 + GDNSKFDSATDLPVEQEQEQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKW Sbjct: 1 MDIGDNSKFDSATDLPVEQEQEQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKW 60 Query: 76 EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATR 135 EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATR Sbjct: 61 EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATR 120 Query: 136 KPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADY 195 KPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADY Sbjct: 121 KPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADY 180 Query: 196 SESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPW 255 SESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPW Sbjct: 181 SESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPW 240 Query: 256 HLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSS 315 HLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSS Sbjct: 241 HLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSS 300 Query: 316 PASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 353 PASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK Sbjct: 301 PASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 338 >4ATF-A nrPDB Length = 308 Score = 456 bits (1172), Expect = e-129, Method: Composition-based stats. Identities = 300/303 (99%), Positives = 301/303 (99%) Query: 51 EQDLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWA 110 DLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWA Sbjct: 5 HHDLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWA 64 Query: 111 GPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTL 170 GPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTL Sbjct: 65 GPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTL 124 Query: 171 ASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDA 230 ASDVWLLSADDTQEIDIL+AYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDA Sbjct: 125 ASDVWLLSADDTQEIDILDAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDA 184 Query: 231 GSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTE 290 GSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTE Sbjct: 185 GSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTE 244 Query: 291 IDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKP 350 IDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKP Sbjct: 245 IDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKP 304 Query: 351 VEK 353 VEK Sbjct: 305 VEK 307 >5T9X-A nrPDB Length = 343 Score = 379 bits (973), Expect = e-106, Method: Composition-based stats. Identities = 170/333 (51%), Positives = 214/333 (64%), Gaps = 35/333 (10%) Query: 37 EQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSE 96 E+ + G + + + E +W PVP AG MKWE Q SD+F Y A ++NKG Sbjct: 29 EENGSENGSNTDPGDSETEFEYEWDKFPVPVSAGTGMKWELQSQSDDFNYTADSNNKG-N 87 Query: 97 FLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRK--------PGSDK------I 142 F +KW D+YH W+GP T W+RD V+DG L++ +R DK Sbjct: 88 FEKKWTDYYHANWSGPAPTIWQRDHISVSDGCLRIETSRPDDVKIVKVTSGDKEKMMPGT 147 Query: 143 NMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKD 202 GC+TSKTRVVYPVY+EA AK+ NST+ASDVW+LS DDTQEIDI+EAYG+D Sbjct: 148 YTGCVTSKTRVVYPVYVEAYAKIANSTMASDVWMLSPDDTQEIDIIEAYGSDRVVGDDGH 207 Query: 203 HSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFED--GTVWNKEFHRFGVYWRDPWHLEYY 260 Y ++H+SHHVFIRDPFQDYQP D GSW++D GT+W +FHR GVYW+DP++LEYY Sbjct: 208 KFYGPDRIHLSHHVFIRDPFQDYQPTDPGSWYKDVNGTIWRNDFHRVGVYWKDPFNLEYY 267 Query: 261 IDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGL 320 +DG +VR VSGK+IIDP FT TGL+KEMDIIIN EDQ+WR+ Sbjct: 268 VDGKMVRRVSGKNIIDPNDFTKG-----------TGLSKEMDIIINMEDQSWRA------ 310 Query: 321 QSNTYTPTDNELSNIENNTFGVDWIRIYKPVEK 353 + +PT+ EL N +NNTF VDWIRIYKPVE Sbjct: 311 -ISGLSPTNKELMNKDNNTFLVDWIRIYKPVED 342 >3WZ1-A nrPDB Length = 282 Score = 363 bits (931), Expect = e-101, Method: Composition-based stats. Identities = 160/296 (54%), Positives = 199/296 (67%), Gaps = 25/296 (8%) Query: 58 VDWKDIPVPADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEW 117 DW +PVPA+ G WE +SD+F YEAPA K + F E+W + + N W GPGLTEW Sbjct: 3 ADWDGVPVPANPGSGKTWELHPLSDDFNYEAPAAGKSTRFYERWKEGFINPWTGPGLTEW 62 Query: 118 KRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLL 177 SYV+ G+L + + RKPG++++ +G ITSK + YPVY+EARAK+ N LASD W L Sbjct: 63 HPHYSYVSGGKLAITSGRKPGTNQVYLGSITSKAPLTYPVYMEARAKLSNMVLASDFWFL 122 Query: 178 SADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFED- 236 SAD T+EID++EAYG+D ++++++H+SHHVFIRDPFQDYQP DAGSW+ D Sbjct: 123 SADSTEEIDVIEAYGSDR-----PGQEWYAERLHLSHHVFIRDPFQDYQPTDAGSWYADG 177 Query: 237 -GTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRT 295 GT W FHR GVYWRDPWHLEYY+DG LVRTVSG+DIIDP FT T Sbjct: 178 KGTKWRDAFHRVGVYWRDPWHLEYYVDGKLVRTVSGQDIIDPNGFTGG-----------T 226 Query: 296 GLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPV 351 GL+K M IIN EDQ WRS N TPTD EL++ NT+ VDW+R YKPV Sbjct: 227 GLSKPMYAIINMEDQNWRS-------DNGITPTDAELADPNRNTYYVDWVRFYKPV 275 >1URX-A nrPDB Length = 282 Score = 312 bits (799), Expect = 1e-85, Method: Composition-based stats. Identities = 121/296 (40%), Positives = 173/296 (58%), Gaps = 33/296 (11%) Query: 59 DWKDIPVPADAGPNMKWEFQE-ISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEW 117 DW IPVPA+ G M W+ Q+ +SD+F Y + N+ + F KW Y N W GPG T + Sbjct: 6 DWNGIPVPANPGNGMTWQLQDNVSDSFNYTSSEGNRPTAFTSKWKPSYINGWTGPGSTIF 65 Query: 118 KRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLL 177 +++ +L + A + G+ K G ITSK ++ YPVY+E +AK+M+ LA+ W L Sbjct: 66 NAPQAWTNGSQLAIQA-QPAGNGKSYNGIITSKNKIQYPVYMEIKAKIMDQVLANAFWTL 124 Query: 178 SADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFED- 236 + D+TQ IDI+E YG+D ++F++++H+SHH FIR+PF DYQP +W+ + Sbjct: 125 TDDETQSIDIMEGYGSDR------GGTWFAQRMHLSHHTFIRNPFTDYQPMGDATWYYNG 178 Query: 237 GTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTG 296 GT W +HR+G YW+DP+ LEYYIDGV VRTV+ +I H TG Sbjct: 179 GTPWRSAYHRYGCYWKDPFTLEYYIDGVKVRTVTRAEIDPNNHLGG------------TG 226 Query: 297 LNKEMDIIINTEDQ-TWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPV 351 LN+ +III+ E+Q WR + T EL++ N F VDWIR+YKPV Sbjct: 227 LNQATNIIIDCENQTDWRPAA-----------TQEELADDSKNIFWVDWIRVYKPV 271 >4ASM-B nrPDB Length = 363 Score = 300 bits (767), Expect = 7e-82, Method: Composition-based stats. Identities = 140/368 (38%), Positives = 190/368 (51%), Gaps = 83/368 (22%) Query: 57 EVDWKDIPVPADAGPNMKWEFQ-EISDNFEYEAPADNKGSEFLE----KWDDFYHNA--- 108 + DW ++P+PA+AG W+ Q SD+F Y N +F KW + YHN Sbjct: 7 QYDWDNVPIPANAGAGKTWKLQTAASDDFNYTFNPTNNVVDFGPNGNMKWYNKYHNRPNG 66 Query: 109 ----WAGPGLTEWKRDRSYVADGELKMWATRKPGSDK--------------INMGCITSK 150 + GPG T+W ++ V+ G L +WA+R PG+ K GCIT+K Sbjct: 67 QPNNFEGPGPTKWMQNHVAVSGGNLNIWASRIPGATKSFTGSNNTPISRPETRAGCITNK 126 Query: 151 TRVVYPVYIEARAKVMNSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKV 210 TRV YPV++EAR KVMNSTLASD+WLLS DDTQEIDI+E YG +++ +SYF+ K+ Sbjct: 127 TRVKYPVFVEARVKVMNSTLASDIWLLSPDDTQEIDIMECYGGPGNDNR---NSYFASKI 183 Query: 211 HISHHVFIRDP-FQDYQPKDAGSWFEDGTV--WNKEFHRFGVYWRDPWHLEYYIDGVLVR 267 H+SHHVFIR P F+DYQP D SW+ V W + R GV W P LEY++DG +VR Sbjct: 184 HLSHHVFIRPPNFKDYQPADLNSWWGKNGVTQWGGKTIRIGVNWVSPTRLEYFVDGQMVR 243 Query: 268 TVS-----------------------------------------GKDIIDPKHFTNTT-- 284 + + D K+ +N + Sbjct: 244 ILDNDAVQTRLADGTWQYTYPAGVTSTGVNGQLIKENGYQKMNIASSLSDAKNKSNISVI 303 Query: 285 DPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDW 344 DP N + R +KEMDIIIN EDQ+W++ +P E++N +N VDW Sbjct: 304 DPFNYLNNGRK-FSKEMDIIINVEDQSWQAEAYR-------SPNAAEMANFYDNNLLVDW 355 Query: 345 IRIYKPVE 352 IR+YKPV Sbjct: 356 IRVYKPVN 363 >4ATE-A nrPDB Length = 266 Score = 249 bits (634), Expect = 2e-66, Method: Composition-based stats. Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 55/300 (18%) Query: 63 IPVPADAGPNMKWE-FQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDR 121 +P P + KWE +++SD F N S KW D YH W G + +K+ Sbjct: 9 LPSPTN---GKKWEKVEQLSDEF-------NGNSIDTNKWYD-YHPFWEGRAPSNFKKGN 57 Query: 122 SYVADGELKMWAT--RKPGSDK-------INMGCITSKTRVVYPVYIEARAKVMNSTLAS 172 ++V+DG L + +T ++P S + ++ SKT+ Y EAR K + ++ S Sbjct: 58 AFVSDGFLNLRSTLRKEPSSVQDPFKDIWVDAAAAVSKTKAQPGYYYEARFKASSLSMTS 117 Query: 173 DVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGS 232 W EID++E G E+ D Y + H++ H + + QP G+ Sbjct: 118 SFWF-RVGQFSEIDVIEHIGNPSKENRQDDLPY---QYHVNTHYYGKH--AGLQP--LGT 169 Query: 233 WFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEID 292 ++ F+ +G +W+ P L +Y +G V I Sbjct: 170 EYKMPGRGRDNFYTYGFWWKSPNELLFYFNGKQV----------------------MRIV 207 Query: 293 TRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKPVE 352 R L++E+ +I +TE + A+ +N P L + NT VDW+R+YK V+ Sbjct: 208 PRVPLDEELRMIFDTEVFPF----ATAGVANIGLPKPENLRDNSKNTMKVDWVRVYKLVD 263 >6HY3-A nrPDB Length = 272 Score = 215 bits (548), Expect = 2e-56, Method: Composition-based stats. Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 62/304 (20%) Query: 62 DIPVPADAGPNMKW-EFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRD 120 + P PA G MKW + ++SD F N G D + + W + K + Sbjct: 19 NTPPPAPQG--MKWVKISQLSDEF-------NNGFNT----DKWTKSLWNYGVPVQMKAE 65 Query: 121 RSYVADGELKMWATRKPGSDK---INMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLL 177 S V+DG K+W G+D + SK +V YP+Y +R K + + + WL Sbjct: 66 NSGVSDG--KLWIKATLGNDPERWFETSRVMSKAQVNYPMYTVSRIKGAHISAYNTFWLN 123 Query: 178 SAD--DTQEIDILEAYGADYSESAGKDHSY--FSKKVHISHHVFIRDP--FQDYQPKDAG 231 + + + EID++E ++ S + D + S+ H+ + R+ F + + DA Sbjct: 124 NGNISNRNEIDVIEN-NSNPSCNCQPDFPWQMNSQYFHVVNDDTKRNKGNFDNRELSDAN 182 Query: 232 SWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEI 291 G WN+E+H FGV+W+D H+++Y+DG +P + + Sbjct: 183 P--LKGVAWNEEYHTFGVWWKDATHIQFYLDG---------------------EPAGSVV 219 Query: 292 DTRTGLNKEMDII--INTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYK 349 R +E++II + T D W A LSN NT +DWI Y+ Sbjct: 220 SARD-FTRELNIIWDLWTVDADWLGGLAK----------KEHLSNNNINTMKIDWIHTYQ 268 Query: 350 PVEK 353 VE+ Sbjct: 269 LVEE 272 >4AWD-A nrPDB Length = 324 Score = 189 bits (479), Expect = 2e-48, Method: Composition-based stats. Identities = 70/325 (21%), Positives = 122/325 (37%), Gaps = 75/325 (23%) Query: 61 KDIPVPADAGPNMKWEF-QEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKR 119 K++P +A KW ++ +D F + K W G +K Sbjct: 37 KNLP---EAPEGYKWVVNEDYTDEFNGKRLNAAKWHAKSPYWT-------NGRPPATFKA 86 Query: 120 DRSYVADGELKMWAT---------RKPGSD-KINMGCITSKTRVVYPVYIEARAKVMNST 169 + V G L++ T KPG ++ G + S + Y E R K +T Sbjct: 87 ENVSVKKGCLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLTT 146 Query: 170 LASDVWL---------------LSADDTQEIDILEAYGADYSESAGKDHSY---FSKKVH 211 ++S WL + +QE+DI+E G S D+ + ++ +++ Sbjct: 147 MSSTFWLSNRPVMKEIMKGGKKIKTWSSQELDIIETMGI--IRSVNPDNPWNKTWNMQMN 204 Query: 212 ISHHVFIRDPF-----QDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLV 266 + H + ++ + D S+ D + ++FH +G +W D +++Y DG + Sbjct: 205 SNTHYWYQEQGGKRTDNTAKRSDVVSYMTDPSA--EDFHTYGCWWVDANTVKFYYDGKYM 262 Query: 267 RTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYT 326 T+ K T TD T ++ M I I TE W Sbjct: 263 YTI--------KPTTKYTD---------TPFDRPMFIHIVTETYDWEKQ----------V 295 Query: 327 PTDNELSNIENNTFGVDWIRIYKPV 351 PT +L + + +T DW+R YK V Sbjct: 296 PTAEDLKDKDKSTTYYDWVRAYKLV 320 >3JUU-A nrPDB Length = 280 Score = 107 bits (266), Expect = 9e-24, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 111/305 (36%), Gaps = 59/305 (19%) Query: 64 PVPADAGPNMKWEF-QEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRS 122 P P+ +W+ + +SD FE +KW W G + + Sbjct: 16 PGEDPRQPHQEWKLIENMSDEFE-------GKKIDEKKW-QISGQGWIGRAPGLFLAENI 67 Query: 123 YVADGELKMWATRKP----GSDKIN---MGCITSKTRVVYPVYIEARAKVMNSTLASDVW 175 + +G L++ T P ++K G + S+ + Y Y E K + ++S W Sbjct: 68 SLNNGSLQITTTMLPEPIVKNNKTYTHGGGYVGSRNGMTYG-YYECEMKANKTFMSSTFW 126 Query: 176 LLSADD--------TQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQP 227 L++ T E+DI E+ G + YF + ++ + H +Y+ Sbjct: 127 LINEGKDRLGCDKRTTELDIQESVG--QITNDADWMKYFDQTMNSNTHSRNIPEGCEYEK 184 Query: 228 KDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPG 287 + E G ++FH +GV+W+ + +++DG + Sbjct: 185 GSSKGKAELGGKAYEDFHVYGVWWKSKDEIIFFLDGKM---------------------- 222 Query: 288 NTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRI 347 +++ + EM + + E W P G + + E+ T +W+R Sbjct: 223 QSKVTPPADFDIEMYLRMVVETYDWNPVPKDGGMTGS----------KEDRTTTYNWVRS 272 Query: 348 YKPVE 352 ++ V+ Sbjct: 273 WQLVD 277 >1DYP-A nrPDB Length = 271 Score = 56.8 bits (135), Expect = 1e-08, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 76/229 (33%), Gaps = 47/229 (20%) Query: 66 PADAGPNMKWEFQEI-SDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYV 124 P A P W Q SD F + KW+ N G+ WK + + V Sbjct: 4 PPIAKPGETWILQAKRSDEFN---------VKDATKWNFQTENY----GVWSWKNENATV 50 Query: 125 ADGELKMWATRKPGSDKINMGC---------------ITSKTRVVYPVYIEARAKVMNS- 168 + G+LK+ R+ GC + Y EAR K ++ Sbjct: 51 SKGKLKLTTKRESHQRTFWDGCNQQQVANYPLYYTSGVAKSRATGNYGYYEARIKGASTF 110 Query: 169 -TLASDVWLLSADDT----------QEIDILEAYGADYSESAGKDHSYFSKKVHISHHVF 217 ++ W+ S D EID++E S DH + V + Sbjct: 111 PGVSPAFWMYSTIDRSLTKEGDVQYSEIDVVEL--TQKSAVRESDHDLHNIVVKNGKPTW 168 Query: 218 IRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLV 266 +R P+ + + +FH +GV + +Y+DG +V Sbjct: 169 MRP---GSFPQTNHNGYHLPFDPRNDFHTYGVN-VTKDKITWYVDGEIV 213 >3WVJ-A nrPDB Length = 220 Score = 53.7 bits (127), Expect = 1e-07, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 70/210 (33%), Gaps = 33/210 (15%) Query: 103 DFYHNAWAGPGLTE--WKRDRSYVADGELKMWATRKPGSD-KINMGCITSKTRVVYPVYI 159 + WA + WK + ++G++ + R+ G G +K+ Y Y Sbjct: 19 QWEKADWANGSVFNCVWKPSQVTFSNGKMILTLDREYGGSYPYKSGEYRTKSFFGYG-YY 77 Query: 160 EARAKVM-NSTLASDVWLLSADDTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFI 218 E R K N + S + + ++ + + Sbjct: 78 EVRMKAAKNVGIVSSFFTYTGPS-------------------DNNPWDEIDIEFLGKDTT 118 Query: 219 RDPFQDYQPKDAGSWFEDGTVW--NKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIID 276 + F Y+ G+ + + +++FH +G WR P ++++Y+DG V + + Sbjct: 119 KVQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWR-PDYIDFYVDGKKVYRGTRNIPVT 177 Query: 277 PKHF------TNTTDPGNTEIDTRTGLNKE 300 P D D RT L E Sbjct: 178 PGKIMMNLWPGIGVDEWLGRYDGRTPLQAE 207 >3ATG-A nrPDB Length = 256 Score = 51.8 bits (122), Expect = 4e-07, Method: Composition-based stats. Identities = 51/282 (18%), Positives = 92/282 (32%), Gaps = 65/282 (23%) Query: 81 SDNFEYEAPADNKGSEFLEKWDDFY-HNAWAGPGLTEWKRDRSYVA-DGELKMWAT-RKP 137 SD F+ A + + W+ + W L + R+ A DG+ + T R+ Sbjct: 8 SDEFDGAAGSAPNPAV----WNHETGAHGWGNAELQNYTASRANSALDGQGNLVITARRE 63 Query: 138 GSDKINMGCITSKTRVVY-PVYIEARAKVMN-STLASDVWLLSAD-------DTQEIDIL 188 G +T++ + IEAR ++ + W+L + EIDI+ Sbjct: 64 GDGSYTSARMTTQGKYQPQYGRIEARIQIPRGQGIWPAFWMLGGSFPGTPWPSSGEIDIM 123 Query: 189 EAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWN--KEFHR 246 E G + +VH + H ++ W+ FH Sbjct: 124 ENVG------------FEPHRVHGTVHGPGYSGG-----SGITGMYQHPQGWSFADTFHT 166 Query: 247 FGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIIN 306 F V W+ P + +++DG V+ + ++ +I+N Sbjct: 167 FAVDWK-PGEITWFVDGQQFHRVTRASVGANAWV----------------FDQPFFLILN 209 Query: 307 TEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIY 348 A G Q Y +L VD++R+Y Sbjct: 210 V---------AVGGQWPGYPDGTTQLPQQ----MKVDYVRVY 238 >5NBP-A nrPDB Length = 272 Score = 50.3 bits (118), Expect = 1e-06, Method: Composition-based stats. Identities = 53/265 (20%), Positives = 87/265 (32%), Gaps = 47/265 (17%) Query: 94 GSEFLEKWDDFYH-NAWAGPGLTEWKRDRSYVA-DGELKMWA-TRKPGSDKINMGCITSK 150 + W H W L + V DG+ + T + +KI G I SK Sbjct: 43 NFFDEKVWTKETHEPGWTNQELQAYDAAHVSVGKDGDKSVLILTAERKGNKIYSGRINSK 102 Query: 151 TRVVYPVY-IEARAKV--MNSTLASDVWLLSADDTQ-----EIDILEAYGADYSESAGKD 202 + + IEA K+ N L W++ +D Q EIDI+E G +AG Sbjct: 103 GKKSFKYRKIEASIKLPKTNGGLWPAFWMMGDNDKQWPACGEIDIME-MGEQSGMAAGDS 161 Query: 203 HSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYID 262 + +H + Q Y + + +DG +H + + W D +L ID Sbjct: 162 EKQVNTAIHYGPSAAAHE--QQYYKANVANSLQDG-----NYHTYSLDW-DENNLTISID 213 Query: 263 GVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQS 322 V T +I + T + I+ N + Sbjct: 214 NVKFHT--------------------FDISSNTYFHDNFYILFNL-------AVGGAFTG 246 Query: 323 NTYTPTDNELSNIENNTFGVDWIRI 347 T L + + +DW++I Sbjct: 247 ITDINKLTGLKDGQKVNMYIDWVKI 271 >2HYK-A nrPDB Length = 245 Score = 49.9 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 91/280 (32%), Gaps = 57/280 (20%) Query: 81 SDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSD 140 SD F+ A + + + + D T+ + + + +G L + A ++ Sbjct: 12 SDEFDGPAGSAPDPANWNHETGDHGWGNNELQNYTDSRANSALDGNGNLVITARQEA-DG 70 Query: 141 KINMGCITSKTRVVY-PVYIEARAKVMN-STLASDVWLLSAD-------DTQEIDILEAY 191 +T++ +V +EA ++ + W+L AD D+ EIDI+E Sbjct: 71 GYTSARLTTQNKVQPQYGRVEASIQIPRGQGIWPAFWMLGADFPNTPWPDSGEIDIMENI 130 Query: 192 GADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYW 251 G + H+ H + +P G + FH F V W Sbjct: 131 GREP---------------HLVHGSLHGPGYFGGEPLTGSYMHPQGWSFADTFHTFAVDW 175 Query: 252 RDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTED-Q 310 R P + + +DGV +T + D ++ +I+N Sbjct: 176 R-PGSITWSVDGVAYQTYTSADTRGNPWV----------------FDQPFFMILNVAVGG 218 Query: 311 TWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYKP 350 W P Q VD++R+Y+ Sbjct: 219 DWPGYPDGSTQFPQE--------------MRVDYVRVYEL 244 >4BPZ-A nrPDB Length = 256 Score = 47.2 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 100/285 (35%), Gaps = 60/285 (21%) Query: 81 SDNFEYEAPADNKGSEFLEKWDDFYHNA----WAGPGLTEW--KRDRSYVADGELKMWAT 134 SD FEYE D EKW W L + + + S+V+DG LK+ A Sbjct: 16 SDEFEYEGKPD------PEKWHYQVIPPNNGSWHNNELQHYTNRSENSFVSDGTLKIRAI 69 Query: 135 RKP----GSDKINMGCITSKTRVVYPVYIEARAKV-MNSTLASDVWLLSADDTQEIDIL- 188 ++ GS K + +E RAK+ +W L A+ + + Sbjct: 70 KEKYTFEGSTKDYTSARLNSKFAFTYGKVEVRAKLPSKKGTWPAIWTLGANSNETGNYFG 129 Query: 189 EAYGADYSESAGK----DHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEF 244 E YG + G + + + K+ I+H + +YQ + + + F Sbjct: 130 EQYGNAEWPACGSIDILEQNGWDKESTIAHFHWSDLNSDEYQNLGGTTPITNAS---GSF 186 Query: 245 HRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDII 304 H + + W + ++ ++D LV + + T N ++ Sbjct: 187 HVYSLEW-NASAMKVFLDDTLVYEL--------------------KNSQNTPYNAPHYLL 225 Query: 305 INTEDQTWRSSPASGLQSNTYTPTDNELSNIENNTFGVDWIRIYK 349 +N A G P N ++ F +D++RIY+ Sbjct: 226 LNI---------AMGGTLGGDIP-----ENFTDDIFEIDYVRIYQ 256 >4CRQ-A nrPDB Length = 233 Score = 44.9 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 86/256 (33%), Gaps = 63/256 (24%) Query: 106 HNAWAGPGLTEWKRDRSYVADGELKMWATRKP-GSDKINMGCITSKTRVVY-PVYIEARA 163 +N W L ++R+ + V +G L + A + G + + ++ R + IEAR Sbjct: 27 YNGWGNNELQYYRRENAAVENGNLVITAKHENFGGAQYTSARMKTQGRKSFKYGKIEARI 86 Query: 164 KV-MNSTLASDVWLLSADDTQ-------EIDILEAYGADYSESAGKDHSYFSKKVHISHH 215 + L W+L + T EIDI+ + + H + H Sbjct: 87 ALPSGQGLWPAFWMLGNNITSVSWPACGEIDIMSRINN-------------ALQTHGTIH 133 Query: 216 VFIRDPFQDYQPKDAGSWFED-GTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDI 274 ++ D S+ +D G ++H + V W D +++++DG V + Sbjct: 134 WSDQN-------GDHASYGDDVGVSDPGQYHIYSVEW-DANSIKWFVDGQQFNEVDISN- 184 Query: 275 IDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTED-QTWRSSPASGLQSNTYTPTDNELS 333 ++ E I++N W + P Sbjct: 185 ---------------GVNGTGEFQNEFFILLNMAVGGDWPG----FDVDQSKLPAQ---- 221 Query: 334 NIENNTFGVDWIRIYK 349 VD++R+Y+ Sbjct: 222 ------MLVDYVRVYQ 231 >3AZZ-A nrPDB Length = 272 Score = 44.1 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 60/263 (22%) Query: 106 HNAWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITS-------KTRVVYPVY 158 W L + + ++V +G L + A ++ SD+ TS K + Y Sbjct: 40 IPGWGNGELEYYTDENAFVENGCLVIEARKEQVSDEYGTYDYTSARMTTEGKFEIKYGK- 98 Query: 159 IEARAKV-MNSTLASDVWLLSADDTQ-------EIDILEAYGAD-YSESAGKDHSYFSKK 209 IE RAK+ + +W+L + + EIDI+E G D + +S Sbjct: 99 IEIRAKLPKGKGIWPALWMLGNNIGEVGWPTCGEIDIMEMLGHDTRTVYGTAHGPGYSGG 158 Query: 210 VHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTV 269 I + + D+ +++FH F + W D +E+Y+DG L + Sbjct: 159 ASIGVAYHLPEGVPDF---------------SEDFHIFSIEW-DEDEVEWYVDGQLYHVL 202 Query: 270 SGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTD 329 S ++ E+ + +I+N Y P Sbjct: 203 SKDEL--------------AELGLEWVFDHPFFLILNV-------------AVGGYWPGY 235 Query: 330 NELSNIENNTFGVDWIRIYKPVE 352 + + +D+IR+YK + Sbjct: 236 PDETTQFPQRMYIDYIRVYKDMN 258 >1UPS-A nrPDB Length = 420 Score = 41.8 bits (96), Expect = 5e-04, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 76/245 (31%), Gaps = 62/245 (25%) Query: 66 PADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRDRSYVA 125 PA+ ++ + SD F N + EKW D+Y W K + + Sbjct: 21 PANPIEKAGYKL-DFSDEF-------NGPTLDREKWTDYYLPHWC-KDPESAKANYRFEN 71 Query: 126 DGELK-MWATRKP----GSDKINMGCITSKTR---------------------VVYPVYI 159 ++ + +KP + I S + Y Sbjct: 72 GSLVEYITEDQKPWCPEHDGTVRSSAIMSFDKSWIHNFSGTTDNHERNEWRGYTTKYGYF 131 Query: 160 EARAKVMNSTLA--SDVWLL----------SADDTQEIDILEAYGADYSESAGKDHSYFS 207 E RAK+ N+ W++ ++ T EIDILE + + + + Sbjct: 132 EIRAKLSNTGGGGHQAWWMVGMQDDTNDWFNSKQTGEIDILETFFSKKDTWRIAAYGWND 191 Query: 208 KKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVR 267 S + + D T E+H + + W P L++Y D L + Sbjct: 192 PNFQTS-----------WTISEDKVPSGDPT---SEYHIYAMEW-TPTALKFYYDNELFK 236 Query: 268 TVSGK 272 + G Sbjct: 237 VIYGS 241 >5WUT-A nrPDB Length = 235 Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 83/250 (33%), Gaps = 57/250 (22%) Query: 108 AWAGPGLTEWKRDRSYVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKV-M 166 W + + + +G+L + A ++ G+ + T + YIEARAK+ + Sbjct: 35 GWGNSERQLYTKTNHKMENGKLVITAKKE-GTQYTSTRITTQGKKEFQYGYIEARAKLPV 93 Query: 167 NSTLASDVWLLSAD-------DTQEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIR 219 + W+L ++ EIDILE G + S SH I Sbjct: 94 GKGIWPAFWMLGSNIKTVGWPQCGEIDILEYVG------KEPHMVFTSLHTTASHGNTIN 147 Query: 220 DPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKH 279 + G FH + + W +++++D +LV T + D Sbjct: 148 TKRTRIDTIEQG------------FHLYAIDWTK-DKMDFFVDNILVYTFNPTD------ 188 Query: 280 FTNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASGLQSNTYTPTDNELSNIENNT 339 + + ++ IIN P + P D Sbjct: 189 ----------KTEAIWPYDQPFYFIINMAIGGNFGGP---EVDDAIFPQD---------- 225 Query: 340 FGVDWIRIYK 349 F +D+I++Y+ Sbjct: 226 FSIDYIKVYQ 235 >4PQ9-A nrPDB Length = 257 Score = 36.4 bits (82), Expect = 0.019, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 63/200 (31%), Gaps = 26/200 (13%) Query: 66 PADAGPNMKWEFQEISDNFEYEAPADNKGSEFLEKWDDFYHNAWAGPGLT-EWKRDRSYV 124 PA G + + F + D AP +K + + + W P +++ DR V Sbjct: 20 PAPNGQSGPYLFHDEFDGPAGSAPDSSKWTVARAREEMKDPTYWERPENVGQYRDDRQNV 79 Query: 125 -ADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLAS-DVWLLSADDT 182 DG+ + G I S R EAR K T W L D Sbjct: 80 FLDGKSNLVIRAAKDGGTYYAGKIQSPWRGGIGHTWEARIKFDCLTAGCWPAWWLGNQDR 139 Query: 183 QEIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNK 242 EIDI+E YG SA H+ + W + Sbjct: 140 GEIDIIEWYGNGSWPSATTVHA----------------------KANGSEWKTRNVALDS 177 Query: 243 EFHRFGVYWRDPWHLEYYID 262 +H + W D + ++ D Sbjct: 178 GWHTWRCQW-DETGMRFWQD 196 >6JHJ-A nrPDB Length = 243 Score = 33.3 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 62/168 (36%), Gaps = 32/168 (19%) Query: 117 WKRDRSYVADGELKMWATRKP--GSDKINMGCITSKTRVVYPVYIEARAKVMNSTLAS-- 172 ++R+ + V +G L + A R+ G + + T + +EAR M S + S Sbjct: 39 YRRENATVENGNLVITAKRESIGGYNYTSTRMKTQGRKSWKYGKVEARI-AMPSFMGSWP 97 Query: 173 DVWLLSADDTQ-------EIDILEAYGADYSESAGKDHSYFSKKVHISHHVFIRDPFQDY 225 W+L + + IDI+E + + H + H +QD+ Sbjct: 98 AFWMLGDNISSVGWPACGAIDIMEHVNTEA-------------QTHGTIH------WQDH 138 Query: 226 QPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKD 273 A +H + + W D +++++DG L S + Sbjct: 139 NNTYANYSGSIPVSSVTSYHIYTIEW-DASVIKWFVDGNLYHEASIAN 185 >4XXP-A nrPDB Length = 253 Score = 33.3 bits (74), Expect = 0.18, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 61/214 (28%), Gaps = 40/214 (18%) Query: 84 FEYEAPADNKGSEFLEKWDDFYHNAWAGPGLTEWKRD----------RSYVADGELKMWA 133 F+ E + KW T W+R R+ DG+ + Sbjct: 27 FQDEFDGPAGSAPDASKW-AVAKARETIKDPTYWERPENIGQYRDDRRNVFLDGKSNLVL 85 Query: 134 TRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLAS--DVWLLSADDTQEIDILEAY 191 G + S R EAR K+ T + WL + DD EID++E Y Sbjct: 86 RAAKNGPTYYSGKVQSLWRGGVGHTWEARIKLDCLTAGAWPAYWLGN-DDQGEIDVMEWY 144 Query: 192 GADYSESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWNKEFHRFGVYW 251 G SA H+ + G W + +H + W Sbjct: 145 GNGNWPSATTVHA----------------------KANGGEWKTHNIAVDSAWHTWRCQW 182 Query: 252 RDPWHLEY---YIDGVLVRTVSGKDIIDPKHFTN 282 D + + Y+DG + F Sbjct: 183 -DEAGIRFWKDYVDGAQPYFDVPASSLPDWPFNG 215 >2QV3-A nrPDB Length = 457 Score = 31.0 bits (68), Expect = 0.89, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 18/187 (9%) Query: 123 YVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDT 182 V+ GE ++ +IN + + TR ++ + + K + + + S + Sbjct: 169 GVSVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGV--KFKSGEKLVIDEFYY-SPWNY 225 Query: 183 QEIDILEAYGADYS-ESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWN 241 + ++ S+ ++ + + K+ ++ ++ DY S F + T+ Sbjct: 226 FDARNIKNVEITRKFASSTPENPWGTSKLMFNNLTLGQNAVMDY------SQFSNLTIQG 279 Query: 242 KEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEM 301 + G + Y + G V T++ + F N D +N Sbjct: 280 DFINNQG-------TINYLVRGGKVATLNVGNAA-AMMFNNDIDSATGFYKPLIKINSAQ 331 Query: 302 DIIINTE 308 D+I NTE Sbjct: 332 DLIKNTE 338 >6NYJ-A nrPDB Length = 821 Score = 29.8 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 18/187 (9%) Query: 123 YVADGELKMWATRKPGSDKINMGCITSKTRVVYPVYIEARAKVMNSTLASDVWLLSADDT 182 V+ GE ++ +IN + + TR ++ + + K + + + S + Sbjct: 523 GVSVGEYTHFSEDIGSQSRINTVRLETGTRSIFSGGV--KFKSGEKLVIDEFYY-SPWNY 579 Query: 183 QEIDILEAYGADYS-ESAGKDHSYFSKKVHISHHVFIRDPFQDYQPKDAGSWFEDGTVWN 241 + ++ S+ ++ + + K+ ++ ++ DY S F + T+ Sbjct: 580 FDARNIKNVEITRKFASSTPENPWGTSKLMFNNLTLGQNAVMDY------SQFSNLTIQG 633 Query: 242 KEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHFTNTTDPGNTEIDTRTGLNKEM 301 + G + Y + G V T++ + F N D +N Sbjct: 634 DFINNQG-------TINYLVRGGKVATLNVGNAA-AMMFNNDIDSATGFYKPLIKINSAQ 685 Query: 302 DIIINTE 308 D+I NTE Sbjct: 686 DLIKNTE 692 >2AAA-A nrPDB Length = 484 Score = 29.1 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 34/128 (26%), Gaps = 3/128 (2%) Query: 221 PFQDYQPKDAGSWFEDGTVWNKEFHRFGVYWRDPWHLEYYIDGVLVRTVSGKDIIDPKHF 280 P + P+D W ++ + + +L+ D + R + + P H Sbjct: 64 PITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHM 123 Query: 281 TNTTDPGNTEIDTRTGLNKEMDIIINTEDQTWRSSPASG---LQSNTYTPTDNELSNIEN 337 + + + + W + + D + + Sbjct: 124 GYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVEDCWEGDTIVSLPDLDTTETAV 183 Query: 338 NTFGVDWI 345 T DW+ Sbjct: 184 RTIWYDWV 191 >2YIB-D nrPDB Length = 770 Score = 28.3 bits (61), Expect = 5.1, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 3/41 (7%) Query: 101 WDDFYHNAWAGPGLTEWKRDRSYV---ADGELKMWATRKPG 138 WD N W+ P T + +L + T+ P Sbjct: 314 WDKKTRNIWSAPYPTHLLLSMVSTPVMNESKLNITNTQTPS 354 >2YIB-A nrPDB Length = 853 Score = 28.3 bits (61), Expect = 5.5, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 3/41 (7%) Query: 101 WDDFYHNAWAGPGLTEWKRDRSYV---ADGELKMWATRKPG 138 WD N W+ P T + +L + T+ P Sbjct: 314 WDKKTRNIWSAPYPTHLLLSMVSTPVMNESKLNITNTQTPS 354 >6GAZ-Ae nrPDB Length = 390 Score = 27.5 bits (59), Expect = 7.9, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 34 QEQEQETEQEGEPEESSEQDLVEEVDWKDIPVPADAGPNMKWEFQEI 80 +EQ QE E+ EE EQ VEE + +P + ++ + Q + Sbjct: 274 EEQPQEGEESQRSEELVEQLDVEETEQSKLPQYLERFEALRSKLQAL 320 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.304 0.117 0.325 Lambda K H 0.267 0.0358 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,147,837 Number of Sequences: 36641 Number of extensions: 579812 Number of successful extensions: 1519 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 1360 Number of HSP's gapped (non-prelim): 94 length of query: 353 length of database: 10,336,785 effective HSP length: 98 effective length of query: 255 effective length of database: 6,745,967 effective search space: 1720221585 effective search space used: 1720221585 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 59 (27.5 bits)