BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q9QYB1
(253 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
2D2Z-A nrPDB 514 e-146
4K0G-A nrPDB 336 4e-93
2R5G-A nrPDB 330 4e-91
5Y7I-A nrPDB 320 4e-88
3FY7-A nrPDB 239 1e-63
2YV7-A nrPDB 117 7e-27
5IQY-A nrPDB 94 5e-20
5D9W-A nrPDB 87 6e-18
5LOL-A nrPDB 87 6e-18
5N9U-A nrPDB 82 2e-16
5ELG-A nrPDB 80 6e-16
2YV9-A nrPDB 74 9e-14
4QQ7-A nrPDB 50 7e-07
3M1G-A nrPDB 36 0.017
1FW1-A nrPDB 34 0.057
3LFL-A nrPDB 34 0.059
2CZ2-A nrPDB 33 0.14
5TX1-A nrPDB 33 0.14
3QAG-A nrPDB 33 0.16
2WCU-A nrPDB 32 0.27
4PQI-A nrPDB 32 0.31
3LG6-A nrPDB 32 0.36
2OBE-A nrPDB 31 0.39
3WD6-A nrPDB 31 0.51
4IGJ-A nrPDB 31 0.58
3ZDR-A nrPDB 30 1.1
1P2Z-A nrPDB 29 1.6
5LDN-A nrPDB 29 1.6
3BBY-A nrPDB 29 1.7
2CA8-A nrPDB 28 5.2
4YZB-A nrPDB 27 8.5
>2D2Z-A nrPDB
Length = 261
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/253 (98%), Positives = 252/253 (99%)
Query: 1 MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK 60
MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK
Sbjct: 1 MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK 60
Query: 61 RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD 120
RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD
Sbjct: 61 RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD 120
Query: 121 IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLD 180
IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTR+FLD
Sbjct: 121 IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLD 180
Query: 181 GDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
G+EMTLADCNLLPKLHIVKVVAKKYRNFDIPK MTGIWRYLTNAYSRDEFTNTCPSDKEV
Sbjct: 181 GNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
Query: 241 EIAYSDVAKRLTK 253
EIAYSDVAKRLTK
Sbjct: 241 EIAYSDVAKRLTK 253
>4K0G-A nrPDB
Length = 251
Score = 336 bits (862), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 157/238 (65%), Positives = 190/238 (79%)
Query: 14 DKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGT 73
+++P +ELFVKAGSDG IGN PFSQRLFM+LWLKGV F+VTTVD KR+ +Q L PG
Sbjct: 13 EEQPQVELFVKAGSDGAKIGNSPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGG 72
Query: 74 HPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSR 133
PF+ + +EV TD NKIEEFLE VLCPP+Y KL+ +PESNTAG+DIFAKFSAYIKNS
Sbjct: 73 QLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSN 132
Query: 134 PEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLP 193
P N+ LE+GLLK L+ LD YL SPLP+E+DE S ED S R+FLDG+E+TLADCNLLP
Sbjct: 133 PALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLP 192
Query: 194 KLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251
KLHIV+VV KKYR F IP+ G+ RYL+NAY+R+EF +TCP D+E+E+AY VAK L
Sbjct: 193 KLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 250
>2R5G-A nrPDB
Length = 247
Score = 330 bits (846), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 155/235 (65%), Positives = 195/235 (82%)
Query: 16 EPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHP 75
+P IELFVKAGSDGESIGNCPF QRLFMILWLKGV F+VTTVD+ RKP +L++LAPGT+P
Sbjct: 11 DPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNP 70
Query: 76 PFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPE 135
PF+ +N E+KTD KIEEFLE+ L PP+Y LSPK+ ES G ++FAKFSAYIKN++ E
Sbjct: 71 PFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKNTQKE 130
Query: 136 ANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKL 195
AN+ E+ LLK ++LD+YLN+PL DEID +S E+ S R FLDGD++TLADC+LLPKL
Sbjct: 131 ANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKL 190
Query: 196 HIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKR 250
+I+KV AKKYR+FDIP +G+WRYL NAY+R+EFT+TCP DKE+E Y++VAK+
Sbjct: 191 NIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAKQ 245
>5Y7I-A nrPDB
Length = 261
Score = 320 bits (820), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 151/240 (62%), Positives = 188/240 (78%), Gaps = 2/240 (0%)
Query: 11 KEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLA 70
+ DKEP IELF+KAG DGE++GNCPF QRLFM+LWLKGV F+VTTVD+++KPA+L++LA
Sbjct: 22 QSSDKEPSIELFIKAGHDGENVGNCPFCQRLFMVLWLKGVKFTVTTVDMRKKPAELKDLA 81
Query: 71 PGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIK 130
PGT+PPF+ +N +KTD KIEEFLE+ L PP+Y LSP + ES G DIFAKFSA+IK
Sbjct: 82 PGTNPPFLLYNGTLKTDFIKIEEFLEQTLAPPRYPHLSPVNKESFDVGADIFAKFSAFIK 141
Query: 131 NSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCN 190
NS N E+ LL+ ++LD+YLNSPLP+EID NS+E I S R+FLDGD +TLADCN
Sbjct: 142 NS--PNNPLQEKNLLREFKRLDDYLNSPLPEEIDHNSVETITVSNRKFLDGDRLTLADCN 199
Query: 191 LLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKR 250
LLPKLH+++V AKKY NF+IP TG+WRYL NA RDEF TCP+D E+E AY VA +
Sbjct: 200 LLPKLHVIRVAAKKYCNFEIPDHFTGVWRYLKNADERDEFKQTCPADIEIEKAYLSVANK 259
>3FY7-A nrPDB
Length = 250
Score = 239 bits (609), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/226 (51%), Positives = 154/226 (68%), Gaps = 2/226 (0%)
Query: 19 IELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFI 78
++LFVKA DGES+G+CP QRLFM+L LKGV F++TTVD +R P L++ APG+ P +
Sbjct: 26 LQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQLPIL 85
Query: 79 TFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANE 138
++S+ KTD +IE+FLEE L PP + L+P++ ESNTAG D+F KFSA+IKN P +E
Sbjct: 86 LYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPAQDE 145
Query: 139 ALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIV 198
AL + LL+ L +LD YL +PL E+ ++ S RRFLDGD +TLADC+LLPKLHIV
Sbjct: 146 ALYQQLLRALARLDSYLRAPLEHEL--AGEPQLRESRRRFLDGDRLTLADCSLLPKLHIV 203
Query: 199 KVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAY 244
V +R IP + G+ RYL +A EF TCP E+ AY
Sbjct: 204 DTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAAY 249
>2YV7-A nrPDB
Length = 260
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 114/229 (49%), Gaps = 27/229 (11%)
Query: 17 PLIELFVKAGS-DGESIGNCPFSQRLFMILWL----KGVVFSVTTVDLKRKPADLQNLAP 71
P IEL +KA + DG G C F Q FM L+L K + VTTVD+++ P D +
Sbjct: 21 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFE 80
Query: 72 GTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKN 131
THPP + N + KIE + + + P L + E T +++ K +
Sbjct: 81 ATHPPILIDNGLAILENEKIERHIMKNI--PGGYNLFVQDKEVATLIENLYVKLKLML-- 136
Query: 132 SRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNL 191
+ +EA LL L+K++++L++ RFL GD M DC L
Sbjct: 137 --VKKDEAKNNALLSHLRKINDHLSA----------------RNTRFLTGDTMCCFDCEL 178
Query: 192 LPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
+P+L ++V K + +F+IP +T +WRY+ + Y D FT +CP+D+++
Sbjct: 179 MPRLQHIRVAGKYFVDFEIPTHLTALWRYMYHMYQLDAFTQSCPADQDI 227
>5IQY-A nrPDB
Length = 216
Score = 94.0 bits (232), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 25/222 (11%)
Query: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPP 76
+E+ VKA I G+CPFSQR+ + L K + + + VDL KP ++P G P
Sbjct: 6 VEVCVKAAVGAPDILGDCPFSQRVLLTLEEKKITYEMKLVDLSNKPEWFLKISPEGKVPV 65
Query: 77 FITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEA 136
F + + + D + I + +EE P + +P PE + G IF F ++K+ +A
Sbjct: 66 FNSGDGKWIADSDVITQVIEEKFPTPSLV--TP--PEYASVGSKIFPSFVKFLKSK--DA 119
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
++ E+ LL LQ LDE+L + P ++ G+ ++ AD +L PKL
Sbjct: 120 SDGSEKALLDELQALDEHLKAHGP-----------------YISGENVSAADLSLGPKLF 162
Query: 197 IVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDK 238
++V + ++ + IP+ +T + Y +SR+ F T P+++
Sbjct: 163 HLQVALEHFKGWKIPENLTSVHAYTKALFSRESFVKTKPANQ 204
>5D9W-A nrPDB
Length = 230
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 25/217 (11%)
Query: 19 IELFVKAG-SDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPP 76
+E+ VKA +++G+ PFSQR+ + L K V + + +D++ KP ++P G P
Sbjct: 20 VEVCVKAAVGHPDTLGDSPFSQRVLLTLEEKKVPYEMKLIDVQNKPDWFLKISPEGKVPV 79
Query: 77 FITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEA 136
F + + D + I + +EE P + +P PE + G IF+ F+ ++K+ P
Sbjct: 80 FNGGDGKWIPDSDVITQVIEEKYPTPSLV--TP--PEYASVGSKIFSCFTTFLKSKDP-- 133
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
N+ E+ LL LQ L+E+L + P F++G ++ AD +L PKL+
Sbjct: 134 NDGSEKALLTELQALEEHLKAHGP-----------------FINGQNISAADLSLAPKLY 176
Query: 197 IVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNT 233
++V + ++ + IP+ +T + Y +SR+ F T
Sbjct: 177 HLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKT 213
>5LOL-A nrPDB
Length = 215
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 32 IGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKI 91
+G+CPFSQR+ + L K + + +++ KP +++P P + + + D + I
Sbjct: 19 LGDCPFSQRVLLTLEEKKLPYKTHLINVSDKPQWFLDISPEGKVPVVKLDGKWVADSDVI 78
Query: 92 EEFLEEVLCPPKYLKLSPKHP-ESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQK 150
LEE KY + S K P E + G IF F ++K+ +AN+ E+ L+ L+
Sbjct: 79 VGLLEE-----KYPEPSLKTPPEFASVGSKIFGAFVTFLKSK--DANDGSEKALVDELEA 131
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDI 210
L+ +L K + F+ G+++T D +L PKL+ ++V Y+N+ +
Sbjct: 132 LENHL----------------KTHSGPFVAGEKITAVDLSLAPKLYHLEVALGHYKNWSV 175
Query: 211 PKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
P+ +T + Y +SR+ F NT + KE+ +A
Sbjct: 176 PESLTSVRNYAKALFSRESFENT-KAKKEIVVA 207
>5N9U-A nrPDB
Length = 218
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 24/223 (10%)
Query: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPF 77
+E+ VKA +I G+CPF QR+ + L K + + ++L KP ++P P
Sbjct: 3 LEICVKAAVGAPNILGDCPFCQRVLLSLEEKKIPYKSHLINLGDKPQWFLEISPEGKVPV 62
Query: 78 ITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEAN 137
+ + + D + I LEE P +P PE + G IF F ++K+ P N
Sbjct: 63 VKIDDKWVADSDVIVGILEEKNPEPPLA--TP--PEFASVGSKIFPSFVKFLKSKDP--N 116
Query: 138 EALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHI 197
+ E+ LL+ L+ LD +L P F+ G+++T D +L PKL+
Sbjct: 117 DGTEQALLEELKALDGHLKVHGP-----------------FIAGEKITAVDLSLAPKLYH 159
Query: 198 VKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
++V ++N+ IP +T + Y+ +SR+ F T +++ V
Sbjct: 160 LEVALGHFKNWPIPDNLTHVLNYIKLLFSRESFKKTRAAEEHV 202
>5ELG-A nrPDB
Length = 221
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 19 IELFVKAGSDG-ESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPF 77
+E+ VKA + +G+CPFSQR + L K + + + ++L KP +++P P
Sbjct: 3 LEICVKAAVGAPDHLGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPV 62
Query: 78 ITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHP-ESNTAGMDIFAKFSAYIKNSRPEA 136
+ + + TD + I LEE KY K P E + G +IF F ++K+ ++
Sbjct: 63 LKIDDKWVTDSDVIVGILEE-----KYPDPPLKTPAEFASVGSNIFGTFGTFLKSK--DS 115
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
N+ E LL L+ L+ +L S F+ G+ ++ D +L PKL+
Sbjct: 116 NDGSEHALLVELEALENHLKS----------------HDGPFIAGERVSAVDLSLAPKLY 159
Query: 197 IVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
++V ++++ +P+ + Y+ +S D F T +K V
Sbjct: 160 HLQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYV 203
>2YV9-A nrPDB
Length = 291
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 43/269 (15%)
Query: 1 MALSMPLNGLKEEDKEPLIELFVKA-GSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDL 59
MA + + + +PL+EL+VKA G D IG F Q +M L+ ++ + +
Sbjct: 2 MAEAYQIQSNGDPQSKPLLELYVKASGIDARRIGADLFCQEFWMELY---ALYEIGVARV 58
Query: 60 KRKPADLQNLA-----PGTHPPFI---------TFNSEVKTDVNKIEEFLEEVLCPPKYL 105
+ K ++ + A G PP + T N E++ +I +E P
Sbjct: 59 EVKTVNVNSEAFKKNFLGAQPPIMIEEEKELTYTDNREIE---GRIFHLAKEFNVP---- 111
Query: 106 KLSPKHPESNTAGMDIFAKFSAYIK--------NSRPEANEALERGLLKTLQKLDEYLNS 157
L K P + +++ F +++ P E L + ++ E L++
Sbjct: 112 -LFEKDPSAEKRIENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSN 170
Query: 158 PLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGI 217
ID+ E R+L G+ MT DC L+P+LH ++++ FDIP T +
Sbjct: 171 -----IDQLLSE----RKSRYLLGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHL 221
Query: 218 WRYLTNAYSRDEFTNTCPSDKEVEIAYSD 246
W Y+ AY F +CP+D+++ Y +
Sbjct: 222 WAYILTAYRTAAFIESCPADQDIIHHYKE 250
>4QQ7-A nrPDB
Length = 207
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 18/207 (8%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEE 93
CPFSQR ++L+ KG+ F + VDL KP D+ + P P + + + N I E
Sbjct: 13 TCPFSQRCRLVLFEKGMDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINE 72
Query: 94 FLEEVLCPPKYLKLSP-KHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLD 152
+++E P+ + P + + ++ + ++ E +A E+ K +
Sbjct: 73 YIDERFPHPQLMPADPVQRARARLFLLNFEKELFVHVSTLENEKGKAAEKNHEKARLAIR 132
Query: 153 EYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPK 212
+ L P F +++ G+E ++ D + P L + + ++ K
Sbjct: 133 DRLTQLAP-----------IFVKNKYMLGEEFSMLDVAIAPLLWRL-----DHYGIELSK 176
Query: 213 GMTGIWRYLTNAYSRDEFTNT-CPSDK 238
+ +Y +SR + PS+K
Sbjct: 177 NAAPLMKYAERIFSRPAYIEALTPSEK 203
>3M1G-A nrPDB
Length = 362
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 168 MEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKG----MTGIWRYLTN 223
+ED + STRR+L GD +T AD L P L V+ A + +F + M +W YL +
Sbjct: 226 LED-RLSTRRYLMGDHITEADIRLYPTL--VRFDAVYHGHFKCGRNKITEMPNLWGYLRD 282
Query: 224 AYSRDEFTNTC 234
+ F +T
Sbjct: 283 LFQTPGFGDTT 293
>1FW1-A nrPDB
Length = 216
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 22/167 (13%)
Query: 38 SQRLFMILWLKGVVFSVTTVDL-----KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIE 92
S R+ + L LKG+ + ++L ++ D Q L P P + + I
Sbjct: 17 SWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAII 76
Query: 93 EFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLD 152
E+LEE P+ L PK S D+ A ++N L L+++
Sbjct: 77 EYLEETRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQN-------------LSVLKQVG 123
Query: 153 EYLNSPLPDE---IDENSMEDIKFSTRR-FLDGDEMTLADCNLLPKL 195
E + N++E I ST + GDE+T+AD L+P++
Sbjct: 124 EEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQV 170
>3LFL-A nrPDB
Length = 240
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 8/181 (4%)
Query: 31 SIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVN 89
S+ CPF++R ++L KG+ V ++LK KP P G P ++ +
Sbjct: 28 SMRFCPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESA 87
Query: 90 KIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAK----FSAYIKNSRPEANEALERGLL 145
E+L+E K L P +++F+K ++I++ E L+
Sbjct: 88 ITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFR 147
Query: 146 KTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDE-MTLADC-NLLPKLHIVKVVAK 203
K KL E L + NS+ I + + + E M L +C + PKL + K
Sbjct: 148 KEFTKL-EVLTNKKTTFFGGNSISMIDYLIWPWFERLEAMKLNECVDHTPKLKLWMAAMK 206
Query: 204 K 204
+
Sbjct: 207 E 207
>2CZ2-A nrPDB
Length = 223
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Query: 38 SQRLFMILWLKGVVFSVTTVDLKRKPA-----DLQNLAPGTHPPFITFNSEVKTDVNKIE 92
S R+ + L LKG+ + + ++L + + Q L P P + + I
Sbjct: 24 SWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLNPMKQVPALKIDGITIVQSLAIM 83
Query: 93 EFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNS-RPEANEAL--ERGLLKTLQ 149
E+LEE P+ L P+ P+ I S I + +P N ++ + G +Q
Sbjct: 84 EYLEETRPIPRLL---PQDPQKRA----IVRMISDLIASGIQPLQNLSVLKQVGQENQMQ 136
Query: 150 KLDEYLNSPLPDEIDENSMEDIKFSTR-RFLDGDEMTLADCNLLPKL 195
+ + S N++E I ST ++ GDE+++AD L+P++
Sbjct: 137 WAQKVITSGF------NALEKILQSTAGKYCVGDEVSMADVCLVPQV 177
>5TX1-A nrPDB
Length = 952
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 172 KFSTRRFLDGDEMTLADCNLLPKLHIVKVVAK---KYRNFDIPKGMTGIWRYLTNAYSRD 228
+F +R +DG+ +A CN+ +V++++ Y+ F +P+G Y YS
Sbjct: 742 EFEIKRSVDGEGYNVAQCNMTKDWFLVQMLSHYNIGYQGFHVPEG------YKDRMYSF- 794
Query: 229 EFTNTCPSDKEV--EIAYSD 246
F N P ++V EI Y D
Sbjct: 795 -FRNFQPMSRQVVDEINYKD 813
>3QAG-A nrPDB
Length = 239
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 12/164 (7%)
Query: 31 SIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFI-TFNSEVKTDVN 89
S+ CP+S R ++L K + V ++L+ KP P H P + T S++ +
Sbjct: 28 SMRFCPYSHRTRLVLKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQSQLIYESV 87
Query: 90 KIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQ 149
E+L++ K P +++F+K K E AL G T
Sbjct: 88 IACEYLDDAYPGRKLFPYDPYERARQKMLLELFSKVPHLTK----ECLVALRSGREST-- 141
Query: 150 KLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLP 193
L + L E N E +++ F G +++ D L P
Sbjct: 142 ----NLKAALRQEFS-NLEEILEYQNTTFFGGTSISMIDYLLWP 180
>2WCU-A nrPDB
Length = 149
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 170 DIKFSTRRFLDGDEMTLADCNLLPKLHIVKV--VAKKYRNFDIPKGMTGIWRYL---TNA 224
++ F+ R GDE+ LAD N P I + V + DIP+ + + R L T
Sbjct: 14 ELLFALARMGHGDEIVLADAN-FPTSSICQCGPVEIRADGLDIPQLLEAVLRLLPLDTYV 72
Query: 225 YSRDEFTNTCPSDKE 239
S + PSDKE
Sbjct: 73 ESPAAVMDLVPSDKE 87
>4PQI-A nrPDB
Length = 241
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 21/210 (10%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDL--KRKPADL-QNLAPGTHPPFITFNSEVKTDVNK 90
CPF+QR+++ KG+ + V L + +PA + + P P + N ++ +
Sbjct: 40 TCPFAQRVWITRNFKGLQDEIKLVPLILQNRPAWYPEKVYPPNKVPSLEHNGKITGESLD 99
Query: 91 IEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQK 150
+ ++LE P L PK P ++F+ Y A + L K
Sbjct: 100 LIKYLESNFEGPSLL---PKDPAKKEFAEELFS----YTDKFNGTVYTAFKGDLAKEAGP 152
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDI 210
++L EN++ KF F G E +L D +P + + + + +DI
Sbjct: 153 AFDHL---------ENALH--KFDDGPFFLGKEFSLVDIAYIPFVERLNIFLLEVFKYDI 201
Query: 211 PKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
G + ++ + + T KE+
Sbjct: 202 TAGRQKLAAWIEEVNKIEAYKQTKTDPKEL 231
>3LG6-A nrPDB
Length = 235
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 171 IKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPK 212
++ S RF GDE+TLAD L+P + + V F I K
Sbjct: 165 LELSAGRFCVGDEITLADVCLVPAVWAAERVGMDLARFPITK 206
>2OBE-A nrPDB
Length = 932
Score = 31.2 bits (69), Expect = 0.39, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 172 KFSTRRFLDGDEMTLADCNLLPKLHIVKVVAK---KYRNFDIPKGMTGIWRYLTNAYSRD 228
+F +R +DG+ +A CN+ +V+++A Y+ F +P+G Y YS
Sbjct: 722 EFEIKRTVDGEGYNVAQCNMTKDWFLVQMLAHYNIGYQGFYVPEG------YKDRMYSF- 774
Query: 229 EFTNTCPSDKEV--EIAYSD 246
F N P ++V E+ Y D
Sbjct: 775 -FRNFQPMSRQVVDEVNYKD 793
>3WD6-A nrPDB
Length = 256
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 78/194 (40%), Gaps = 22/194 (11%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIE-- 92
CP++QR + L K + + V +DL KP L + P I E+ DV E
Sbjct: 38 CPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAI----EIAEDVTIYESL 93
Query: 93 ---EFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQ 149
E+L+EV PK L P+ P A I + SA I ++L +LK
Sbjct: 94 VTVEYLDEVY--PK-RPLLPQDP-LKKALDKIIVEASAPI--------QSLFIKILKFSD 141
Query: 150 KLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFD 209
++E + +D E +K FLDG E AD + P ++ A R
Sbjct: 142 TVNEEHVAAYHKALD-FIQEQLKNRGTVFLDGSEPGYADYMIWPWFERLRAFAHDERVRL 200
Query: 210 IPKGMTGIWRYLTN 223
P + + Y+ N
Sbjct: 201 EPSKYSLLLEYIDN 214
>4IGJ-A nrPDB
Length = 242
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 38 SQRLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVKTDV----NK 90
+ R+ + L LKG+ + VDL ++ A Q P + P + + +T +
Sbjct: 36 AWRVRLGLALKGLAYEYRAVDLLAQEQFQAAHQARNPMSQVPVLEVEEDGRTHLLVQSMA 95
Query: 91 IEEFLEEVLCPPKYLKLSPKHPESNTAGMDIF--AKFSAYIKN----SRPEANEALERGL 144
I E+LEE +HPE D++ A+ A ++ ++P N + R L
Sbjct: 96 ILEWLEE------------RHPEPALLPPDLWGRARVRALAEHVNSGTQPMQNALVLRML 143
Query: 145 LKTLQKLD-EYLNSPLPDEID--ENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
+ + D E+ + + E ++ D RF GD TLADC L+P+L+
Sbjct: 144 REKVPGWDREWARFFIARGLAALETAVRD---GAGRFSHGDAPTLADCYLVPQLY 195
>3ZDR-A nrPDB
Length = 433
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 99 LCPPKYLKLSPKHPESNTAGMDIFAK-FSAYIKNSRPEANEALERGLLKTLQKLDEYLNS 157
+ P+++ PKH ++T GMD+ AY+ N AN+ + +K +Q + EYL
Sbjct: 205 IVDPQFVMTVPKHVTADT-GMDVLTHAIEAYVSNM---ANDYTDGLAMKAIQLVFEYLPR 260
Query: 158 PLPDEIDENSMEDI 171
+ DE + E +
Sbjct: 261 AYQNGADELAREKM 274
>1P2Z-A nrPDB
Length = 967
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 172 KFSTRRFLDGDEMTLADCNLLPKLHIVKVVAK---KYRNFDIPK 212
+F +R +DG+ +A CN+ +V+++A Y+ F IP+
Sbjct: 757 EFEIKRSVDGEGYNVAQCNMTKDWFLVQMLANYNIGYQGFYIPE 800
>5LDN-A nrPDB
Length = 927
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 172 KFSTRRFLDGDEMTLADCNLLPKLHIVKVVAK---KYRNFDIPK 212
+F +R +DG+ +A CN+ +V+++A Y+ F IP+
Sbjct: 722 EFEIKRSVDGEGYNVAQCNMTKDWFLVQMLANYNIGYQGFYIPE 765
>3BBY-A nrPDB
Length = 215
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVKTDVNKI 91
P+ ++ L KG+ F + T+DL + Q P + + ++ + I
Sbjct: 17 SPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAI 76
Query: 92 EEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAY---IKNSRP 134
E+LE+ PP + ++ P E+ I A + I+ RP
Sbjct: 77 AEYLEDRFAPPTWERIYPLDLENRARARQIQAWLRSDLMPIREERP 122
>2CA8-A nrPDB
Length = 211
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 138 EALERGLLKTLQK--------LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADC 189
E LE KTL K + E LN +P +D E +K ST + GD++TLAD
Sbjct: 103 EDLEHEYYKTLMKPEEEKQKIIKEILNGKVPVLLD-IICESLKASTGKLAVGDKVTLADL 161
Query: 190 NLL 192
L+
Sbjct: 162 VLI 164
>4YZB-A nrPDB
Length = 491
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 109 PKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSM 168
P+ + + D+ K AY+ R A +ALE LKT D ID S+
Sbjct: 253 PQWKKVSEPAKDLIRKMLAYVPTMRISARDALEHEWLKT--------TDAATDSIDVPSL 304
Query: 169 EDIKFSTRRF 178
E + R+F
Sbjct: 305 ESTILNIRQF 314
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
2D2Z-A nrPDB 367 e-102
5Y7I-A nrPDB 327 4e-90
2R5G-A nrPDB 324 3e-89
4K0G-A nrPDB 321 2e-88
3FY7-A nrPDB 279 8e-76
5IQY-A nrPDB 239 9e-64
5N9U-A nrPDB 237 3e-63
5D9W-A nrPDB 233 4e-62
5ELG-A nrPDB 233 6e-62
2YV7-A nrPDB 233 7e-62
2YV9-A nrPDB 231 3e-61
5LOL-A nrPDB 227 4e-60
4QQ7-A nrPDB 186 8e-48
Sequences not found previously or not previously below threshold:
3LFL-A nrPDB 81 4e-16
4PQI-A nrPDB 79 1e-15
2CZ2-A nrPDB 76 2e-14
3QAG-A nrPDB 73 1e-13
1FW1-A nrPDB 71 4e-13
4J2F-A nrPDB 71 4e-13
2VO4-A nrPDB 69 2e-12
4CHS-A nrPDB 68 4e-12
5J5N-A nrPDB 68 5e-12
3WD6-A nrPDB 67 7e-12
1AW9-A nrPDB 64 5e-11
1E6B-A nrPDB 61 4e-10
5NR1-A nrPDB 61 5e-10
4AGS-A nrPDB 60 1e-09
3UBL-A nrPDB 59 2e-09
2JL4-A nrPDB 59 3e-09
3IBH-A nrPDB 56 1e-08
3R2Q-A nrPDB 54 8e-08
5EY6-A nrPDB 53 1e-07
5F07-A nrPDB 52 2e-07
5F06-A nrPDB 52 3e-07
4IGJ-A nrPDB 51 4e-07
1GWC-A nrPDB 51 6e-07
4RI7-A nrPDB 51 7e-07
1OYJ-A nrPDB 50 9e-07
1PN9-A nrPDB 50 1e-06
3LG6-A nrPDB 49 1e-06
4MK3-A nrPDB 49 2e-06
3BBY-A nrPDB 49 2e-06
3RBT-A nrPDB 49 2e-06
6F05-A nrPDB 49 2e-06
2PMT-A nrPDB 49 3e-06
1JLV-A nrPDB 48 4e-06
5F05-A nrPDB 48 5e-06
3MAK-A nrPDB 47 6e-06
5ZWP-A nrPDB 46 1e-05
3M1G-A nrPDB 46 2e-05
3NIV-A nrPDB 46 2e-05
5F0G-A nrPDB 46 2e-05
1F2E-A nrPDB 45 3e-05
6JWK-A nrPDB 44 5e-05
4PXO-A nrPDB 44 5e-05
2GDR-A nrPDB 44 5e-05
1AXD-A nrPDB 44 7e-05
4PTS-A nrPDB 43 1e-04
5A5K-A nrPDB 43 1e-04
3IR4-A nrPDB 43 1e-04
1U3I-A nrPDB 42 2e-04
6N0I-A nrPDB 42 2e-04
2GLR-A nrPDB 42 2e-04
2CA8-A nrPDB 42 2e-04
1V2A-A nrPDB 42 2e-04
3VWX-A nrPDB 42 3e-04
3PR8-A nrPDB 41 5e-04
6GZF-A nrPDB 40 0.001
18GS-A nrPDB 38 0.003
2C3Q-A nrPDB 38 0.003
1G6W-A nrPDB 37 0.006
4MDC-A nrPDB 36 0.019
4FN5-A nrPDB 36 0.021
4USS-A nrPDB 35 0.030
2IL3-A nrPDB 35 0.037
4LMW-A nrPDB 34 0.048
2PVQ-A nrPDB 34 0.057
2PPQ-A nrPDB 34 0.077
4FQU-A nrPDB 32 0.23
3PL2-A nrPDB 31 0.48
2PBJ-A nrPDB 31 0.50
6GCB-A nrPDB 31 0.64
3QMX-A nrPDB 30 0.95
4G0L-A nrPDB 29 1.6
6A94-A nrPDB 29 2.8
4IP6-A nrPDB 27 6.0
>2D2Z-A nrPDB
Length = 261
Score = 367 bits (941), Expect = e-102, Method: Composition-based stats.
Identities = 250/253 (98%), Positives = 252/253 (99%)
Query: 1 MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK 60
MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK
Sbjct: 1 MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK 60
Query: 61 RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD 120
RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD
Sbjct: 61 RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD 120
Query: 121 IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLD 180
IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTR+FLD
Sbjct: 121 IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLD 180
Query: 181 GDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
G+EMTLADCNLLPKLHIVKVVAKKYRNFDIPK MTGIWRYLTNAYSRDEFTNTCPSDKEV
Sbjct: 181 GNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
Query: 241 EIAYSDVAKRLTK 253
EIAYSDVAKRLTK
Sbjct: 241 EIAYSDVAKRLTK 253
>5Y7I-A nrPDB
Length = 261
Score = 327 bits (837), Expect = 4e-90, Method: Composition-based stats.
Identities = 151/240 (62%), Positives = 188/240 (78%), Gaps = 2/240 (0%)
Query: 11 KEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLA 70
+ DKEP IELF+KAG DGE++GNCPF QRLFM+LWLKGV F+VTTVD+++KPA+L++LA
Sbjct: 22 QSSDKEPSIELFIKAGHDGENVGNCPFCQRLFMVLWLKGVKFTVTTVDMRKKPAELKDLA 81
Query: 71 PGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIK 130
PGT+PPF+ +N +KTD KIEEFLE+ L PP+Y LSP + ES G DIFAKFSA+IK
Sbjct: 82 PGTNPPFLLYNGTLKTDFIKIEEFLEQTLAPPRYPHLSPVNKESFDVGADIFAKFSAFIK 141
Query: 131 NSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCN 190
NS N E+ LL+ ++LD+YLNSPLP+EID NS+E I S R+FLDGD +TLADCN
Sbjct: 142 NS--PNNPLQEKNLLREFKRLDDYLNSPLPEEIDHNSVETITVSNRKFLDGDRLTLADCN 199
Query: 191 LLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKR 250
LLPKLH+++V AKKY NF+IP TG+WRYL NA RDEF TCP+D E+E AY VA +
Sbjct: 200 LLPKLHVIRVAAKKYCNFEIPDHFTGVWRYLKNADERDEFKQTCPADIEIEKAYLSVANK 259
>2R5G-A nrPDB
Length = 247
Score = 324 bits (830), Expect = 3e-89, Method: Composition-based stats.
Identities = 155/237 (65%), Positives = 195/237 (82%)
Query: 14 DKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGT 73
+P IELFVKAGSDGESIGNCPF QRLFMILWLKGV F+VTTVD+ RKP +L++LAPGT
Sbjct: 9 QVDPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGT 68
Query: 74 HPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSR 133
+PPF+ +N E+KTD KIEEFLE+ L PP+Y LSPK+ ES G ++FAKFSAYIKN++
Sbjct: 69 NPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFAKFSAYIKNTQ 128
Query: 134 PEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLP 193
EAN+ E+ LLK ++LD+YLN+PL DEID +S E+ S R FLDGD++TLADC+LLP
Sbjct: 129 KEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLP 188
Query: 194 KLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKR 250
KL+I+KV AKKYR+FDIP +G+WRYL NAY+R+EFT+TCP DKE+E Y++VAK+
Sbjct: 189 KLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENTYANVAKQ 245
>4K0G-A nrPDB
Length = 251
Score = 321 bits (822), Expect = 2e-88, Method: Composition-based stats.
Identities = 157/238 (65%), Positives = 190/238 (79%)
Query: 14 DKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGT 73
+++P +ELFVKAGSDG IGN PFSQRLFM+LWLKGV F+VTTVD KR+ +Q L PG
Sbjct: 13 EEQPQVELFVKAGSDGAKIGNSPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGG 72
Query: 74 HPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSR 133
PF+ + +EV TD NKIEEFLE VLCPP+Y KL+ +PESNTAG+DIFAKFSAYIKNS
Sbjct: 73 QLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSN 132
Query: 134 PEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLP 193
P N+ LE+GLLK L+ LD YL SPLP+E+DE S ED S R+FLDG+E+TLADCNLLP
Sbjct: 133 PALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLP 192
Query: 194 KLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251
KLHIV+VV KKYR F IP+ G+ RYL+NAY+R+EF +TCP D+E+E+AY VAK L
Sbjct: 193 KLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKAL 250
>3FY7-A nrPDB
Length = 250
Score = 279 bits (713), Expect = 8e-76, Method: Composition-based stats.
Identities = 119/244 (48%), Positives = 160/244 (65%), Gaps = 4/244 (1%)
Query: 2 ALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKR 61
AL + G + + ++LFVKA DGES+G+CP QRLFM+L LKGV F++TTVD +R
Sbjct: 11 ALEVLFQGPGMAETK--LQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRR 68
Query: 62 KPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDI 121
P L++ APG+ P + ++S+ KTD +IE+FLEE L PP + L+P++ ESNTAG D+
Sbjct: 69 SPDVLKDFAPGSQLPILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDV 128
Query: 122 FAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDG 181
F KFSA+IKN P +EAL + LL+ L +LD YL +PL E+ ++ S RRFLDG
Sbjct: 129 FHKFSAFIKNPVPAQDEALYQQLLRALARLDSYLRAPLEHEL--AGEPQLRESRRRFLDG 186
Query: 182 DEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVE 241
D +TLADC+LLPKLHIV V +R IP + G+ RYL +A EF TCP E+
Sbjct: 187 DRLTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEIL 246
Query: 242 IAYS 245
AY
Sbjct: 247 AAYR 250
>5IQY-A nrPDB
Length = 216
Score = 239 bits (609), Expect = 9e-64, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 25/229 (10%)
Query: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPP- 76
+E+ VKA I G+CPFSQR+ + L K + + + VDL KP ++P P
Sbjct: 6 VEVCVKAAVGAPDILGDCPFSQRVLLTLEEKKITYEMKLVDLSNKPEWFLKISPEGKVPV 65
Query: 77 FITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEA 136
F + + + D + I + +EE P + PE + G IF F ++K+ +A
Sbjct: 66 FNSGDGKWIADSDVITQVIEEKFPTPSLVTP----PEYASVGSKIFPSFVKFLKSK--DA 119
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
++ E+ LL LQ LDE+L + P ++ G+ ++ AD +L PKL
Sbjct: 120 SDGSEKALLDELQALDEHLKAHGP-----------------YISGENVSAADLSLGPKLF 162
Query: 197 IVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
++V + ++ + IP+ +T + Y +SR+ F T P+++ + ++
Sbjct: 163 HLQVALEHFKGWKIPENLTSVHAYTKALFSRESFVKTKPANQYLIAGWA 211
>5N9U-A nrPDB
Length = 218
Score = 237 bits (605), Expect = 3e-63, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPF 77
+E+ VKA +I G+CPF QR+ + L K + + ++L KP ++P P
Sbjct: 3 LEICVKAAVGAPNILGDCPFCQRVLLSLEEKKIPYKSHLINLGDKPQWFLEISPEGKVPV 62
Query: 78 ITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEAN 137
+ + + D + I LEE P PE + G IF F ++K+ P N
Sbjct: 63 VKIDDKWVADSDVIVGILEEKNPEPPLATP----PEFASVGSKIFPSFVKFLKSKDP--N 116
Query: 138 EALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHI 197
+ E+ LL+ L+ LD +L P F+ G+++T D +L PKL+
Sbjct: 117 DGTEQALLEELKALDGHLKVHGP-----------------FIAGEKITAVDLSLAPKLYH 159
Query: 198 VKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
++V ++N+ IP +T + Y+ +SR+ F T +++ V +
Sbjct: 160 LEVALGHFKNWPIPDNLTHVLNYIKLLFSRESFKKTRAAEEHVIAGWE 207
>5D9W-A nrPDB
Length = 230
Score = 233 bits (595), Expect = 4e-62, Method: Composition-based stats.
Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 25/229 (10%)
Query: 19 IELFVKAGSD-GESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPP- 76
+E+ VKA +++G+ PFSQR+ + L K V + + +D++ KP ++P P
Sbjct: 20 VEVCVKAAVGHPDTLGDSPFSQRVLLTLEEKKVPYEMKLIDVQNKPDWFLKISPEGKVPV 79
Query: 77 FITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEA 136
F + + D + I + +EE P + PE + G IF+ F+ ++K+ P
Sbjct: 80 FNGGDGKWIPDSDVITQVIEEKYPTPSLVTP----PEYASVGSKIFSCFTTFLKSKDP-- 133
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
N+ E+ LL LQ L+E+L + P F++G ++ AD +L PKL+
Sbjct: 134 NDGSEKALLTELQALEEHLKAHGP-----------------FINGQNISAADLSLAPKLY 176
Query: 197 IVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
++V + ++ + IP+ +T + Y +SR+ F T + + + ++
Sbjct: 177 HLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKTKAAKEHLIAGWA 225
>5ELG-A nrPDB
Length = 221
Score = 233 bits (594), Expect = 6e-62, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 19 IELFVKAGSDGE-SIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPF 77
+E+ VKA +G+CPFSQR + L K + + + ++L KP +++P P
Sbjct: 3 LEICVKAAVGAPDHLGDCPFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPV 62
Query: 78 ITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEAN 137
+ + + TD + I LEE P + E + G +IF F ++K+ ++N
Sbjct: 63 LKIDDKWVTDSDVIVGILEEKYPDPPLKTPA----EFASVGSNIFGTFGTFLKSK--DSN 116
Query: 138 EALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHI 197
+ E LL L+ L+ +L S F+ G+ ++ D +L PKL+
Sbjct: 117 DGSEHALLVELEALENHLKSH----------------DGPFIAGERVSAVDLSLAPKLYH 160
Query: 198 VKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
++V ++++ +P+ + Y+ +S D F T +K V ++
Sbjct: 161 LQVALGHFKSWSVPESFPHVHNYMKTLFSLDSFEKTKTEEKYVISGWA 208
>2YV7-A nrPDB
Length = 260
Score = 233 bits (593), Expect = 7e-62, Method: Composition-based stats.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 27/234 (11%)
Query: 17 PLIELFVKAGS-DGESIGNCPFSQRLFMILWL----KGVVFSVTTVDLKRKPADLQNLAP 71
P IEL +KA + DG G C F Q FM L+L K + VTTVD+++ P D +
Sbjct: 21 PEIELIIKASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFE 80
Query: 72 GTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKN 131
THPP + N + KIE + + + P L + E T +++ K +
Sbjct: 81 ATHPPILIDNGLAILENEKIERHIMKNI--PGGYNLFVQDKEVATLIENLYVKLKLML-- 136
Query: 132 SRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNL 191
+ +EA LL L+K++++L++ RFL GD M DC L
Sbjct: 137 --VKKDEAKNNALLSHLRKINDHLSA----------------RNTRFLTGDTMCCFDCEL 178
Query: 192 LPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
+P+L ++V K + +F+IP +T +WRY+ + Y D FT +CP+D+++ Y
Sbjct: 179 MPRLQHIRVAGKYFVDFEIPTHLTALWRYMYHMYQLDAFTQSCPADQDIINHYK 232
>2YV9-A nrPDB
Length = 291
Score = 231 bits (588), Expect = 3e-61, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 112/272 (41%), Gaps = 37/272 (13%)
Query: 1 MALSMPLNGLKEEDKEPLIELFVKA-GSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDL 59
MA + + + +PL+EL+VKA G D IG F Q +M L+ ++ + +
Sbjct: 2 MAEAYQIQSNGDPQSKPLLELYVKASGIDARRIGADLFCQEFWMELY---ALYEIGVARV 58
Query: 60 KRKPAD-----LQNLAPGTHPPFITFNSEVKTDVN------KIEEFLEEVLCPPKYLKLS 108
+ K + + G PP + + T + +I +E P L
Sbjct: 59 EVKTVNVNSEAFKKNFLGAQPPIMIEEEKELTYTDNREIEGRIFHLAKEFNVP-----LF 113
Query: 109 PKHPESNTAGMDIFAKFSAYIK--------NSRPEANEALERGLLKTLQKLDEYLNSPLP 160
K P + +++ F +++ P E L + ++ E L++
Sbjct: 114 EKDPSAEKRIENLYRNFKLFLRAKVEFDKGKKEPSRVEDLPAQIKVHYNRVCEQLSN--- 170
Query: 161 DEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRY 220
ID+ E R+L G+ MT DC L+P+LH ++++ FDIP T +W Y
Sbjct: 171 --IDQLLSE----RKSRYLLGNSMTEYDCELMPRLHHIRIIGLSLLGFDIPHNFTHLWAY 224
Query: 221 LTNAYSRDEFTNTCPSDKEVEIAYSDVAKRLT 252
+ AY F +CP+D+++ Y + T
Sbjct: 225 ILTAYRTAAFIESCPADQDIIHHYKEQMNLFT 256
>5LOL-A nrPDB
Length = 215
Score = 227 bits (578), Expect = 4e-60, Method: Composition-based stats.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 24/226 (10%)
Query: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPF 77
+++ VK + G+CPFSQR+ + L K + + +++ KP +++P P
Sbjct: 5 LDICVKVAVGAPDVLGDCPFSQRVLLTLEEKKLPYKTHLINVSDKPQWFLDISPEGKVPV 64
Query: 78 ITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEAN 137
+ + + D + I LEE P PE + G IF F ++K+ +AN
Sbjct: 65 VKLDGKWVADSDVIVGLLEEKYPEPSLKTP----PEFASVGSKIFGAFVTFLKSK--DAN 118
Query: 138 EALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHI 197
+ E+ L+ L+ L+ +L + + F+ G+++T D +L PKL+
Sbjct: 119 DGSEKALVDELEALENHLKTH----------------SGPFVAGEKITAVDLSLAPKLYH 162
Query: 198 VKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIA 243
++V Y+N+ +P+ +T + Y +SR+ F NT + KE+ +A
Sbjct: 163 LEVALGHYKNWSVPESLTSVRNYAKALFSRESFENTK-AKKEIVVA 207
>4QQ7-A nrPDB
Length = 207
Score = 186 bits (472), Expect = 8e-48, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 18/207 (8%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEE 93
CPFSQR ++L+ KG+ F + VDL KP D+ + P P + + + N I E
Sbjct: 13 TCPFSQRCRLVLFEKGMDFEIRDVDLFNKPEDISVMNPYGQVPILVERDLILYESNIINE 72
Query: 94 FLEEVLCPPKYLKLSP-KHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLD 152
+++E P+ + P + + ++ + ++ E +A E+ K +
Sbjct: 73 YIDERFPHPQLMPADPVQRARARLFLLNFEKELFVHVSTLENEKGKAAEKNHEKARLAIR 132
Query: 153 EYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPK 212
+ L P F +++ G+E ++ D + P L + + ++ K
Sbjct: 133 DRLTQLAP-----------IFVKNKYMLGEEFSMLDVAIAPLLWRL-----DHYGIELSK 176
Query: 213 GMTGIWRYLTNAYSRDEFTNT-CPSDK 238
+ +Y +SR + PS+K
Sbjct: 177 NAAPLMKYAERIFSRPAYIEALTPSEK 203
>3LFL-A nrPDB
Length = 240
Score = 81.0 bits (198), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 14/166 (8%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFN-SEVKTDVNKIEE 93
CPF++R ++L KG+ V ++LK KP P P + + ++ + E
Sbjct: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNPFGLVPVLENSQGQLIYESAITCE 91
Query: 94 FLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDE 153
+L+E K L P +++F+K + + + N+ GL + +K
Sbjct: 92 YLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRK--- 148
Query: 154 YLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVK 199
+ +E + F G+ +++ D + P ++
Sbjct: 149 ----------EFTKLEVLTNKKTTFFGGNSISMIDYLIWPWFERLE 184
>4PQI-A nrPDB
Length = 241
Score = 79.5 bits (194), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 21/216 (9%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDL--KRKPADL-QNLAPGTHPPFITFNSEVKTDVNK 90
CPF+QR+++ KG+ + V L + +PA + + P P + N ++ +
Sbjct: 40 TCPFAQRVWITRNFKGLQDEIKLVPLILQNRPAWYPEKVYPPNKVPSLEHNGKITGESLD 99
Query: 91 IEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQK 150
+ ++LE P L P E KF+ +
Sbjct: 100 LIKYLESNFEGPSLLPKDPAKKEFAEELFSYTDKFNGTV------------------YTA 141
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDI 210
L D KF F G E +L D +P + + + + +DI
Sbjct: 142 FKGDLAKEAGPAFDHLENALHKFDDGPFFLGKEFSLVDIAYIPFVERLNIFLLEVFKYDI 201
Query: 211 PKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSD 246
G + ++ + + T KE+ Y
Sbjct: 202 TAGRQKLAAWIEEVNKIEAYKQTKTDPKELVEFYKK 237
>2CZ2-A nrPDB
Length = 223
Score = 75.6 bits (184), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 14/163 (8%)
Query: 38 SQRLFMILWLKGVVFSVTTVDL-----KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIE 92
S R+ + L LKG+ + + ++L ++ + Q L P P + + I
Sbjct: 24 SWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLNPMKQVPALKIDGITIVQSLAIM 83
Query: 93 EFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLD 152
E+LEE P+ L P+ D+ A ++N E + + +
Sbjct: 84 EYLEETRPIPRLLPQDPQKRAIVRMISDLIASGIQPLQNLSVLKQVGQENQMQWAQKVIT 143
Query: 153 EYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKL 195
N+ + ++ + ++ GDE+++AD L+P++
Sbjct: 144 SGFNA---------LEKILQSTAGKYCVGDEVSMADVCLVPQV 177
>3QAG-A nrPDB
Length = 239
Score = 72.9 bits (177), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 12/169 (7%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFI-TFNSEVKTDVNKIEE 93
CP+S R ++L K + V ++L+ KP P H P + T S++ + E
Sbjct: 32 CPYSHRTRLVLKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQSQLIYESVIACE 91
Query: 94 FLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDE 153
+L++ K P +++F+K K E LK +
Sbjct: 92 YLDDAYPGRKLFPYDPYERARQKMLLELFSKVPHLTKECLVALRSGRESTNLKAALR--- 148
Query: 154 YLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVA 202
+ N E +++ F G +++ D L P + V
Sbjct: 149 --------QEFSNLEEILEYQNTTFFGGTSISMIDYLLWPWFERLDVYG 189
>1FW1-A nrPDB
Length = 216
Score = 71.4 bits (173), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/163 (22%), Positives = 63/163 (38%), Gaps = 14/163 (8%)
Query: 38 SQRLFMILWLKGVVFSVTTVDL-----KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIE 92
S R+ + L LKG+ + ++L ++ D Q L P P + + I
Sbjct: 17 SWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAII 76
Query: 93 EFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLD 152
E+LEE P+ L PK S D+ A ++N E L +
Sbjct: 77 EYLEETRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLKQVGEEMQLTWAQNAIT 136
Query: 153 EYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKL 195
N+ + ++ + + GDE+T+AD L+P++
Sbjct: 137 CGFNA---------LEQILQSTAGIYCVGDEVTMADLCLVPQV 170
>4J2F-A nrPDB
Length = 223
Score = 71.0 bits (172), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 22/217 (10%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVNKIEE 93
PFS R+ L LKG+ + DL K L P P + + + I E
Sbjct: 13 SPFSCRVIWALKLKGIPYEYVEEDLFNKSPLLLQYNPVHKKIPVLVHGGKPICESTIILE 72
Query: 94 FLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGL---LKTLQK 150
+L+E L P + I N E LE+ + L+ L+
Sbjct: 73 YLDETWPENPLLPSDPHERAVARFWVKFIEDKGTAIWNIFRTKGEELEKAVKNCLEVLKT 132
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDI 210
++E+ + S ++ GD++ + D H + V+ ++ +
Sbjct: 133 IEEH---------------AMGVSDDKYFGGDKIGIVDIAFCGIAHWLGVI-EEVAGVKV 176
Query: 211 --PKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYS 245
+ + + N P ++ +
Sbjct: 177 LESQKFPRLHAWTENFKEAPIIKENLPDRDQMTAFFK 213
>2VO4-A nrPDB
Length = 219
Score = 68.7 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 25/223 (11%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVNKIEE 93
PF R+ + L KG+ + DL+ K L + P P + N + + +
Sbjct: 13 SPFGMRVRIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQ 72
Query: 94 FLEEVLCP-----PKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTL 148
++EEV P + I S+ E EA ++ ++ L
Sbjct: 73 YIEEVWNDRNPLLPSDPYQRAQTRFWADYVDKKIYDLGRKIWTSKGEEKEAAKKEFIEAL 132
Query: 149 QKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNF 208
+ L+E L + + GD + D L+P + + +
Sbjct: 133 KLLEEQLG------------------DKTYFGGDNLGFVDIALVP-FYTWFKAYETFGTL 173
Query: 209 DIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251
+I + ++ + P ++V D+ K+L
Sbjct: 174 NIESECPKFIAWAKRCLQKESVAKSLPDQQKVYEFIMDLRKKL 216
>4CHS-A nrPDB
Length = 219
Score = 67.9 bits (164), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 25/223 (11%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVNKIEE 93
PF R+ + L KG+ + DL+ K L + P P + N + ++ +
Sbjct: 13 SPFGMRVRIALAEKGIEYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKPISESLIAVQ 72
Query: 94 FLEEV-LCPPKYLKLSPKHPESNTAGMDI----FAKFSAYIKNSRPEANEALERGLLKTL 148
++EEV L P D I S+ E EA ++ ++ L
Sbjct: 73 YIEEVWNDRNPLLPSDPYQRAQARFWADYVDIKIHDLGKKIWTSKGEEKEAAKKEFIEAL 132
Query: 149 QKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNF 208
+ L+E L + + GD + D L+P + V + + +
Sbjct: 133 KLLEEQLG------------------DKTYFGGDNIGFVDIALVP-FYTWFKVYETFGSL 173
Query: 209 DIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAKRL 251
+I + ++ + P +V ++ K+L
Sbjct: 174 NIENECPRFVAWAKRCLQKESVAKSLPDQHKVYEFVVEIRKKL 216
>5J5N-A nrPDB
Length = 231
Score = 67.5 bits (163), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 25/212 (11%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVNKIEE 93
PF R+ + L KGV + + DL K A L + P P + N + + I +
Sbjct: 25 SPFGMRVRLALAEKGVKYEYSEEDLWNKSALLLQMNPVNKQIPVLVHNGKPVCESLIIVQ 84
Query: 94 FLEE--VLCPPKYLKLSPKHPES---NTAGMDIFAKFSAYIKNSRPEANEALERGLLKTL 148
+++E P + +S I + E EA ++ + +L
Sbjct: 85 YIDEVWKDSAPLLPSDPYQRAQSRFWADFVDKKIYDLGRKIWTKKGEEQEAAKKDFIDSL 144
Query: 149 QKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNF 208
+ ++ L + + G+ + D L+P + + NF
Sbjct: 145 KLMEGELG------------------DKPYFGGETIGYVDIALVP-FYSWFYAYETIGNF 185
Query: 209 DIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
+I + Y ++ + ++V
Sbjct: 186 NIEAECPKMIAYCKRCLQKETVSKALEDPQKV 217
>3WD6-A nrPDB
Length = 256
Score = 67.1 bits (162), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/206 (19%), Positives = 64/206 (31%), Gaps = 28/206 (13%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPP-FITFNSEVKTDVNKIEE 93
CP++QR + L K + + V +DL KP L + P + E
Sbjct: 38 CPYAQRTILALNAKQIDYEVVNIDLIDKPEWLTTKSAFAKVPAIEIAEDVTIYESLVTVE 97
Query: 94 FLEEVLCPPKYLKLSPKHP-------ESNTAGMDIFAKFSAYIKNSRPEANEALERGLLK 146
+L+EV L P E++ +F K + E A + L
Sbjct: 98 YLDEVYPKRPLLPQDPLKKALDKIIVEASAPIQSLFIKILKFSDTVNEEHVAAYHKAL-- 155
Query: 147 TLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYR 206
+ E +K FLDG E AD + P ++ A R
Sbjct: 156 ------------------DFIQEQLKNRGTVFLDGSEPGYADYMIWPWFERLRAFAHDER 197
Query: 207 NFDIPKGMTGIWRYLTNAYSRDEFTN 232
P + + Y+ N +
Sbjct: 198 VRLEPSKYSLLLEYIDNMLKDSAVSQ 223
>1AW9-A nrPDB
Length = 216
Score = 64.0 bits (154), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 15/203 (7%)
Query: 40 RLFMILWLKGVVFSVTTVDLK---RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLE 96
R+ +L KG+ F + VDL K D L P P + EV + I ++
Sbjct: 16 RVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIA 75
Query: 97 EVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLL---KTLQKLDE 153
+ L P + + + + + N+ P + L R LL +D+
Sbjct: 76 SKYAS-EGTDLLPATASAAKLEVWLEVESHHFYPNASPLVFQLLVRPLLGGAPDAAVVDK 134
Query: 154 YLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKG 213
+ + + + ++L GDE TLAD N L + K +
Sbjct: 135 HAEQLA----KVLDVYEAHLARNKYLAGDEFTLADANHASYLLYLSKTPK----AGLVAA 186
Query: 214 MTGIWRYLTNAYSRDEFTNTCPS 236
+ + +R F T +
Sbjct: 187 RPHVKAWWEAIVARPAFQKTVAA 209
>1E6B-A nrPDB
Length = 221
Score = 61.3 bits (147), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 69/204 (33%), Gaps = 17/204 (8%)
Query: 40 RLFMILWLKGVVFSVTTVDLKRKPA---DLQNLAPGTHPPFITFNSEVKTDVNKIEEFLE 96
R+ + L LKG+ + V+L + D + + P P + V D I +L+
Sbjct: 22 RVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPMGTVPALVDGDVVINDSFAIIMYLD 81
Query: 97 EVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLN 156
E P L N + S + +P N A+ R + + + ++
Sbjct: 82 EKYPEPPLLPRDLHKRAVN------YQAMSIVLSGIQPHQNLAVIRYIEEKINVEEKTAW 135
Query: 157 SPLPDEIDENSMEDIKFS-TRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMT 215
++E + + + GDE+ LAD L P++H F I
Sbjct: 136 VNNAITKGFTALEKLLVNCAGKHATGDEIYLADLFLAPQIH------GAINRFQINMEPY 189
Query: 216 GIWRYLTNAY-SRDEFTNTCPSDK 238
+Y F N P +
Sbjct: 190 PTLAKCYESYNELPAFQNALPEKQ 213
>5NR1-A nrPDB
Length = 228
Score = 61.0 bits (146), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 67/202 (33%), Gaps = 14/202 (6%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITF----NSEVKTDVNK 90
P S+++ + L K + F V P + +L P PP + + V +
Sbjct: 13 DPASRQVRLALGEKRLPFVEMQVRYWEMPPEFTSLNPSGMPPVLVETKHQRNLVICETRA 72
Query: 91 IEEFLEEVLCPPKYLKLSP-KHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQ 149
I E +EE P L P + E+ KF + +E +E+ LL+
Sbjct: 73 ILEHIEETETEPPLLGRDPAERAEARRLLQWFDRKFDNEVNGFL--LHEKMEKRLLRMGA 130
Query: 150 KLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFD 209
L + TR +L G M+LAD L ++ D
Sbjct: 131 PDLAALRQGREALRMHLGYIESLLQTRDWLAGRRMSLADFAAAAHLSVIDYFG------D 184
Query: 210 IP-KGMTGIWRYLTNAYSRDEF 230
+P K + SR F
Sbjct: 185 VPWKDFQAAKTWYMKLKSRPCF 206
>4AGS-A nrPDB
Length = 471
Score = 59.8 bits (143), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 76/233 (32%), Gaps = 24/233 (10%)
Query: 19 IELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRK-PADLQNLAPGTHPPF 77
++L+V A CPF R+ ++ K V + V L+ + P + + P P
Sbjct: 27 LKLYVSA--------TCPFCHRVEIVAREKQVSYDRVAVGLREEMPQWYKQINPRETVPT 78
Query: 78 ITF---NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRP 134
+ + + I ++L+ P L A+ +I
Sbjct: 79 LEVGNADKRFMFESMLIAQYLDNSGAPAG--ALMGSSAAQRHQIEFFLAQVGDFI----- 131
Query: 135 EANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPK 194
GLL+ ++ + + + + +T + E T+AD L+P
Sbjct: 132 ----GAAHGLLRDPLSGEKR-KAMDDNAAYVDGLLAANQTTGPYYCDGEFTMADVALVPF 186
Query: 195 LHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDV 247
L +K Y +D+ + A R T P+ + Y +
Sbjct: 187 LVRLKPALMYYAGYDVFCKAPRMKALWAAAAQRASVRETSPTAAQCIENYRHL 239
Score = 55.6 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 21/201 (10%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFI-TFNSEVKTDVNKIEE 93
CPF R + L+ + V L +P + + P P + T + E + I +
Sbjct: 261 CPFVDRARLASELRKFQMHIVEVPLHPQPEWYKYINPRDTVPALFTPSGEAVHESQLIVQ 320
Query: 94 FLEEVLCPPKYLKLSPKHPESNTAGMDIFAK----FSAYIKNSRPEANEALERGLLKTLQ 149
+++ K L P+ + F + F + + E + L
Sbjct: 321 YID--CVATKGSALVPRGDAEKEYEVGFFVENAGYFVGGLMSWIIRGGEDAKAELQWAAG 378
Query: 150 KLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYR-NF 208
+L++ L F F G M D +LP L K ++ +
Sbjct: 379 ELEQQLAKH-------------PFGEGPFFGGKRMNAGDVAILPFLVRAKAFMPEFSGGY 425
Query: 209 DIPKGMTGIWRYLTNAYSRDE 229
D+ + + E
Sbjct: 426 DLFAHFPLLNGLAEAGMATPE 446
>3UBL-A nrPDB
Length = 242
Score = 59.4 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/222 (16%), Positives = 74/222 (33%), Gaps = 12/222 (5%)
Query: 28 DGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTD 87
G SI N + ++ + + KG+ + + ++ D ++P P + + + +
Sbjct: 7 HGASISN--YVNKVKLGILEKGLEYEQIRIAPSQE-EDFLKISPMGKIPVLEMDGKFIFE 63
Query: 88 VNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKT 147
I EFL+ + P+ KL P+ P +I Y+ R L
Sbjct: 64 SGAILEFLDTIF--PQTPKLIPEDPWEAARVREISTIIETYLDIP-------ARRIYLPA 114
Query: 148 LQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRN 207
+ E + + ++ G+ TLADC+ L ++ + +
Sbjct: 115 AKVSPEIVEEVHSTLVKGIKALQRVVRFSPYIAGNVFTLADCSGFAHLSVLDEELRPFYP 174
Query: 208 FDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSDVAK 249
+ P + W+ DK++ AK
Sbjct: 175 NNHPLDLLNGWKEYFVFMKTKAGPALVEKDKQILKKILARAK 216
>2JL4-A nrPDB
Length = 213
Score = 58.7 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 76/214 (35%), Gaps = 30/214 (14%)
Query: 38 SQRLFMILWLKGVVFSVTTVDLKRK---PADLQNLAPGTHPPFITFNSEVKTDVNKIEEF 94
S RL + L LKGV + V L ++ + L P P + ++V I E+
Sbjct: 13 SHRLRIALNLKGVPYEYLAVHLGKEEHLKDAFKALNPQQLVPALDTGAQVLIQSPAIIEW 72
Query: 95 LEEVLCPPKYLKLSPKHPE-----SNTAGMDIFA----KFSAYIKNSRPEANEALERGLL 145
LEE P L + + G DI + Y++ A+EA
Sbjct: 73 LEEQYPTPALLPADADGRQRVRALAAIVGCDIHPINNRRILEYLR-KTFGADEA------ 125
Query: 146 KTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKY 205
+ S D + D K R+ GD TLADC L+P++ +
Sbjct: 126 -AINAWCGTWISAGFDAYEALLAVDPK--RGRYSFGDTPTLADCYLVPQV-------ESA 175
Query: 206 RNFDIPKGMTGIWRYLTNAY-SRDEFTNTCPSDK 238
R F + + R + A D F P+ +
Sbjct: 176 RRFQVDLTPYPLIRAVDAACGELDAFRRAAPAAQ 209
>3IBH-A nrPDB
Length = 233
Score = 56.0 bits (133), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 26/210 (12%)
Query: 36 PFSQRLFMILWLKGVVFSVTTVDLK------RKPADLQNLAPGTHPPFITFNSEVKTDVN 89
P+ R+ + L K ++ SV V + +KP L GT P + + +
Sbjct: 28 PYPARVRIALAEKNMLSSVQFVRINLWKGEHKKPEFLAKNYSGTVPVLELDDGTLIAECT 87
Query: 90 KIEEFLEEVLCPPKYLKLSPKHPES-----NTAGMDIFAKFSAYIKNSRPEANEALE--R 142
I E+++ + P +P A +++ S Y ++ P +E +
Sbjct: 88 AITEYIDALDGTPTLTGKTPLEKGVIHMMNKRAELELLDPVSVYFHHATPGLGPEVELYQ 147
Query: 143 GLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVA 202
L++ D+ L D E R ++ GD ++AD ++ L +
Sbjct: 148 NKEWGLRQRDKAL--HGMHYFDTVLRE------RPYVAGDSFSMADITVIAGL-----IF 194
Query: 203 KKYRNFDIPKGMTGIWRYLTNAYSRDEFTN 232
+P+ + + R
Sbjct: 195 AAIVKLQVPEECEALRAWYKRMQQRPSVKK 224
>3R2Q-A nrPDB
Length = 202
Score = 53.6 bits (127), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 68/207 (32%), Gaps = 20/207 (9%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFI-TFNSEVKTDVNKIE 92
PF ++L ++L KG+ F + P P + T E D I
Sbjct: 8 TSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFNPLGKVPVLVTEEGECWFDSPIIA 67
Query: 93 EFLEEVLCPPKYLKLSP----KHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTL 148
E++E + P L P + + I ++ A + E LL+
Sbjct: 68 EYIELMNVAPAMLPRDPLESLRVRKIEALADGIMDAGLVSVREQARPAAQQSEDELLRQR 127
Query: 149 QKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNF 208
+K++ L+ +D D + C + L+ +V +
Sbjct: 128 EKINRSLDVLEGYLVDGTLKTDTVNLATIAIA--------CAVG-YLNFRRVAP----GW 174
Query: 209 DIPKGMTGIWRYLTNAYSRDEFTNTCP 235
+ + + + N +SR+ F T P
Sbjct: 175 CV--DRPHLVKLVENLFSRESFARTEP 199
>5EY6-A nrPDB
Length = 217
Score = 52.9 bits (125), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 23/167 (13%)
Query: 40 RLFMILWLKGVVFSVTTVDLKR---KPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLE 96
R+ + L K V F + VD+ + K D + P P S + I ++
Sbjct: 17 RVLVTLLEKDVPFQIIPVDMSKGEHKKPDYLKIQPFGQVPAFQDESISLFESRSICRYVC 76
Query: 97 EVLCPPKYLKLSPKHP-ESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYL 155
E L +P E + + A+ ++ G L +
Sbjct: 77 EKYADRGDKGLYGTNPLERASIDQWVEAEGQSF----------GPSSGALVFQLAFAPRM 126
Query: 156 NSPLPDEIDENSME---------DIKFSTRRFLDGDEMTLADCNLLP 193
N P + + + E + + RFL GDE T AD + LP
Sbjct: 127 NIPQDQGVIKQNEEKLGKVLDIYEQRLGESRFLAGDEFTFADLSHLP 173
>5F07-A nrPDB
Length = 213
Score = 52.1 bits (123), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 24/177 (13%)
Query: 29 GESIGNCPFSQRLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVK 85
G ++ CP QR+ L KGV F + VDL ++K + P P +
Sbjct: 6 GPAVAVCP--QRVMACLLEKGVEFDLVHVDLDSGEQKLPEFLLKQPFGQVPVVEDGDFKL 63
Query: 86 TDVNKIEEFLEEVLCP--PKYLKLSPKHPESNTAGMDIF-AKFSAYIKNSR------PEA 136
+ I + P L + + ++I F+ + N P
Sbjct: 64 FESRAIIRYYAAKYEDRGPNLLGNTLEEKALVDQWLEIEAHNFNDLVFNIVFQVVILPRI 123
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLP 193
+ + L++T + + + + S ++L GD TLAD + LP
Sbjct: 124 GQQGDSELVRTYE----------EKLEKVLDVYEKRLSKSKYLAGDSFTLADLSHLP 170
>5F06-A nrPDB
Length = 216
Score = 51.7 bits (122), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 25/205 (12%)
Query: 40 RLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLE 96
R+ L K + F + VDL + K P P + + + I ++
Sbjct: 15 RVLTCLHEKNLDFELVPVDLFAGEHKQPPFLAKNPFGQIPALEEDDLTLFESRAITSYIA 74
Query: 97 EVLCPPKYLKLSPKH-PESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYL 155
E Y + ++ E+ + ++ + ++ N P + + ++ L+
Sbjct: 75 EKFKGTGYDLIRHENLKEAASV--KVWTEVESHRYN--PAIAPIVFQFMVAPLRG----- 125
Query: 156 NSPLPDEIDENSME--------DIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRN 207
NSP ID+N + + K S+ ++L GD +LAD + LP + + K
Sbjct: 126 NSPDQTIIDDNVEKLGKVLDIYEAKLSSTKYLAGDFYSLADLHHLPYTYYL----MKTPA 181
Query: 208 FDIPKGMTGIWRYLTNAYSRDEFTN 232
+ + + + SR F
Sbjct: 182 ASVVNERPHVKAWWEDISSRPAFKK 206
>4IGJ-A nrPDB
Length = 242
Score = 51.3 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 68/207 (32%), Gaps = 21/207 (10%)
Query: 40 RLFMILWLKGVVFSVTTVDLKRKPAD---LQNLAPGTHPPFIT----FNSEVKTDVNKIE 92
R+ + L LKG+ + VDL + Q P + P + + + I
Sbjct: 38 RVRLGLALKGLAYEYRAVDLLAQEQFQAAHQARNPMSQVPVLEVEEDGRTHLLVQSMAIL 97
Query: 93 EFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKN-SRPEANEALERGLLKTLQKL 151
E+LEE P L G + ++ + ++P N + R L + +
Sbjct: 98 EWLEERHPEPALLPPD-------LWGRARVRALAEHVNSGTQPMQNALVLRMLREKVPGW 150
Query: 152 DEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIP 211
D ++ RF GD TLADC L+P+L+ +
Sbjct: 151 DREWARFFIARGLAALETAVRDGAGRFSHGDAPTLADCYLVPQLYNARRFGLDL------ 204
Query: 212 KGMTGIWRYLTNAYSRDEFTNTCPSDK 238
+ + R + F P +
Sbjct: 205 EPYPTLRRVDEACAALAPFQAAHPDRQ 231
>1GWC-A nrPDB
Length = 230
Score = 50.6 bits (119), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 10/141 (7%)
Query: 26 GSDGESIGN--CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNS 82
G D + +G PF R+ + L LKG+ + DL +K L P P + N
Sbjct: 4 GDDLKLLGAWPSPFVTRVKLALALKGLSYEDVEEDLYKKSELLLKSNPVHKKIPVLIHNG 63
Query: 83 EVKTDVNKIEEFLEEVLCP--PKYLKLSPKHPESNT-----AGMDIFAKFSAYIKNSRPE 135
+ I ++++EV P L P + A + +++ E
Sbjct: 64 APVCESMIILQYIDEVFASTGPSLLPADPYERAIARFWVAYVDDKLVAPWRQWLRGKTEE 123
Query: 136 ANEALERGLLKTLQKLDEYLN 156
++ + L+ L
Sbjct: 124 EKSEGKKQAFAAVGVLEGALR 144
>4RI7-A nrPDB
Length = 215
Score = 50.6 bits (119), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 9/201 (4%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKR---KPADLQNLAPGTHPPFITFNSEVKTDVNKI 91
C R+ L K V F + +DL + K + + P P S + I
Sbjct: 13 CTAVSRVLATLIEKDVPFHLIPIDLSKGEQKKPEYLKIQPFGQVPAFKDESITLFESRAI 72
Query: 92 EEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKL 151
++ + L S +I + P + + + L ++
Sbjct: 73 CRYICDKYADKGNKSLYGTDILSK---ANIDQWVETDGQTFGPPSGDLVHDLLFSSVPVD 129
Query: 152 DEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIP 211
+ + + + + K RFL GDE + AD + LP + K F
Sbjct: 130 EALIKKNVDKLAKVLDIYEQKLGQTRFLAGDEFSFADLSHLPNGDYLVNSTDKGYLFTSR 189
Query: 212 KGMTGIWRYLTNAYSRDEFTN 232
K + W ++N R+ +
Sbjct: 190 KNVNRWWTEISN---RESWKK 207
>1OYJ-A nrPDB
Length = 231
Score = 50.2 bits (118), Expect = 9e-07, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAP-GTHPPFITFNSEVKTDVNKIEE 93
PF QR + + KG+ F DL K L P P + ++ I +
Sbjct: 15 SPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQ 74
Query: 94 FLEEVLCPPKYLKLSP 109
+L++ P L P
Sbjct: 75 YLDDAF--PGTPHLLP 88
>1PN9-A nrPDB
Length = 209
Score = 49.8 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 39/193 (20%)
Query: 33 GNCPFSQRLFMILWLKGVVFSVTTVDLKR----KPADLQNLAPGTHPPFITFNSEVKTDV 88
G+ P + + M GV ++ DL + KP L P P + N +
Sbjct: 8 GSAP-CRAVQMTAAAVGVELNLKLTDLMKGEHMKPE-FLKLNPQHCIPTLVDNGFALWES 65
Query: 89 NKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD--------IFAKFSAY----IKNSRPEA 136
I+ +L E KL PK P+ ++ +F+ Y I +P A
Sbjct: 66 RAIQIYLAEKYGKDD--KLYPKDPQKRAVVNQRLYFDMGTLYQRFADYHYPQIFAKQP-A 122
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
N E+ + + L+ +L + + G+++T+AD +L +
Sbjct: 123 NPENEKKMKDAVGFLNTFLEG------------------QEYAAGNDLTIADLSLAATIA 164
Query: 197 IVKVVAKKYRNFD 209
+V + +
Sbjct: 165 TYEVAGFDFAPYP 177
>3LG6-A nrPDB
Length = 235
Score = 49.4 bits (116), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 66/196 (33%), Gaps = 31/196 (15%)
Query: 38 SQRLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFN-----------SE 83
S RL + LK + ++ V+L ++ ++L P P + + S
Sbjct: 21 SGRLRIAFHLKSIPYTRHPVNLLKGEQHSDTYKSLNPTNTVPLLVVSNINNTVSPSSASF 80
Query: 84 VKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTA----GMDIFAKFSAYIKNSRPEANEA 139
E+LEE L L P A +I A +
Sbjct: 81 SIGQSLAALEYLEEALPTNARPLLPPISNPVARAHVRTICNIIAC----------DVQPV 130
Query: 140 LERGLLKTLQKLDEYLNSPLPDEIDE---NSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
+ K ++ LD D + + ++ S RF GDE+TLAD L+P +
Sbjct: 131 TNLKIQKKVKALDGDPTVWSRDLATQGFGAVEKLLELSAGRFCVGDEITLADVCLVPAVW 190
Query: 197 IVKVVAKKYRNFDIPK 212
+ V F I K
Sbjct: 191 AAERVGMDLARFPITK 206
>4MK3-A nrPDB
Length = 226
Score = 49.4 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 71/208 (34%), Gaps = 20/208 (9%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFIT-FNSEVKTDVNKIE 92
P+++++ ++L K + + + ++ + P P + + D I
Sbjct: 30 TSPYARKVRVVLAEKKIDYEMIEENVWSPDTTIGRFNPLGKVPCLVMEDGGAVFDSRVIA 89
Query: 93 EFLEEVLCPPKY-LKLSPKHPESN----TAGMDIFAKFSAYIKNSRPEANEALERGLLKT 147
E+ + + + + S + E A + A A ++ ++ + +E E + +
Sbjct: 90 EYADTLSPVSRLIPQGSRERLEVRCWEALADGLLDAALLARLEVTQRKESERSESWVQRQ 149
Query: 148 LQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRN 207
K+D L + D+ + G TLAD + L + ++ +
Sbjct: 150 RSKIDAALTAMSTGLADKT-----------WCTGTHYTLADVAVGCALAYLDF---RFPD 195
Query: 208 FDIPKGMTGIWRYLTNAYSRDEFTNTCP 235
+ + R F +T P
Sbjct: 196 IAWRDRHPNLVAFQEKIEKRQSFIDTEP 223
>3BBY-A nrPDB
Length = 215
Score = 49.0 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 27/204 (13%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKR----KPADLQNLAPGTHPPFITFNSEVKTDVNK 90
P+ ++ L KG+ F + T+DL +P Q P + + ++ +
Sbjct: 17 SPYVLSAWVALQEKGLSFHIKTIDLDSGEHLQPTW-QGYGQTRRVPLLQIDDFELSESSA 75
Query: 91 IEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQK 150
I E+LE+ PP + ++ P E+ I A++++ E ++ K
Sbjct: 76 IAEYLEDRFAPPTWERIYPLDLENRARARQI----QAWLRSDLMPIREERPTDVVFAGAK 131
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGD-----EMTLADCNLLPKLHIVKVVAKKY 205
+PL E ++ + + + G E +AD +L ++ +
Sbjct: 132 -----KAPLTAEGKASAEKLFAMAEHLLVLGQPNLFGEWCIADTDLALMINRLV-----L 181
Query: 206 RNFDIPKGMTGIWRYLTNAYSRDE 229
++P+ + Y T + R
Sbjct: 182 HGDEVPERLV---DYATFQWQRAS 202
>3RBT-A nrPDB
Length = 246
Score = 48.6 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 29/176 (16%)
Query: 36 PFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITF----NSEVKTDVNKI 91
P+ R+ ++L K + + V +D R P + P P + + I
Sbjct: 36 PYGHRVLLVLEAKRIKYEVYRLDPLRLPEWFRAKNPRLKIPVLEIPTDQGDRFLFESVVI 95
Query: 92 EEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKL 151
++L+E P Y+K E + +L+
Sbjct: 96 CDYLDEKYTRHTLHSHDP------------------YVKAQDRLLIERFNELIKGSLECF 137
Query: 152 DEYLNSPLPDEIDENSMEDIKFSTRR---FLDGDEMTLADCNLLP---KLHIVKVV 201
D + ++I + K T R + G+ + D + P +L++++ V
Sbjct: 138 DTNF-AFGSEQIIQTLEIFEKELTNRGTNYFGGNRPGMLDYMVWPWVERLYLLRCV 192
>6F05-A nrPDB
Length = 215
Score = 48.6 bits (114), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 27/208 (12%)
Query: 39 QRLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFL 95
+R + L KGV F VDL + K L P P + + + ++
Sbjct: 14 KRALVTLIEKGVAFETIPVDLMKGEHKQPAYLALQPFGTVPAVVDGDYKIFESRAVMRYV 73
Query: 96 EEVLCP--PKYLKLSPKHPESNTAGMDIFA--------KFSAYIKNSRPEANEALERGLL 145
E P L + + +D+ A + +I + + E+ +
Sbjct: 74 AEKYRSQGPDLLGKTVEDRGQVEQWLDVEATTYHPPLLNLTLHIMFASVMGFPSDEKLIK 133
Query: 146 KTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKY 205
++ +KL L+ S ++L GD ++LAD LP + K
Sbjct: 134 ESEEKLAGVLDVYEAH-----------LSKSKYLAGDFVSLADLAHLPFTDYLVGPIGKA 182
Query: 206 RNFDIPKGMTGIWRYLTNAYSRDEFTNT 233
K ++ W + SR + T
Sbjct: 183 YMIKDRKHVSAWW---DDISSRPAWKET 207
>2PMT-A nrPDB
Length = 203
Score = 48.6 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 72/207 (34%), Gaps = 36/207 (17%)
Query: 33 GNCPFSQRLFMILWLKGVVFSVTTVDLKRKP----ADLQNLAPGTHPPFI-TFNSEVKTD 87
G+C S + +L G+ FS+ +DL+ K D + P P + N ++ T+
Sbjct: 8 GSCSLSPHI--VLRETGLDFSIERIDLRTKKTESGKDFLAINPKGQVPVLQLDNGDILTE 65
Query: 88 VNKIEEFLEEVLC------PPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALE 141
I ++L ++ PPK L+ + N ++ +S + PE+
Sbjct: 66 GVAIVQYLADLKPDRNLIAPPKALERYHQIEWLNFLASEVHKGYSPLFSSDTPES----- 120
Query: 142 RGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVV 201
L + L S D S ++ + GD T+AD L V
Sbjct: 121 -----YLPVVKNKLKSKFVYIND-------VLSKQKCVCGDHFTVADAYLFTLSQWAPHV 168
Query: 202 AKKYRNFDIPKGMTGIWRYLTNAYSRD 228
A ++ + YL R
Sbjct: 169 ALDL------TDLSHLQDYLARIAQRP 189
>1JLV-A nrPDB
Length = 209
Score = 47.9 bits (112), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 39/193 (20%)
Query: 33 GNCPFSQRLFMILWLKGVVFSVTTVDL----KRKPADLQNLAPGTHPPFITFNSEVKTDV 88
G+ P + + M GV ++ +L KP + P P + N +
Sbjct: 8 GSAP-CRAVQMTAAAVGVELNLKLTNLMAGEHMKPE-FLKINPQHCIPTLVDNGFALWES 65
Query: 89 NKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD--------IFAKFSAY----IKNSRPEA 136
I +L E KL PK P+ ++ +F+ Y I +P
Sbjct: 66 RAICTYLAEKYGKDD--KLYPKDPQKRAVVNQRLYFDMGTLYQRFADYYYPQIFAKQPAN 123
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
E E+ + + L+ +L+ +++ GD +T+AD +L +
Sbjct: 124 AEN-EKKMKDAVDFLNTFLDGH------------------KYVAGDSLTIADLTVLATVS 164
Query: 197 IVKVVAKKYRNFD 209
V + +
Sbjct: 165 TYDVAGFELAKYP 177
>5F05-A nrPDB
Length = 212
Score = 47.9 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 11/166 (6%)
Query: 39 QRLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFL 95
QR+ L+ K V F + V+L + K +L P P + I +++
Sbjct: 15 QRVLATLYEKEVEFELVNVNLGAGEHKQEPHISLNPFGQVPAAVDGDLKLFESRAISQYV 74
Query: 96 EEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKL--DE 153
K +L T + + + P A++ + + K + L D
Sbjct: 75 AHQYAS-KGTQLGAAGNGYATILVWQEVESHQF----DPSASKLVWEQVFKPVFGLPTDA 129
Query: 154 YLNSPLPDEIDE-NSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIV 198
L + + + + + + S ++L D TLAD + LP + +
Sbjct: 130 ALVAETEVTLGKVLDVYEARLSQSKYLASDSFTLADLHHLPNIQAL 175
>3MAK-A nrPDB
Length = 209
Score = 47.5 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 69/204 (33%), Gaps = 37/204 (18%)
Query: 33 GNCPFSQRLFMILWLKGVVFSVTTVDLKR----KPADLQNLAPGTHPPFITFNSEVKTDV 88
G+ P + + M GV + ++L+ KP + P P + N +
Sbjct: 9 GSSP-CRSVIMTAKAVGVELNKKLLNLQAGEHLKPE-FLKINPQHTIPTLVDNGFALWES 66
Query: 89 NKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD--------IFAKFSAYIKNSRPEANEAL 140
I+ +L E L PK P+ ++ F+ Y A
Sbjct: 67 RAIQVYLVEKYGKTD--SLYPKCPKKRAVINQRLYFDMGTLYQSFANYYYPQVFAKAPAD 124
Query: 141 ERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKV 200
K ++ E+LN+ L + + GD +T+AD L+ + +V
Sbjct: 125 PEAFKK-IEAAFEFLNTFLEGQD--------------YAAGDSLTVADIALVATVSTFEV 169
Query: 201 VAKKYRNFDIPKGMTGIWRYLTNA 224
F+I K + R+ NA
Sbjct: 170 A-----KFEISK-YANVNRWYENA 187
>5ZWP-A nrPDB
Length = 208
Score = 46.3 bits (108), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 62/195 (31%), Gaps = 42/195 (21%)
Query: 33 GNCPFSQRLFMILWLKGVVFSVTTVDLKR----KPADLQNLAPGTHPPFITFNSEVKTDV 88
G+ P + + M G+ + ++L+ KP + P P + +
Sbjct: 8 GSAP-CRSVLMTAKALGIELNKKLLNLQAGEHLKPE-FLKINPQHTIPTLVDGDFALWES 65
Query: 89 NKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD--------IFAKFSAYIKNS---RPEAN 137
I +L E L PK P+ ++ F+ Y + A+
Sbjct: 66 RAIMVYLVEKYGKTD--SLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAKAPAD 123
Query: 138 EALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHI 197
L + + L+ +L + GD +T+AD LL +
Sbjct: 124 PELFKKIETAFDFLNTFLKGH------------------EYAAGDSLTVADLALLASVST 165
Query: 198 VKVVAKKYRNFDIPK 212
+V +FDI K
Sbjct: 166 FEVA-----SFDISK 175
>3M1G-A nrPDB
Length = 362
Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 83/242 (34%), Gaps = 39/242 (16%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQ----NLAPGTHPPFITFNSEVKTDVN 89
CP++ R + L G+ +V ++ L D++ +L P P + N
Sbjct: 69 ACPWAHRTVITRRLLGLE-NVISLGLTGPTHDVRSWTFDLDPNHLDPVLQIPRLQDAYFN 127
Query: 90 KIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAK----FSAYIKNSRPEANEALERGLL 145
+ ++ P + S + + F+ K E L L
Sbjct: 128 RFPDY------PRGITVPALVEESSKKVVTNDYPSITIDFNLEWKQFHREGAPNLYPAEL 181
Query: 146 KT-----LQKLDEYLNSPLPDEIDENSME----------------DIKFSTRRFLDGDEM 184
+ ++++ +N+ + S E + + STRR+L GD +
Sbjct: 182 REEMAPVMKRIFTEVNNGVYRTGFAGSQEAHNEAYKRLWVALDWLEDRLSTRRYLMGDHI 241
Query: 185 TLADCNLLPKLHIVK-VVAKKYR-NFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEI 242
T AD L P L V ++ + M +W YL + + F +T E++
Sbjct: 242 TEADIRLYPTLVRFDAVYHGHFKCGRNKITEMPNLWGYLRDLFQTPGFGDTT-DFTEIKQ 300
Query: 243 AY 244
Y
Sbjct: 301 HY 302
>3NIV-A nrPDB
Length = 222
Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 10/166 (6%)
Query: 38 SQRLFMILWLKGVVFS---VTTVDLKRKPADLQ--NLAPGTHPPFITFNSEVKTDVNKIE 92
R+ + L LK + + V V+ + LQ + P P + N ++ + I
Sbjct: 14 CYRVRIALNLKKIAYEKIEVHLVNNGGEQHSLQYHQINPQELVPSLDINGQILSQSMAII 73
Query: 93 EFLEEVLCPPKYLKLSPKHP--ESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQK 150
++LEE+ + L PK P ++ M + + N+ N E+ Q
Sbjct: 74 DYLEEIHPE---MPLLPKDPFMKATLKSMALIVACDMHPLNNLRVLNRLKEQFNANEEQV 130
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
L+ Y + + G E+ LAD L+P+++
Sbjct: 131 LEWYHHWLKTGFDAFEEKLGALERDKPVCFGSEVGLADVCLIPQVY 176
>5F0G-A nrPDB
Length = 215
Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 38/188 (20%)
Query: 38 SQRLFMILWLKGVVFSVTTVDL----KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEE 93
+ + M+ G+ + ++ + KP L P P + N + I
Sbjct: 12 CRTVIMVAKALGLELNKKLLNTMEGEQLKPE-FVKLNPQHTIPTLVDNGFSIWESRAIAV 70
Query: 94 FLEEVLCPPKYLKLSPKHPESNTAGMD--------IFAKFSAY----IKNSRPEANEALE 141
+L E Y L P P+ ++ F+ Y + +P ++E L
Sbjct: 71 YLVEKYGKDDY--LLPNDPKKRAVINQRLYFDMGTLYESFAKYYYPLFRTGKPGSDEDL- 127
Query: 142 RGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVV 201
+ + LD +L + ++ GD++T+AD +L + +V
Sbjct: 128 KRIETAFGFLDTFLEG------------------QEYVAGDQLTVADIAILSTVSTFEVS 169
Query: 202 AKKYRNFD 209
+ +
Sbjct: 170 EFDFSKYS 177
>1F2E-A nrPDB
Length = 201
Score = 44.8 bits (104), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 54/207 (26%), Gaps = 36/207 (17%)
Query: 43 MILWLKGVVFSVTTVDLKRKP----ADLQNLAPGTHPPFITFN-SEVKTDVNKIEEFLEE 97
+ L G F VDL + D + P P +T + E T+ I ++ +
Sbjct: 16 IALRETGADFEAVKVDLAVRKTEAGEDFLTVNPSGKVPALTLDSGETLTENPAILLYIAD 75
Query: 98 VLCPPKYLKLSPKHPESNT------AGMDIFAKFS-AYIKNSRPEANEALERGLLKTLQK 150
G + F + + EA A + L
Sbjct: 76 QNPASGLAPAEGSLDRYRLLSRLSFLGSEFHKAFVPLFAPATSDEAKAAAAESVKNHLAA 135
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDI 210
LD+ L R G+ ++AD L V + Y D+
Sbjct: 136 LDKELAG------------------RDHYAGNAFSVADIYL-----YVMLGWPAYVGIDM 172
Query: 211 PKGMTGIWRYLTNAYSRDEFTNTCPSD 237
+ Y R ++
Sbjct: 173 -AAYPALGAYAGKIAQRPAVGAALKAE 198
>6JWK-A nrPDB
Length = 222
Score = 44.4 bits (103), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKR----KPADLQNLAPGTHPPFITFNSEVKTDVN 89
N S R+ + L LKG+ + V V+L++ +PAD Q G P + + +
Sbjct: 8 NSSTSYRVRIALALKGLDYQVVPVNLRQGEQLRPADRQRNPMGALPTLVDADGRRFSQSL 67
Query: 90 KIEEFLEEVLCPPKYLKLSPKHP 112
I ++L+ V P+ + L P H
Sbjct: 68 AIIDYLDAVQPEPRLIPLDPLHR 90
>4PXO-A nrPDB
Length = 238
Score = 44.0 bits (102), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 17/163 (10%)
Query: 40 RLFMILWLKGVVFSVTTVDL----KRKPADLQNLAPGTHPPFITF-NSEVKTDVNKIEEF 94
R+ + L LKG+ + +DL + KP D + P P + + T I ++
Sbjct: 37 RVRIALNLKGIAYEEVFLDLDAGDQHKP-DFLAINPQGAVPALFDGDGPPLTQSLAILDY 95
Query: 95 LEEVLCPPKYLKLSPKHPE-----SNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQ 149
LEE L P+ + D + ++ E N L R +
Sbjct: 96 LEETRTGVPLLPEEPRARARARSLAQVVACDTHPLYVPRVRTFLME-NYGLPRERMLEFL 154
Query: 150 KLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLL 192
+ N+ + + + T RF GD ++ AD L+
Sbjct: 155 R-----NAFITGLKTLETRLSNEAGTGRFCQGDAVSHADLCLI 192
>2GDR-A nrPDB
Length = 202
Score = 44.0 bits (102), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 22/166 (13%)
Query: 33 GNCPFSQRLFMILWLKGVVFSVTTVDLKRKP----ADLQNLAPGTHPPFI-TFNSEVKTD 87
G C S + L G+ F + VDL K D + P + P + + T+
Sbjct: 8 GACSLSPHI--ALREAGLNFELVQVDLASKKTASGQDYLEVNPAGYVPCLQLDDGRTLTE 65
Query: 88 VNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKF--SAYIKNSRPEANEALERGLL 145
I +++ + + + L+P + + + F S K+ P N A
Sbjct: 66 GPAIVQYVADQVPGKQ---LAPANGSFERYHLQQWLNFISSELHKSFSPLFNPASS---- 118
Query: 146 KTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNL 191
DE+ N+ + +L GD++++AD L
Sbjct: 119 ------DEWKNAVRQSLNTRLGQVARQLEHAPYLLGDQLSVADIYL 158
>1AXD-A nrPDB
Length = 209
Score = 43.6 bits (101), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 62/201 (30%), Gaps = 20/201 (9%)
Query: 40 RLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLE 96
R L G + + ++ + K + P P + + I ++
Sbjct: 16 RCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAA 75
Query: 97 EVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLL---KTLQKLDE 153
P + + + E+ + I + + Y P + L +L + +DE
Sbjct: 76 RKNKPELLREGNLE--EAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDE 133
Query: 154 YLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRN--FDIP 211
L + + + + ++L GD ++LAD L+ V V + +
Sbjct: 134 NL----EKLKKVLEVYEARLTKCKYLAGDFLSLAD------LNHVSVTLCLFATPYASVL 183
Query: 212 KGMTGIWRYLTNAYSRDEFTN 232
+ + + R
Sbjct: 184 DAYPHVKAWWSGLMERPSVQK 204
>4PTS-A nrPDB
Length = 348
Score = 43.2 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 78/243 (32%), Gaps = 40/243 (16%)
Query: 34 NCPFSQRLFMILWLKGV--VFSVTTVD-LKRKPADLQNLAPGTHPPFITFNSEVKTDVNK 90
CP++ R ++ L G+ V S+ K + +L PG P + +
Sbjct: 55 ACPWANRTLIVRRLLGLENVLSLGLCGPTHDKNSWTFDLDPGGVDPVLGI--------PR 106
Query: 91 IEEFLEEVLC--PPKYLKLSPKHPESNTAGMDIFAKFSA-YIKNSRPEANEALERGLLKT 147
+++ E+ P + + + F + + + + + +
Sbjct: 107 LKDAYEKRFPGYPKGITVPAVVEIATGEVVTNDFPQITIDFSLEWTAYHRDGAPQLYPEH 166
Query: 148 LQKLDEYLNSPLPDEID------------------------ENSMEDIKFSTRRFLDGDE 183
L+ + ++ + E++ + + + +R+L GD
Sbjct: 167 LRAEIDEVSKGIYTEVNNGVYRCGFAGSQDAYDAAYDRLFTKLDELSERLAQQRYLVGDT 226
Query: 184 MTLADCNLLPKLHIVK-VVAKKYR-NFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVE 241
+T AD L L V ++ N M +W Y + + F +T + +
Sbjct: 227 ITEADVRLFTTLARFDAVYHGHFKCNRSKLSEMPVLWAYARDLFQTPGFGDTTDFTQIKQ 286
Query: 242 IAY 244
Y
Sbjct: 287 HYY 289
>5A5K-A nrPDB
Length = 212
Score = 42.9 bits (99), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 56/166 (33%), Gaps = 7/166 (4%)
Query: 39 QRLFMILWLKGVVFSVTTVDLKR---KPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFL 95
+R+ + L K + F + V+LK K + P P + I +++
Sbjct: 16 RRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYI 75
Query: 96 EEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYL 155
+ L ++ + + P A++ + K++ L
Sbjct: 76 AHRY-ENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDE 134
Query: 156 NSPLPDEIDENSMEDIKFSTRR---FLDGDEMTLADCNLLPKLHIV 198
+E + D+ + + +L G+ TL D + +P + +
Sbjct: 135 AVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYL 180
>3IR4-A nrPDB
Length = 218
Score = 42.9 bits (99), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 12/183 (6%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEE 93
+CPF + MI LK + + + + + + P +S + I
Sbjct: 11 HCPFCVKARMIFGLKNIPVELNVLQNDDEATPTRMIGQKMVPILQKDDSRYLPESMDIVH 70
Query: 94 FLEEVLCPP-----KYLKLSPKHPESNTAGMDI----FAKFSAYIKNSRPEANEALERGL 144
+++ + P + + + N + FAK SA+ + S P A + R
Sbjct: 71 YVDNLDGKPLLTGKRNPAIEEWLRKVNGYVNQLLLPRFAK-SAFDEFSTPAARQYFIRKK 129
Query: 145 LKTLQKLDEYL--NSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVA 202
+ D +L ++ L +I ++ K + E++ D +L P L + +VA
Sbjct: 130 EASSGSFDNHLAHSAGLIKKIGDDLRLLDKLIVQPNAVNGELSEDDIHLFPLLRNLTLVA 189
Query: 203 KKY 205
+
Sbjct: 190 GIH 192
>1U3I-A nrPDB
Length = 211
Score = 42.5 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 23/206 (11%)
Query: 39 QRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNS-----EVKTDVNKIEE 93
+ + M L GV + + + P ++ PG P + + + I
Sbjct: 18 ESIRMTLVAAGVDYEDERISFQDWPK-IKPTIPGGRLPAVKVTDDHGHVKWMLESLAIAR 76
Query: 94 FLEEVLCPPKYLKLSPKHPESNTAG---MDIFAKFSAYIKNSRPEANEALERGLLKTLQK 150
++ + + ++ D+ ++ + + E + +
Sbjct: 77 YMAKK--HHMMGETDEEYYSVEKLIGQAEDVEHEYHKTLMKPQEEKEKITK--------- 125
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDI 210
E LN +P + E +K ST + GD++TLAD L+ + V + K +
Sbjct: 126 --EILNGKVP-VLFNMICESLKGSTGKLAVGDKVTLADLVLIAVIDHVTDLDKGFLTGKY 182
Query: 211 PKGMTGIWRYLTNAYSRDEFTNTCPS 236
P+ L ++ ++ + P+
Sbjct: 183 PEIHKHRENLLASSPRLAKYLSNRPA 208
>6N0I-A nrPDB
Length = 706
Score = 42.5 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 63/175 (36%), Gaps = 13/175 (7%)
Query: 74 HPPFITFNSEVK---TDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIK 130
H P + + +++ D ++ + +++ L E N G K A
Sbjct: 138 HVPRLAYINKMDRQGADFLRVVKQIDQRLGHHPVPIQLAIGSEENFMGQIDLVKMKAIYW 197
Query: 131 NSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCN 190
N + E + L+ L + + + E + E T +FLDG+E+++ +
Sbjct: 198 NDADQGTSYREEEIPAELKALADEWRAH----MIEAAAEANDELTMKFLDGEELSIEEIK 253
Query: 191 LLPKLHIV------KVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKE 239
+ + ++ ++N +P + + YL T P D+E
Sbjct: 254 AGLRQRTIANEIVPTILGSSFKNKGVPLMLDAVIDYLPAPSEIPAIRGTDPDDEE 308
>2GLR-A nrPDB
Length = 209
Score = 42.5 bits (98), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 63/205 (30%), Gaps = 21/205 (10%)
Query: 38 SQRLFMILWLKGVVFSVTTVDLKRKPADLQN-LAPGTHPPFITFNSEVKTDVNKIEEFLE 96
+ + M+L +G + V + L P N I L
Sbjct: 14 CEAMRMLLADQGQSWKEEVVTIDTWMQGLLKPTCLYGQLPKFEDGDLTLYQSNAILRHLG 73
Query: 97 EVLC-PPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYL 155
L K + + + N D+ K+ I + + L L+ + L
Sbjct: 74 RSLGLYGKNQREAAQMDMVNDGVEDLRGKYVTLIYTNYENGKNDYVKALPGHLKPFETLL 133
Query: 156 NSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMT 215
+ + F+ GD+++ AD NLL L I +V+A +
Sbjct: 134 SQ--------------NQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLD-----NFP 174
Query: 216 GIWRYLTNAYSRDEFTNTCPSDKEV 240
+ Y+ +R + S + V
Sbjct: 175 LLSAYVARLSARPKIKAFLSSPEHV 199
>2CA8-A nrPDB
Length = 211
Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 27/196 (13%)
Query: 39 QRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNS-----EVKTDVNKIEE 93
+ + M L GV + + + P ++ PG P + + + I
Sbjct: 18 ESIRMTLVAAGVNYEDERISFQDWPK-IKPTIPGGRLPAVKITDNHGHVKWMVESLAIAR 76
Query: 94 FLEEVLCPPKYLKLSPKHPESNTAG---MDIFAKFSAYIKNSRPEANEALERGLLKTLQK 150
++ + ++ D+ ++ + E +
Sbjct: 77 YMAKK--HHMMGGTEEEYYNVEKLIGQAEDLEHEYYKTLMKPEEEKQ-----------KI 123
Query: 151 LDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDI 210
+ E LN +P +D E +K ST + GD++TLAD L+ + V + K++
Sbjct: 124 IKEILNGKVPVLLD-IICESLKASTGKLAVGDKVTLADLVLIAVIDHVTDLDKEFLTGKY 182
Query: 211 PKGMTGIWRYLTNAYS 226
P+ I ++ N +
Sbjct: 183 PE----IHKHRENLLA 194
>1V2A-A nrPDB
Length = 210
Score = 42.1 bits (97), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 69/220 (31%), Gaps = 44/220 (20%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPAD--LQNLAPGTHPPFITFNSEVKTDVNKIE 92
P Q ++ G+ ++ ++ L L P P + N V + I
Sbjct: 9 SPPCQSAILLAKKLGITLNLKKTNVHDPVERDALTKLNPQHTIPTLVDNGHVVWESYAIV 68
Query: 93 EFLEEVLCPPKYLKLSPKHPESNTAGMD-IFAKFSAYIK----------NSRPEANEALE 141
+L E L PK P+ + +F K ++E +E
Sbjct: 69 LYLVETYAKDD--TLYPKDPKVRSVVNQRLFFDIGTLYKRIIDVIHLVMKKEQPSDEQME 126
Query: 142 RGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVV 201
+ L L L++++ R + D +T+AD LL V
Sbjct: 127 K-LKGALDLLEQFVT------------------ERAYAAADHLTVADICLLG-----TVT 162
Query: 202 AKKYRNFDIPKGMTGIWRYLTNAYSR----DEFTNTCPSD 237
A + D+ + I +L + +EF+ D
Sbjct: 163 ALNWLKHDL-EPFPHIRAWLERVRAEMPDYEEFSKQVADD 201
>3VWX-A nrPDB
Length = 222
Score = 42.1 bits (97), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 57/206 (27%), Gaps = 17/206 (8%)
Query: 32 IGNCPFSQRLFMILWLKGVVFSVTTVDLKRK---PADLQNLAPGTHPPFITFNSEVKTDV 88
I P + + L + F V+L K + P P + + + D
Sbjct: 9 IDPSPPVRACLLTLKALNLPFEYKVVNLFAKEHLSEEYLKKNPQHTVPTLEEDGHLIWDS 68
Query: 89 NKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTL 148
+ I +L L + F + R R
Sbjct: 69 HAIMAYLVSKYGKDDSLYPKDLLKRAVVDQRMYFEAGVLFQGGLRNITAPLFFRN----- 123
Query: 149 QKLDEYLNSPLPDEIDENSMEDIKF-STRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRN 207
+ D I E+ F +++ GD +T+AD +++ + +
Sbjct: 124 ---QTQIPQHQIDSIVESYGFLESFLKNNKYMAGDHLTIADFSIVTSV----TSLVAFAE 176
Query: 208 FDIPKGMTGIWRYLTNAYSRDEFTNT 233
D K + +L + S +
Sbjct: 177 IDQSK-FPKLSAWLKSLQSLPFYEEA 201
>3PR8-A nrPDB
Length = 229
Score = 40.9 bits (94), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 58/173 (33%), Gaps = 8/173 (4%)
Query: 43 MILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPP 102
+ L KG+ F T + P L ++P P + ++ + I +++E+
Sbjct: 19 LALLEKGLTFEEVTFYGGQAPQAL-EVSPRGKVPVLETEHGFLSETSVILDYIEQT---Q 74
Query: 103 KYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDE 162
L P P ++ + YI+ G+ + E + D
Sbjct: 75 GGKALLPADPFGQAKVRELLKEIELYIELPARTCYAESFFGMSVEPL-IKEKARA---DL 130
Query: 163 IDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMT 215
+ + ++ G+++TLAD + + V KK N D
Sbjct: 131 LAGFATLKRNGRFAPYVAGEQLTLADLMFCFSVDLANAVGKKVLNIDFLADFP 183
>6GZF-A nrPDB
Length = 341
Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 170 DIKFSTRRFLDGDEMTLADCNLLPKLHIVK-VVAKKY-RNFDIPKGMTGIWRYLTNAYSR 227
D + +R+L GD +T AD + L V + N + +W YL + Y
Sbjct: 222 DDVLADQRYLAGDRLTEADIAMFTTLVRFDNVYHTHFMCNVQYIREFDNLWPYLRDLYQT 281
Query: 228 DEFTNTCPSDKEVEIAY 244
T D E Y
Sbjct: 282 HGIAETVEMDHITEHYY 298
>18GS-A nrPDB
Length = 210
Score = 38.2 bits (87), Expect = 0.003, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 63/208 (30%), Gaps = 27/208 (12%)
Query: 38 SQRLFMILWLKGVVFSVTTVDLKRKPA-DLQNLAPGTHPPFITFNSEVKTDVNKIEEFLE 96
L M+L +G + V ++ L+ P N I L
Sbjct: 15 CAALRMLLADQGQSWKEEVVTVETWQEGSLKASCLYGQLPKFQDGDLTLYQSNTILRHLG 74
Query: 97 EVLCPPKYLKLSPKHPE----SNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLD 152
L + N D+ K+ + I + + + L L+ +
Sbjct: 75 RTL---GLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYVKALPGQLKPFE 131
Query: 153 EYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPK 212
L+ + F+ GD+++ AD NLL L I +V+A +
Sbjct: 132 TLLSQ--------------NQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLD----- 172
Query: 213 GMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
+ Y+ +R + S + V
Sbjct: 173 AFPLLSAYVGRLSARPKLKAFLASPEYV 200
>2C3Q-A nrPDB
Length = 247
Score = 38.2 bits (87), Expect = 0.003, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 27/175 (15%)
Query: 38 SQRLFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEF 94
+ +++ + F + VDL + + P P + T+ I +
Sbjct: 21 CRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPLKKVPALKDGDFTLTESVAILLY 80
Query: 95 LEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEA------------NEALER 142
L P Y P+ ++ + A ++ S A +
Sbjct: 81 LTRKYKVPDYW--YPQDLQARARVDEYLAWQHTTLRRSCLRALWHKVMFPVFLGEPVSPQ 138
Query: 143 GLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHI 197
L TL +LD + +ED + FL G ++LAD + +L
Sbjct: 139 TLAATLAELD----------VTLQLLEDKFLQNKAFLTGPHISLADLVAITELMH 183
>1G6W-A nrPDB
Length = 261
Score = 37.5 bits (85), Expect = 0.006, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 71/243 (29%), Gaps = 47/243 (19%)
Query: 33 GNCPFSQR-------LFMILWLKGVVFSVTTVDL---KRKPADLQNLAPGTHPPFITF-- 80
G FS R + ++L G ++ +D + + + ++ P P +
Sbjct: 20 GYTLFSHRSAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHG 79
Query: 81 -NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD---IFAK------------ 124
++ + I L L ++ + ++ F
Sbjct: 80 MDNLSIWESGAILLHLVNKYYKETGNPLLWSDDLADQSQINAWLFFQTSGHAPMIGQALH 139
Query: 125 FSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSME--------DIKFSTR 176
F + A E + + ++ L + E E S
Sbjct: 140 FRYFHSQKIASAVERYTDEVRRVYGVVEMALAERREALVMELDTENAAAYSAGTTPMSQS 199
Query: 177 RFLD------GDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEF 230
RF D GD++T+AD +P ++V + +I ++++ + R
Sbjct: 200 RFFDYPVWLVGDKLTIADLAFVPWNNVVDRI-----GINIKIEFPEVYKWTKHMMRRPAV 254
Query: 231 TNT 233
Sbjct: 255 IKA 257
>4MDC-A nrPDB
Length = 252
Score = 35.5 bits (80), Expect = 0.019, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 59/215 (27%), Gaps = 35/215 (16%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNS-EVKTDVNKIEE 93
P S+ + +IL G ++ D L P P +S I E
Sbjct: 32 SPASRFVRLILSEYGYQTELSEEQPWENRRDFLTLNPAGTLPVYVDDSMRALCGATIISE 91
Query: 94 FLEEVLC----PPKYLKLSP-KHPESNTAGMDIFAKFSAYIKNS-----------RPEAN 137
+L+E + L P + E K A + P+
Sbjct: 92 YLDETSGIMKRDRRLLAEDPFQRAEIRRLTEWFLQKMEADVTRPLVRERIFKLQMTPDQG 151
Query: 138 EALE--RGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKL 195
+ L + + +++ +R +L GD ++ D +
Sbjct: 152 GGAPDSKILRTSRSNIRQHMKYL-----------SWLAGSRPWLAGDRISYGDLAAAAAI 200
Query: 196 HIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEF 230
++ + + ++ + SR F
Sbjct: 201 SVLDYLGE--IDWS---DAPTAKEWYQRLKSRPSF 230
>4FN5-A nrPDB
Length = 709
Score = 35.5 bits (80), Expect = 0.021, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 15/194 (7%)
Query: 57 VDLKRKPADLQNLAPGTHPPFITFN--SEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPES 114
V+ + + + P + N + ++ E +++ L E
Sbjct: 122 VEPQSETVW-RQANKYGVPRIVYVNKMDRQGANFLRVVEQIKKRLGHTPVPVQLAIGAEE 180
Query: 115 NTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSM------ 168
N G K A N + E + L+ L E S + + E +
Sbjct: 181 NFVGQVDLIKMKAIYWNDDDKGMTYREEEIPAELKDLAEEWRSSMVEAAAEANEELMNKY 240
Query: 169 -EDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSR 227
E+ + S +G + C ++P V ++N +P + + YL
Sbjct: 241 LEEGELSEAEIKEGLRLRTLACEIVP-----AVCGSSFKNKGVPLVLDAVIDYLPAPTEI 295
Query: 228 DEFTNTCPSDKEVE 241
P D+ VE
Sbjct: 296 PAIKGVSPDDETVE 309
>4USS-A nrPDB
Length = 325
Score = 35.2 bits (79), Expect = 0.030, Method: Composition-based stats.
Identities = 40/252 (15%), Positives = 76/252 (30%), Gaps = 47/252 (18%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTH-----PPFITFNSEVKTDV 88
CP++ R L +KG+ KP + H P T + + D
Sbjct: 48 ACPWASRCLAYLKIKGL--EKAIAFTSVKPIWERTKESDEHMGWVFPASETEEAGAEPDT 105
Query: 89 N----KIEEFLE--EVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALER 142
I E E KY + T + + S I+ E N+ E
Sbjct: 106 LNGARSIRELYELASTNYAGKYTVPVLWDKKLKTIVNN---ESSEIIRMFNTEFNDIAEN 162
Query: 143 GLLK----TLQKL------------------DEYLNSPLPDE------IDENSMEDIKFS 174
L LQ + P E + +
Sbjct: 163 AALDLYPSHLQAQIDETNGWVYDGINNGVYKCGFARKQGPYEEAAIQLYEALDKCEEILG 222
Query: 175 TRRFLDGDEMTLADCNLLPKLHIV-KVVAKKYR-NFDIPKGMTGIWRYLTNAYSRDEFTN 232
+R++ G+ ++ AD L L +V A ++ N + + ++ Y + + ++
Sbjct: 223 RQRYICGNTLSEADIKLFVTLIRFDEVYAVHFKCNKKLLRDYPNMFNYTKDIFQIPGMSS 282
Query: 233 TCPSDKEVEIAY 244
T + + ++ Y
Sbjct: 283 TV-NMQHIKRHY 293
>2IL3-A nrPDB
Length = 221
Score = 34.8 bits (78), Expect = 0.037, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Query: 35 CPFSQRLFMILWLKGVVFSVTTVDLKR----KPADLQNLAPGTHPPFITFNSEVKTDVNK 90
P + + + G+ T++L KP L P P + N + T+ +
Sbjct: 12 SPPCRAVELTAKALGLELEQKTINLLTGDHLKPE-FVKLNPQHTIPVLDDNGTIITESHA 70
Query: 91 IEEFLEEVLCPPK--YLKLSPKHPESNTAG 118
I +L Y K K N+A
Sbjct: 71 IMIYLVTKYGKDDSLYPKDPVKQARVNSAL 100
>4LMW-A nrPDB
Length = 251
Score = 34.4 bits (77), Expect = 0.048, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 75/209 (35%), Gaps = 33/209 (15%)
Query: 26 GSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNL-APGTH---------- 74
++ + P + + +L KG+ + V+ A + + AP T
Sbjct: 13 ANEPRQMAWGPNTWKTRYVLNFKGLKYRTEWVEYPDIEAVCKQIGAPATEKKPDGRDHYT 72
Query: 75 PPFITF--NSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESN----------TAGMDIF 122
P I V D + I ++LE P +L P+ + + M IF
Sbjct: 73 LPVIQDPNTKAVVADSDAIAKYLESTY--PDTPRLFPEGTRAFQHAFYQLARPSVLMPIF 130
Query: 123 AKFSAYI-KNSRPEANE----ALERGLLKTLQKL---DEYLNSPLPDEIDENSMEDIKFS 174
A + K RP + E E+ L K L+++ D++ ++S+E
Sbjct: 131 NIVVARVWKLLRPRSQEYFRATREQMLGKKLEEIGSEDDWNALESGLARIKSSLEANGAG 190
Query: 175 TRRFLDGDEMTLADCNLLPKLHIVKVVAK 203
L GD +T AD L ++V A
Sbjct: 191 KDLLLMGDRVTFADLQLASLFIWLRVSAG 219
>2PVQ-A nrPDB
Length = 201
Score = 34.0 bits (76), Expect = 0.057, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 28/157 (17%)
Query: 43 MILWLKGVVFSVTTVDLKRKPA----DLQNLAPGTHPPFI-TFNSEVKTDVNKIEEFLEE 97
+IL G+ + + VDLK K D + P P + V T I +++ +
Sbjct: 16 IILSEAGLPYELEAVDLKAKKTADGGDYFAVNPRGAVPALEVKPGTVITQNAAILQYIGD 75
Query: 98 -----VLCPPKYLKLSPKHPESNTAGMDIFAKFS-AYIKNSRPEANEALERGLLKTLQKL 151
P + E+ D+ A FS + N EA + + + L +L
Sbjct: 76 HSDVAAFKPAYGSIERARLQEALGFCSDLHAAFSGLFAPNLSEEARAGVIANINRRLGQL 135
Query: 152 DEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLAD 188
+ L+ + GD+ T D
Sbjct: 136 EAMLSD-----------------KNAYWLGDDFTQPD 155
>2PPQ-A nrPDB
Length = 322
Score = 33.6 bits (75), Expect = 0.077, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 27/57 (47%)
Query: 129 IKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMT 185
+ + E + +E+GL + ++ +YL + P ++ + F F GDE++
Sbjct: 151 LWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELS 207
>4FQU-A nrPDB
Length = 313
Score = 32.1 bits (71), Expect = 0.23, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 30/144 (20%)
Query: 75 PPFI---TFNSEVKTDVNKIEEFL----EEVLCPPKYLKLSPKHPESNTAGMDIFAKFSA 127
P + + + ++I L ++V P + PE + ++ +
Sbjct: 122 IPILWDKVEKRILNNESSEIIRILNSAFDDVGALPGDYYPAEFRPEIDRINARVYETLNN 181
Query: 128 YI-KNSRPEANEALERG---LLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDE 183
+ ++ EA E L TL L+E+L R +L GD
Sbjct: 182 GVYRSGFATTQEAYEEAFYPLFDTLDWLEEHLTG------------------REWLVGDR 223
Query: 184 MTLADCNLLPKLHIVKVVA-KKYR 206
+T AD L P L + ++
Sbjct: 224 LTEADIRLFPTLVRFDAIYHGHFK 247
>3PL2-A nrPDB
Length = 319
Score = 30.9 bits (68), Expect = 0.48, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Query: 31 SIGNCPFSQRLFMILWLKGVVFS-VTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVN 89
+GN PF + L L GV V T + P + P P + D+N
Sbjct: 63 RVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLN 122
Query: 90 K 90
Sbjct: 123 I 123
>2PBJ-A nrPDB
Length = 290
Score = 30.9 bits (68), Expect = 0.50, Method: Composition-based stats.
Identities = 16/131 (12%), Positives = 39/131 (29%), Gaps = 21/131 (16%)
Query: 34 NCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFIT----FNSEVKTDVN 89
CPF ++ L + + V V+ + + P + +S+ D +
Sbjct: 22 TCPFCSKVRAFLDFHALPYQVVEVNPVLRAE--IKFSSYRKVPILVAQEGESSQQLNDSS 79
Query: 90 KIEEFLEEVLCP-----------PKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANE 138
I L+ L P ++ + E G K+ + +
Sbjct: 80 VIISALKTYLVSGQPLEEIITYYPAMKAVNDQGKEVTEFGN----KYWLMLNEKEAQQVY 135
Query: 139 ALERGLLKTLQ 149
+ + + ++
Sbjct: 136 SGKEARTEEMK 146
>6GCB-A nrPDB
Length = 325
Score = 30.5 bits (67), Expect = 0.64, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 137 NEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLH 196
N + + T Q+ E PL + +D + + + +L GD++T AD L +
Sbjct: 189 NNGVYKAGFATTQQAYEAAVIPLFESLDRL---EKILTGKDYLVGDQLTEADVRLFVTII 245
Query: 197 IVKVV-AKKYRN--FDIPKGMTGIWRYLTNAY-SRDEFTNTCPSDKEVEIAY 244
++ I G I +L Y + F+ TC D ++ +Y
Sbjct: 246 RFDPAYVGHFKCNLRTIRDGYPAIHLWLRKLYWNNSAFSETCKFD-HIKASY 296
>3QMX-A nrPDB
Length = 99
Score = 30.1 bits (66), Expect = 0.95, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 23 VKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVD 58
V A + + CPF R +L KGV F +D
Sbjct: 14 VSAKIEIYTWSTCPFCMRALALLKRKGVEFQEYCID 49
>4G0L-A nrPDB
Length = 328
Score = 29.4 bits (64), Expect = 1.6, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 75/244 (30%), Gaps = 42/244 (17%)
Query: 34 NCPFSQRLFMILWLKGV-VF-SVTTVD--LKRKPADLQNLAPGTHPPFITFNSEVKTDVN 89
CP++ R ++ LKG+ F SV+ V+ + + PG +
Sbjct: 62 ACPWAHRTLIMRKLKGLEPFISVSVVNPLMLENGWTFDDSFPGA-------TGDTLYQNE 114
Query: 90 KIEEFLEEVLCPPKYLKLSPK--HPESNTAGMD----IFAKFSAYIKNSRPEANEALERG 143
+ + P +++T + I F+ +A +
Sbjct: 115 FLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAGDYYPPA 174
Query: 144 LLKTLQKLDEYL---------------NSPLPDEIDENSME-----DIKFSTRRFLDGDE 183
L + +L+ ++ + DE E + R+L G++
Sbjct: 175 LQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQ 234
Query: 184 MTLADCNLLPKLHIVK-VVAKKYR--NFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEV 240
+T AD L L V ++ I + ++ +L + Y T D +
Sbjct: 235 LTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYL-NLYGFLRDIYQMPGIAETVNFD-HI 292
Query: 241 EIAY 244
Y
Sbjct: 293 RNHY 296
>6A94-A nrPDB
Length = 376
Score = 28.6 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 17/41 (41%)
Query: 206 RNFDIPKGMTGIWRYLTNAYSRDEFTNTCPSDKEVEIAYSD 246
+ +P + +W YL +S + + C + +A +
Sbjct: 73 YRWPLPSKLCAVWIYLDVLFSTAKIWHLCAISLDRYVAIQN 113
>4IP6-A nrPDB
Length = 132
Score = 27.4 bits (59), Expect = 6.0, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 10/76 (13%)
Query: 111 HPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMED 170
P+ A D + + AN+A + LLK L L P D E
Sbjct: 52 DPQVQKALAD------TVLLAANVTANDAQDVALLKHLNV----LGLPTILFFDGQGQEH 101
Query: 171 IKFSTRRFLDGDEMTL 186
+ F+D + +
Sbjct: 102 PQARVTGFMDAETFSA 117
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.306 0.124 0.309
Lambda K H
0.267 0.0381 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,591,219
Number of Sequences: 36641
Number of extensions: 317642
Number of successful extensions: 1031
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 881
Number of HSP's gapped (non-prelim): 130
length of query: 253
length of database: 10,336,785
effective HSP length: 95
effective length of query: 158
effective length of database: 6,855,890
effective search space: 1083230620
effective search space used: 1083230620
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 58 (27.1 bits)