BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9QUI0 (193 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5C2K-A nrPDB 405 e-114 5ZHX-e nrPDB 398 e-112 5JCP-B nrPDB 375 e-105 2FV8-A nrPDB 336 3e-93 5ZVP-A nrPDB 282 5e-77 3A58-B nrPDB 278 9e-76 3TH5-A nrPDB 221 2e-58 3RYT-C nrPDB 218 1e-57 2WKQ-A nrPDB 214 1e-56 3VHL-B nrPDB 210 3e-55 2J1L-A nrPDB 210 3e-55 1RYH-A nrPDB 209 9e-55 2ATX-A nrPDB 207 3e-54 2W2X-A nrPDB 206 4e-54 5VCU-A nrPDB 205 9e-54 1M7B-A nrPDB 204 2e-53 1GWN-A nrPDB 203 4e-53 4MIT-A nrPDB 196 5e-51 2J0V-A nrPDB 190 3e-49 2WBL-C nrPDB 190 3e-49 3BWD-D nrPDB 187 3e-48 2NTY-C nrPDB 185 1e-47 2Q3H-A nrPDB 184 1e-47 4U5X-A nrPDB 181 1e-46 3REG-A nrPDB 170 4e-43 2REX-B nrPDB 170 4e-43 5HZH-A nrPDB 161 2e-40 1Z0A-A nrPDB 97 6e-21 4G01-B nrPDB 96 1e-20 2EW1-A nrPDB 95 1e-20 5SZH-B nrPDB 94 5e-20 2RHD-A nrPDB 93 7e-20 1YZU-A nrPDB 93 7e-20 3L0I-B nrPDB 93 7e-20 2A5J-A nrPDB 92 1e-19 6IF2-B nrPDB 92 1e-19 4LHX-A nrPDB 91 2e-19 5SZI-A nrPDB 91 3e-19 6O62-A nrPDB 91 3e-19 3CPH-A nrPDB 91 3e-19 2OCY-C nrPDB 90 5e-19 4RKE-A nrPDB 89 9e-19 2WWX-A nrPDB 89 1e-18 2G6B-A nrPDB 89 1e-18 4QXA-A nrPDB 88 2e-18 2KE5-A nrPDB 88 2e-18 1WMS-A nrPDB 88 3e-18 2OCB-A nrPDB 87 4e-18 5LPN-A nrPDB 87 4e-18 1X3S-A nrPDB 87 5e-18 3RAB-A nrPDB 87 5e-18 5SZJ-A nrPDB 86 8e-18 3DZ8-A nrPDB 86 1e-17 2F9L-A nrPDB 86 1e-17 2GF9-A nrPDB 85 2e-17 4M8N-E nrPDB 85 2e-17 4FMC-F nrPDB 85 2e-17 1TU4-A nrPDB 85 2e-17 4RKF-A nrPDB 84 3e-17 1ZC4-A nrPDB 83 6e-17 1ZBD-A nrPDB 83 7e-17 1YZN-A nrPDB 83 9e-17 3CUE-F nrPDB 82 1e-16 5FBL-B nrPDB 82 1e-16 4DXA-A nrPDB 82 1e-16 2FFQ-A nrPDB 82 1e-16 5UB8-A nrPDB 82 1e-16 1EK0-A nrPDB 82 1e-16 4KYI-B nrPDB 82 2e-16 4UJ4-A nrPDB 81 2e-16 2IL1-A nrPDB 81 3e-16 5YOZ-A nrPDB 81 3e-16 5XR6-A nrPDB 80 4e-16 2HEI-A nrPDB 80 5e-16 4KU4-A nrPDB 80 5e-16 5CM8-B nrPDB 80 6e-16 1Z22-A nrPDB 79 1e-15 2HUP-A nrPDB 79 1e-15 1Z0F-A nrPDB 79 1e-15 2GIL-A nrPDB 78 2e-15 2P5S-A nrPDB 77 5e-15 2ERX-A nrPDB 77 5e-15 3T5G-A nrPDB 76 7e-15 5LDD-C nrPDB 76 9e-15 2FG5-A nrPDB 75 1e-14 5LEF-A nrPDB 75 2e-14 4PHF-A nrPDB 74 4e-14 2BMD-A nrPDB 73 7e-14 3BFK-A nrPDB 73 7e-14 1Z06-A nrPDB 73 8e-14 2N1B-A nrPDB 73 9e-14 2G77-B nrPDB 72 1e-13 2O52-A nrPDB 72 1e-13 5WDQ-A nrPDB 72 2e-13 2F7S-A nrPDB 72 2e-13 5UWI-A nrPDB 72 2e-13 5CLL-A nrPDB 72 2e-13 4KLZ-A nrPDB 71 2e-13 3CPJ-B nrPDB 71 2e-13 5XOJ-A nrPDB 71 4e-13 2IEY-A nrPDB 70 5e-13 1D5C-A nrPDB 70 7e-13 2IEZ-A nrPDB 70 8e-13 3WYF-A nrPDB 69 1e-12 3BC1-A nrPDB 69 1e-12 3RWM-B nrPDB 68 2e-12 2GF0-A nrPDB 68 2e-12 6HUF-A nrPDB 68 2e-12 4WA7-A nrPDB 68 3e-12 3CON-A nrPDB 68 3e-12 3OES-A nrPDB 68 3e-12 2ERY-A nrPDB 67 4e-12 5WDR-A nrPDB 67 7e-12 6IYB-A nrPDB 65 2e-11 5UHV-A nrPDB 65 2e-11 3CBQ-A nrPDB 65 2e-11 2ATV-A nrPDB 64 3e-11 1YVD-A nrPDB 64 6e-11 2FN4-A nrPDB 62 1e-10 3E5H-A nrPDB 62 1e-10 3RAP-R nrPDB 61 3e-10 3TSO-A nrPDB 60 7e-10 3Q85-A nrPDB 58 3e-09 4DJT-A nrPDB 57 4e-09 3PIR-A nrPDB 56 9e-09 3CLV-A nrPDB 54 3e-08 5C1S-A nrPDB 52 1e-07 2NZJ-A nrPDB 50 5e-07 5XC3-A nrPDB 49 1e-06 2CJW-A nrPDB 49 1e-06 4CZ2-A nrPDB 49 2e-06 6FF8-A nrPDB 48 2e-06 2G3Y-A nrPDB 48 2e-06 2AL7-A nrPDB 47 6e-06 3C5C-A nrPDB 46 1e-05 3D6T-B nrPDB 43 7e-05 2LKD-A nrPDB 43 8e-05 3Q72-A nrPDB 43 1e-04 4ILE-A nrPDB 42 1e-04 2YC4-C nrPDB 42 1e-04 3LRP-A nrPDB 38 0.003 2H16-A nrPDB 37 0.004 4YLG-A nrPDB 37 0.005 1YZG-A nrPDB 37 0.006 2GAO-A nrPDB 35 0.024 5UF8-A nrPDB 34 0.031 2H57-A nrPDB 34 0.046 4WNR-A nrPDB 34 0.046 6FAE-B nrPDB 33 0.062 3AQ4-A nrPDB 33 0.062 3O47-A nrPDB 33 0.066 3H2Y-A nrPDB 33 0.066 4V0N-A nrPDB 33 0.073 1M2O-B nrPDB 33 0.075 5NZV-F nrPDB 33 0.094 1F6B-A nrPDB 33 0.095 6GNI-B nrPDB 33 0.11 6CES-A nrPDB 32 0.15 2R82-A nrPDB 31 0.25 5YMX-A nrPDB 31 0.39 2QAG-A nrPDB 30 0.55 2HJR-A nrPDB 30 0.61 3DPU-A nrPDB 30 0.72 3P7M-A nrPDB 30 0.73 3FTQ-A nrPDB 30 0.75 6OIK-A nrPDB 30 0.76 4ND4-A nrPDB 29 0.98 3OKC-A nrPDB 29 1.1 5NTF-A nrPDB 29 1.2 6DQW-A nrPDB 29 1.3 3FSL-A nrPDB 29 1.3 1MOZ-A nrPDB 28 1.8 5WU6-A nrPDB 28 2.3 5WU3-A nrPDB 28 2.7 4PLF-A nrPDB 27 4.9 3EC1-A nrPDB 27 5.1 4K3B-A nrPDB 27 5.2 5LJ5-s nrPDB 27 5.8 6HLU-A nrPDB 27 5.8 4PLW-A nrPDB 27 7.8 4MNK-A nrPDB 26 9.0 >5C2K-A nrPDB Length = 415 Score = 405 bits (1040), Expect = e-114, Method: Compositional matrix adjust. Identities = 192/193 (99%), Positives = 193/193 (100%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 8 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 67 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD Sbjct: 68 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 127 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ Sbjct: 128 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 187 Query: 181 ARRGKKKSGCLIL 193 ARRGKKKSGCL+L Sbjct: 188 ARRGKKKSGCLVL 200 >5ZHX-e nrPDB Length = 198 Score = 398 bits (1022), Expect = e-112, Method: Compositional matrix adjust. Identities = 191/192 (99%), Positives = 192/192 (100%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 6 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 65 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD Sbjct: 66 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 125 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ Sbjct: 126 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 185 Query: 181 ARRGKKKSGCLI 192 ARRGKKKSGCL+ Sbjct: 186 ARRGKKKSGCLV 197 >5JCP-B nrPDB Length = 419 Score = 375 bits (964), Expect = e-105, Method: Compositional matrix adjust. Identities = 179/180 (99%), Positives = 179/180 (99%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 AAIRKKLVIVGDGACGKTCLLIV SKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 240 AAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 299 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL Sbjct: 300 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 359 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA Sbjct: 360 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 419 >2FV8-A nrPDB Length = 207 Score = 336 bits (862), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 158/185 (85%), Positives = 171/185 (92%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + IRKKLV+VGDGACGKTCLLIVFSKD+FPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 22 SMIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 81 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKDL Sbjct: 82 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 141 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 R+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 142 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 201 Query: 182 RRGKK 186 R G + Sbjct: 202 RYGSQ 206 >5ZVP-A nrPDB Length = 181 Score = 282 bits (722), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 134/179 (74%), Positives = 152/179 (84%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MA IR+KLVIVGDGACGKTCLLIV SK FPEVYVPTVFENYVAD+EVDGK VELALWDT Sbjct: 1 MAEIRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDT 60 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQEDYDRLRPLSYPD+ VIL+CF+IDSPDSL+N+ EKW EV HFC +PIILVG KKD Sbjct: 61 AGQEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKD 120 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 LR+D T EL K Q+PV PE+G ++ +IGA+ Y+ECSA+T +GVREVFE ATRAAL Sbjct: 121 LRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3A58-B nrPDB Length = 188 Score = 278 bits (712), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 132/180 (73%), Positives = 152/180 (84%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 +IR+KLVIVGDGACGKTCLLIV SK QFPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 8 SIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG K DLR Sbjct: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 ND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA+L + Sbjct: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 >3TH5-A nrPDB Length = 204 Score = 221 bits (562), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 104/173 (60%), Positives = 127/173 (73%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY Sbjct: 32 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 91 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILVG K DLR+D+ Sbjct: 92 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 151 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 T +L + K P+ +G MA IGA Y+ECSA T+ G++ VF+ A RA L Sbjct: 152 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3RYT-C nrPDB Length = 180 Score = 218 bits (555), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 106/179 (59%), Positives = 129/179 (72%), Gaps = 2/179 (1%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 M AI K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDT Sbjct: 4 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AG EDYDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILVG K D Sbjct: 62 AGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD 121 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 LR+D+ T +L + K P+ +G MA IGA Y+ECSA T+ G++ VF+ A RA L Sbjct: 122 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2WKQ-A nrPDB Length = 332 Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 125/173 (72%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAG EDY Sbjct: 157 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDY 216 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPLSYP TDV L+CFS+ SP S ++ KW PEV+H CPN PIILVG K DLR+D+ Sbjct: 217 DRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 276 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 T +L + K P+ +G MA IGA Y+ECSA T+ G++ VF+ A RA L Sbjct: 277 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 >3VHL-B nrPDB Length = 195 Score = 210 bits (535), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 97/180 (53%), Positives = 125/180 (69%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GK CLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 12 KCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 71 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+D Sbjct: 72 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 131 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKK 186 T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ KK Sbjct: 132 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKK 191 >2J1L-A nrPDB Length = 214 Score = 210 bits (535), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 95/176 (53%), Positives = 122/176 (69%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 95 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC VPII+VG K DLR D+ Sbjct: 96 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKS 155 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 +L + EPV G++MA +GA Y+ECSA+ D V VF+ A AL +R Sbjct: 156 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 211 >1RYH-A nrPDB Length = 203 Score = 209 bits (531), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 107/198 (54%), Positives = 130/198 (65%), Gaps = 21/198 (10%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 M AI K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDT Sbjct: 3 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 60 Query: 61 AGQEDYDRLRPLSYPDT-------------------DVILMCFSIDSPDSLENIPEKWTP 101 AGQEDYDRLRPLSYP T DV L+CFS+ SP S EN+ KW P Sbjct: 61 AGQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYP 120 Query: 102 EVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSA 161 EV+H CPN PIILVG K DLR+D+ T +L + K P+ +G MA IGA Y+ECSA Sbjct: 121 EVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 180 Query: 162 KTKDGVREVFEMATRAAL 179 T+ G++ VF+ A RA L Sbjct: 181 LTQRGLKTVFDEAIRAVL 198 >2ATX-A nrPDB Length = 194 Score = 207 bits (526), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 96/178 (53%), Positives = 128/178 (71%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A+ K V+VGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTA Sbjct: 15 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 74 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G + DL Sbjct: 75 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 134 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 R+D T L MK++P+ E+G+ +A IGA Y+ECSA T+ G++ VF+ A A L Sbjct: 135 RDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 192 >2W2X-A nrPDB Length = 185 Score = 206 bits (525), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 124/173 (71%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGD A GKTCLLI ++ + FP Y+PTVF+NY A++ VD K V L LWDTAGQEDY Sbjct: 11 KCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDY 70 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PIILVG K DLR+D+ Sbjct: 71 DRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKD 130 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 T +L + K P+ +G +A I + Y+ECSA T+ G++ VF+ A RA L Sbjct: 131 TIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >5VCU-A nrPDB Length = 208 Score = 205 bits (522), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 98/176 (55%), Positives = 127/176 (72%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GKT LLI +S FPE YVPTVF+NY +I V +AL+DTAGQEDY Sbjct: 13 KCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQEDY 72 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPLSYPDTDV L+CFS+++P+SLEN KW E+KH+ P+ PI+LVG K DL+ DE Sbjct: 73 DRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKDEE 132 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 ++L + K PV E+G++M ++I A GY+ECSAKT + + E F MA A++ R Sbjct: 133 YVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 >1M7B-A nrPDB Length = 184 Score = 204 bits (519), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 1/178 (0%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 6 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 65 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR Sbjct: 66 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 125 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSA-KTKDGVREVFEMATRAALQ 180 D T EL+ +Q PV ++G +MA +IGA Y+ECSA ++++ VR++F +AT A + Sbjct: 126 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 183 >1GWN-A nrPDB Length = 205 Score = 203 bits (516), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 91/178 (51%), Positives = 131/178 (73%), Gaps = 1/178 (0%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 27 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 86 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR Sbjct: 87 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 146 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSA-KTKDGVREVFEMATRAALQ 180 D T EL+ +Q PV ++G +MA +IGA Y+ECSA ++++ VR++F +AT A + Sbjct: 147 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 204 >4MIT-A nrPDB Length = 186 Score = 196 bits (498), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 89/173 (51%), Positives = 117/173 (67%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV+VGDGA GKTCLLI +S +FPE Y+PTVF+NYV + +Q++LALWDTAG E+Y Sbjct: 12 KLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGLEEY 71 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 D+LRPLSY + L+CFS+ S S +N+ KW PEV HF P VPIILVG K D RND Sbjct: 72 DQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRNDPA 131 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + L + + +G ++ NRI A Y+ECSAKT + ++ VF+ A + L Sbjct: 132 IVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVL 184 >2J0V-A nrPDB Length = 212 Score = 190 bits (483), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 90/195 (46%), Positives = 128/195 (65%), Gaps = 13/195 (6%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG+ V L LWDTAGQEDY Sbjct: 11 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDY 70 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 RLRPLSY D+ ++ FS+ S S EN+ +KW PE++ F PNVPI+LVG K DLR+D+ Sbjct: 71 SRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKG 130 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA----- 181 + + + +G ++ +IGA Y+ECS+KT+ V+ VF+ A + LQ Sbjct: 131 YLADHTNV----ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186 Query: 182 ----RRGKKKSGCLI 192 R+ ++SGC I Sbjct: 187 VPRRRKNHRRSGCSI 201 >2WBL-C nrPDB Length = 180 Score = 190 bits (482), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 89/174 (51%), Positives = 119/174 (68%), Gaps = 2/174 (1%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWDTAGQEDY Sbjct: 8 KCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 +RLRPLSY DV L+ FS+ S S ENI +KW PE+KH+ P +PI+LVG K DLR+D+ Sbjct: 68 NRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRDDKQ 127 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 ++ + +G ++ IGA Y+ECS+KT+ V+ VF+ A R AL+ Sbjct: 128 FLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179 >3BWD-D nrPDB Length = 182 Score = 187 bits (474), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 91/181 (50%), Positives = 124/181 (68%), Gaps = 3/181 (1%) Query: 1 MAAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWD Sbjct: 3 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 62 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPI+LVG K Sbjct: 63 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 122 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DLR+D+ + + P+ +G ++ IGA Y+ECS+K+++ V+ VF+ A R L Sbjct: 123 DLRDDK--QFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180 Query: 180 Q 180 Q Sbjct: 181 Q 181 >2NTY-C nrPDB Length = 180 Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 90/181 (49%), Positives = 123/181 (67%), Gaps = 3/181 (1%) Query: 1 MAAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWD Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VPIILVG K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DLR+D+ + + P+ +G ++ IG+ Y+ECS+KT+ V+ VF+ A + L Sbjct: 121 DLRDDK--QFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 Query: 180 Q 180 Q Sbjct: 179 Q 179 >2Q3H-A nrPDB Length = 201 Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 84/174 (48%), Positives = 119/174 (68%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GKT L++ ++ + +P Y+PT F+N+ A + VDG+ V L L DTAGQ+++ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEF 81 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 D+LRPL Y +TD+ L+CFS+ SP S +N+ EKW PE++ CP PIILVG + DLR D Sbjct: 82 DKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVK 141 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 EL K K++PV E + +A I A Y+ECSA T+ ++EVF+ A A +Q Sbjct: 142 VLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQ 195 >4U5X-A nrPDB Length = 178 Score = 181 bits (460), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 86/175 (49%), Positives = 116/175 (66%), Gaps = 4/175 (2%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG V L LWDTAG EDY Sbjct: 7 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLEDY 66 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 RLRPLSY DV ++ FS+ S S EN+ +KW PE++ F P VP++LVG K DLR D Sbjct: 67 SRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRED-- 124 Query: 127 TRRELAKMKQEP-VKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 R LA + E+G ++ IGA Y+ECS+KT+ ++ VF+ A + LQ Sbjct: 125 -RAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >3REG-A nrPDB Length = 194 Score = 170 bits (430), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 80/166 (48%), Positives = 109/166 (65%), Gaps = 10/166 (6%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+V+VGDGA GKTCLL+ FSK + P YVPTVFEN+ ++ ++ L LWDTAGQE+Y Sbjct: 25 KIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQEEY 84 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPLSY D+DV+L+CF++++ S +NI KW PE+KH+ +LVG K DLR D Sbjct: 85 DRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRKD-- 142 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + V +EG D+ ++G Y+E S+ K G+ EVFE Sbjct: 143 --------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFE 180 >2REX-B nrPDB Length = 197 Score = 170 bits (430), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 117/176 (66%), Gaps = 1/176 (0%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 R KLV+VGD CGKT +L V +KD +PE YVPTVFENY A +E + ++VEL+LWDT+G Sbjct: 10 RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSP 69 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 YD +RPL Y D+D +L+CF I P+++++ +KW E+ +CP+ ++L+G K DLR D Sbjct: 70 YYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTD 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKD-GVREVFEMATRAAL 179 T EL+ KQ P+ E+G +A ++GA Y+E SA T + + +F A+ L Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCL 185 >5HZH-A nrPDB Length = 332 Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/130 (59%), Positives = 92/130 (70%) Query: 50 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN 109 GK V L LWDTAG EDYDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN Sbjct: 200 GKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPN 259 Query: 110 VPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 169 PIILVG K DLR+D+ T +L + K P+ +G MA IGA Y+ECSA T+ G++ Sbjct: 260 TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKT 319 Query: 170 VFEMATRAAL 179 VF+ A RA L Sbjct: 320 VFDEAIRAVL 329 Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 2/57 (3%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELAL 57 M AI K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG + L Sbjct: 4 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGSGLATTL 58 >1Z0A-A nrPDB Length = 174 Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 14/166 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K +I+GD GK+CLL+ F+ +F V+ T+ + A I +DGKQ++L +WDTAGQE Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y L+ + I D+ ++ +H N+ I+L+GNK DL Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE--- 128 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 +RRE VK EEG A G +ME SAKT V E F Sbjct: 129 -SRRE--------VKKEEGEAFAREHGLI-FMETSAKTASNVEEAF 164 >4G01-B nrPDB Length = 181 Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 17/177 (9%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTA 61 +I KLV++GD GK+ L++ F KDQF E T+ + + + V+ V+ +WDTA Sbjct: 10 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 69 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 120 GQE Y L P+ Y ++ F + + S E +KW E++ PN+ + L GNK D Sbjct: 70 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSD 128 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF-EMATR 176 L + V E+ + A G F +ME SAKT V+E+F E+A R Sbjct: 129 L------------LDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARR 172 >2EW1-A nrPDB Length = 201 Score = 95.1 bits (235), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/180 (32%), Positives = 101/180 (56%), Gaps = 17/180 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K+V++G+ GKTCL+ F++ FP T+ ++ + +E++G++V+L +WDTAGQE Sbjct: 28 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 87 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRND 124 + + Y + +++ + I +S +PE W E++ + N V +LVGNK DL Sbjct: 88 FRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKIDL--- 143 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF-EMATRAALQARR 183 RRE+++ + E E +DM Y+E SAK D V ++F ++A R +AR+ Sbjct: 144 -AERREVSQQRAEEFS--EAQDMY-------YLETSAKESDNVEKLFLDLACRLISEARQ 193 >5SZH-B nrPDB Length = 203 Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 17/180 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRND 124 + + Y I++ + + +S N+ ++W E+ + NV +LVGNK DL Sbjct: 72 FRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKLLVGNKSDLTT- 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 ++ V ++ A+ +G ++E SAK V + F M A ++ R G Sbjct: 130 -----------KKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAF-MTMAAEIKKRMG 176 >2RHD-A nrPDB Length = 175 Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 90/168 (53%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + + Y+ T+ ++ + I ++ K V+L +WDTAGQE Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER 70 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 + + Y I++ + + DS +N+ + W E+ + NV +LVGNK DL Sbjct: 71 FRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAMENVNKLLVGNKCDL--- 126 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + + V +EGR++A+ G ++E SAK V + F Sbjct: 127 ---------VSKRVVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFH 164 >1YZU-A nrPDB Length = 170 Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K+V++G+G GKT L++ + +++F + ++ T+ +++ + + GK+V LA+WDTAGQE Sbjct: 8 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 67 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRND 124 + L P+ Y D++ ++ + I DS + + + W E++ N + + +VGNK DL + Sbjct: 68 FHALGPIYYRDSNGAILVYDITDEDSFQKV-KNWVKELRKMLGNEICLCIVGNKIDLEKE 126 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 H V +E A +GA Y SAK G+ E+F Sbjct: 127 RH------------VSIQEAESYAESVGAKHY-HTSAKQNKGIEELF 160 >3L0I-B nrPDB Length = 199 Score = 92.8 bits (229), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 17/180 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 35 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 94 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRND 124 + + Y I++ + + +S N+ ++W E+ + NV +LVGNK DL Sbjct: 95 FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTT- 152 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 ++ V ++ A+ +G ++E SAK V + F M A ++ R G Sbjct: 153 -----------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSF-MTMAAEIKKRMG 199 >2A5J-A nrPDB Length = 191 Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 14/166 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K +I+GD GK+CLL+ F+ +F V+ T+ + A + +DGKQ++L +WDTAGQE Sbjct: 23 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 82 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y L+ + I ++ ++ +H N+ I+L+GNK DL Sbjct: 83 FRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL---- 138 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 +RR+ VK EEG A G +ME SAKT V E F Sbjct: 139 ESRRD--------VKREEGEAFAREHGLI-FMETSAKTACNVEEAF 175 >6IF2-B nrPDB Length = 186 Score = 92.0 bits (227), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 96/178 (53%), Gaps = 15/178 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+I+GD GK+ LL+ F+ + F Y+ T+ ++ + +E++G++V+L +WDTAG E Sbjct: 16 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER 75 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y T +++ + + S +S N+ ++W E+ C +V ILVGNK ND+ Sbjct: 76 FRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNK----NDD 130 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 R+ V+ E+ A ++G E SAK V E+F T L+A++ Sbjct: 131 PERK--------VVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKK 179 >4LHX-A nrPDB Length = 186 Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 17/185 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 + + Y I++ + I + S +NI W + +H +V +++GNK D+ ND Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNI-RNWIRNIEEHASADVEKMILGNKCDV-ND 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 +R+++K + E + + G +ME SAK V F R ++A+ Sbjct: 130 ---KRQVSKERGEKLALDYG---------IKFMETSAKANINVENAFFTLAR-DIKAKMD 176 Query: 185 KKKSG 189 KK G Sbjct: 177 KKLEG 181 >5SZI-A nrPDB Length = 209 Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 17/185 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 + + Y I++ + I + S +NI W + +H +V +++GNK D+ ND Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNI-RNWIRNIEEHASADVEKMILGNKCDV-ND 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 +R+++K + E + + G +ME SAK V F R ++A+ Sbjct: 130 ---KRQVSKERGEKLALDYG---------IKFMETSAKANINVENAFFTLAR-DIKAKMD 176 Query: 185 KKKSG 189 KK G Sbjct: 177 KKLEG 181 >6O62-A nrPDB Length = 184 Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 15/171 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL++VGD GK+CLL+ F +D+F ++ T+ ++ + IE GK+++L +WDTAGQE Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQER 75 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y I++ + + S EN+ + +H + I LVGNK D DE Sbjct: 76 FRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCD---DE 132 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF-EMAT 175 R+ V E+G+++A ++ ++E SAK+ + V +F E+A+ Sbjct: 133 VNRQ---------VSKEQGQELAAKLNV-PFLEASAKSNENVDSIFYELAS 173 >3CPH-A nrPDB Length = 213 Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 15/166 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y I++ + + + NI + + +H ++LVGNK D Sbjct: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD----- 136 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 M+ V ++G +A +G ++E SAK D V E+F Sbjct: 137 --------METRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 >2OCY-C nrPDB Length = 170 Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 15/166 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y I++ + + + NI + + +H ++LVGNK D Sbjct: 65 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSD----- 119 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 M+ V ++G +A +G ++E SAK D V E+F Sbjct: 120 --------METRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 156 >4RKE-A nrPDB Length = 176 Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 14/166 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K +I+GD GK+CLL+ F+ +F V+ T+ + A I +DGKQ++L +WDTAG E Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLEA 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y L+ + I ++ ++ +H N+ I+L+GNK DL Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL---- 127 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 +RRE VK EEG A G +ME SA+T V E F Sbjct: 128 DSRRE--------VKKEEGEAFAREHGLV-FMETSARTAANVEEAF 164 >2WWX-A nrPDB Length = 175 Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 17/180 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRND 124 + + Y I++ + + +S N+ ++W E+ + NV +LVG K DL Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTT- 127 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 ++ V ++ A+ +G ++E SAK V + F M A ++ R G Sbjct: 128 -----------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSF-MTMAAEIKKRMG 174 >2G6B-A nrPDB Length = 180 Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 85/162 (52%), Gaps = 21/162 (12%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTV---FENYVADIEVDGKQVELALWDTAG 62 K+++VGD GKTCLL+ F F ++ TV F N V D VDG +V+L +WDTAG Sbjct: 12 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLD--VDGVKVKLQMWDTAG 69 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDL 121 QE + + Y D +L+ + + + S +NI + W E+ + + V ++L+GNK D Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVD- 127 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKT 163 H R VK E+G +A G +ME SAKT Sbjct: 128 --SAHER---------VVKREDGEKLAKEYG-LPFMETSAKT 157 >4QXA-A nrPDB Length = 208 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 20/179 (11%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 65 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAG E Sbjct: 10 KIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLER 69 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNKKD 120 + LR Y +D L+ FS+D S +N+ W E ++ + P +++GNK D Sbjct: 70 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKTD 128 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + K+ V EE + G + Y E SAK V FE A R L Sbjct: 129 I-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174 >2KE5-A nrPDB Length = 174 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 15/167 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F D+F E Y PT ++Y + +DG++V++ + DTAG EDY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R + + L+ FSI +S E + VK +P+++VGNK DL Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLE-- 122 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + +Q PV EE R A G Y+E SAKT+ V +VF Sbjct: 123 --------ERRQVPV--EEARSKAEEWGV-QYVETSAKTRANVDKVF 158 >1WMS-A nrPDB Length = 177 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 20/179 (11%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 65 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAGQE Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNKKD 120 + LR Y +D L+ FS+D S +N+ W E ++ + P +++GNK D Sbjct: 69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKID 127 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + + V EE + G + Y E SAK V FE A R L Sbjct: 128 I-------------SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 >2OCB-A nrPDB Length = 180 Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 20/179 (11%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG+ V L +WDTAGQE Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNKKD 120 + LR Y D L+ FS+D S EN+ W E ++ + P +++GNK D Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFVVLGNKVD 127 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + V EE + G + Y+E SAK V FE A R L Sbjct: 128 -------------KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 >5LPN-A nrPDB Length = 177 Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 + + Y I++ + I + S ENI KW + +H +V +L+GNK D+ + Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 130 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 +R + K K E + E G + E SAK + + F Sbjct: 131 ---KRVVPKGKGEQIAREHG---------IRFFETSAKANINIEKAF 165 >1X3S-A nrPDB Length = 195 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 18/178 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++I+G+ GK+ LL+ F+ D F PE+ + V I VDG + +LA+WDTAGQE Sbjct: 17 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 76 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII--LVGNKKDLRN 123 + L P Y +++ + + D+ + + W E++ +C I+ LVGNK D N Sbjct: 77 FRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN 135 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 E R E K R + ++E SAKT DGV+ FE +Q Sbjct: 136 REVDRNEGLKFA--------------RKHSMLFIEASAKTCDGVQCAFEELVEKIIQT 179 >3RAB-A nrPDB Length = 169 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++I+G+ + GKT L ++ D F +V TV ++ V I + K+++L +WDTAGQE Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 Y + Y ++ + I + +S N + W+ ++K + N ++LVGNK D+ + Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMED- 124 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + V E GR +A+ +G F + E SAK V++ FE Sbjct: 125 -----------ERVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFE 160 >5SZJ-A nrPDB Length = 202 Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 + + Y I++ + I + S ENI KW + +H +V +L+GNK D+ + Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 130 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 +R + K K E + E G + E SAK + + F Sbjct: 131 ---KRVVPKGKGEQIAREHG---------IRFFETSAKANINIEKAF 165 >3DZ8-A nrPDB Length = 191 Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 18/169 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+I+G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTAGQE Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQER 84 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 Y + Y ++ + I + +S N + W ++K + N +ILVGNK D Sbjct: 85 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCD---- 139 Query: 125 EHTRRELAKMKQEPVKP-EEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 M++E V P E+G+ +A ++G F + E SAK VR+ FE Sbjct: 140 ---------MEEERVVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFE 178 >2F9L-A nrPDB Length = 199 Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDTAGQE Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 66 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 Y R+ Y L+ + I + EN+ E+W E++ H N+ I+LVGNK DLR Sbjct: 67 YRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 123 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 H R V +E R A + ++E SA V E F+ Sbjct: 124 -HLR---------AVPTDEARAFAEK-NNLSFIETSALDSTNVEEAFK 160 >2GF9-A nrPDB Length = 189 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ + GKT L ++ D F +V TV ++ V + K+++L +WDTAGQE Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 Y + Y L+ + I + +S + + W ++K + N +ILVGNK DL + Sbjct: 84 YRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNKCDLED- 141 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + V E+GR +A+ +G F + E SAK V++VFE Sbjct: 142 -----------ERVVPAEDGRRLADDLG-FEFFEASAKENINVKQVFE 177 >4M8N-E nrPDB Length = 199 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 15/167 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV++G G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTAG E + Sbjct: 8 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQF 67 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R L + + +SI + + ++ + + VK +VP+ILVGNK DL + Sbjct: 68 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLED- 125 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V E+G+++A + ++E SAK+K V E+F Sbjct: 126 -----------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 161 >4FMC-F nrPDB Length = 117 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 69/116 (59%), Gaps = 3/116 (2%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDY 66 L+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDL 121 + Y I++ + + +S N+ + W E+ + NV +LVGNK DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDL 115 >1TU4-A nrPDB Length = 171 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQE Sbjct: 9 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 68 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 Y L P+ Y ++ + I + +S + W E+ + PN+ I L GNK DL N Sbjct: 69 YHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLAN- 126 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V +E + A+ + +ME SAKT V E+F Sbjct: 127 -----------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIF 161 >4RKF-A nrPDB Length = 190 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+I+G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTAG E Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLER 84 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 Y + Y ++ + + + DS ++ + W ++K + N +ILVGNK D+ + Sbjct: 85 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMED- 142 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 Q + E GR +A+++G + E SAK V+ VFE Sbjct: 143 -----------QRVISFERGRQLADQLGV-EFFETSAKENVNVKAVFE 178 >1ZC4-A nrPDB Length = 175 Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F D+F E Y PT ++Y + +DG++V++ + DTAG EDY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R + + L FSI +S + + VK NVP +LVGNK DL + Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLED- 125 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V EE ++ A + Y+E SAKT+ V +VF Sbjct: 126 -----------KRQVSVEEAKNRAEQWNV-NYVETSAKTRANVDKVF 160 >1ZBD-A nrPDB Length = 203 Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++I+G+ + GKT L ++ D F +V TV ++ V I + K+++L +WDTAG E Sbjct: 10 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLER 69 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 Y + Y ++ + I + +S N + W+ ++K + N ++LVGNK D+ + Sbjct: 70 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMED- 127 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + V E GR +A+ +G F + E SAK V++ FE Sbjct: 128 -----------ERVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFE 163 >1YZN-A nrPDB Length = 185 Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 7/154 (4%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 23 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 82 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRN- 123 + + Y + I++ + + +S + + W E+ + + + +LVGNK DL++ Sbjct: 83 FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKDK 141 Query: 124 ---DEHTRRELAKMKQEPVKPEEGRDMANRIGAF 154 + +E A + P D N AF Sbjct: 142 RVVEYDVAKEFADANKMPFLETSALDSTNVEDAF 175 >3CUE-F nrPDB Length = 206 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 7/154 (4%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 10 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 69 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRN- 123 + + Y + I++ + + +S + + W E+ + + + +LVGNK DL++ Sbjct: 70 FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKDK 128 Query: 124 ---DEHTRRELAKMKQEPVKPEEGRDMANRIGAF 154 + +E A + P D N AF Sbjct: 129 RVVEYDVAKEFADANKMPFLETSALDSTNVEDAF 162 >5FBL-B nrPDB Length = 221 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDTAGQE Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 77 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 Y + Y L+ + I + EN+ E+W E++ H N+ I+LVGNK DLR Sbjct: 78 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 134 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 H R V +E R A + G ++E SA V F+ Sbjct: 135 -HLR---------AVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQ 171 >4DXA-A nrPDB Length = 169 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 15/167 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV++G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTAG E + Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQF 66 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R L + + +SI + + ++ + + VK +VP+ILVGNK DL + Sbjct: 67 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLED- 124 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V E+G+++A + ++E SAK+K V E+F Sbjct: 125 -----------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 160 >2FFQ-A nrPDB Length = 171 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 16/176 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 KLV +G+ + GKT L+ F D F Y T+ ++++ + ++ + V L LWDTAGQE Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 63 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 + L P D+ V ++ + I + +S + KW +V+ +V I+LVGNK DL + Sbjct: 64 FRSLIPSYIRDSTVAVVVYDITNLNSFQQ-TSKWIDDVRTERGSDVIIMLVGNKTDLAD- 121 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 + + EEG A + ++E SAKT V+++F A L+ Sbjct: 122 -----------KRQITIEEGEQRAKELSVM-FIETSAKTGYNVKQLFRRVASALLE 165 >5UB8-A nrPDB Length = 222 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 24/190 (12%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F++D+F T+ E +E+DGK+V+ +WDTAGQE Sbjct: 17 KIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQER 76 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 Y + Y L+ + I +S E++ +W E+K H N+ I LVGNK DL Sbjct: 77 YRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDL--- 132 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGV--------REVFEMATR 176 +H R V EE ++ A + E SA + D V + ++EM ++ Sbjct: 133 DHLR---------AVPTEEAKNFAMENNLL-FTEASALSSDNVDLSFHQLLKNIYEMISK 182 Query: 177 AALQARRGKK 186 L+ K+ Sbjct: 183 HQLENNDSKQ 192 >1EK0-A nrPDB Length = 170 Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 13/167 (7%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ +++ F + F E PT+ ++ + ++ V+ +WDTAGQE Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 + L P+ Y + L+ + + P S W E+ + ++ I LVGNK D+ + Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIK-ARHWVKELHEQASKDIIIALVGNKIDMLQE 123 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 R+ V EEG +A G + E SAKT + V +VF Sbjct: 124 GGERK---------VAREEGEKLAEEKGLL-FFETSAKTGENVNDVF 160 >4KYI-B nrPDB Length = 170 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAG E Sbjct: 11 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLER 70 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 Y L P+ Y ++ + I + D+ + W E+ + PN+ I L GNK DL + Sbjct: 71 YHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLAS- 128 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V+ +E + A+ + +ME SAKT V E+F Sbjct: 129 -----------KRAVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIF 163 >4UJ4-A nrPDB Length = 185 Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDTAG E Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 Y + Y L+ + I + EN+ E+W E++ H N+ I+LVGNK DLR Sbjct: 72 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 128 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 H R V +E R A + G ++E SA V F+ Sbjct: 129 -HLR---------AVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQ 165 >2IL1-A nrPDB Length = 192 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 15/172 (8%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 A + +++I+G GKT L+ F+ D F E TV ++ + +E+ GK++ L +WDT Sbjct: 23 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDT 82 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKK 119 AGQE ++ + Y I++ + I ++ +++P KW + K+ + ++LVGNK Sbjct: 83 AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLVGNKL 141 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 D D R ++G A +I + E SAK V E+F Sbjct: 142 DCETDREITR------------QQGEKFAQQITGMRFCEASAKDNFNVDEIF 181 >5YOZ-A nrPDB Length = 177 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 15/173 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWD 59 M A K+V++G+ GK+ + + F++++F T+ +++ + +DG+ ++ +WD Sbjct: 11 MEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWD 70 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNK 118 TAG E + L P+ Y L+ + I + +SL+ + W E++ P++ I+LVGNK Sbjct: 71 TAGLERFRSLAPIYYRGASGALVVYDITNSESLKK-AQTWIKELRANADPSLIIVLVGNK 129 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 KD L ++Q V E+G+ +A + E SAK + V +VF Sbjct: 130 KD----------LGSLRQ--VSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVF 170 >5XR6-A nrPDB Length = 194 Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 KLV++GD GK+ LL F+K++F T+ E +V+GK V+ +WDTAGQE Sbjct: 27 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 86 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 Y + Y L+ + + + EN +W E++ H PN+ ++L+GNK DLR+ Sbjct: 87 YRAITSAYYRGAVGALLIYDVTRHATFEN-AARWLRELRGHTDPNIVVMLIGNKCDLRH- 144 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 VK EE + A R + +ME SA V F Sbjct: 145 -----------LVAVKTEEAKAFAERESLY-FMETSALDATNVENAF 179 >2HEI-A nrPDB Length = 179 Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQE Sbjct: 10 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 69 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 124 Y L P+ Y ++ + I + ++ + W E+ + P++ I L GNK DL N Sbjct: 70 YHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQRQASPSIVIALAGNKADLAN- 127 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V+ EE + A+ + +ME SAKT V ++F Sbjct: 128 -----------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLF 162 >4KU4-A nrPDB Length = 206 Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 34/200 (17%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 I K+ ++G+G GKT L + +K F E Y PT+ ++Y +DG L + DTAGQ Sbjct: 13 ITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTAGQ 72 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENI--------------------PEKWTPEV 103 E+Y LR ++ ++ F + S E P P+ Sbjct: 73 EEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPGDRHPDD 132 Query: 104 KHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKT 163 F P++ ++LVGNK DL TRRE+ + EG +A ++G G++E SAK Sbjct: 133 LPFAPSL-VVLVGNKCDL----DTRREVGTL--------EGSSLAKKLGC-GFVETSAKL 178 Query: 164 KDGVREVFEMATRAALQARR 183 V E F RA + +R Sbjct: 179 GTNVEEAFFSVVRADRRRKR 198 >5CM8-B nrPDB Length = 203 Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F D+F E Y PT ++Y + +DG++V++ + DTAGQEDY Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R + + L FSI +S + E + VK+ ++P +LVGNK DL + Sbjct: 75 AAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKN-DESIPFLLVGNKCDLNDK 133 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 +++ + A Y+E SAKT++ V +VF Sbjct: 134 RKVPLSECQLRAQQ-------------WAVPYVETSAKTRENVDKVF 167 >1Z22-A nrPDB Length = 168 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 15/175 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K+V+VG+GA GK+ ++ + K F + Y T+ +++ I+V+ + V L LWDTAGQE+ Sbjct: 7 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 66 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 +D + Y ++ FS +S E I W +V ++P LV NK DL +D Sbjct: 67 FDAITKAYYRGAQACVLVFSTTDRESFEAIS-SWREKVVAEVGDIPTALVQNKIDLLDD- 124 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 +K EE +A R+ + S K V EVF+ LQ Sbjct: 125 -----------SCIKNEEAEGLAKRL-KLRFYRTSVKEDLNVSEVFKYLAEKHLQ 167 >2HUP-A nrPDB Length = 201 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 15/167 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KLV+VGD + GKTC++ F F E T+ ++ + +E+ GK+V+L +WDTAGQE Sbjct: 31 KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 90 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 + + Y + ++ + I S ++P W +V+ + N+ +L+GNK D Sbjct: 91 FRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSD---- 145 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 L+++++ V E + +A +E SAK V E F Sbjct: 146 ------LSELRE--VSLAEAQSLAEHYDILCAIETSAKDSSNVEEAF 184 >1Z0F-A nrPDB Length = 179 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 16/176 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K +I+GD GK+CLL F++ +F T+ E IEV G++++L +WDTAGQE Sbjct: 17 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 76 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 + + Y LM + I + S N W + ++ PN IIL+GNK DL Sbjct: 77 FRAVTRSYYRGAAGALMVYDI-TRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE-- 133 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 Q V EE + A G ++E SAKT + V + F A + Q Sbjct: 134 ----------AQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKIYQ 178 >2GIL-A nrPDB Length = 162 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 KLV +G+ + GKT L+ F D F Y T+ ++++ + ++ + V L LWDTAGQE Sbjct: 3 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 62 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 + L P D+ V ++ + I + +S + KW +V+ +V I+LVGNK DL + Sbjct: 63 FRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIMLVGNKTDLAD- 120 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V EEG A + ++E SAK V+++F Sbjct: 121 -----------KRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLF 155 >2P5S-A nrPDB Length = 199 Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 12/162 (7%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K+V+ GD A GK+ L+ K++F E T+ ++ + + VDG++ L LWDTAGQE Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQER 89 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 + + + D +L+ + + S NI E W ++ VPI+LVGNK D+R+ Sbjct: 90 FRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADIRDT 148 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDG 166 T Q+ V G +A GA + C KDG Sbjct: 149 AATE------GQKCVPGHFGEKLAMTYGA---LFCETSAKDG 181 >2ERX-A nrPDB Length = 172 Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 15/168 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++ + G G GK+ L++ F K F E Y+PTV + Y I D L + DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 64 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTP--EVKHFCPNVPIILVGNKKDLRND 124 ++ LS ++ +SI S SLE + + E+K ++PI+LVGNK D Sbjct: 65 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNK----CD 120 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 E RE V+ E +A R +ME SAK V+E+F+ Sbjct: 121 ESPSRE--------VQSSEAEALA-RTWKCAFMETSAKLNHNVKELFQ 159 >3T5G-A nrPDB Length = 181 Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 24/192 (12%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +K+ I+G + GK+ L I F + QF + Y PT+ + I V+G++ L L DTAGQ++ Sbjct: 7 RKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDE 66 Query: 66 YDRLRPLSYP-DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRN 123 Y + P +Y D + ++ +S+ S S E I + +PI+LVGNKKDL Sbjct: 67 YS-IFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDL-- 123 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 H R + EEG+ +A A ++E SAK +VF R L+A + Sbjct: 124 --HMER--------VISYEEGKALAESWNA-AFLESSAKENQTAVDVFR---RIILEAEK 169 Query: 184 -----GKKKSGC 190 + KS C Sbjct: 170 MDGACSQGKSSC 181 >5LDD-C nrPDB Length = 207 Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 18/189 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K++I+GD GKT L+ + +F Y T+ +++ ++ VD +QV + LWDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKD 120 + L Y D ++ F +++ S + + + W E + P N P +++G K D Sbjct: 72 FQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGIKID 130 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 + E ++R + + + G Y E SAK V E F++ R AL Sbjct: 131 V---EESKR--------VISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALM 179 Query: 181 ARRGKKKSG 189 ++ SG Sbjct: 180 QEESEEFSG 188 >2FG5-A nrPDB Length = 192 Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 17/178 (9%) Query: 2 AAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE-LALWD 59 +AIR+ K+ ++GD GK+ ++ F +D F PT+ +++ G ++ +WD Sbjct: 19 SAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWD 78 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNK 118 TAGQE + L P+ Y + ++ + I DS + +KW E+K P N+ + + GNK Sbjct: 79 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNK 137 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 DL + +++ P+K + ++ A IGA +E SAK + E+F+ +R Sbjct: 138 CDLSD----------IREVPLK--DAKEYAESIGAI-VVETSAKNAINIEELFQGISR 182 >5LEF-A nrPDB Length = 191 Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 KLV +G+ + GKT L+ F D F Y T+ ++++ + ++ + V L LWDTAG E Sbjct: 11 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLER 70 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 + L P D+ V ++ + I + +S + KW +V+ +V I+LVGNK DL + Sbjct: 71 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTDLAD- 128 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + V EEG A + ++E SAK V+++F Sbjct: 129 -----------KRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLF 163 >4PHF-A nrPDB Length = 184 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 19/185 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQV-ELALWDTAGQE 64 K++I+GD GKT L+ + D++ Y T+ +++ ++ VDG +V + +WDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 71 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCPN----VPIILVGNKK 119 + L Y D ++ + + + S ENI + W E + H N P +++GNK Sbjct: 72 RFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPETFPFVILGNKI 130 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 D A+ ++ V + +++A +G SAK V FE R+AL Sbjct: 131 D-----------AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 179 Query: 180 QARRG 184 Q + Sbjct: 180 QQNQA 184 >2BMD-A nrPDB Length = 186 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 18/177 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQED 65 K +++G+ GK+CLL F + +F + T+ + + I V GK V+L +WDTAGQE Sbjct: 12 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRND 124 + + Y L+ + I S ++ N W + + N+ IIL GNKKDL D Sbjct: 72 FRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDAD 130 Query: 125 -EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 E T E ++ QE ++E SA T + V E F R L Sbjct: 131 REVTFLEASRFAQEN--------------ELMFLETSALTGENVEEAFVQCARKILN 173 >3BFK-A nrPDB Length = 181 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 4/120 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEV-DGKQVELALWDTAGQE 64 K+V++GD GK+ LL F++D+F T+ E I++ + K ++ +WDTAGQE Sbjct: 9 KIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 Y + Y L+ + I +S ENI EKW E++ N+ I+LVGNK DL++ Sbjct: 69 RYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLKH 127 >1Z06-A nrPDB Length = 189 Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 5/131 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K++++GD GKTCL F +FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 22 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 81 Query: 66 YDR-LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPN-VPIILVGNKKDLR 122 + + + Y + ++ + + + S ++P W E K H N +P ILVGNK DLR Sbjct: 82 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP-AWIEECKQHLLANDIPRILVGNKCDLR 140 Query: 123 NDEHTRRELAK 133 + +LA+ Sbjct: 141 SAIQVPTDLAQ 151 >2N1B-A nrPDB Length = 261 Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + +F + YV T+ E + + ++ +WDTAG Sbjct: 50 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 109 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QE + LR Y ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 110 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIK 168 Query: 123 N 123 + Sbjct: 169 D 169 >2G77-B nrPDB Length = 198 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 5/131 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K++++GD GKTCL F +FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 31 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 90 Query: 66 YDR-LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPN-VPIILVGNKKDLR 122 + + + Y + ++ + + + S ++P W E K H N +P ILVGNK DLR Sbjct: 91 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP-AWIEECKQHLLANDIPRILVGNKCDLR 149 Query: 123 NDEHTRRELAK 133 + +LA+ Sbjct: 150 SAIQVPTDLAQ 160 >2O52-A nrPDB Length = 200 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 16/176 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQED 65 K +++G GK+CLL F +++F + T+ + + + V GK V+L +WDTAGQE Sbjct: 27 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 86 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND- 124 + + Y L+ + I S ++ ++ T PN+ +IL GNKKDL + Sbjct: 87 FRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPER 146 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 E T E ++ QE ++E SA T + V E F R L Sbjct: 147 EVTFLEASRFAQE--------------NELMFLETSALTGENVEEAFLKCARTILN 188 >5WDQ-A nrPDB Length = 170 Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L F+I++ S E+I ++ ++K +VP++LVGNK D Sbjct: 80 EGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKCD-------------AA 125 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 V+ + +D+A G Y+E SAKT+ GV + F R Q Sbjct: 126 ARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVREIRQ 169 >2F7S-A nrPDB Length = 217 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 27/179 (15%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ-----------VEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ V Q V L Sbjct: 27 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 86 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 113 LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 87 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 145 Query: 114 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 146 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVE 191 >5UWI-A nrPDB Length = 237 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + +F + YV T+ E + + ++ +WDTAG Sbjct: 30 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 89 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QE + LR Y ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 90 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIK 148 Query: 123 N 123 + Sbjct: 149 D 149 >5CLL-A nrPDB Length = 191 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 2/121 (1%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + +F + YV T+ E + + ++ +WDTAG Sbjct: 9 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 68 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QE + LR Y ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIK 127 Query: 123 N 123 + Sbjct: 128 D 128 >4KLZ-A nrPDB Length = 173 Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 19/184 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV++G G GK+ + + F +FPE + PT+ + Y I +D + L + DTAGQ ++ Sbjct: 7 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEF 66 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R + ++C+SI S + E + V+ + P++LVGNK DL+ Sbjct: 67 TAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRR-TDDTPVVLVGNKSDLK-- 123 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 +++Q V EEG +A + E SA + + +VF R + RR Sbjct: 124 --------QLRQ--VTKEEGLALAREFSC-PFFETSAAYRYYIDDVFHALVR---EIRRK 169 Query: 185 KKKS 188 +K++ Sbjct: 170 EKEA 173 >3CPJ-B nrPDB Length = 223 Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F+K++F T+ E +E++GK+++ +WDTAGQE Sbjct: 15 KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQER 74 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 Y + Y L+ + I S EN W E++ NV + L+GNK DL Sbjct: 75 YRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNKSDL--- 130 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 H R V EE + A + E SA + V + FE Sbjct: 131 AHLR---------AVPTEESKTFAQE-NQLLFTETSALNSENVDKAFE 168 >5XOJ-A nrPDB Length = 182 Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 KLV+VGDG GKT + +F + Y+ T+ E + + +++ +WDTAG E Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLEK 73 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 + LR Y + ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 74 FGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVK 129 >2IEY-A nrPDB Length = 195 Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-----VADIE-VDGK-----QVEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ V D + DG +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 113 LWDTAG E + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 131 Query: 114 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 L+GNK DL + Q V + R++A + G Y E SA T V + E Sbjct: 132 LIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 >1D5C-A nrPDB Length = 162 Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 16/170 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQ 63 + KLV +G+ A GKT ++ F D F Y T+ ++++ + +D V L LWDTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLR 122 E + L P D+ ++ + I + S EN KW ++ +V I LVGNK DL Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTT-KWIQDILNERGKDVIIALVGNKTDLG 119 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + V EEG A + E SAK ++ +F+ Sbjct: 120 D------------LRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFK 156 >2IEZ-A nrPDB Length = 220 Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 27/179 (15%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-----VADIE-VDGK-----QVEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ V D + DG +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 113 LWDTAG E + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 131 Query: 114 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 L+GNK DL + Q V + R++A + G Y E SA T V + E Sbjct: 132 LIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 >3WYF-A nrPDB Length = 219 Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 KLV+VGDG GKT + +F + Y+ T+ E + + +++ +WDTAG E Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLEK 73 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 + LR Y + ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 74 FGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVK 129 >3BC1-A nrPDB Length = 195 Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 27/180 (15%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV-----------DGKQVEL 55 K + +GD GKT +L ++ +F ++ TV ++ V G+++ L Sbjct: 13 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH--FCPNVPII 113 LWDTAG E + L + D L+ F + + S N+ W +++ + N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYSENPDIV 131 Query: 114 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 173 L GNK DL + Q VK EE R++A + G Y E SA + EM Sbjct: 132 LCGNKSDLED------------QRAVKEEEARELAEKYG-IPYFETSAANGTNISHAIEM 178 >3RWM-B nrPDB Length = 185 Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 16/176 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F+ D+F T+ E IEV+ K+++ +WDTAG E Sbjct: 12 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 124 Y + Y L+ + I S EN W E++ NV + L+GNK D Sbjct: 72 YRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLTELRENADDNVAVGLIGNKSD---- 126 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 LA ++ P + M N++ + E SA D V + F A Q Sbjct: 127 ------LAHLRAVPTDEAKNFAMENQM---LFTETSALNSDNVDKAFRELIVAIFQ 173 >2GF0-A nrPDB Length = 199 Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 20/178 (11%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L++ F K F + Y+PT+ + Y I D L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 78 DVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 ++ FS+ S SLE + K ++K ++P++LVGNK D E RE + Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQAVA 140 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE----MATRAALQARRGKKKSG 189 QE +ME SAK V+E+F+ + TR + K+SG Sbjct: 141 QE--------------WKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSG 184 >6HUF-A nrPDB Length = 182 Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 17/170 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 65 K + +GD GKT +L ++ +F ++ TV ++ I + K+++L LWDTAG E Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLER 70 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH--FCPNVPIILVGNKKDLRN 123 + L + D L+ F + + +S N+ W ++K + N I+L GNK DL + Sbjct: 71 FRSLTTAFFRDAMGFLLLFDLTNEESFLNV-RNWISQLKTHAYSENPDIVLCGNKSDLED 129 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 173 + V E R +A G Y E SA + + EM Sbjct: 130 ------------ERVVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEM 166 >4WA7-A nrPDB Length = 170 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 20/172 (11%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L F+I++ S E+I + ++K +VP++LVGNK DL + Sbjct: 77 EGFLCVFAINNTKSFEDI-HHYREQIKRVKDSEDVPMVLVGNKCDLPS------------ 123 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKKK 187 V ++ +D+A G ++E SAKT+ GV + F R + R+ K+K Sbjct: 124 -RTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVR---EIRKHKEK 170 >3CON-A nrPDB Length = 190 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 17/170 (10%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L F+I++ S +I + ++K +VP++LVGNK DL TR Sbjct: 94 EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL----PTR------- 141 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGK 185 V ++ ++A G ++E SAKT+ GV + F R Q R K Sbjct: 142 --TVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQYRMKK 188 >3OES-A nrPDB Length = 201 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 16/168 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +K+VI+G GKT L F + +F E Y PTV Y + + + L L DTAGQ++ Sbjct: 25 RKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDE 84 Query: 66 YDRLRPLSY-PDTDVILMCFSIDSPDSLENIPEKWTP-EVKHFCPNVPIILVGNKKDLRN 123 Y L P S+ ++ +S+ S S + I + H VP++LVGNK DL Sbjct: 85 YSIL-PYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSP 143 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 + RE V+ EG+ +A GA +ME SA+ + +F Sbjct: 144 E----RE--------VQAVEGKKLAESWGA-TFMESSARENQLTQGIF 178 >2ERY-A nrPDB Length = 172 Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 16/161 (9%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y +D + L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 78 DVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L+ FS+ S E I ++ VK P+IL+GNK DL +H R+ Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKD-RDEFPMILIGNKADL---DHQRQ------ 127 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 V EEG+ +A ++ YME SAK + V + F R Sbjct: 128 ---VTQEEGQQLARQLKV-TYMEASAKIRMNVDQAFHELVR 164 >5WDR-A nrPDB Length = 171 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 64/178 (35%), Positives = 87/178 (48%), Gaps = 16/178 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MA +LV+VG G GK+ L I + F Y PT+ ++Y + +D + L + DT Sbjct: 3 MAMTEYRLVVVGTGGVGKSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDT 62 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNK 118 AGQEDY +R + L +SIDS SL+ I + VK VP+ILVGNK Sbjct: 63 AGQEDYSAMRDQYMRTGEGFLCVYSIDSQQSLDEIHSFREQILRVKD-QDEVPMILVGNK 121 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 DL +EH RE V E G+ +A + +ME SAK + V E F R Sbjct: 122 CDL--EEH--RE--------VSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVR 166 >6IYB-A nrPDB Length = 199 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K++I+GD GKT L+ + +F Y T+ +++ ++ VD + V + +WDTAG E Sbjct: 15 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLER 74 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKD 120 + Y D ++ F + +P++ + + + W E + P N P +++GNK D Sbjct: 75 FQSGVAF-YRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 132 Query: 121 LRNDE-HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 L N + T+R A + P Y E SAK V + F+ R AL Sbjct: 133 LENRQVATKRAQAWCYSKNNIP--------------YFETSAKEAINVEQAFQTIARNAL 178 Query: 180 Q 180 + Sbjct: 179 K 179 >5UHV-A nrPDB Length = 166 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L F+I++ S +I + ++K +VP++LVGNK DL TR Sbjct: 76 EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL----PTR------- 123 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 V ++ ++A G ++E SAKT+ GV + F R Q Sbjct: 124 --TVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 165 >3CBQ-A nrPDB Length = 195 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 19/186 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN-YVADIEVDGKQVELALWDTAGQED 65 K+++VG+ GK+ L F Q + P E+ Y I VD ++V L ++D Q D Sbjct: 25 KVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQGD 84 Query: 66 YDR-LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN--VPIILVGNKKDLR 122 LR D L+ FS+ S +PE ++ P+ +P+ILVGNK DL Sbjct: 85 AGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLL-RLRAGRPHHDLPVILVGNKSDL- 142 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 + V EEGR +A + + ++E SA RE+FE A R ++ R Sbjct: 143 -----------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVR-QIRLR 189 Query: 183 RGKKKS 188 RG+ + Sbjct: 190 RGRNHA 195 >2ATV-A nrPDB Length = 196 Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 18/168 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED- 65 KL I G GK+ L++ F +F Y PT+ Y +D + V + + DTAGQED Sbjct: 30 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDT 89 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENI-PEKWTPEVKHFCPNVPIILVGNKKDLRND 124 R + + + V++ + I S E + P K + NV +ILVGNK DL Sbjct: 90 IQREGHMRWGEGFVLV--YDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADL--- 144 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDG-VREVF 171 +H+R+ V EEG +A + A + ECSA T +G + E+F Sbjct: 145 DHSRQ---------VSTEEGEKLATEL-ACAFYECSACTGEGNITEIF 182 >1YVD-A nrPDB Length = 169 Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 16/167 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K+ ++GD GK+ ++ F +D F PT+ +++ ++ + + +WDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 + L P+ Y + ++ + I ++ + + W E++ H P++ + + GNK DL + Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTL-KNWVRELRQHGPPSIVVAIAGNKCDLTD- 124 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 RE V + +D A+ I A ++E SAK + E+F Sbjct: 125 ---VRE--------VMERDAKDYADSIHAI-FVETSAKNAININELF 159 >2FN4-A nrPDB Length = 181 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 20/164 (12%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y VDG L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDEHTRRELAKMKQ 136 L+ F+I+ S + + +T ++ + P++LVGNK DL + +Q Sbjct: 82 HGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLES----------QRQ 131 Query: 137 EPVKPEEGRDMANRIGA---FGYMECSAKTKDGVREVFEMATRA 177 P R A+ GA Y E SAK + V E FE RA Sbjct: 132 VP------RSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRA 169 >3E5H-A nrPDB Length = 178 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 20/172 (11%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGK-QVELALWDTAGQE 64 K+V++GDGA GKT L F+++ F + Y T+ + ++ I + G V L +WD GQ Sbjct: 8 KIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQT 67 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF---CPNVPII-LVGNKKD 120 ++ +L+ + I + S EN+ E W VK P++ LVGNK D Sbjct: 68 IGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVALVGNKID 126 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 L EH R +KPE+ G F SAKT D V F+ Sbjct: 127 L---EHMR---------TIKPEKHLRFCQENG-FSSHFVSAKTGDSVFLCFQ 165 >3RAP-R nrPDB Length = 167 Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 16/161 (9%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L + F F E Y PT+ + Y +IEVD L + DTAG E + +R L + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 78 DVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 ++ +S+ + S ++I VK + VP+ILVGNK DL ++ Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREV-------- 126 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 EGR +A G +ME SAK+K V E+F R Sbjct: 127 ----SSSEGRALAEEWGC-PFMETSAKSKTMVDELFAEIVR 162 >3TSO-A nrPDB Length = 178 Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 16/168 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++G+ GKT LL F++++F T+ E + + V+ +WDTAG E Sbjct: 12 KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 71 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 124 Y + Y L+ F + + + E+W E+ H + ++LVGNK DL Sbjct: 72 YRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHAEATIVVMLVGNKSDLS-- 128 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + V EE R A G ++E SA V FE Sbjct: 129 ----------QAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFE 165 >3Q85-A nrPDB Length = 169 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 18/174 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+++VG+ GK+ L F Q + + + Y I VD ++V L ++D Q D Sbjct: 4 KVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQGD 63 Query: 66 YDR-LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN--VPIILVGNKKDLR 122 L+ D L+ FS+ S +PE ++ P+ +P+ILVGNK DL Sbjct: 64 AGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLL-RLRAGRPHHDLPVILVGNKSDL- 121 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 + V EEGR +A + + ++E SA RE+FE A R Sbjct: 122 -----------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVR 163 >4DJT-A nrPDB Length = 218 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 17/160 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV--FENYVADIEVDGKQVELALWDTAGQE 64 K+ ++GDG GKT + +F + Y TV + V ++ G ++ +WDTAGQE Sbjct: 13 KICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQE 72 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRN 123 L+ + Y ++ F + S + +N+ +W E + N PI++ NK D++N Sbjct: 73 KKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKIDIKN 131 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKT 163 + ++L E +K G++ + Y E SAKT Sbjct: 132 RQKISKKLV---MEVLK---GKN-------YEYFEISAKT 158 >3PIR-A nrPDB Length = 183 Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 16/147 (10%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y+ E+D + L + DTAGQE++ +R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 78 DVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 D L+ +S+ S E++ + VK + P+ILV NK DL H R+ Sbjct: 91 DGFLIVYSVTDKASFEHVDRFHQLILRVKD-RESFPMILVANKVDLM---HLRK------ 140 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAK 162 V ++G++MA + Y+E SAK Sbjct: 141 ---VTRDQGKEMATKYN-IPYIETSAK 163 >3CLV-A nrPDB Length = 208 Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 80/205 (39%), Gaps = 54/205 (26%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FENYVADIEVDGK------------ 51 K V++G+ + GK+ +++ +KD F E T+ F YV ++ Sbjct: 9 KTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNNI 68 Query: 52 -----------------------QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS 88 ++ +WDTAGQE Y + PL Y ++ F I + Sbjct: 69 NSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDISN 128 Query: 89 PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMA 148 ++L+ + W ++K N IILV NK D + E+ K Q+ Sbjct: 129 SNTLDR-AKTWVNQLK-ISSNYIIILVANKIDKNKFQVDILEVQKYAQD----------- 175 Query: 149 NRIGAFGYMECSAKTKDGVREVFEM 173 +++ SAKT ++ +F M Sbjct: 176 ---NNLLFIQTSAKTGTNIKNIFYM 197 >5C1S-A nrPDB Length = 391 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 8/133 (6%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +L++VG GKT L D F E + E +++D + +++ D AGQ+ + Sbjct: 64 RLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIAGQQSF 118 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRNDE 125 Y D IL+ + I S ++ W P++ +C + II++GNKKD D Sbjct: 119 YACDN-PYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKDQEIDR 177 Query: 126 -HTRRELAKMKQE 137 TR+E + Q+ Sbjct: 178 IITRKEAEQFAQD 190 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 18/160 (11%) Query: 4 IRKKLVIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 I+ ++++VGD GKT + F+ +D ++ + + E++ + E+ + D Sbjct: 221 IKIRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRF----EMEKIKYEIIMIDWGF 276 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 + P + IL+ + I + +S +NI K+ P + + +V ++VG K DL Sbjct: 277 YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDLE 336 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAK 162 Q + + +A+ +G + Y+E S+K Sbjct: 337 ------------AQRKITMGDALTLADWLG-YKYVEMSSK 363 >2NZJ-A nrPDB Length = 175 Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 16/169 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++V++GD GKT L +F+ Q +++ + Y + VDG+ L + DT E Sbjct: 6 RVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEAEKL 65 Query: 67 DR--LRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGNKKDLRN 123 D+ + ++ +SI S E+ E + H +VPIILVGNK D Sbjct: 66 DKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD--- 122 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 LA+ ++ V EEGR A + ++E SA + V E+FE Sbjct: 123 -------LARCRE--VSVEEGRACAV-VFDCKFIETSATLQHNVAELFE 161 >5XC3-A nrPDB Length = 176 Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD--IEVDGKQVELALWDTAGQE 64 K++++G GK+ ++ F ++ PT+ + + I +GK ++L +WDTAGQE Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQE 66 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIIL-VGNKKDL 121 + + + Y ++ L+ F + +S +++ W +++ C IL V NK D+ Sbjct: 67 RFRSITKMYYTNSLGCLVVFDVTDRESFDDVYY-WINDLRINCHTTYYILVVANKIDI 123 >2CJW-A nrPDB Length = 192 Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 27/191 (14%) Query: 7 KLVIVGDGACGKTCLLIVF-----SKDQFPEVYVPTVFENYVADIEVDGKQ---VELALW 58 ++V++G+ GK+ L +F S D EV +E + VDG+ + L +W Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLM---VDGESATIILLDMW 64 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGN 117 + G+ ++ L D L+ +SI S E E + ++PIILVGN Sbjct: 65 ENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 122 Query: 118 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 K DL ++ V EGR A + ++E SA + V+E+FE R Sbjct: 123 KSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELFEGIVRQ 169 Query: 178 ALQARRGKKKS 188 R K+K+ Sbjct: 170 VRLRRDSKEKN 180 >4CZ2-A nrPDB Length = 230 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 20/170 (11%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 64 K++++G+ GKT ++ + F + Y T+ ++ + D + V L LWD AG E Sbjct: 32 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 91 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV--KHFCPN---VPIILVGNKK 119 + + + Y + + F I + E + KW ++ K PN +P +L+ NK Sbjct: 92 RFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 150 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 169 D + K + P + G G+ E SAK + E Sbjct: 151 D------------QNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEE 188 >6FF8-A nrPDB Length = 181 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 20/170 (11%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 64 K++++G+ GKT ++ + F + Y T+ ++ + D + V L LWD AG E Sbjct: 10 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 69 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV--KHFCPN---VPIILVGNKK 119 + + + Y + + F I + E + KW ++ K PN +P +L+ NK Sbjct: 70 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 128 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 169 D D Q P + ++ G G+ E SAK + E Sbjct: 129 DQNKDS---------SQSPSQVDQ---FCKEHGFAGWFETSAKDNINIEE 166 >2G3Y-A nrPDB Length = 211 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 27/191 (14%) Query: 7 KLVIVGDGACGKTCLLIVF-----SKDQFPEVYVPTVFENYVADIEVDGKQ---VELALW 58 ++V++G+ GK+ L +F S D EV +E + VDG+ + L +W Sbjct: 39 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLM---VDGESATIILLDMW 95 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGN 117 + G+ ++ L D L+ +SI S E E + ++PIILVGN Sbjct: 96 ENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 153 Query: 118 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 K DL ++ V EGR A + ++E SA + V+E+FE R Sbjct: 154 KSDL------------VRCREVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFEGIVRQ 200 Query: 178 ALQARRGKKKS 188 R K+K+ Sbjct: 201 VRLRRDSKEKN 211 >2AL7-A nrPDB Length = 186 Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 20/146 (13%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +L +VG GKT + V + QF E +PTV N +V V + +WD GQ + Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR---KVTKGNVTIKIWDIGGQPRF 80 Query: 67 DRLRPLSYPDTDVILMCFSIDSPD---------SLENIPEKWTPEVKHFCPNVPIILVGN 117 + + I+ + ID+ D L N+ +K P+++ +P++++GN Sbjct: 81 RSMWERYCRGVNAIV--YMIDAADREKIEASRNELHNLLDK--PQLQ----GIPVLVLGN 132 Query: 118 KKDLRNDEHTRRELAKMKQEPVKPEE 143 K+DL N ++ + KM ++ E Sbjct: 133 KRDLPNALDEKQLIEKMNLSAIQDRE 158 >3C5C-A nrPDB Length = 187 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 20/177 (11%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 L I+G GK+ L + F +F Y P + + Y ++ VD + V L + DTA D Sbjct: 23 NLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA---DL 79 Query: 67 DRLRPLS-YPD-TDVILMCFSIDSPDSLENIP---EKWTPEVKHFCPNVPIILVGNKKDL 121 D R Y + L+ +S+DS S ++ E K ++P +L+GNK D Sbjct: 80 DTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLD- 138 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 +A+ +Q V EG +A R G + + + V+ VF A R A Sbjct: 139 ---------MAQYRQ--VTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREA 184 >3D6T-B nrPDB Length = 171 Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 6/137 (4%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VAD--IEVDGKQ---VELALWDT 60 KL+IVG+ GKT LL K + ++ + + V D I++ K+ + L +WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AG+E++ P + L + + + + + W +K + P+ILVG D Sbjct: 62 AGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLD 121 Query: 121 LRNDEHTRRELAKMKQE 137 + +++ + ++K+ +E Sbjct: 122 VSDEKQRKACMSKITKE 138 >2LKD-A nrPDB Length = 178 Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 20/170 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + I+G GKT LL + E + + ++ +V ++ DT G E + Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQ-HIGAYQVTVNDKKITFLDTPGHEAFT 69 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R TD++++ + D P ++E I NVPII+ NK D + + Sbjct: 70 TMRARGAQVTDIVILVVAADDGVMPQTVEAINHAK-------AANVPIIVAINKMD-KPE 121 Query: 125 EHTRRELAKMKQEPVKPEE-GRDMANRIGAFGYMECSAKTKDGVREVFEM 173 + R + ++ + + PEE G D + + SAKTK+G+ + EM Sbjct: 122 ANPDRVMQELMEYNLVPEEWGGDTI-------FCKLSAKTKEGLDHLLEM 164 >3Q72-A nrPDB Length = 166 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 17/172 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSK-DQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++++G GK+ L +F + PE Y I VDG++ L ++D Q+ Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDGPEA--EAAGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGNKKDLRND 124 L D ++ +S+ S E E + +VPIILVGNK DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL--- 118 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 ++ V +EGR A + ++E SA V+ +FE R Sbjct: 119 ---------VRSREVSVDEGRACAV-VFDCKFIETSAALHHNVQALFEGVVR 160 >4ILE-A nrPDB Length = 184 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 20/146 (13%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +L +VG GKT + V + QF E +PTV N ++ V + LWD GQ + Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR---KITKGNVTIKLWDIGGQPRF 80 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDS---------LENIPEKWTPEVKHFCPNVPIILVGN 117 + I+ + +D+ D L N+ +K P+++ +P++++GN Sbjct: 81 RSMWERYCRGVSAIV--YMVDAADQEKIEASKNELHNLLDK--PQLQ----GIPVLVLGN 132 Query: 118 KKDLRNDEHTRRELAKMKQEPVKPEE 143 K+DL + + KM ++ E Sbjct: 133 KRDLPGALDEKELIEKMNLSAIQDRE 158 >2YC4-C nrPDB Length = 208 Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSK--DQFPEVYVPTV-FENYVADIEVDGK--QVELA 56 A +R K+ +VG+ GK+ L+ +F+ +F + Y T E VA + + VEL Sbjct: 17 ATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELF 76 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN----VPI 112 L DTAG + Y + ++ F + S +S E+ + W +K P+ + Sbjct: 77 LLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRA 135 Query: 113 ILVGNKKDLRNDEHTRR 129 +LV NK DL H R Sbjct: 136 VLVANKTDLPPQRHQVR 152 >3LRP-A nrPDB Length = 181 Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 15/123 (12%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L K + EV +PT+ N V+ + + +WD GQ Sbjct: 19 RILMVGLDAAGKTTILY---KVKLGEVVTTIPTIGFNVET---VEFRNISFTVWDVGGQ- 71 Query: 65 DYDRLRPL---SYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV-GNKKD 120 D++RPL Y +TD ++ + + +++ E+ + IILV NK+D Sbjct: 72 --DKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQD 129 Query: 121 LRN 123 L N Sbjct: 130 LPN 132 >2H16-A nrPDB Length = 183 Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 6/85 (7%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++IVG GKT +L FS ++ PT+ N V +I ++ + +WD GQE Sbjct: 23 HKVIIVGLDNAGKTTILYQFSMNEVVHTS-PTIGSN-VEEIVINNTR--FLMWDIGGQES 78 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPD 90 Y +T+ +++ +DS D Sbjct: 79 LRSSWNTYYTNTEFVIVV--VDSTD 101 >4YLG-A nrPDB Length = 173 Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 17/122 (13%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ Sbjct: 15 RILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ--- 67 Query: 67 DRLRPL---SYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF----CPNVPIILVGNKK 119 D++RPL Y +T I+ F +DS D + I E +K N +++ NK Sbjct: 68 DKIRPLWRHYYQNTQAII--FVVDSNDR-DRIGEAREELMKMLNEDEMRNAILLVFANKH 124 Query: 120 DL 121 DL Sbjct: 125 DL 126 >1YZG-A nrPDB Length = 179 Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++IVG GKT +L F ++ PT+ N V +I V K +WD GQE Sbjct: 17 HKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSN-VEEIVV--KNTHFLMWDIGGQES 72 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPD 90 Y +T+ I++ +DS D Sbjct: 73 LRSSWNTYYSNTEFIILV--VDSID 95 >2GAO-A nrPDB Length = 208 Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 10/128 (7%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV +G GKT LL + D+ + +VPT+ + E+ + +D G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTL---HPTSEELTIAGMTFTTFDLGGHEQA 92 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDS---LENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 R+ P + I+ F +D D +E+ E NVPI+++GNK D R Sbjct: 93 RRVWKNYLPAINGIV--FLVDCADHSRLVESKVELNALMTDETISNVPILILGNKID-RT 149 Query: 124 DEHTRREL 131 D + +L Sbjct: 150 DAISEEKL 157 >5UF8-A nrPDB Length = 181 Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 12/87 (13%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L K + E+ +PT+ N V+ K + +WD GQ Sbjct: 19 RILMVGLDAAGKTTILY---KLKLGEIVTTIPTIGFNVET---VEYKNISFTVWDVGGQ- 71 Query: 65 DYDRLRPL-SYPDTDVILMCFSIDSPD 90 D++RPL Y + + F +DS D Sbjct: 72 --DKIRPLWRYYFQNTQGIIFVVDSND 96 >2H57-A nrPDB Length = 190 Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 11/78 (14%) Query: 53 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW-------TPEVKH 105 + ++D +GQ Y L Y + I+ F IDS D L + K P++KH Sbjct: 67 LSFTVFDMSGQGRYRNLWEHYYKEGQAII--FVIDSSDRLRMVVAKEELDTLLNHPDIKH 124 Query: 106 FCPNVPIILVGNKKDLRN 123 +PI+ NK DLR+ Sbjct: 125 --RRIPILFFANKMDLRD 140 >4WNR-A nrPDB Length = 349 Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust. Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 13/139 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG-----KQVELALWDTA 61 K+++VGDG GKT LL K E + + +I+ G K++++ WD Sbjct: 43 KVLLVGDGEAGKTSLL----KRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFG 98 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQE + ++ +DS + E W ++ F + P+++ NK D Sbjct: 99 GQEIMHATHQFFLSKRSLYILV--LDS--RRDEKAEYWLKHIRSFGGDSPVLVALNKIDE 154 Query: 122 RNDEHTRRELAKMKQEPVK 140 R+ + K +K Sbjct: 155 NPSFELNRKFLQEKYPSIK 173 >6FAE-B nrPDB Length = 213 Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 17/124 (13%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ Sbjct: 51 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ--- 103 Query: 67 DRLRPL---SYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP----NVPIILVGNKK 119 D++RPL + +T ++ F +DS D E + E ++ + +++ NK+ Sbjct: 104 DKIRPLWRHYFQNTQGLI--FVVDSNDR-ERVNEAREELMRMLAEDELRDAVLLVFANKQ 160 Query: 120 DLRN 123 DL N Sbjct: 161 DLPN 164 >3AQ4-A nrPDB Length = 184 Score = 33.5 bits (75), Expect = 0.062, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 16/89 (17%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L K + E+ +PT+ N V+ K + +WD GQ Sbjct: 22 RILMVGLDAAGKTTILY---KLKLGEIVTTIPTIGFNVET---VEYKNISFTVWDVGGQ- 74 Query: 65 DYDRLRPL---SYPDTDVILMCFSIDSPD 90 D++RPL + +T ++ F +DS D Sbjct: 75 --DKIRPLWRHYFQNTQGLI--FVVDSND 99 >3O47-A nrPDB Length = 329 Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 17/124 (13%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ Sbjct: 167 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ--- 219 Query: 67 DRLRPL---SYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP----NVPIILVGNKK 119 D++RPL + +T ++ F +DS D E + E ++ + +++ NK+ Sbjct: 220 DKIRPLWRHYFQNTQGLI--FVVDSNDR-ERVNEAREELMRMLAEDELRDAVLLVFANKQ 276 Query: 120 DLRN 123 DL N Sbjct: 277 DLPN 280 >3H2Y-A nrPDB Length = 368 Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 12/90 (13%) Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLE-------NIPEKWTPEVKHFCPNVPIILVGNK 118 Y+ ++ +S D D + + I D+L + W P + F N ++LVGNK Sbjct: 46 YNEIQDVSLTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNK 105 Query: 119 KDL-----RNDEHTRRELAKMKQEPVKPEE 143 DL ++D+ KQ +KPE+ Sbjct: 106 ADLIPKSVKHDKVKHWMRYSAKQLGLKPED 135 >4V0N-A nrPDB Length = 169 Score = 33.1 bits (74), Expect = 0.073, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 15/127 (11%) Query: 2 AAIRKKLVIVGDGACGKTCLL--IVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 A+ + +++VG GKT ++ + Q EV PTV + D EV+ + ++D Sbjct: 3 ASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEV-APTV--GFTVD-EVEKGPLTFTVFD 58 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-----VPIIL 114 +G Y L Y + D ++ F +DS D L + + E++H + VPI+ Sbjct: 59 MSGAGRYRTLWEQYYREADAVV--FVVDSADKLRMVVAR--DEMEHMLKHSNMRKVPILY 114 Query: 115 VGNKKDL 121 NKKDL Sbjct: 115 FANKKDL 121 >1M2O-B nrPDB Length = 190 Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 38/186 (20%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEV---YVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KL+ +G GKT LL + D+ + + PT E + +I+ +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIK-------FTTFDLGGH 77 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSP----------DSLENIPEKWTPEVKHFCPNVPII 113 RL +P+ + I+ P D+L NI E +VP + Sbjct: 78 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAE---------LKDVPFV 128 Query: 114 LVGNKKDLRN---DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 ++GNK D N + R L + + EG+ CS ++G E Sbjct: 129 ILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVE------VFMCSVVMRNGYLEA 182 Query: 171 FEMATR 176 F+ ++ Sbjct: 183 FQWLSQ 188 >5NZV-F nrPDB Length = 181 Score = 32.7 bits (73), Expect = 0.094, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 16/89 (17%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG GKT +L K + EV +PT+ N V K + +WD GQ Sbjct: 19 RILMVGLDGAGKTTVLY---KLKLGEVITTIPTIGFNVET---VQYKNISFTVWDVGGQ- 71 Query: 65 DYDRLRPL---SYPDTDVILMCFSIDSPD 90 DR+R L Y +T+ ++ F +DS D Sbjct: 72 --DRIRSLWRHYYRNTEGVI--FVVDSND 96 >1F6B-A nrPDB Length = 198 Score = 32.7 bits (73), Expect = 0.095, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 9/117 (7%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV +G GKT LL + D+ + +VPT+ + E+ + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTL---HPTSEELTIAGMTFTTFDLGGHIQA 82 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDS---LENIPEKWTPEVKHFCPNVPIILVGNKKD 120 R+ P + I+ F +D D LE+ E + NVPI+++GNK D Sbjct: 83 RRVWKNYLPAINGIV--FLVDCADHERLLESKEELDSLMTDETIANVPILILGNKID 137 >6GNI-B nrPDB Length = 167 Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/186 (22%), Positives = 69/186 (37%), Gaps = 38/186 (20%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEV---YVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KL+ +G GKT LL + D+ + + PT E + +I+ +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIK-------FTTFDLGGH 55 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSP----------DSLENIPEKWTPEVKHFCPNVPII 113 RL +P+ + I+ P D+L NI E +VP + Sbjct: 56 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAE---------LKDVPFV 106 Query: 114 LVGNKKDLRN---DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 ++GNK D N + R L + + EG+ CS ++G E Sbjct: 107 ILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVE------VFMCSVVMRNGYLEA 160 Query: 171 FEMATR 176 F+ ++ Sbjct: 161 FQWLSQ 166 >6CES-A nrPDB Length = 313 Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 43/135 (31%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV--------ADIEVDGKQV 53 A++KK++++G GKT + + +F NY+ A I+V+ V Sbjct: 4 TAMKKKVLLMGKSGSGKTSMRSI-------------IFANYIARDTRRLGATIDVEHSHV 50 Query: 54 E------LALWDTAGQED-----YDRLRPLSYPDTDVILMCFSIDSPD----------SL 92 L LWD GQ+ + R + + +V++ F ++S + L Sbjct: 51 RFLGNLVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCL 110 Query: 93 ENIPEKWTPEVKHFC 107 E I + +P+ K FC Sbjct: 111 EAILQN-SPDAKIFC 124 >2R82-A nrPDB Length = 874 Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Query: 108 PNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGV 167 P + I LVG KK+L+ + E+A E VK E+G DM IG + +A T D + Sbjct: 701 PEIMIPLVGEKKELKFVKDVVVEVA----EQVKKEKGSDMQYHIGTMIEIPRAALTADAI 756 Query: 168 RE 169 E Sbjct: 757 AE 758 >5YMX-A nrPDB Length = 203 Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 24/176 (13%) Query: 7 KLVIVGDGACGKTC-LLIVFSKD---------QFPEVYVPTVFENY--VADIEVDGKQVE 54 K+V G G CGKT L +++K T+F ++ ++ E+ G + Sbjct: 14 KIVYYGPGLCGKTTNLQYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFKTR 73 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSP--------DSLENIPEKWTPEVKHF 106 L+ GQ YD R L D ++ F DS +SLEN+ E + Sbjct: 74 FHLYTVPGQVFYDASRKLILKGVDGVV--FVADSQIERMEANMESLENLRINLA-EQGYD 130 Query: 107 CPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAK 162 +P ++ NK+DL N T E+ K PE +G F ++ AK Sbjct: 131 LNKIPYVIQYNKRDLPN-AVTVEEMRKALNHRNIPEYQAVAPTGVGVFDTLKAVAK 185 >2QAG-A nrPDB Length = 361 Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 8 LVIVGDGACGKTCLL-IVFSKDQFPEVYVPTV---------FENYVADIEVDGKQVELAL 57 L++VG+ GK+ L+ +F D +PE +P E +IE G ++ L + Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 99 Query: 58 WDTAGQED 65 DT G D Sbjct: 100 VDTPGYGD 107 >2HJR-A nrPDB Length = 328 Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 18/129 (13%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA-- 61 +RKK+ I+G G G T L++ KD +VY+ + E +D + A Sbjct: 13 MRKKISIIGAGQIGSTIALLLGQKD-LGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKI 71 Query: 62 -GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLE---------NIPEKWTPEVKHFCPNVP 111 G+ +Y+ L+ ++DV+++ + ++ I V +CPN Sbjct: 72 FGENNYEYLQ-----NSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAF 126 Query: 112 IILVGNKKD 120 +I + N D Sbjct: 127 VICITNPLD 135 >3DPU-A nrPDB Length = 535 Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 13/123 (10%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE---------LAL 57 K+ ++GDG GKT LL + F T N V + K +E Sbjct: 43 KVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHF 102 Query: 58 WDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 117 WD GQE + V ++ +DS ++ W ++ + P+I+V N Sbjct: 103 WDFGGQEIMHASHQFFMTRSSVYMLL--LDS--RTDSNKHYWLRHIEKYGGKSPVIVVMN 158 Query: 118 KKD 120 K D Sbjct: 159 KID 161 >3P7M-A nrPDB Length = 321 Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 18/132 (13%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ---VELALW 58 A RKK+ +VG G G T + K Q +V + + + +D Q +E + Sbjct: 2 AMARKKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDF 60 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSID-----SPDSLENIPEKWTPEV----KHFCPN 109 G DY L ++DV+++ + S D L I K V KH CPN Sbjct: 61 KVRGTNDYKDLE-----NSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPN 115 Query: 110 VPIILVGNKKDL 121 +I + N D+ Sbjct: 116 AFVICITNPLDI 127 >3FTQ-A nrPDB Length = 274 Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 8 LVIVGDGACGKTCLL-IVFSKDQFPEVYVPTV---------FENYVADIEVDGKQVELAL 57 L++VG+ GK+ L+ +F D +PE +P E +IE G ++ L + Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 67 Query: 58 WDTAGQED 65 DT G D Sbjct: 68 VDTPGYGD 75 >6OIK-A nrPDB Length = 354 Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 29/151 (19%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH----- 105 K + L+D GQ + + D I+ C ++ D + + E T H Sbjct: 193 KNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVALSGYDQV--LHEDETTNRMHESLML 250 Query: 106 --------FCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGA---- 153 F + IIL NKKDL ++ + L E P D A I A Sbjct: 251 FDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFES 310 Query: 154 ---------FGYMECSAKTKDGVREVFEMAT 175 + +M C+ T + ++ VF+ T Sbjct: 311 KNRSPNKEIYCHMTCATDT-NNIQVVFDAVT 340 >4ND4-A nrPDB Length = 321 Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 18/129 (13%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA--- 61 R+K+ ++G G G IV KD +V + + E +D + T+ Sbjct: 4 RRKIAVIGSGQIGGNIAYIV-GKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI 62 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSI------DSPDSL---ENIPEKWTPEVKHFCPNVPI 112 G DY + +DV+++ SI D + L I + VK +CPN + Sbjct: 63 GTNDYADIS-----GSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFV 117 Query: 113 ILVGNKKDL 121 I + N D+ Sbjct: 118 ICITNPLDV 126 >3OKC-A nrPDB Length = 394 Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 7/98 (7%) Query: 72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRREL 131 L + DT ++ C S P ++ K P+V P+ +++VG+ + E T R L Sbjct: 192 LGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR----YESTLRRL 247 Query: 132 AKMKQEPVK---PEEGRDMANRIGAFGYMECSAKTKDG 166 A + VK E +DM N + A A+T+ G Sbjct: 248 ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGG 285 >5NTF-A nrPDB Length = 520 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 15 ACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71 A G+TC +++ PE +V T F + VAD+ KQV A AGQ + L P Sbjct: 432 ASGETCFPVLYC----PEYHV-TEFRSPVADMRNSVKQVNNASVSCAGQFVANHLSP 483 >6DQW-A nrPDB Length = 585 Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Query: 33 VYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSL 92 +Y P + E++V IE + +W G E R P+S CF++ PD + Sbjct: 78 LYKPELKESFVEMIERGWMSISSPVWANMGTE---RGLPIS---------CFNVHVPDKI 125 Query: 93 ENIPEK 98 E I K Sbjct: 126 EGITHK 131 >3FSL-A nrPDB Length = 397 Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Query: 121 LRNDEHTRRELAKMKQEPVK------PEEGRD-MANRIGAFGYMECSAKTKDGVREVF 171 L+ E R + M+QE VK PE D + N+ G F Y SA D +RE F Sbjct: 309 LKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEF 366 >1MOZ-A nrPDB Length = 183 Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYV--PTVFENYVADIEVDGKQVELALWDTAGQE 64 +++I+G GKT +L + Q EV PT+ N + K ++L +WD GQ Sbjct: 20 RILILGLDGAGKTTILY---RLQIGEVVTTKPTIGFNVET---LSYKNLKLNVWDLGGQT 73 Query: 65 DYDRLRPL---SYPDTDVILMCFSIDSPD 90 +RP Y DT ++ F +DS D Sbjct: 74 S---IRPYWRCYYADTAAVI--FVVDSTD 97 >5WU6-A nrPDB Length = 485 Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 19 TCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71 T L+I F + + P V +PTV + + +G+QVE+ WD + D RL P Sbjct: 313 TLLVIYFLQTRDPPV-LPTV--SQLTQKAGEGEQVEVDGWDCSFPRDASRLEP 362 >5WU3-A nrPDB Length = 573 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 19 TCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71 T L+I F + + P V +PTV + + +G+QVE+ WD + D RL P Sbjct: 226 TLLVIYFLQTRDPPV-LPTV--SQLTQKAGEGEQVEVDGWDCSFPRDASRLEP 275 >4PLF-A nrPDB Length = 334 Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 23/134 (17%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 RKK+ ++G G G T + K + +V + V +N GK ++L+ + Sbjct: 8 RKKISLIGSGMIGGTMAYLCAQK-ELGDVVLFDVVKNMP-----QGKALDLSHSSSIADT 61 Query: 65 DYDRLRPLSYPD---TDVILMCFSID----------SPDSLENIPEKWTPEV----KHFC 107 + SY D +DV+++ + S D L K EV K +C Sbjct: 62 NVKVTGTNSYEDIKGSDVVIITAGLTKAPGKSDKEWSRDDLLPFNAKIMREVGENIKKYC 121 Query: 108 PNVPIILVGNKKDL 121 PN +I++ N D+ Sbjct: 122 PNAFVIVITNPLDV 135 >3EC1-A nrPDB Length = 369 Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 7/65 (10%) Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLE-NIPE------KWTPEVKHFCPNVPIILVG 116 + Y+ ++ + D D + M I +L NI + + P + F + PI+LVG Sbjct: 46 KHYNEVQDVPLDDDDFLSMLHRIGESKALVVNIVDIFDFNGSFIPGLPRFAADNPILLVG 105 Query: 117 NKKDL 121 NK DL Sbjct: 106 NKADL 110 >4K3B-A nrPDB Length = 792 Score = 26.9 bits (58), Expect = 5.2, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 112 IILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYME 158 I + GN K DE RREL +M+ P + + R+ GY + Sbjct: 352 IHITGNNKT--RDEVVRRELRQMESAPYDTSKLQRSKERVELLGYFD 396 >5LJ5-s nrPDB Length = 175 Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGA 153 D+ ++E A +K+EPV PE +A R GA Sbjct: 21 DQLVKKEFANIKREPVHPEIRGILAKRKGA 50 >6HLU-A nrPDB Length = 974 Score = 26.9 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 21/127 (16%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-----------VADIEVDG--KQV 53 K+ ++GDG GKT LL K E + P + + + +E D K+ Sbjct: 482 KVHLIGDGMAGKTSLL----KQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKEC 537 Query: 54 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 113 WD GQE + V ++ +DS ++ W ++ + P+I Sbjct: 538 LFHFWDFGGQEIMHASHQFFMTRSSVYMLL--LDS--RTDSNKHYWLRHIEKYGGKSPVI 593 Query: 114 LVGNKKD 120 +V NK D Sbjct: 594 VVMNKID 600 >4PLW-A nrPDB Length = 326 Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust. Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 28/134 (20%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY----VADIE----VDGKQVELA 56 RKK+ ++G G G T L + ++ + +V + + E DI + G V++ Sbjct: 4 RKKISLIGAGNIGGT-LAHLIAQKELGDVVLFDIVEGMPQGKALDISHSSPIMGSNVKIT 62 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSID-----SPDSLENIPEKWTPEV----KHFC 107 G +Y+ ++ +DV+++ I S D L ++ K +V K +C Sbjct: 63 -----GTNNYEDIK-----GSDVVIITAGIPRKPGMSRDDLLSVNAKIMKDVAENIKKYC 112 Query: 108 PNVPIILVGNKKDL 121 PN +I+V N D+ Sbjct: 113 PNAFVIVVTNPLDV 126 >4MNK-A nrPDB Length = 348 Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 10/123 (8%) Query: 72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV--GNKKDLRNDEHTRR 129 L Y ++ F + P E E +TP V+ P+V ++ G ++R++ Sbjct: 31 LYYAFAELNAPTFEVRVPPGSEKTAEDFTPTVRRLNPSVKTLISIGGGGSEVRDNFAKLN 90 Query: 130 ELAKMKQEPVKPEEGRDMANRIGAFG------YMECSAKTKDGVREVFEMATRAALQARR 183 A +Q VK +A R G G Y E + ++ V+ V E+ +AR Sbjct: 91 SDASARQRFVKSSIA--LARRYGFHGLDLDYEYPEPQLEMENFVKLVSELTAAIREEART 148 Query: 184 GKK 186 K Sbjct: 149 SGK 151 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5C2K-A nrPDB 299 8e-82 5ZHX-e nrPDB 295 9e-81 5JCP-B nrPDB 272 5e-74 2FV8-A nrPDB 260 3e-70 3TH5-A nrPDB 243 3e-65 5ZVP-A nrPDB 243 5e-65 3RYT-C nrPDB 241 2e-64 3A58-B nrPDB 240 4e-64 2J0V-A nrPDB 235 7e-63 2WKQ-A nrPDB 235 1e-62 2J1L-A nrPDB 234 1e-62 1RYH-A nrPDB 233 5e-62 2W2X-A nrPDB 232 7e-62 2ATX-A nrPDB 232 1e-61 2NTY-C nrPDB 232 1e-61 3BWD-D nrPDB 232 1e-61 2WBL-C nrPDB 231 1e-61 3VHL-B nrPDB 231 1e-61 5VCU-A nrPDB 223 4e-59 4U5X-A nrPDB 221 1e-58 2Q3H-A nrPDB 220 4e-58 4MIT-A nrPDB 212 6e-56 1GWN-A nrPDB 211 1e-55 1M7B-A nrPDB 209 6e-55 2RHD-A nrPDB 207 3e-54 5SZI-A nrPDB 204 2e-53 5SZH-B nrPDB 203 3e-53 4LHX-A nrPDB 203 3e-53 3L0I-B nrPDB 203 4e-53 3CPH-A nrPDB 201 1e-52 2A5J-A nrPDB 200 3e-52 1Z0A-A nrPDB 200 3e-52 5FBL-B nrPDB 200 4e-52 4QXA-A nrPDB 200 4e-52 1Z0F-A nrPDB 199 6e-52 6IF2-B nrPDB 199 7e-52 2OCB-A nrPDB 198 1e-51 1WMS-A nrPDB 198 1e-51 2OCY-C nrPDB 198 2e-51 5SZJ-A nrPDB 197 2e-51 6O62-A nrPDB 197 2e-51 3CUE-F nrPDB 196 4e-51 2WWX-A nrPDB 196 4e-51 1YZN-A nrPDB 196 4e-51 4M8N-E nrPDB 196 5e-51 5LPN-A nrPDB 196 5e-51 2F9L-A nrPDB 196 6e-51 4G01-B nrPDB 196 7e-51 1ZBD-A nrPDB 195 1e-50 2GF9-A nrPDB 195 1e-50 2O52-A nrPDB 195 1e-50 4RKE-A nrPDB 194 2e-50 1X3S-A nrPDB 194 3e-50 5LDD-C nrPDB 194 3e-50 4UJ4-A nrPDB 193 5e-50 3CPJ-B nrPDB 193 6e-50 4DXA-A nrPDB 192 8e-50 3RAB-A nrPDB 192 9e-50 2HEI-A nrPDB 191 1e-49 4RKF-A nrPDB 191 2e-49 1TU4-A nrPDB 191 2e-49 3DZ8-A nrPDB 190 4e-49 5UB8-A nrPDB 190 4e-49 2BMD-A nrPDB 190 4e-49 4KLZ-A nrPDB 190 5e-49 5XR6-A nrPDB 189 5e-49 2REX-B nrPDB 188 1e-48 2HUP-A nrPDB 188 1e-48 2IL1-A nrPDB 188 2e-48 4PHF-A nrPDB 188 2e-48 1EK0-A nrPDB 187 2e-48 2FG5-A nrPDB 187 3e-48 2EW1-A nrPDB 187 3e-48 4KYI-B nrPDB 187 3e-48 2G6B-A nrPDB 187 3e-48 5YOZ-A nrPDB 186 6e-48 2F7S-A nrPDB 185 8e-48 5CM8-B nrPDB 184 2e-47 2KE5-A nrPDB 184 2e-47 3BFK-A nrPDB 183 3e-47 1D5C-A nrPDB 183 3e-47 3REG-A nrPDB 183 3e-47 6IYB-A nrPDB 183 4e-47 3RWM-B nrPDB 183 6e-47 1YVD-A nrPDB 181 1e-46 6HUF-A nrPDB 181 1e-46 2FFQ-A nrPDB 181 2e-46 3BC1-A nrPDB 181 2e-46 2IEZ-A nrPDB 180 4e-46 1ZC4-A nrPDB 180 4e-46 3CON-A nrPDB 180 4e-46 2IEY-A nrPDB 179 6e-46 3TSO-A nrPDB 178 1e-45 1YZU-A nrPDB 178 1e-45 2G77-B nrPDB 178 2e-45 2ERX-A nrPDB 177 3e-45 1Z06-A nrPDB 176 3e-45 2GIL-A nrPDB 176 3e-45 5LEF-A nrPDB 176 4e-45 4KU4-A nrPDB 175 9e-45 5WDQ-A nrPDB 175 1e-44 2P5S-A nrPDB 175 1e-44 5UHV-A nrPDB 174 2e-44 1Z22-A nrPDB 174 3e-44 4WA7-A nrPDB 173 4e-44 5HZH-A nrPDB 173 5e-44 2FN4-A nrPDB 172 1e-43 5WDR-A nrPDB 170 3e-43 2ERY-A nrPDB 170 4e-43 4FMC-F nrPDB 169 5e-43 2ATV-A nrPDB 168 1e-42 3CBQ-A nrPDB 165 9e-42 2G3Y-A nrPDB 164 2e-41 2CJW-A nrPDB 164 2e-41 3PIR-A nrPDB 163 4e-41 2GF0-A nrPDB 163 6e-41 2N1B-A nrPDB 161 2e-40 5UWI-A nrPDB 161 2e-40 3T5G-A nrPDB 160 3e-40 5CLL-A nrPDB 160 3e-40 3Q85-A nrPDB 159 5e-40 3RAP-R nrPDB 158 2e-39 4CZ2-A nrPDB 158 2e-39 3WYF-A nrPDB 157 3e-39 3OES-A nrPDB 156 4e-39 3Q72-A nrPDB 156 6e-39 5XOJ-A nrPDB 156 7e-39 6FF8-A nrPDB 156 8e-39 2NZJ-A nrPDB 151 2e-37 5XC3-A nrPDB 146 8e-36 3E5H-A nrPDB 144 2e-35 3CLV-A nrPDB 141 1e-34 4DJT-A nrPDB 138 1e-33 5C1S-A nrPDB 128 2e-30 3C5C-A nrPDB 122 1e-28 2AL7-A nrPDB 110 4e-25 2YC4-C nrPDB 109 9e-25 3D6T-B nrPDB 108 2e-24 4ILE-A nrPDB 106 5e-24 2LKD-A nrPDB 101 3e-22 Sequences not found previously or not previously below threshold: 3IHW-A nrPDB 87 4e-18 4WNR-A nrPDB 78 3e-15 2IWR-A nrPDB 78 3e-15 6HLU-A nrPDB 76 6e-15 3DPU-A nrPDB 76 1e-14 3LVQ-E nrPDB 76 1e-14 4YLG-A nrPDB 75 2e-14 2A5F-A nrPDB 74 5e-14 3LRP-A nrPDB 73 5e-14 2H16-A nrPDB 72 2e-13 1YZG-A nrPDB 72 2e-13 6BBQ-A nrPDB 72 2e-13 1Z6X-A nrPDB 71 2e-13 5NZV-F nrPDB 71 3e-13 6FAE-B nrPDB 71 4e-13 3O47-A nrPDB 70 5e-13 4KJZ-A nrPDB 69 1e-12 4B44-A nrPDB 69 1e-12 3J4J-A nrPDB 68 2e-12 2B6H-A nrPDB 68 2e-12 3AQ4-A nrPDB 68 3e-12 6GB2-BC nrPDB 68 3e-12 6DFF-C nrPDB 68 3e-12 5UF8-A nrPDB 67 4e-12 1J2J-A nrPDB 67 4e-12 3IZY-P nrPDB 67 4e-12 4ZI3-A nrPDB 67 6e-12 3JCN-b nrPDB 65 2e-11 1ZO1-I nrPDB 65 2e-11 3BH6-A nrPDB 64 4e-11 1MOZ-A nrPDB 64 4e-11 5EE5-B nrPDB 64 5e-11 4V0N-A nrPDB 63 1e-10 2H57-A nrPDB 63 1e-10 2YWH-A nrPDB 62 1e-10 1KSG-A nrPDB 61 3e-10 4C0K-A nrPDB 61 3e-10 2GAO-A nrPDB 60 8e-10 4ARZ-A nrPDB 57 5e-09 5DE3-A nrPDB 56 1e-08 1M2O-B nrPDB 55 2e-08 6GNI-B nrPDB 55 2e-08 1F6B-A nrPDB 55 2e-08 5J8B-z nrPDB 54 3e-08 5IMR-C nrPDB 54 3e-08 6CES-A nrPDB 54 3e-08 2GJ9-A nrPDB 54 4e-08 5YT0-A nrPDB 53 8e-08 5FG3-A nrPDB 53 1e-07 2X77-A nrPDB 53 1e-07 3CB4-D nrPDB 51 4e-07 3GEH-A nrPDB 51 4e-07 1XZP-A nrPDB 50 8e-07 5DI3-B nrPDB 49 1e-06 4M9Q-A nrPDB 49 1e-06 4BAS-A nrPDB 49 2e-06 5LAD-A nrPDB 48 2e-06 1WF3-A nrPDB 48 2e-06 4NCL-A nrPDB 48 3e-06 4N3G-A nrPDB 48 3e-06 4TN1-B nrPDB 48 4e-06 3T1O-A nrPDB 46 8e-06 3J8G-X nrPDB 46 1e-05 1G7S-A nrPDB 46 1e-05 5YMX-A nrPDB 45 2e-05 2E87-A nrPDB 45 3e-05 2DYK-A nrPDB 44 3e-05 2QAG-A nrPDB 44 4e-05 3FTQ-A nrPDB 44 4e-05 4UJC-AB nrPDB 44 5e-05 3GEE-A nrPDB 44 5e-05 5DN8-A nrPDB 43 6e-05 1MKY-A nrPDB 43 7e-05 3JB9-B nrPDB 43 9e-05 1ZUN-B nrPDB 42 2e-04 3R9W-A nrPDB 42 2e-04 5KU1-A nrPDB 42 2e-04 5KH0-A nrPDB 42 2e-04 3EC1-A nrPDB 41 2e-04 5KSO-A nrPDB 41 3e-04 4V7F-o nrPDB 41 3e-04 6IAE-A nrPDB 41 3e-04 6GDG-D nrPDB 41 4e-04 4WQY-BZ nrPDB 40 7e-04 6D4G-A nrPDB 39 0.001 5CYO-A nrPDB 39 0.001 6G79-A nrPDB 39 0.001 3T5D-A nrPDB 39 0.001 4V8Y-CP nrPDB 39 0.001 2CXX-A nrPDB 39 0.001 3LLU-A nrPDB 39 0.002 2Q3F-A nrPDB 38 0.002 5A9Z-CA nrPDB 38 0.002 4NCF-A nrPDB 38 0.002 3WBI-A nrPDB 38 0.002 4V8Z-CV nrPDB 38 0.002 4ZU9-A nrPDB 38 0.002 5KUT-A nrPDB 38 0.003 3IEU-A nrPDB 38 0.003 2QAG-C nrPDB 38 0.003 3C5H-A nrPDB 37 0.003 3PR1-A nrPDB 37 0.004 2GTP-A nrPDB 37 0.005 2P8Y-T nrPDB 37 0.005 6CES-C nrPDB 37 0.007 1HEY-A nrPDB 36 0.008 4AC9-A nrPDB 36 0.009 3V00-C nrPDB 36 0.010 5ZZM-A nrPDB 36 0.011 4YMS-J nrPDB 36 0.013 2ODE-A nrPDB 36 0.015 6ID0-C nrPDB 35 0.022 5TY0-A nrPDB 35 0.022 5H7J-A nrPDB 34 0.031 6F1T-i nrPDB 34 0.037 6N0I-A nrPDB 34 0.039 3K53-A nrPDB 34 0.040 3H2Y-A nrPDB 34 0.041 5H7K-A nrPDB 34 0.046 5NON-A nrPDB 34 0.053 2VNE-A nrPDB 34 0.053 1SHZ-A nrPDB 34 0.054 6F1Y-j nrPDB 34 0.056 4V7D-BZ nrPDB 33 0.062 5IRR-A nrPDB 33 0.074 1U0L-A nrPDB 33 0.084 2YYZ-A nrPDB 32 0.11 4Z54-A nrPDB 32 0.11 4V89-AW nrPDB 32 0.11 5W75-A nrPDB 32 0.11 1ZCB-A nrPDB 32 0.15 1SUL-A nrPDB 32 0.15 5X4B-A nrPDB 32 0.16 5TV2-A nrPDB 32 0.17 4U00-A nrPDB 32 0.17 5OCH-A nrPDB 32 0.19 4DCU-A nrPDB 32 0.21 6B8D-A nrPDB 31 0.24 1WDT-A nrPDB 31 0.26 1JNY-A nrPDB 31 0.26 4FN5-A nrPDB 31 0.27 4MKI-B nrPDB 31 0.29 6HZK-A nrPDB 31 0.30 1YE8-A nrPDB 31 0.30 1PUJ-A nrPDB 31 0.30 3TR5-A nrPDB 31 0.31 6NOT-A nrPDB 31 0.38 5AR1-A nrPDB 31 0.38 4TLD-A nrPDB 31 0.40 3S1A-A nrPDB 31 0.45 5B3F-A nrPDB 31 0.49 1QVR-A nrPDB 31 0.50 4KV9-A nrPDB 30 0.51 3N5F-A nrPDB 30 0.53 4XGC-E nrPDB 30 0.56 2NQL-A nrPDB 30 0.56 1R6B-X nrPDB 30 0.56 5C78-A nrPDB 30 0.58 5OFO-C nrPDB 30 0.61 4CIU-A nrPDB 30 0.64 5JSZ-B nrPDB 30 0.66 5IDV-A nrPDB 30 0.71 4HSE-A nrPDB 30 0.72 1JBK-A nrPDB 30 0.72 5GM6-Y nrPDB 30 0.73 2IW3-A nrPDB 30 0.74 6ED3-A nrPDB 30 0.84 2GZA-A nrPDB 30 0.85 4MYH-A nrPDB 30 0.86 4HZI-A nrPDB 29 0.92 5M04-A nrPDB 29 0.94 1ZCA-A nrPDB 29 0.97 2QTH-A nrPDB 29 0.98 3IZQ-1 nrPDB 29 1.1 5MKK-A nrPDB 29 1.1 5FM7-A nrPDB 29 1.1 3PXG-A nrPDB 29 1.1 5AJ2-A nrPDB 29 1.1 3J3U-A nrPDB 29 1.1 2YV5-A nrPDB 29 1.1 5MRE-WW nrPDB 29 1.1 3PXI-A nrPDB 29 1.1 3P27-A nrPDB 29 1.1 1NI3-A nrPDB 29 1.1 6I3O-A nrPDB 29 1.1 1EFM-A nrPDB 29 1.1 4CSU-9 nrPDB 29 1.2 2RGK-A nrPDB 29 1.2 2QU8-A nrPDB 29 1.2 1H65-A nrPDB 29 1.2 6H7G-A nrPDB 29 1.4 2IYT-A nrPDB 29 1.4 4HUQ-A nrPDB 29 1.4 3VQT-A nrPDB 29 1.4 3LLM-A nrPDB 29 1.5 6G2G-A nrPDB 29 1.5 5VHD-D nrPDB 29 1.6 4YPL-A nrPDB 29 1.6 6HA8-V nrPDB 29 1.7 1IHU-A nrPDB 29 1.7 3GD7-A nrPDB 29 1.7 5LZD-z nrPDB 29 1.8 3FVQ-A nrPDB 29 1.8 3B5X-A nrPDB 29 1.8 1TAG-A nrPDB 29 1.8 3DEF-A nrPDB 29 1.8 3VX4-A nrPDB 29 1.9 5D4W-A nrPDB 29 1.9 6D00-1 nrPDB 28 2.0 4RY2-A nrPDB 28 2.0 4YPN-A nrPDB 28 2.1 6EM8-A nrPDB 28 2.2 6EMW-E nrPDB 28 2.2 3PV0-A nrPDB 28 2.3 2ZBL-A nrPDB 28 2.3 6OIK-A nrPDB 28 2.4 6QUZ-B nrPDB 28 2.4 4J0Q-A nrPDB 28 2.5 3A1W-A nrPDB 28 2.5 6IC4-I nrPDB 28 2.5 4A9A-A nrPDB 28 2.5 2PJZ-A nrPDB 28 2.5 1WXQ-A nrPDB 28 2.5 5W7Q-A nrPDB 28 2.6 2P4Q-A nrPDB 28 2.7 4N1A-A nrPDB 28 2.8 6G12-A nrPDB 28 2.8 1R5O-A nrPDB 28 2.8 6C2V-A nrPDB 28 2.9 5W76-A nrPDB 28 2.9 4MRS-A nrPDB 28 2.9 6FA9-A nrPDB 28 3.0 5NIK-J nrPDB 28 3.1 4O0M-A nrPDB 28 3.2 5LJA-A nrPDB 28 3.2 3MMP-A nrPDB 28 3.2 2P65-A nrPDB 28 3.2 4Q7L-A nrPDB 28 3.3 1YR7-A nrPDB 27 3.4 6FT6-s nrPDB 27 3.5 5LKM-A nrPDB 27 3.5 3A1U-A nrPDB 27 3.5 4V5G-AZ nrPDB 27 3.5 2CBZ-A nrPDB 27 3.6 2IT1-A nrPDB 27 3.7 5ZLU-EE nrPDB 27 3.8 5JWO-A nrPDB 27 3.8 5DO7-A nrPDB 27 3.8 5ZME-A nrPDB 27 3.9 4C3Z-A nrPDB 27 3.9 3LXX-A nrPDB 27 4.1 5GKO-A nrPDB 27 4.1 6QUZ-A nrPDB 27 4.3 5XU1-A nrPDB 27 4.4 3R7W-B nrPDB 27 4.4 2OCP-A nrPDB 27 4.4 4ZV4-A nrPDB 27 4.5 5B57-C nrPDB 27 4.5 4FID-A nrPDB 27 4.6 2QAG-B nrPDB 27 4.7 2WJG-A nrPDB 27 4.8 5DGX-A nrPDB 27 4.9 4KXX-A nrPDB 27 5.2 4Q7K-A nrPDB 27 5.2 5EE0-A nrPDB 27 5.3 6BZR-B nrPDB 27 5.4 4RI0-A nrPDB 27 5.4 2OHJ-A nrPDB 27 5.4 3LX8-A nrPDB 27 5.5 4R98-A nrPDB 27 5.5 1IRQ-A nrPDB 27 5.6 5D0U-A nrPDB 27 5.7 3D0O-A nrPDB 27 5.8 4UUM-A nrPDB 27 5.8 4XIG-S nrPDB 27 5.9 4HI0-E nrPDB 27 5.9 2WJI-A nrPDB 27 6.0 2GA8-A nrPDB 27 6.2 2NQ2-C nrPDB 27 6.2 6DJQ-A nrPDB 27 6.3 4YDS-A nrPDB 27 6.5 2D62-A nrPDB 27 6.6 1V5Y-A nrPDB 27 6.6 1T9H-A nrPDB 27 6.8 5I8Q-A nrPDB 27 7.0 2ZBK-A nrPDB 27 7.0 5LL6-h nrPDB 27 7.0 5L22-B nrPDB 27 7.0 6FOC-D nrPDB 27 7.2 2OUK-A nrPDB 27 7.3 5TV4-A nrPDB 27 7.4 3EPJ-A nrPDB 26 7.9 4XD7-D nrPDB 26 7.9 3WMF-A nrPDB 26 8.0 5LJ6-A nrPDB 26 8.2 6MAT-A nrPDB 26 8.4 4A2I-V nrPDB 26 8.6 2YK0-A nrPDB 26 8.6 5EUM-A nrPDB 26 8.6 2JAQ-A nrPDB 26 8.6 1IY1-A nrPDB 26 8.9 1EZ4-A nrPDB 26 9.2 2YZ2-A nrPDB 26 9.2 2BDT-A nrPDB 26 9.2 2GHI-A nrPDB 26 9.3 6FKI-F nrPDB 26 9.5 5NO4-Z nrPDB 26 9.5 1JAL-A nrPDB 26 9.6 4UUD-B nrPDB 26 9.7 3L43-A nrPDB 26 9.7 2DHR-A nrPDB 26 9.7 2AKA-B nrPDB 26 9.8 2PCL-A nrPDB 26 9.9 2YKR-W nrPDB 26 10.0 >5C2K-A nrPDB Length = 415 Score = 299 bits (765), Expect = 8e-82, Method: Composition-based stats. Identities = 192/193 (99%), Positives = 193/193 (100%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 8 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 67 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD Sbjct: 68 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 127 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ Sbjct: 128 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 187 Query: 181 ARRGKKKSGCLIL 193 ARRGKKKSGCL+L Sbjct: 188 ARRGKKKSGCLVL 200 >5ZHX-e nrPDB Length = 198 Score = 295 bits (755), Expect = 9e-81, Method: Composition-based stats. Identities = 191/192 (99%), Positives = 192/192 (100%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 6 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 65 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD Sbjct: 66 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 125 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ Sbjct: 126 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 185 Query: 181 ARRGKKKSGCLI 192 ARRGKKKSGCL+ Sbjct: 186 ARRGKKKSGCLV 197 >5JCP-B nrPDB Length = 419 Score = 272 bits (697), Expect = 5e-74, Method: Composition-based stats. Identities = 179/180 (99%), Positives = 179/180 (99%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 AAIRKKLVIVGDGACGKTCLLIV SKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 240 AAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 299 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL Sbjct: 300 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 359 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA Sbjct: 360 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 419 >2FV8-A nrPDB Length = 207 Score = 260 bits (664), Expect = 3e-70, Method: Composition-based stats. Identities = 158/185 (85%), Positives = 171/185 (92%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + IRKKLV+VGDGACGKTCLLIVFSKD+FPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 22 SMIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 81 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKDL Sbjct: 82 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 141 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 R+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 142 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 201 Query: 182 RRGKK 186 R G + Sbjct: 202 RYGSQ 206 >3TH5-A nrPDB Length = 204 Score = 243 bits (622), Expect = 3e-65, Method: Composition-based stats. Identities = 104/174 (59%), Positives = 127/174 (72%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQED Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 90 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 YDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILVG K DLR+D+ Sbjct: 91 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 150 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 T +L + K P+ +G MA IGA Y+ECSA T+ G++ VF+ A RA L Sbjct: 151 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >5ZVP-A nrPDB Length = 181 Score = 243 bits (620), Expect = 5e-65, Method: Composition-based stats. Identities = 134/179 (74%), Positives = 152/179 (84%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MA IR+KLVIVGDGACGKTCLLIV SK FPEVYVPTVFENYVAD+EVDGK VELALWDT Sbjct: 1 MAEIRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDT 60 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQEDYDRLRPLSYPD+ VIL+CF+IDSPDSL+N+ EKW EV HFC +PIILVG KKD Sbjct: 61 AGQEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKD 120 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 LR+D T EL K Q+PV PE+G ++ +IGA+ Y+ECSA+T +GVREVFE ATRAAL Sbjct: 121 LRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3RYT-C nrPDB Length = 180 Score = 241 bits (615), Expect = 2e-64, Method: Composition-based stats. Identities = 103/174 (59%), Positives = 126/174 (72%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAG ED Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLED 66 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 YDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILVG K DLR+D+ Sbjct: 67 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 126 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 T +L + K P+ +G MA IGA Y+ECSA T+ G++ VF+ A RA L Sbjct: 127 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >3A58-B nrPDB Length = 188 Score = 240 bits (612), Expect = 4e-64, Method: Composition-based stats. Identities = 132/180 (73%), Positives = 152/180 (84%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 +IR+KLVIVGDGACGKTCLLIV SK QFPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 8 SIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QEDYDRLRPLSYPD++V+L+CFSID PDSLEN+ EKW EV HFC VPIILVG K DLR Sbjct: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 ND T +L + Q+PV +EG+ +A++IGA GY ECSAKT GVREVFE ATRA+L + Sbjct: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 >2J0V-A nrPDB Length = 212 Score = 235 bits (601), Expect = 7e-63, Method: Composition-based stats. Identities = 90/196 (45%), Positives = 127/196 (64%), Gaps = 13/196 (6%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG+ V L LWDTAGQED Sbjct: 10 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQED 69 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 Y RLRPLSY D+ ++ FS+ S S EN+ +KW PE++ F PNVPI+LVG K DLR+D+ Sbjct: 70 YSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDK 129 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA---- 181 + + +G ++ +IGA Y+ECS+KT+ V+ VF+ A + LQ Sbjct: 130 GYLADHTN----VITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRK 185 Query: 182 -----RRGKKKSGCLI 192 R+ ++SGC I Sbjct: 186 EVPRRRKNHRRSGCSI 201 >2WKQ-A nrPDB Length = 332 Score = 235 bits (599), Expect = 1e-62, Method: Composition-based stats. Identities = 101/174 (58%), Positives = 125/174 (71%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAG ED Sbjct: 156 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLED 215 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 YDRLRPLSYP TDV L+CFS+ SP S ++ KW PEV+H CPN PIILVG K DLR+D+ Sbjct: 216 YDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 275 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 T +L + K P+ +G MA IGA Y+ECSA T+ G++ VF+ A RA L Sbjct: 276 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 >2J1L-A nrPDB Length = 214 Score = 234 bits (598), Expect = 1e-62, Method: Composition-based stats. Identities = 95/176 (53%), Positives = 122/176 (69%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 95 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 DRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC VPII+VG K DLR D+ Sbjct: 96 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKS 155 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 +L + EPV G++MA +GA Y+ECSA+ D V VF+ A AL +R Sbjct: 156 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 211 >1RYH-A nrPDB Length = 203 Score = 233 bits (594), Expect = 5e-62, Method: Composition-based stats. Identities = 103/197 (52%), Positives = 127/197 (64%), Gaps = 19/197 (9%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTA Sbjct: 2 SMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 61 Query: 62 GQEDYDRLRPLSYPD-------------------TDVILMCFSIDSPDSLENIPEKWTPE 102 GQEDYDRLRPLSYP DV L+CFS+ SP S EN+ KW PE Sbjct: 62 GQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPE 121 Query: 103 VKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAK 162 V+H CPN PIILVG K DLR+D+ T +L + K P+ +G MA IGA Y+ECSA Sbjct: 122 VRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSAL 181 Query: 163 TKDGVREVFEMATRAAL 179 T+ G++ VF+ A RA L Sbjct: 182 TQRGLKTVFDEAIRAVL 198 >2W2X-A nrPDB Length = 185 Score = 232 bits (592), Expect = 7e-62, Method: Composition-based stats. Identities = 98/174 (56%), Positives = 124/174 (71%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K V+VGD A GKTCLLI ++ + FP Y+PTVF+NY A++ VD K V L LWDTAGQED Sbjct: 10 IKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQED 69 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 YDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PIILVG K DLR+D+ Sbjct: 70 YDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDK 129 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 T +L + K P+ +G +A I + Y+ECSA T+ G++ VF+ A RA L Sbjct: 130 DTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >2ATX-A nrPDB Length = 194 Score = 232 bits (591), Expect = 1e-61, Method: Composition-based stats. Identities = 96/178 (53%), Positives = 128/178 (71%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A+ K V+VGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTA Sbjct: 15 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 74 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQEDYDRLRPLSYP TDV L+CFS+ +P S +N+ E+W PE+K + PNVP +L+G + DL Sbjct: 75 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 134 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 R+D T L MK++P+ E+G+ +A IGA Y+ECSA T+ G++ VF+ A A L Sbjct: 135 RDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 192 >2NTY-C nrPDB Length = 180 Score = 232 bits (591), Expect = 1e-61, Method: Composition-based stats. Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 3/182 (1%) Query: 1 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWD Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE++H+ P VPIILVG K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DLR+D+ + P+ +G ++ IG+ Y+ECS+KT+ V+ VF+ A + L Sbjct: 121 DLRDDKQF--FIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 Query: 180 QA 181 Q Sbjct: 179 QP 180 >3BWD-D nrPDB Length = 182 Score = 232 bits (591), Expect = 1e-61, Method: Composition-based stats. Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 3/182 (1%) Query: 1 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWD Sbjct: 3 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 62 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW PE+KH+ P VPI+LVG K Sbjct: 63 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 122 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DLR+D+ + P+ +G ++ IGA Y+ECS+K+++ V+ VF+ A R L Sbjct: 123 DLRDDKQF--FIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180 Query: 180 QA 181 Q Sbjct: 181 QP 182 >2WBL-C nrPDB Length = 180 Score = 231 bits (590), Expect = 1e-61, Method: Composition-based stats. Identities = 91/182 (50%), Positives = 122/182 (67%), Gaps = 3/182 (1%) Query: 1 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+ R K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWD Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 TAGQEDY+RLRPLSY DV L+ FS+ S S ENI +KW PE+KH+ P +PI+LVG K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DLR+D+ ++ + +G ++ IGA Y+ECS+KT+ V+ VF+ A R AL Sbjct: 121 DLRDDKQFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178 Query: 180 QA 181 + Sbjct: 179 RP 180 >3VHL-B nrPDB Length = 195 Score = 231 bits (590), Expect = 1e-61, Method: Composition-based stats. Identities = 97/185 (52%), Positives = 125/185 (67%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 K V+VGDGA GK CLLI ++ ++FP YVPTVF+NY + + G+ L L+DTA Sbjct: 7 GMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 66 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQEDYDRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DL Sbjct: 67 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 126 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 R+D T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ Sbjct: 127 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 186 Query: 182 RRGKK 186 KK Sbjct: 187 PEPKK 191 >5VCU-A nrPDB Length = 208 Score = 223 bits (569), Expect = 4e-59, Method: Composition-based stats. Identities = 98/178 (55%), Positives = 127/178 (71%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 K V+VGDGA GKT LLI +S FPE YVPTVF+NY +I V +AL+DTAGQE Sbjct: 11 SIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 DYDRLRPLSYPDTDV L+CFS+++P+SLEN KW E+KH+ P+ PI+LVG K DL+ D Sbjct: 71 DYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKD 130 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 E ++L + K PV E+G++M ++I A GY+ECSAKT + + E F MA A++ R Sbjct: 131 EEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 >4U5X-A nrPDB Length = 178 Score = 221 bits (564), Expect = 1e-58, Method: Composition-based stats. Identities = 83/175 (47%), Positives = 114/175 (65%), Gaps = 2/175 (1%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG V L LWDTAG ED Sbjct: 6 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLED 65 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 Y RLRPLSY DV ++ FS+ S S EN+ +KW PE++ F P VP++LVG K DLR D Sbjct: 66 YSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDR 125 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 + + E+G ++ IGA Y+ECS+KT+ ++ VF+ A + LQ Sbjct: 126 AYLAD--HPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >2Q3H-A nrPDB Length = 201 Score = 220 bits (560), Expect = 4e-58, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 121/180 (67%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GKT L++ ++ + +P Y+PT F+N+ A + VDG+ V L L DTAGQ+++ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEF 81 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 D+LRPL Y +TD+ L+CFS+ SP S +N+ EKW PE++ CP PIILVG + DLR D Sbjct: 82 DKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVK 141 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKK 186 EL K K++PV E + +A I A Y+ECSA T+ ++EVF+ A A +Q ++ Sbjct: 142 VLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQ 201 >4MIT-A nrPDB Length = 186 Score = 212 bits (541), Expect = 6e-56, Method: Composition-based stats. Identities = 89/178 (50%), Positives = 117/178 (65%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KLV+VGDGA GKTCLLI +S +FPE Y+PTVF+NYV + +Q++LALWDTAG Sbjct: 9 TSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 E+YD+LRPLSY + L+CFS+ S S +N+ KW PEV HF P VPIILVG K D RN Sbjct: 69 EEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRN 128 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 D + L + + +G ++ NRI A Y+ECSAKT + ++ VF+ A + L Sbjct: 129 DPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLMN 186 >1GWN-A nrPDB Length = 205 Score = 211 bits (538), Expect = 1e-55, Method: Composition-based stats. Identities = 91/179 (50%), Positives = 128/179 (71%), Gaps = 1/179 (0%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 27 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 86 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR Sbjct: 87 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 146 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDG-VREVFEMATRAALQA 181 D T EL+ +Q PV ++G +MA +IGA Y+ECSA + VR++F +AT A + Sbjct: 147 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 205 >1M7B-A nrPDB Length = 184 Score = 209 bits (533), Expect = 6e-55, Method: Composition-based stats. Identities = 91/179 (50%), Positives = 128/179 (71%), Gaps = 1/179 (0%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 6 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 65 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR Sbjct: 66 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 125 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDG-VREVFEMATRAALQA 181 D T EL+ +Q PV ++G +MA +IGA Y+ECSA + VR++F +AT A + Sbjct: 126 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 184 >2RHD-A nrPDB Length = 175 Score = 207 bits (527), Expect = 3e-54, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 16/178 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + + Y+ T+ ++ + I ++ K V+L +WDTAGQE Sbjct: 10 FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 69 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 + + Y I++ + + DS +N+ ++W E+ + NV +LVGNK DL Sbjct: 70 RFRTITSSYYRGAHGIIIVYDVTDRDSFDNV-KQWIQEIDRYAMENVNKLLVGNKCDL-- 126 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 + + V +EGR++A+ G ++E SAK V + F + Sbjct: 127 ----------VSKRVVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFHTMAGEIKKR 173 >5SZI-A nrPDB Length = 209 Score = 204 bits (519), Expect = 2e-53, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 15/185 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 11 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + + Y I++ + I + S +NI +H +V +++GNK D+ + Sbjct: 71 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND- 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 + V E G +A G +ME SAK V F R ++A+ Sbjct: 130 -----------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLAR-DIKAKMD 176 Query: 185 KKKSG 189 KK G Sbjct: 177 KKLEG 181 >5SZH-B nrPDB Length = 203 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 16/186 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 11 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 + + Y I++ + + +S N+ ++W E+ + NV +LVGNK DL Sbjct: 71 RFRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKLLVGNKSDLTT 129 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 ++ V ++ A+ +G ++E SAK V + F + Sbjct: 130 ------------KKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEIKKRMG 176 Query: 184 GKKKSG 189 SG Sbjct: 177 PGAASG 182 >4LHX-A nrPDB Length = 186 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 15/185 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 11 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + + Y I++ + I + S +NI +H +V +++GNK D+ + Sbjct: 71 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND- 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 + V E G +A G +ME SAK V F R ++A+ Sbjct: 130 -----------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLAR-DIKAKMD 176 Query: 185 KKKSG 189 KK G Sbjct: 177 KKLEG 181 >3L0I-B nrPDB Length = 199 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 17/181 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 34 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 93 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 + + Y I++ + + +S N+ ++W E+ + NV +LVGNK DL Sbjct: 94 RFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTT 152 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 ++ V ++ A+ +G ++E SAK V + F M A ++ R Sbjct: 153 ------------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSF-MTMAAEIKKRM 198 Query: 184 G 184 G Sbjct: 199 G 199 >3CPH-A nrPDB Length = 213 Score = 201 bits (512), Expect = 1e-52, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 91/184 (49%), Gaps = 15/184 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y I++ + + + NI + + +H ++LVGNK D+ Sbjct: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET-- 139 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGK 185 V ++G +A +G ++E SAK D V E+F + + Sbjct: 140 -----------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 187 Query: 186 KKSG 189 K G Sbjct: 188 KLVG 191 >2A5J-A nrPDB Length = 191 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 14/177 (7%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +I+GD GK+CLL+ F+ +F V+ T+ + + +DGKQ++L +WDTAGQE Sbjct: 22 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 81 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + + Y L+ + I ++ ++ +H N+ I+L+GNK DL + Sbjct: 82 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESR 141 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 VK EEG A G +ME SAKT V E F + + Sbjct: 142 ------------RDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIYRK 185 >1Z0A-A nrPDB Length = 174 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 14/177 (7%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +I+GD GK+CLL+ F+ +F V+ T+ + I +DGKQ++L +WDTAGQE Sbjct: 11 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + + Y L+ + I D+ ++ +H N+ I+L+GNK DL + Sbjct: 71 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 130 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 VK EEG A G +ME SAKT V E F + + Sbjct: 131 ------------REVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEK 174 >5FBL-B nrPDB Length = 221 Score = 200 bits (509), Expect = 4e-52, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 16/185 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F++++F T+ + I+VDGK ++ +WDTAGQE Sbjct: 17 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 76 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRN 123 Y + Y L+ + I + EN+ E+W E++ N+ I+LVGNK DLR+ Sbjct: 77 RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 135 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 V +E R A + G ++E SA V F+ + Sbjct: 136 ------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIYRIVS 182 Query: 184 GKKKS 188 K+ S Sbjct: 183 QKQMS 187 >4QXA-A nrPDB Length = 208 Score = 200 bits (508), Expect = 4e-52, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 20/188 (10%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAG E Sbjct: 9 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNKK 119 + LR Y +D L+ FS+D S +N+ W E ++ + P +++GNK Sbjct: 69 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKT 127 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 D++ + V EE + G + Y E SAK V FE A R L Sbjct: 128 DIK-------------ERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174 Query: 180 QARRGKKK 187 + Sbjct: 175 ATEDRSEH 182 >1Z0F-A nrPDB Length = 179 Score = 199 bits (507), Expect = 6e-52, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 14/177 (7%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +I+GD GK+CLL F++ +F T+ + IEV G++++L +WDTAGQE Sbjct: 16 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 75 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + + Y LM + I + ++ T PN IIL+GNK DL Sbjct: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE-- 133 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 Q V EE + A G ++E SAKT + V + F A + Q Sbjct: 134 ----------AQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKIYQN 179 >6IF2-B nrPDB Length = 186 Score = 199 bits (506), Expect = 7e-52, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 15/180 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+I+GD GK+ LL+ F+ + F Y+ T+ ++ + +E++G++V+L +WDTAG E Sbjct: 15 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLE 74 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + + Y T +++ + + S +S N+ ++W E+ C +V ILVGNK D Sbjct: 75 RFRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNKND---- 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 +++ V+ E+ A ++G E SAK V E+F T L+A++ Sbjct: 130 --------DPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKD 180 >2OCB-A nrPDB Length = 180 Score = 198 bits (505), Expect = 1e-51, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 87/183 (47%), Gaps = 20/183 (10%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTA 61 ++ K++++GDG GK+ L+ + ++F T+ ++ D+EVDG+ V L +WDTA Sbjct: 5 SLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTA 64 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVG 116 GQE + LR Y D L+ FS+D S EN+ W E ++ + P +++G Sbjct: 65 GQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFVVLG 123 Query: 117 NKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 NK D + V EE + G + Y+E SAK V FE A R Sbjct: 124 NKVDKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVR 170 Query: 177 AAL 179 L Sbjct: 171 QVL 173 >1WMS-A nrPDB Length = 177 Score = 198 bits (504), Expect = 1e-51, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 20/184 (10%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAGQE Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNKK 119 + LR Y +D L+ FS+D S +N+ W E ++ + P +++GNK Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKI 126 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 D+ + V EE + G + Y E SAK V FE A R L Sbjct: 127 DIS-------------ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 Query: 180 QARR 183 Sbjct: 174 ATED 177 >2OCY-C nrPDB Length = 170 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 15/176 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y I++ + + + NI + + +H ++LVGNK D+ Sbjct: 65 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMET-- 122 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 V ++G +A +G ++E SAK D V E+F + + Sbjct: 123 -----------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEK 166 >5SZJ-A nrPDB Length = 202 Score = 197 bits (502), Expect = 2e-51, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 + KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTA Sbjct: 9 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 68 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQE + + Y I++ + I + S ENI + +H +V +L+GNK D+ Sbjct: 69 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 128 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 + + V +G +A G + E SAK + + F L+ Sbjct: 129 DD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 175 Query: 182 RRGKKKSG 189 K+ + Sbjct: 176 TPVKEPNS 183 >6O62-A nrPDB Length = 184 Score = 197 bits (502), Expect = 2e-51, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 14/181 (7%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL++VGD GK+CLL+ F +D+F ++ T+ ++ + IE GK+++L +WDTAGQE Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQER 75 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + + Y I++ + + S EN+ + +H + I LVGNK D Sbjct: 76 FRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCD----- 130 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGK 185 V E+G+++A ++ ++E SAK+ + V +F + + Sbjct: 131 -------DEVNRQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYELASIIQEKHVEE 182 Query: 186 K 186 Sbjct: 183 N 183 >3CUE-F nrPDB Length = 206 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 92/185 (49%), Gaps = 16/185 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 9 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRN 123 + + Y + I++ + + +S + + W E+ + + + +LVGNK DL++ Sbjct: 69 RFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKD 127 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 + V+ + ++ A+ ++E SA V + F R ++ Sbjct: 128 ------------KRVVEYDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMARQIKESMS 174 Query: 184 GKKKS 188 + + Sbjct: 175 QQNLN 179 >2WWX-A nrPDB Length = 175 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 17/181 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 + + Y I++ + + +S N+ ++W E+ + NV +LVG K DL Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTT 127 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 ++ V ++ A+ +G ++E SAK V + F M A ++ R Sbjct: 128 ------------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSF-MTMAAEIKKRM 173 Query: 184 G 184 G Sbjct: 174 G 174 >1YZN-A nrPDB Length = 185 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 90/178 (50%), Gaps = 16/178 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 22 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 81 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRN 123 + + Y + I++ + + +S + + W E+ + + + +LVGNK DL++ Sbjct: 82 RFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKD 140 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 + V+ + ++ A+ ++E SA V + F R ++ Sbjct: 141 ------------KRVVEYDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMARQIKES 185 >4M8N-E nrPDB Length = 199 Score = 196 bits (499), Expect = 5e-51, Method: Composition-based stats. Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 15/176 (8%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 KLV++G G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTAG E Sbjct: 6 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTE 65 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLR 122 + +R L + + +SI + + ++ + + VK +VP+ILVGNK DL Sbjct: 66 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLE 124 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 ++ V E+G+++A + ++E SAK+K V E+F R Sbjct: 125 DE------------RVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >5LPN-A nrPDB Length = 177 Score = 196 bits (499), Expect = 5e-51, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 14/180 (7%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 + KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTA Sbjct: 9 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 68 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 121 GQE + + Y I++ + I + S ENI + +H +V +L+GNK D+ Sbjct: 69 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 128 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 + + V +G +A G + E SAK + + F L+ Sbjct: 129 DD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 175 >2F9L-A nrPDB Length = 199 Score = 196 bits (498), Expect = 6e-51, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 16/188 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWD 59 M K+V++GD GK+ LL F++++F T+ + I+VDGK ++ +WD Sbjct: 1 MYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNK 118 TAGQE Y R+ Y L+ + I + EN+ E+W E++ N+ I+LVGNK Sbjct: 61 TAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNK 119 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 DLR+ V +E R A + ++E SA V E F+ Sbjct: 120 SDLRH------------LRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEI 166 Query: 179 LQARRGKK 186 + K+ Sbjct: 167 YRIVSQKQ 174 >4G01-B nrPDB Length = 181 Score = 196 bits (498), Expect = 7e-51, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 16/177 (9%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFE-NYVADIEVDGKQVELALWDTA 61 +I KLV++GD GK+ L++ F KDQF E T+ + + V+ V+ +WDTA Sbjct: 10 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 69 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKD 120 GQE Y L P+ Y ++ F + + S E +KW E++ PN+ + L GNK D Sbjct: 70 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSD 128 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 L + V E+ + A G F +ME SAKT V+E+F R Sbjct: 129 LLD------------ARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARR 172 >1ZBD-A nrPDB Length = 203 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 16/183 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWD 59 M K++I+G+ + GKT L ++ D F +V TV ++ V I + K+++L +WD Sbjct: 4 MFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 63 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNK 118 TAG E Y + Y ++ + I + +S + + W+ ++K + N ++LVGNK Sbjct: 64 TAGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNK 122 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 D+ ++ V E GR +A+ +G F + E SAK V++ FE Sbjct: 123 CDMEDE------------RVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVI 169 Query: 179 LQA 181 + Sbjct: 170 CEK 172 >2GF9-A nrPDB Length = 189 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 16/182 (8%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 + KL+++G+ + GKT L ++ D F +V TV ++ V + K+++L +WDT Sbjct: 19 SDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDT 78 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKK 119 AGQE Y + Y L+ + I + +S + + W ++K + N +ILVGNK Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNKC 137 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DL ++ V E+GR +A+ +G F + E SAK V++VFE Sbjct: 138 DLEDE------------RVVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERLVDVIC 184 Query: 180 QA 181 + Sbjct: 185 EK 186 >2O52-A nrPDB Length = 200 Score = 195 bits (495), Expect = 1e-50, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 14/186 (7%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 + K +++G GK+CLL F +++F + T+ + + V GK V+L +WDT Sbjct: 22 SDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDT 81 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQE + + Y L+ + I S ++ ++ T PN+ +IL GNKKD Sbjct: 82 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKD 141 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 L + V E A ++E SA T + V E F R L Sbjct: 142 LDPE------------REVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTILN 188 Query: 181 ARRGKK 186 + Sbjct: 189 KIDSGE 194 >4RKE-A nrPDB Length = 176 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 14/177 (7%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +I+GD GK+CLL+ F+ +F V+ T+ + I +DGKQ++L +WDTAG E Sbjct: 11 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + + Y L+ + I ++ ++ +H N+ I+L+GNK DL + Sbjct: 71 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSR 130 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 VK EEG A G +ME SA+T V E F + + Sbjct: 131 ------------REVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINTAKEIYEK 174 >1X3S-A nrPDB Length = 195 Score = 194 bits (493), Expect = 3e-50, Method: Composition-based stats. Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 18/182 (9%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAG 62 K++I+G+ GK+ LL+ F+ D F T+ ++ V I VDG + +LA+WDTAG Sbjct: 14 TTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 73 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC--PNVPIILVGNKKD 120 QE + L P Y +++ + + D+ + + W E++ +C ++ +LVGNK D Sbjct: 74 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKID 132 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 N V EG A + + ++E SAKT DGV+ FE +Q Sbjct: 133 KEN-------------REVDRNEGLKFARKH-SMLFIEASAKTCDGVQCAFEELVEKIIQ 178 Query: 181 AR 182 Sbjct: 179 TP 180 >5LDD-C nrPDB Length = 207 Score = 194 bits (493), Expect = 3e-50, Method: Composition-based stats. Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++I+GD GKT L+ + +F Y T+ +++ ++ VD +QV + LWDTAGQE Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNKK 119 + L Y D ++ F +++ S + + + W E N P +++G K Sbjct: 71 RFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGIKI 129 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 D+ + + + + G Y E SAK V E F++ R AL Sbjct: 130 DVEE-----------SKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNAL 178 Query: 180 QARRGKKKSG 189 ++ SG Sbjct: 179 MQEESEEFSG 188 >4UJ4-A nrPDB Length = 185 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 16/185 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F++++F T+ + I+VDGK ++ +WDTAG E Sbjct: 11 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRN 123 Y + Y L+ + I + EN+ E+W E++ N+ I+LVGNK DLR+ Sbjct: 71 RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 129 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 V +E R A + G ++E SA V F+ + Sbjct: 130 ------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEIYRIVS 176 Query: 184 GKKKS 188 K+ S Sbjct: 177 QKQMS 181 >3CPJ-B nrPDB Length = 223 Score = 193 bits (490), Expect = 6e-50, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 16/186 (8%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 + K+V++GD GK+ LL F+K++F T+ + +E++GK+++ +WDTA Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTA 70 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 120 GQE Y + Y L+ + I S EN W E++ NV + L+GNK D Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLSELRENADDNVAVGLIGNKSD 129 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 L + V EE + A + E SA + V + FE Q Sbjct: 130 LAH------------LRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTIYQ 176 Query: 181 ARRGKK 186 + Sbjct: 177 KVSKHQ 182 >4DXA-A nrPDB Length = 169 Score = 192 bits (489), Expect = 8e-50, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 15/179 (8%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + KLV++G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTA Sbjct: 2 SMREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTA 61 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKK 119 G E + +R L + + +SI + + ++ + + VK +VP+ILVGNK Sbjct: 62 GTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKC 120 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 DL ++ V E+G+++A + ++E SAK+K V E+F R Sbjct: 121 DLEDE------------RVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >3RAB-A nrPDB Length = 169 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 16/181 (8%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 K++I+G+ + GKT L ++ D F +V TV ++ V I + K+++L +WDTA Sbjct: 3 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 62 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 120 GQE Y + Y ++ + I + +S + + W+ ++K + N ++LVGNK D Sbjct: 63 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCD 121 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 + ++ V E GR +A+ +G F + E SAK V++ FE + Sbjct: 122 MEDE------------RVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVICE 168 Query: 181 A 181 Sbjct: 169 K 169 >2HEI-A nrPDB Length = 179 Score = 191 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 16/175 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQ 63 + KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQ Sbjct: 8 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 67 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLR 122 E Y L P+ Y ++ + I + ++ + W E++ P++ I L GNK DL Sbjct: 68 ERYHSLAPMYYRGAQAAIVVYDITNQETFARA-KTWVKELQRQASPSIVIALAGNKADLA 126 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 N + V+ EE + A+ + +ME SAKT V ++F + Sbjct: 127 N------------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLFLAIAKK 168 >4RKF-A nrPDB Length = 190 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 KL+I+G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTA Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 80 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 120 G E Y + Y ++ + + + DS ++ + W ++K + N +ILVGNK D Sbjct: 81 GLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCD 139 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 + + Q + E GR +A+++G + E SAK V+ VFE Sbjct: 140 MED------------QRVISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLVDII 184 >1TU4-A nrPDB Length = 171 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 16/175 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQ 63 + KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQ Sbjct: 7 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 66 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLR 122 E Y L P+ Y ++ + I + +S + W E++ PN+ I L GNK DL Sbjct: 67 ERYHSLAPMYYRGAQAAIVVYDITNEESFARA-KNWVKELQRQASPNIVIALSGNKADLA 125 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 N + V +E + A+ + +ME SAKT V E+F + Sbjct: 126 N------------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKK 167 >3DZ8-A nrPDB Length = 191 Score = 190 bits (483), Expect = 4e-49, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 16/178 (8%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 KL+I+G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTA Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTA 80 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 120 GQE Y + Y ++ + I + +S + + W ++K + N +ILVGNK D Sbjct: 81 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQVILVGNKCD 139 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 + + V E+G+ +A ++G F + E SAK VR+ FE A Sbjct: 140 MEEE------------RVVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFERLVDAI 184 >5UB8-A nrPDB Length = 222 Score = 190 bits (483), Expect = 4e-49, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 24/193 (12%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F++D+F T+ + +E+DGK+V+ +WDTAGQE Sbjct: 16 YKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQE 75 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRN 123 Y + Y L+ + I +S E++ +W E+K N+ I LVGNK DL + Sbjct: 76 RYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDLDH 134 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF--------EMAT 175 V EE ++ A + E SA + D V F EM + Sbjct: 135 ------------LRAVPTEEAKNFAMENNLL-FTEASALSSDNVDLSFHQLLKNIYEMIS 181 Query: 176 RAALQARRGKKKS 188 + L+ K+ + Sbjct: 182 KHQLENNDSKQTN 194 >2BMD-A nrPDB Length = 186 Score = 190 bits (482), Expect = 4e-49, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 16/183 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +++G+ GK+CLL F + +F + T+ + I V GK V+L +WDTAGQE Sbjct: 11 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH-FCPNVPIILVGNKKDLRN 123 + + Y L+ + I S ++ N W + + N+ IIL GNKKDL Sbjct: 71 RFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDA 129 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 D V E A ++E SA T + V E F R L Sbjct: 130 D------------REVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILNKIE 176 Query: 184 GKK 186 + Sbjct: 177 SGE 179 >4KLZ-A nrPDB Length = 173 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 14/183 (7%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++ KLV++G G GK+ + + F +FPE + PT+ + Y I +D + L + DTA Sbjct: 2 SSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTA 61 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGNKKD 120 GQ ++ +R + ++C+SI S + E K + P++LVGNK D Sbjct: 62 GQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSD 121 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 L+ + V EEG +A + + E SA + + +VF R + Sbjct: 122 LK------------QLRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREIRR 168 Query: 181 ARR 183 + Sbjct: 169 KEK 171 >5XR6-A nrPDB Length = 194 Score = 189 bits (481), Expect = 5e-49, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 16/180 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWD 59 M KLV++GD GK+ LL F+K++F T+ + +V+GK V+ +WD Sbjct: 21 MYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWD 80 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNK 118 TAGQE Y + Y L+ + + + EN +W E++ H PN+ ++L+GNK Sbjct: 81 TAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNK 139 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 DLR+ VK EE + A R + +ME SA V F Sbjct: 140 CDLRH------------LVAVKTEEAKAFAERESLY-FMETSALDATNVENAFTEVLTQI 186 >2REX-B nrPDB Length = 197 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 80/179 (44%), Positives = 117/179 (65%), Gaps = 1/179 (0%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 R KLV+VGD CGKT +L V +KD +PE YVPTVFENY A +E + ++VEL+LWDT+G Sbjct: 10 RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSP 69 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 YD +RPL Y D+D +L+CF I P+++++ +KW E+ +CP+ ++L+G K DLR D Sbjct: 70 YYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTD 129 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKD-GVREVFEMATRAALQAR 182 T EL+ KQ P+ E+G +A ++GA Y+E SA T + + +F A+ L Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKP 188 >2HUP-A nrPDB Length = 201 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 15/178 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KLV+VGD + GKTC++ F F E T+ ++ + +E+ GK+V+L +WDTAGQE Sbjct: 30 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 89 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 + + Y + ++ + I S ++P W +V+ + N+ +L+GNK DL Sbjct: 90 RFRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSDLSE 148 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 V E + +A +E SAK V E F + Sbjct: 149 ------------LREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR 194 >2IL1-A nrPDB Length = 192 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 15/182 (8%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 A + +++I+G GKT L+ F+ D F E TV ++ + +E+ GK++ L +WDT Sbjct: 23 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDT 82 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKK 119 AGQE ++ + Y I++ + I ++ +++P KW + K+ + ++LVGNK Sbjct: 83 AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLVGNKL 141 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 D D + ++G A +I + E SAK V E+F L Sbjct: 142 DCETD------------REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL 189 Query: 180 QA 181 + Sbjct: 190 KK 191 >4PHF-A nrPDB Length = 184 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 19/186 (10%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQV-ELALWDTAGQ 63 K++I+GD GKT L+ + D++ Y T+ +++ ++ VDG +V + +WDTAGQ Sbjct: 11 LKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 70 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNK 118 E + L Y D ++ + + + S ENI + W E P +++GNK Sbjct: 71 ERFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPETFPFVILGNK 129 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 D A+ ++ V + +++A +G SAK V FE R+A Sbjct: 130 ID-----------AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 178 Query: 179 LQARRG 184 LQ + Sbjct: 179 LQQNQA 184 >1EK0-A nrPDB Length = 170 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 13/177 (7%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAG 62 KLV++G+ A GK+ +++ F + F E PT+ ++ + ++ V+ +WDTAG Sbjct: 2 TSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAG 61 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDL 121 QE + L P+ Y + L+ + + P S W E+ ++ I LVGNK D+ Sbjct: 62 QERFASLAPMYYRNAQAALVVYDVTKPQSFIKARH-WVKELHEQASKDIIIALVGNKIDM 120 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 L + + V EEG +A G + E SAKT + V +VF Sbjct: 121 ---------LQEGGERKVAREEGEKLAEEKGLL-FFETSAKTGENVNDVFLGIGEKI 167 >2FG5-A nrPDB Length = 192 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 17/180 (9%) Query: 2 AAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWD 59 +AIR K+ ++GD GK+ ++ F +D F PT+ +++ + + + +WD Sbjct: 19 SAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWD 78 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNK 118 TAGQE + L P+ Y + ++ + I DS + +KW E+K P N+ + + GNK Sbjct: 79 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNK 137 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 DL + V ++ ++ A IGA +E SAK + E+F+ +R Sbjct: 138 CDLSD------------IREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQGISRQI 184 >2EW1-A nrPDB Length = 201 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 17/182 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++G+ GKTCL+ F++ FP T+ ++ + +E++G++V+L +WDTAGQE Sbjct: 27 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 86 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRN 123 + + Y + +++ + I +S +PE W E++ + N V +LVGNK DL Sbjct: 87 RFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKIDL-- 143 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF-EMATRAALQAR 182 RRE+++ + E + Y+E SAK D V ++F ++A R +AR Sbjct: 144 --AERREVSQQRAEEFSEAQ---------DMYYLETSAKESDNVEKLFLDLACRLISEAR 192 Query: 183 RG 184 + Sbjct: 193 QN 194 >4KYI-B nrPDB Length = 170 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 16/175 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQ 63 + KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAG Sbjct: 9 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLR 122 E Y L P+ Y ++ + I + D+ + W E++ PN+ I L GNK DL Sbjct: 69 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARA-KNWVKELQRQASPNIVIALAGNKADL- 126 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 + V+ +E + A+ + +ME SAKT V E+F + Sbjct: 127 -----------ASKRAVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKK 169 >2G6B-A nrPDB Length = 180 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 17/185 (9%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPE-VYVPTVFENYV-ADIEVDGKQVELALWDT 60 + K+++VGD GKTCLL+ F F ++ TV ++ ++VDG +V+L +WDT Sbjct: 8 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDT 67 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKK 119 AGQE + + Y D +L+ + + + S +NI + W E+ + +V ++L+GNK Sbjct: 68 AGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKV 126 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 D + VK E+G +A G +ME SAKT V F + Sbjct: 127 D------------SAHERVVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKELK 173 Query: 180 QARRG 184 + Sbjct: 174 RRSMK 178 >5YOZ-A nrPDB Length = 177 Score = 186 bits (472), Expect = 6e-48, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 15/173 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWD 59 M A K+V++G+ GK+ + + F++++F T+ ++ + +DG+ ++ +WD Sbjct: 11 MEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWD 70 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNK 118 TAG E + L P+ Y L+ + I + +SL+ + W E++ P++ I+LVGNK Sbjct: 71 TAGLERFRSLAPIYYRGASGALVVYDITNSESLKKA-QTWIKELRANADPSLIIVLVGNK 129 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 171 KDL + V E+G+ +A + E SAK + V +VF Sbjct: 130 KDLGS------------LRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVF 170 >2F7S-A nrPDB Length = 217 Score = 185 bits (471), Expect = 8e-48, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 27/189 (14%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ-----------VE 54 KL+ +GD GKT L ++ ++F ++ TV ++ V Q V Sbjct: 26 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 85 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPI 112 L LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I Sbjct: 86 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDI 144 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 +L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 145 VLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVE 191 Query: 173 MATRAALQA 181 ++ Sbjct: 192 TLLDLIMKR 200 >5CM8-B nrPDB Length = 203 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 16/184 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F D+F E Y PT ++Y + +DG++V++ + DTAGQEDY Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R + + L FSI +S + E + VK ++P +LVGNK DL + Sbjct: 75 AAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVK-NDESIPFLLVGNKCDLND- 132 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 + V E + A + A Y+E SAKT++ V +VF R + Sbjct: 133 -----------KRKVPLSECQLRAQQW-AVPYVETSAKTRENVDKVFFDLMREIRSRKTE 180 Query: 185 KKKS 188 K+ Sbjct: 181 DSKA 184 >2KE5-A nrPDB Length = 174 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 15/183 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F D+F E Y PT ++Y + +DG++V++ + DTAG EDY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R + + L+ FSI +S E + VK +P+++VGNK DL Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEER 124 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 V EE R A G Y+E SAKT+ V +VF R + Sbjct: 125 ------------RQVPVEEARSKAEEWG-VQYVETSAKTRANVDKVFFDLMREIRTKKMS 171 Query: 185 KKK 187 + K Sbjct: 172 ENK 174 >3BFK-A nrPDB Length = 181 Score = 183 bits (466), Expect = 3e-47, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 17/184 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEV-DGKQVELALWDTAGQ 63 K+V++GD GK+ LL F++D+F T+ + I++ + K ++ +WDTAGQ Sbjct: 8 FKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQ 67 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLR 122 E Y + Y L+ + I +S ENI EKW E++ N+ I+LVGNK DL+ Sbjct: 68 ERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLK 126 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 + + + A + ++E SA V F R Sbjct: 127 H------------LRVINDNDATQYAKKEK-LAFIETSALEATNVELAFHQLLNEIYNVR 173 Query: 183 RGKK 186 + K+ Sbjct: 174 QKKQ 177 >1D5C-A nrPDB Length = 162 Score = 183 bits (466), Expect = 3e-47, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 14/172 (8%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ A GKT ++ F D F Y T+ +++ + +D V L LWDTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 E + L P D+ ++ + I + S EN + + +V I LVGNK DL + Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 120 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 V EEG A + E SAK ++ +F+ Sbjct: 121 ------------LRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKKTA 159 >3REG-A nrPDB Length = 194 Score = 183 bits (466), Expect = 3e-47, Method: Composition-based stats. Identities = 80/177 (45%), Positives = 111/177 (62%), Gaps = 10/177 (5%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+V+VGDGA GKTCLL+ FSK + P YVPTVFEN+ ++ ++ L LWDTAGQE+ Sbjct: 24 LKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQEE 83 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 YDRLRPLSY D+DV+L+CF++++ S +NI KW PE+KH+ +LVG K DLR D Sbjct: 84 YDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRKD- 142 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 + V +EG D+ ++G Y+E S+ K G+ EVFE + + Sbjct: 143 ---------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNK 190 >6IYB-A nrPDB Length = 199 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 21/183 (11%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++I+GD GKT L+ + +F Y T+ +++ ++ VD + V + +WDTAG E Sbjct: 14 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLE 73 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----PNVPIILVGNKK 119 + Y D ++ F + +P++ + + + W E N P +++GNK Sbjct: 74 RFQS-GVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 131 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DL N V + + Y E SAK V + F+ R AL Sbjct: 132 DLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 178 Query: 180 QAR 182 + Sbjct: 179 KQE 181 >3RWM-B nrPDB Length = 185 Score = 183 bits (464), Expect = 6e-47, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 16/177 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F+ D+F T+ + IEV+ K+++ +WDTAG E Sbjct: 11 FKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 Y + Y L+ + I S EN W E++ NV + L+GNK DL + Sbjct: 71 RYRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLTELRENADDNVAVGLIGNKSDLAH 129 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 V +E ++ A + E SA D V + F A Q Sbjct: 130 ------------LRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRELIVAIFQ 173 >1YVD-A nrPDB Length = 169 Score = 181 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 16/176 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 K+ ++GD GK+ ++ F +D F PT+ +++ ++ + + +WDTAGQ Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 122 E + L P+ Y + ++ + I ++ + + W E++ H P++ + + GNK DL Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTL-KNWVRELRQHGPPSIVVAIAGNKCDLT 123 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 + V + +D A+ I A ++E SAK + E+F +R Sbjct: 124 DV------------REVMERDAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166 >6HUF-A nrPDB Length = 182 Score = 181 bits (460), Expect = 1e-46, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 17/179 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K + +GD GKT +L ++ +F ++ TV ++ I + K+++L LWDTAG E Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLE 69 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPIILVGNKKDLR 122 + L + D L+ F + + +S N+ W ++K + N I+L GNK DL Sbjct: 70 RFRSLTTAFFRDAMGFLLLFDLTNEESFLNV-RNWISQLKTHAYSENPDIVLCGNKSDLE 128 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 ++ V E R +A G Y E SA + + EM ++ Sbjct: 129 DE------------RVVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEMLLDLIMKR 174 >2FFQ-A nrPDB Length = 171 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 16/178 (8%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ + GKT L+ F D F Y T+ +++ + ++ + V L LWDTAGQ Sbjct: 2 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 122 E + L P D+ V ++ + I + +S + KW +V+ +V I+LVGNK DL Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTS-KWIDDVRTERGSDVIIMLVGNKTDLA 120 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 + + + EEG A + + ++E SAKT V+++F A L+ Sbjct: 121 D------------KRQITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALLE 165 >3BC1-A nrPDB Length = 195 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 27/189 (14%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV-----------DGKQVE 54 K + +GD GKT +L ++ +F ++ TV ++ V G+++ Sbjct: 12 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIH 71 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPI 112 L LWDTAG E + L + D L+ F + + S N+ W +++ + N I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYSENPDI 130 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 +L GNK DL + Q VK EE R++A + G Y E SA + E Sbjct: 131 VLCGNKSDLED------------QRAVKEEEARELAEKYG-IPYFETSAANGTNISHAIE 177 Query: 173 MATRAALQA 181 M ++ Sbjct: 178 MLLDLIMKR 186 >2IEZ-A nrPDB Length = 220 Score = 180 bits (457), Expect = 4e-46, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 27/189 (14%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGK----------QVE 54 KL+ +GD GKT L ++ ++F ++ TV ++ + D + +V Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPI 112 L LWDTAG E + L + D L+ F + S S N+ W +++ +C N I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDI 130 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 +L+GNK DL + Q V + R++A + G Y E SA T V + E Sbjct: 131 VLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 Query: 173 MATRAALQA 181 ++ Sbjct: 178 TLLDLIMKR 186 >1ZC4-A nrPDB Length = 175 Score = 180 bits (457), Expect = 4e-46, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 16/179 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F D+F E Y PT ++Y + +DG++V++ + DTAG EDY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRND 124 +R + + L FSI +S + + VK NVP +LVGNK DL + Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLED- 125 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 + V EE ++ A + Y+E SAKT+ V +VF R + Sbjct: 126 -----------KRQVSVEEAKNRAEQWN-VNYVETSAKTRANVDKVFFDLMREIRARKM 172 >3CON-A nrPDB Length = 190 Score = 180 bits (456), Expect = 4e-46, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 17/170 (10%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 78 DVILMCFSIDSPDSLE--NIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L F+I++ S N+ + VK +VP++LVGNK DL Sbjct: 94 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 140 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGK 185 V ++ ++A G ++E SAKT+ GV + F R Q R K Sbjct: 141 -RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQYRMKK 188 >2IEY-A nrPDB Length = 195 Score = 179 bits (455), Expect = 6e-46, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 27/189 (14%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGK----------QVE 54 KL+ +GD GKT L ++ ++F ++ TV ++ + D + +V Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPI 112 L LWDTAG E + L + D L+ F + S S N+ W +++ +C N I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDI 130 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 +L+GNK DL + Q V + R++A + G Y E SA T V + E Sbjct: 131 VLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 Query: 173 MATRAALQA 181 ++ Sbjct: 178 TLLDLIMKR 186 >3TSO-A nrPDB Length = 178 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 16/176 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++G+ GKT LL F++++F T+ + + + V+ +WDTAG E Sbjct: 11 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRN 123 Y + Y L+ F + + + E+W E+ + ++LVGNK DL Sbjct: 71 RYRAITSAYYRGAVGALLVFDLTKHQTY-AVVERWLKELYDHAEATIVVMLVGNKSDLS- 128 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + V EE R A G ++E SA V FE + Sbjct: 129 -----------QAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFETVLKEIF 172 >1YZU-A nrPDB Length = 170 Score = 178 bits (452), Expect = 1e-45, Method: Composition-based stats. Identities = 52/181 (28%), Positives = 96/181 (53%), Gaps = 16/181 (8%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTA 61 A K+V++G+G GKT L++ + +++F + ++ T+ +++ + + GK+V LA+WDTA Sbjct: 4 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 63 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 120 GQE + L P+ Y D++ ++ + I DS + + + W E++ N + + +VGNK D Sbjct: 64 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKV-KNWVKELRKMLGNEICLCIVGNKID 122 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 L + H V +E A +GA Y SAK G+ E+F + ++ Sbjct: 123 LEKERH------------VSIQEAESYAESVGAKHYH-TSAKQNKGIEELFLDLCKRMIE 169 Query: 181 A 181 Sbjct: 170 T 170 >2G77-B nrPDB Length = 198 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 21/177 (11%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++++GD GKTCL F +FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 30 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 89 Query: 65 DYD-RLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDL 121 + + Y + ++ + + + S ++P W E K ++P ILVGNK DL Sbjct: 90 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP-AWIEECKQHLLANDIPRILVGNKCDL 148 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAK---TKDGVREVFEMAT 175 R+ V + + A+ + E SAK D V +F Sbjct: 149 RSAIQ------------VPTDLAQKFADTH-SMPLFETSAKNPNDNDHVEAIFMTLA 192 >2ERX-A nrPDB Length = 172 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 17/180 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 ++ + G G GK+ L++ F K F E Y+PTV + Y I D L + DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 63 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRN 123 + ++ LS ++ +SI S SLE + + E+K ++PI+LVGNK D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD--- 120 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 + V+ E +A +ME SAK V+E+F+ L+ RR Sbjct: 121 ---------ESPSREVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQEL--LNLEKRR 168 >1Z06-A nrPDB Length = 189 Score = 176 bits (448), Expect = 3e-45, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 21/177 (11%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++++GD GKTCL F +FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 21 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 80 Query: 65 DYD-RLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDL 121 + + Y + ++ + + + S ++P W E K ++P ILVGNK DL Sbjct: 81 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP-AWIEECKQHLLANDIPRILVGNKCDL 139 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAK---TKDGVREVFEMAT 175 R+ V + + A+ + E SAK D V +F Sbjct: 140 RSAIQ------------VPTDLAQKFADTH-SMPLFETSAKNPNDNDHVEAIFMTLA 183 >2GIL-A nrPDB Length = 162 Score = 176 bits (448), Expect = 3e-45, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 16/173 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ + GKT L+ F D F Y T+ +++ + ++ + V L LWDTAGQ Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 122 E + L P D+ V ++ + I + +S + KW +V+ +V I+LVGNK DL Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIMLVGNKTDLA 119 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 + + V EEG A + ++E SAK V+++F Sbjct: 120 D------------KRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVA 159 >5LEF-A nrPDB Length = 191 Score = 176 bits (448), Expect = 4e-45, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 16/186 (8%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ + GKT L+ F D F Y T+ +++ + ++ + V L LWDTAG Sbjct: 9 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 122 E + L P D+ V ++ + I + +S + KW +V+ +V I+LVGNK DL Sbjct: 69 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIMLVGNKTDLA 127 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 + + V EEG A + ++E SAK V+++F A Sbjct: 128 D------------KRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAALPGME 174 Query: 183 RGKKKS 188 + +S Sbjct: 175 STQDRS 180 >4KU4-A nrPDB Length = 206 Score = 175 bits (445), Expect = 9e-45, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 32/201 (15%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 I K+ ++G+G GKT L + +K F E Y PT+ ++Y +DG L + DTA Sbjct: 11 GKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTA 70 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--------------HFC 107 GQE+Y LR ++ ++ F + S E + ++ Sbjct: 71 GQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPGDRHP 130 Query: 108 PNVP-----IILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAK 162 ++P ++LVGNK DL V EG +A ++G G++E SAK Sbjct: 131 DDLPFAPSLVVLVGNKCDLDTR------------REVGTLEGSSLAKKLG-CGFVETSAK 177 Query: 163 TKDGVREVFEMATRAALQARR 183 V E F RA + +R Sbjct: 178 LGTNVEEAFFSVVRADRRRKR 198 >5WDQ-A nrPDB Length = 170 Score = 175 bits (444), Expect = 1e-44, Method: Composition-based stats. Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 17/165 (10%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L F+I++ S E+I ++ ++K +VP++LVGNK D Sbjct: 80 EGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKCD-------------AA 125 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 V+ + +D+A G Y+E SAKT+ GV + F R Q Sbjct: 126 ARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVREIRQ 169 >2P5S-A nrPDB Length = 199 Score = 175 bits (444), Expect = 1e-44, Method: Composition-based stats. Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 10/178 (5%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V+ GD A GK+ L+ K++F E T+ ++ + + VDG++ L LWDTAGQE Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQE 88 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 + + + D +L+ + + S NI E W ++ VPI+LVGNK D+R+ Sbjct: 89 RFRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADIRD 147 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 T Q+ V G +A GA + E SAK + E R + Sbjct: 148 TAATE------GQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREVKKR 198 >5UHV-A nrPDB Length = 166 Score = 174 bits (442), Expect = 2e-44, Method: Composition-based stats. Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 17/165 (10%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 78 DVILMCFSIDSPDSLE--NIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + L F+I++ S N+ + VK +VP++LVGNK DL Sbjct: 76 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 122 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 V ++ ++A G ++E SAKT+ GV + F R Q Sbjct: 123 -RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 165 >1Z22-A nrPDB Length = 168 Score = 174 bits (441), Expect = 3e-44, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 15/181 (8%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDT 60 + + K+V+VG+GA GK+ ++ + K F + Y T+ +++ I+V+ + V L LWDT Sbjct: 2 SEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDT 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AGQE++D + Y ++ FS +S E I W +V ++P LV NK D Sbjct: 62 AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVVAEVGDIPTALVQNKID 120 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 L +D +K EE +A R+ + S K V EVF+ LQ Sbjct: 121 LLDD------------SCIKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHLQ 167 Query: 181 A 181 Sbjct: 168 K 168 >4WA7-A nrPDB Length = 170 Score = 173 bits (440), Expect = 4e-44, Method: Composition-based stats. Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 17/185 (9%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 KLV+VG G GK+ L I ++ F + Y PT+ ++Y + +DG+ L + DTA Sbjct: 1 GMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTA 60 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKK 119 G E+Y +R + L F+I++ S E+I + ++K +VP++LVGNK Sbjct: 61 GLEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHH-YREQIKRVKDSEDVPMVLVGNKC 119 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DL V ++ +D+A G ++E SAKT+ GV + F R Sbjct: 120 DLP-------------SRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREIR 165 Query: 180 QARRG 184 + + Sbjct: 166 KHKEK 170 >5HZH-A nrPDB Length = 332 Score = 173 bits (438), Expect = 5e-44, Method: Composition-based stats. Identities = 77/140 (55%), Positives = 95/140 (67%) Query: 40 ENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW 99 + ++ GK V L LWDTAG EDYDRLRPLSYP TDV L+CFS+ SP S EN+ KW Sbjct: 190 DEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKW 249 Query: 100 TPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMEC 159 PEV+H CPN PIILVG K DLR+D+ T +L + K P+ +G MA IGA Y+EC Sbjct: 250 YPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 309 Query: 160 SAKTKDGVREVFEMATRAAL 179 SA T+ G++ VF+ A RA L Sbjct: 310 SALTQRGLKTVFDEAIRAVL 329 Score = 71.8 bits (175), Expect = 2e-13, Method: Composition-based stats. Identities = 27/49 (55%), Positives = 36/49 (73%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG 50 + K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG Sbjct: 3 SMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >2FN4-A nrPDB Length = 181 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 14/169 (8%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y VDG L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDEHTRRELAKMKQ 136 L+ F+I+ S + + +T ++ + P++LVGNK DL + Q Sbjct: 82 HGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLES------------Q 129 Query: 137 EPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGK 185 V E Y E SAK + V E FE RA + + + Sbjct: 130 RQVPRSEASAFGASHH-VAYFEASAKLRLNVDEAFEQLVRAVRKYQEQE 177 >5WDR-A nrPDB Length = 171 Score = 170 bits (432), Expect = 3e-43, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 83/182 (45%), Gaps = 16/182 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MA +LV+VG G GK+ L I + F Y PT+ ++Y + +D + L + DT Sbjct: 3 MAMTEYRLVVVGTGGVGKSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDT 62 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNK 118 AGQEDY +R + L +SIDS SL+ I + VK VP+ILVGNK Sbjct: 63 AGQEDYSAMRDQYMRTGEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDE-VPMILVGNK 121 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 DL V E G+ +A + +ME SAK + V E F R Sbjct: 122 CDLEEH------------REVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVREI 168 Query: 179 LQ 180 + Sbjct: 169 RK 170 >2ERY-A nrPDB Length = 172 Score = 170 bits (431), Expect = 4e-43, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 14/164 (8%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y +D + L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 78 DVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDEHTRRELAKMKQ 136 + L+ FS+ S E I + ++ P+IL+GNK DL + Q Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDH------------Q 125 Query: 137 EPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 V EEG+ +A ++ YME SAK + V + F R + Sbjct: 126 RQVTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVIRK 168 >4FMC-F nrPDB Length = 117 Score = 169 bits (430), Expect = 5e-43, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 3/116 (2%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDY 66 L+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDL 121 + Y I++ + + +S N+ ++W E+ + NV +LVGNK DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDL 115 >2ATV-A nrPDB Length = 196 Score = 168 bits (427), Expect = 1e-42, Method: Composition-based stats. Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 18/184 (9%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 + KL I G GK+ L++ F +F Y PT+ Y +D + V + + DTAG Sbjct: 26 SAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAG 85 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENI--PEKWTPEVKHFCPNVPIILVGNKKD 120 QED R + ++ + I S E + + E+K NV +ILVGNK D Sbjct: 86 QED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK-PKNVTLILVGNKAD 143 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKD-GVREVFEMATRAAL 179 L + V EEG +A + A + ECSA T + + E+F R Sbjct: 144 LDH------------SRQVSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYELCREVR 190 Query: 180 QARR 183 + R Sbjct: 191 RRRM 194 >3CBQ-A nrPDB Length = 195 Score = 165 bits (419), Expect = 9e-42, Method: Composition-based stats. Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 19/187 (10%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVP-TVFENYVADIEVDGKQVELALWDTAGQE 64 K+++VG+ GK+ L F Q + P + Y I VD ++V L ++D Q Sbjct: 24 FKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQG 83 Query: 65 D-YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP--NVPIILVGNKKDL 121 D LR D L+ FS+ S +PE ++ P ++P+ILVGNK DL Sbjct: 84 DAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPET-LLRLRAGRPHHDLPVILVGNKSDL 142 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 + V EEGR +A + + ++E SA RE+FE A R + Sbjct: 143 ------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQI-RL 188 Query: 182 RRGKKKS 188 RRG+ + Sbjct: 189 RRGRNHA 195 >2G3Y-A nrPDB Length = 211 Score = 164 bits (416), Expect = 2e-41, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 21/189 (11%) Query: 6 KKLVIVGDGACGKTCLLIVF--SKDQFPEVYVPTVFENYVADIEVDGKQ---VELALWDT 60 ++V++G+ GK+ L +F D + Y + VDG+ + L +W+ Sbjct: 38 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 97 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGNKK 119 G+ ++ L D L+ +SI S E E + ++PIILVGNK Sbjct: 98 KGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 155 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DL ++ V EGR A + ++E SA + V+E+FE R Sbjct: 156 DL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELFEGIVRQVR 202 Query: 180 QARRGKKKS 188 R K+K+ Sbjct: 203 LRRDSKEKN 211 >2CJW-A nrPDB Length = 192 Score = 164 bits (416), Expect = 2e-41, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 21/193 (10%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVF--SKDQFPEVYVPTVFENYVADIEVDGKQ---VELA 56 ++V++G+ GK+ L +F D + Y + VDG+ + L Sbjct: 3 GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILV 115 +W+ G+ ++ L D L+ +SI S E E + ++PIILV Sbjct: 63 MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 116 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 GNK DL ++ V EGR A + ++E SA + V+E+FE Sbjct: 121 GNKSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELFEGIV 167 Query: 176 RAALQARRGKKKS 188 R R K+K+ Sbjct: 168 RQVRLRRDSKEKN 180 >3PIR-A nrPDB Length = 183 Score = 163 bits (413), Expect = 4e-41, Method: Composition-based stats. Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 17/168 (10%) Query: 17 GKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPD 76 GK+ L I F + F Y PT+ ++Y+ E+D + L + DTAGQE++ +R Sbjct: 30 GKSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRT 89 Query: 77 TDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKM 134 D L+ +S+ S E++ + VK + P+ILV NK DL M Sbjct: 90 GDGFLIVYSVTDKASFEHVDRFHQLILRVKD-RESFPMILVANKVDL------------M 136 Query: 135 KQEPVKPEEGRDMANRIGAFGYMECSAKT-KDGVREVFEMATRAALQA 181 V ++G++MA + Y+E SAK V + F R Q Sbjct: 137 HLRKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >2GF0-A nrPDB Length = 199 Score = 163 bits (412), Expect = 6e-41, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 20/178 (11%) Query: 18 KTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L++ F K F + Y+PT+ + Y I D L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 78 DVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 ++ FS+ S SLE + K ++K ++P++LVGNK D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA----TRAALQARRGKKKSG 189 Q V E + +A +ME SAK V+E+F+ TR + K+SG Sbjct: 128 QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSG 184 >2N1B-A nrPDB Length = 261 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 17/177 (9%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + +F + YV T+ E + + ++ +WDTAG Sbjct: 50 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 109 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QE + LR Y ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 110 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIK 168 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + + + + +++ ++ Y + SAK+ + F R + Sbjct: 169 DRKVKAKSIVFHRKKNLQ---------------YYDISAKSNYNFEKPFLWLARKLI 210 >5UWI-A nrPDB Length = 237 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 17/177 (9%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + +F + YV T+ E + + ++ +WDTAG Sbjct: 30 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 89 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QE + LR Y ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 90 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIK 148 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + + + + +++ ++ Y + SAK+ + F R + Sbjct: 149 DRKVKAKSIVFHRKKNLQ---------------YYDISAKSNYNFEKPFLWLARKLI 190 >3T5G-A nrPDB Length = 181 Score = 160 bits (406), Expect = 3e-40, Method: Composition-based stats. Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 22/192 (11%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +K+ I+G + GK+ L I F + QF + Y PT+ + I V+G++ L L DTAGQ+ Sbjct: 6 SRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQD 65 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRN 123 +Y D + ++ +S+ S S E I + +PI+LVGNKKDL Sbjct: 66 EYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDL-- 123 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 + + EEG+ +A A ++E SAK +VF R L+A + Sbjct: 124 ----------HMERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFR---RIILEAEK 169 Query: 184 -----GKKKSGC 190 + KS C Sbjct: 170 MDGACSQGKSSC 181 >5CLL-A nrPDB Length = 191 Score = 160 bits (406), Expect = 3e-40, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 17/177 (9%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + +F + YV T+ E + + ++ +WDTAG Sbjct: 9 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 68 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 122 QE + LR Y ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIK 127 Query: 123 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 + + + + +++ ++ Y + SAK+ + F R + Sbjct: 128 DRKVKAKSIVFHRKKNLQ---------------YYDISAKSNYNFEKPFLWLARKLI 169 >3Q85-A nrPDB Length = 169 Score = 159 bits (404), Expect = 5e-40, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 18/181 (9%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYV-PTVFENYVADIEVDGKQVELALWDTAGQE 64 K+++VG+ GK+ L F Q + + Y I VD ++V L ++D Q Sbjct: 3 FKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQG 62 Query: 65 D-YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP--NVPIILVGNKKDL 121 D L+ D L+ FS+ S +PE ++ P ++P+ILVGNK DL Sbjct: 63 DAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPET-LLRLRAGRPHHDLPVILVGNKSDL 121 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 + V EEGR +A + + ++E SA RE+FE A R Sbjct: 122 ------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLR 168 Query: 182 R 182 R Sbjct: 169 R 169 >3RAP-R nrPDB Length = 167 Score = 158 bits (399), Expect = 2e-39, Method: Composition-based stats. Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 16/163 (9%) Query: 17 GKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPD 76 GK+ L + F F E Y PT+ + Y +IEVD L + DTAG E + +R L + Sbjct: 15 GKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 77 TDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKM 134 ++ +S+ + S ++I VK + VP+ILVGNK DL ++ Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREVSSSE--- 130 Query: 135 KQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 GR +A G +ME SAK+K V E+F R Sbjct: 131 ---------GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQ 163 >4CZ2-A nrPDB Length = 230 Score = 158 bits (399), Expect = 2e-39, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 20/186 (10%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQ-VELALWDTAGQ 63 K++++G+ GKT ++ + F + Y T+ ++ + + D + V L LWD AG Sbjct: 31 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 90 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV--KHFCPN---VPIILVGNK 118 E + + + Y + + F I + E + KW ++ K PN +P +L+ NK Sbjct: 91 ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 149 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 D D P + G G+ E SAK + E Sbjct: 150 CDQNKDSSM------------SPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKM 197 Query: 179 LQARRG 184 L + Sbjct: 198 LVNHQS 203 >3WYF-A nrPDB Length = 219 Score = 157 bits (397), Expect = 3e-39, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 17/174 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAGQ 63 KLV+VGDG GKT + +F + Y+ T+ E + + +++ +WDTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 E + LR Y + ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 + + + +++ ++ Y + SAK+ + F R Sbjct: 131 RKVKAKTITFHRKKNLQ---------------YYDISAKSNYNFEKPFLWLARK 169 >3OES-A nrPDB Length = 201 Score = 156 bits (396), Expect = 4e-39, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 14/180 (7%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +K+VI+G GKT L F + +F E Y PTV Y + + + L L DTAGQ++ Sbjct: 25 RKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDE 84 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTP-EVKHFCPNVPIILVGNKKDLRND 124 Y L ++ +S+ S S + I + H VP++LVGNK DL + Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSPE 144 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 V+ EG+ +A GA +ME SA+ + +F + + Sbjct: 145 ------------REVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQEIARVENS 191 >3Q72-A nrPDB Length = 166 Score = 156 bits (395), Expect = 6e-39, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 15/178 (8%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++++G GK+ L +F + Y I VDG++ L ++D Q+ Sbjct: 3 YKVLLLGAPGVGKSALARIFGGVEDGPEAEA-AGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGNKKDLRND 124 L D ++ +S+ S E E + +VPIILVGNK DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL--- 118 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 ++ V +EGR A + ++E SA V+ +FE R R Sbjct: 119 ---------VRSREVSVDEGRACAV-VFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >5XOJ-A nrPDB Length = 182 Score = 156 bits (394), Expect = 7e-39, Method: Composition-based stats. Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 17/174 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAGQ 63 KLV+VGDG GKT + +F + Y+ T+ E + + +++ +WDTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 E + LR Y + ++ F + S + +N+P W ++ C N+PI+L GNK D++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 + + + +++ ++ Y + SAK+ + F R Sbjct: 131 RKVKAKTITFHRKKNLQ---------------YYDISAKSNYNFEKPFLWLARK 169 >6FF8-A nrPDB Length = 181 Score = 156 bits (394), Expect = 8e-39, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 20/186 (10%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQ-VELALWDTAGQ 63 K++++G+ GKT ++ + F + Y T+ ++ + + D + V L LWD AG Sbjct: 9 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV--KHFCPN---VPIILVGNK 118 E + + + Y + + F I + E + KW ++ K PN +P +L+ NK Sbjct: 69 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 D D P + G G+ E SAK + E Sbjct: 128 CDQNKDSSQ------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 175 Query: 179 LQARRG 184 L + Sbjct: 176 LVNHQS 181 >2NZJ-A nrPDB Length = 175 Score = 151 bits (382), Expect = 2e-37, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 16/175 (9%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + ++V++GD GKT L +F+ Q +++ + Y + VDG+ L + DT Sbjct: 1 SMALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTW 60 Query: 62 GQEDYDRLRPL--SYPDTDVILMCFSIDSPDSLENIPE-KWTPEVKHFCPNVPIILVGNK 118 E D+ ++ +SI S E+ E + H +VPIILVGNK Sbjct: 61 EAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNK 120 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 173 DL + V EEGR A + ++E SA + V E+FE Sbjct: 121 ADL------------ARCREVSVEEGRACAV-VFDCKFIETSATLQHNVAELFEG 162 >5XC3-A nrPDB Length = 176 Score = 146 bits (368), Expect = 8e-36, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 76/187 (40%), Gaps = 16/187 (8%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV--DGKQVELALW 58 M K++++G GK+ ++ F ++ PT+ + + + +GK ++L +W Sbjct: 1 MENNGYKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIW 60 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIIL-VGN 117 DTAGQE + + + Y ++ L+ F + +S +++ W +++ C IL V N Sbjct: 61 DTAGQERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYY-WINDLRINCHTTYYILVVAN 119 Query: 118 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 K D+ + V E + Y+ S+ D V +F Sbjct: 120 KIDIDKNNWR-----------VSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMIDK 167 Query: 178 ALQARRG 184 + + Sbjct: 168 MSEIKIN 174 >3E5H-A nrPDB Length = 178 Score = 144 bits (364), Expect = 2e-35, Method: Composition-based stats. Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 18/186 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVF-ENYVADIEVDGK-QVELALWDTAG 62 + K+V++GDGA GKT L F+++ F + Y T+ + ++ I + G V L +WD G Sbjct: 6 QLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGG 65 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW--TPEVKHFCPNVPII-LVGNKK 119 Q ++ +L+ + I + S EN+ + + +V P++ LVGNK Sbjct: 66 QTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKI 125 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DL + +KPE+ G + SAKT D V F+ L Sbjct: 126 DLEH------------MRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKVAAEIL 172 Query: 180 QARRGK 185 + K Sbjct: 173 GIKLNK 178 >3CLV-A nrPDB Length = 208 Score = 141 bits (357), Expect = 1e-34, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 82/215 (38%), Gaps = 54/215 (25%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY---------------------- 42 K V++G+ + GK+ +++ +KD F E T+ ++ Sbjct: 7 SYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNN 66 Query: 43 -------VADIEVDGK---------QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSI 86 ++ + + ++ +WDTAGQE Y + PL Y ++ F I Sbjct: 67 NINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDI 126 Query: 87 DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRD 146 + ++L+ + W ++K N IILV NK D + E+ K Q+ Sbjct: 127 SNSNTLDRA-KTWVNQLK-ISSNYIIILVANKIDKNKFQVDILEVQKYAQD--------- 175 Query: 147 MANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 +++ SAKT ++ +F M + Sbjct: 176 -----NNLLFIQTSAKTGTNIKNIFYMLAEEIYKN 205 >4DJT-A nrPDB Length = 218 Score = 138 bits (349), Expect = 1e-33, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 17/177 (9%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFE--NYVADIEVDGKQVELALWDT 60 + K+ ++GDG GKT + +F + Y TV + V ++ G ++ +WDT Sbjct: 9 ELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDT 68 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKK 119 AGQE L+ + Y ++ F + S + +N+ +W E + N PI++ NK Sbjct: 69 AGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKI 127 Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 D++N + ++L + E Y E SAKT F R Sbjct: 128 DIKNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHNFGLPFLHLAR 171 >5C1S-A nrPDB Length = 391 Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 21/177 (11%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +L++VG GKT L D F E + E +++D + +++ D AGQ+ Sbjct: 62 EIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIAGQQ 116 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKDLRN 123 + Y D IL+ + I S ++ W P++ +C + II++GNKKD Sbjct: 117 SFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKDQEI 175 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 D + +E A + E S K D + +F+ +R LQ Sbjct: 176 D------------RIITRKEAEQFAQDR-LCQFYEISTKD-DSCQLLFDCISRDFLQ 218 Score = 82.2 bits (202), Expect = 1e-16, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 34/195 (17%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK--QVELAL--- 57 I+ ++++VGD GKT + F+ + PT +++ I + +++ + Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFA------LQDPT-GHDFMNAITTRFEMEKIKYEIIMI 272 Query: 58 -WDTAGQEDYDRL---RPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 113 W Y++L P + IL+ + I + +S +NI K+ P + + +V + Sbjct: 273 DWGF-----YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGV 327 Query: 114 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 173 +VG K DL Q + + +A+ +G + Y+E S+K + + + Sbjct: 328 IVGYKTDLE------------AQRKITMGDALTLADWLG-YKYVEMSSKDTEDHSSIIKA 374 Query: 174 ATRAALQARRGKKKS 188 + R ++S Sbjct: 375 LAHSIRINRLKIEQS 389 >3C5C-A nrPDB Length = 187 Score = 122 bits (306), Expect = 1e-28, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 22/183 (12%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 + L I+G GK+ L + F +F Y P + + Y ++ VD + V L + DTA Sbjct: 20 LEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA-- 77 Query: 64 EDYDRLR--PLSYPDTDVILMCFSIDSPDSLENIP---EKWTPEVKHFCPNVPIILVGNK 118 D D R L+ +S+DS S ++ E K ++P +L+GNK Sbjct: 78 -DLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNK 136 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSA-KTKDGVREVFEMATRA 177 D+ V EG +A R G + E SA + V+ VF A R Sbjct: 137 LDMAQY------------RQVTKAEGVALAGRFG-CLFFEVSACLDFEHVQHVFHEAVRE 183 Query: 178 ALQ 180 A + Sbjct: 184 ARR 186 >2AL7-A nrPDB Length = 186 Score = 110 bits (275), Expect = 4e-25, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 14/162 (8%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 L +VG GKT + V + QF E +PTV N V V + +WD GQ + Sbjct: 25 LTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRK---VTKGNVTIKIWDIGGQPRFR 81 Query: 68 RLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRNDEH 126 + + I+ + +E + + K +P++++GNK+DL N Sbjct: 82 SMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALD 141 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVR 168 ++ + KM ++ E Y S K KD + Sbjct: 142 EKQLIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173 >2YC4-C nrPDB Length = 208 Score = 109 bits (272), Expect = 9e-25, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 22/169 (13%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTVF-ENYVADIEVDGKQV--ELA 56 A +R K+ +VG+ GK+ L+ +F+ +F + Y T E VA + + V EL Sbjct: 17 ATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELF 76 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN----VPI 112 L DTAG + Y + ++ F + S +S E+ + W +K P+ + Sbjct: 77 LLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRA 135 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSA 161 +LV NK DL H V+ + +D A + + SA Sbjct: 136 VLVANKTDLPPQRH-----------QVRLDMAQDWATT-NTLDFFDVSA 172 >3D6T-B nrPDB Length = 171 Score = 108 bits (270), Expect = 2e-24, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 6/137 (4%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEV--YVPTVFENYVA-DIEVDGKQVE---LALWDT 60 KL+IVG+ GKT LL K + ++ TV + I++ K+ L +WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 AG+E++ P + L + + + + + W +K + P+ILVG D Sbjct: 62 AGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLD 121 Query: 121 LRNDEHTRRELAKMKQE 137 + +++ + ++K+ +E Sbjct: 122 VSDEKQRKACMSKITKE 138 >4ILE-A nrPDB Length = 184 Score = 106 bits (266), Expect = 5e-24, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 14/162 (8%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 L +VG GKT + V + QF E +PTV N + V + LWD GQ + Sbjct: 25 LTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRK---ITKGNVTIKLWDIGGQPRFR 81 Query: 68 RLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRNDEH 126 + I+ + +E + + K +P++++GNK+DL Sbjct: 82 SMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALD 141 Query: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVR 168 + + KM ++ E Y S K KD + Sbjct: 142 EKELIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173 >2LKD-A nrPDB Length = 178 Score = 101 bits (251), Expect = 3e-22, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + I+G GKT LL + E + + ++ +V ++ DT G E + Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQ-HIGAYQVTVNDKKITFLDTPGHEAFT 69 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R TD++++ + D P ++E I NVPII+ NK D + + Sbjct: 70 TMRARGAQVTDIVILVVAADDGVMPQTVEAINH-------AKAANVPIIVAINKMD-KPE 121 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 174 + R + ++ + + PEE G + + SAKTK+G+ + EM Sbjct: 122 ANPDRVMQELMEYNLVPEE------WGGDTIFCKLSAKTKEGLDHLLEMI 165 >3IHW-A nrPDB Length = 184 Score = 87.2 bits (215), Expect = 4e-18, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 17/181 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 K+ IVG+ + GK+ L+ + + + P + +I VDG+ L + D G Sbjct: 20 ELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFKKEIVVDGQSYLLLIRDEGGPP 78 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 123 + D ++ FS++ S + + + VP++LVG Sbjct: 79 EL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVG------- 126 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARR 183 T+ ++ + R ++ + Y E A V VF+ + + R+ Sbjct: 127 ---TQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRK 183 Query: 184 G 184 Sbjct: 184 K 184 >4WNR-A nrPDB Length = 349 Score = 77.9 bits (191), Expect = 3e-15, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 19/165 (11%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQ 63 K+++VGDG GKT LL + F T N + K++++ WD GQ Sbjct: 41 EVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQ 100 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123 E + ++ +DS + E W ++ F + P+++ NK D Sbjct: 101 EIMHATHQFFLSKRSLYILV--LDSRR--DEKAEYWLKHIRSFGGDSPVLVALNKIDENP 156 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVR 168 R+ + K +K G+ S K G+ Sbjct: 157 SFELNRKFLQEKYPSIK--------------GFFRISCKEDRGIE 187 >2IWR-A nrPDB Length = 178 Score = 77.5 bits (190), Expect = 3e-15, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 19/185 (10%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +L ++GD GK+ L+ F + +V T E Y ++ VDG+ + + +E Sbjct: 7 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLI-----RE 60 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIP--EKWTPEVK-HFCPNVPIILVGNKKDL 121 + D ++ FS++ +S + + ++ + + LVG Sbjct: 61 EAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVG----- 115 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 T+ ++ V R + + Y E A V VF+ + + Sbjct: 116 -----TQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTL 170 Query: 182 RRGKK 186 R+ ++ Sbjct: 171 RKQQQ 175 >6HLU-A nrPDB Length = 974 Score = 76.4 bits (187), Expect = 6e-15, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 64/186 (34%), Gaps = 26/186 (13%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-------IEVDG--KQVEL 55 K+ ++GDG GKT LL + F T N V +E D K+ Sbjct: 480 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 539 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 115 WD GQE + V ++ +DS ++ W ++ + P+I+V Sbjct: 540 HFWDFGGQEIMHASHQFFMTRSSVYMLL--LDSRT--DSNKHYWLRHIEKYGGKSPVIVV 595 Query: 116 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 NK D + ++ + ++ + S K DGV + + Sbjct: 596 MNKIDENPSYNIEQKKINERFPAIENR-------------FHRISCKNGDGVESIAKSLK 642 Query: 176 RAALQA 181 A L Sbjct: 643 SAVLHP 648 >3DPU-A nrPDB Length = 535 Score = 75.6 bits (185), Expect = 1e-14, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 64/186 (34%), Gaps = 26/186 (13%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-------IEVDG--KQVEL 55 K+ ++GDG GKT LL + F T N V +E D K+ Sbjct: 41 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 100 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 115 WD GQE + V ++ +DS ++ W ++ + P+I+V Sbjct: 101 HFWDFGGQEIMHASHQFFMTRSSVYMLL--LDSRT--DSNKHYWLRHIEKYGGKSPVIVV 156 Query: 116 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 NK D + ++ + ++ + S K DGV + + Sbjct: 157 MNKIDENPSYNIEQKKINERFPAIENR-------------FHRISCKNGDGVESIAKSLK 203 Query: 176 RAALQA 181 A L Sbjct: 204 SAVLHP 209 >3LVQ-E nrPDB Length = 497 Score = 75.6 bits (185), Expect = 1e-14, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 5/140 (3%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 ++ +++++G A GKT +L Q +PTV N V K V+ +WD Sbjct: 318 LSNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVE---TVTYKNVKFNVWDV 373 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKK 119 GQ+ L Y T ++ D ++ ++ + + I++ NK+ Sbjct: 374 GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQ 433 Query: 120 DLRNDEHTRRELAKMKQEPV 139 DL + K+ + Sbjct: 434 DLPDAMKPHEIQEKLGLTRI 453 >4YLG-A nrPDB Length = 173 Score = 75.2 bits (184), Expect = 2e-14, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 16/161 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ+ Sbjct: 13 EMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQD 68 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV-GNKKDLRN 123 L Y +T I+ + D + E+ + I+LV NK DL Sbjct: 69 KIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHDLPQ 128 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTK 164 K+ + +K + Y + S T Sbjct: 129 AMSISEVTEKLGLQTIKNRK-----------WYCQTSCATN 158 >2A5F-A nrPDB Length = 175 Score = 73.7 bits (180), Expect = 5e-14, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 5/136 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G A GKT +L Q +PTV N V K V+ +WD GQ+ Sbjct: 13 EMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVE---TVTYKNVKFNVWDVGGQD 68 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 123 L Y T ++ D ++ ++ + + I++ NK+DL + Sbjct: 69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 128 Query: 124 DEHTRRELAKMKQEPV 139 K+ + Sbjct: 129 AMKPHEIQEKLGLTRI 144 >3LRP-A nrPDB Length = 181 Score = 73.3 bits (179), Expect = 5e-14, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 5/134 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L + +PT+ N V+ + + +WD GQ+ Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVE---TVEFRNISFTVWDVGGQDKI 74 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV-GNKKDLRNDE 125 L Y +TD ++ + + +++ E+ + IILV NK+DL N Sbjct: 75 RPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAM 134 Query: 126 HTRRELAKMKQEPV 139 K+ + Sbjct: 135 SAAEVTEKLHLNTI 148 >2H16-A nrPDB Length = 183 Score = 71.8 bits (175), Expect = 2e-13, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 5/138 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K++IVG GKT +L FS ++ PT+ N V +I ++ + +WD GQE Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHTS-PTIGSN-VEEIVINNTR--FLMWDIGGQESL 79 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDE 125 Y +T+ +++ + + E+ + H +++ NK+D++ Sbjct: 80 RSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKECM 139 Query: 126 HTRRELAKMKQEPVKPEE 143 +K +K + Sbjct: 140 TVAEISQFLKLTSIKDHQ 157 >1YZG-A nrPDB Length = 179 Score = 71.8 bits (175), Expect = 2e-13, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 5/117 (4%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K++IVG GKT +L F ++ PT+ N + K +WD GQE Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEIVV---KNTHFLMWDIGGQESL 73 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV-GNKKDLR 122 Y +T+ I++ + L E+ + H +L+ NK+D++ Sbjct: 74 RSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130 >6BBQ-A nrPDB Length = 520 Score = 71.8 bits (175), Expect = 2e-13, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 5/136 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G A GKT +L Q +PTV N V K V+ +WD G + Sbjct: 359 EMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVE---TVTYKNVKFNVWDVGGLD 414 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 123 L Y T ++ D ++ ++ + + I++ NK+DL + Sbjct: 415 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 474 Query: 124 DEHTRRELAKMKQEPV 139 K+ + Sbjct: 475 AMKPHEIQEKLGLTRI 490 >1Z6X-A nrPDB Length = 180 Score = 71.4 bits (174), Expect = 2e-13, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 57/136 (41%), Gaps = 5/136 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 + ++++VG A GKT +L + +PT+ N V+ K + +WD GQ+ Sbjct: 17 QMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNICFTVWDVGGQD 72 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCPNVPIILVGNKKDLRN 123 L + +T ++ + + ++ + ++ + + ++L NK+DL N Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPN 132 Query: 124 DEHTRRELAKMKQEPV 139 K+ + + Sbjct: 133 AMAISEMTDKLGLQSL 148 >5NZV-F nrPDB Length = 181 Score = 71.0 bits (173), Expect = 3e-13, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 5/136 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG GKT +L + +PT+ N V K + +WD GQ+ Sbjct: 17 EMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVE---TVQYKNISFTVWDVGGQD 72 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 123 L Y +T+ ++ + + E + + N ++ NK+DL Sbjct: 73 RIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPE 132 Query: 124 DEHTRRELAKMKQEPV 139 K+ + Sbjct: 133 AMSAAEITEKLGLHSI 148 >6FAE-B nrPDB Length = 213 Score = 70.6 bits (172), Expect = 4e-13, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 5/130 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ+ Sbjct: 51 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQDKI 106 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRNDE 125 L + +T ++ + + + E+ + + + +++ NK+DL N Sbjct: 107 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAM 166 Query: 126 HTRRELAKMK 135 + K+ Sbjct: 167 NAAEITDKLG 176 >3O47-A nrPDB Length = 329 Score = 70.2 bits (171), Expect = 5e-13, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 5/132 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ+ Sbjct: 165 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQD 220 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 123 L + +T ++ + + + E+ + + + +++ NK+DL N Sbjct: 221 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 280 Query: 124 DEHTRRELAKMK 135 + K+ Sbjct: 281 AMNAAEITDKLG 292 >4KJZ-A nrPDB Length = 473 Score = 69.1 bits (168), Expect = 1e-12, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 18/170 (10%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 +VI+G GKT LL K + E + + +V EV Q + DT G E + Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQ-HVGAFEVKTPQGTVVFIDTPGHEAFT 133 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R D+ ++ + D P + E I K +I NK DL Sbjct: 134 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 186 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 174 + + + M++ V E G G + SAKT GV+++ EM Sbjct: 187 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 229 >4B44-A nrPDB Length = 363 Score = 69.1 bits (168), Expect = 1e-12, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 18/170 (10%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 +VI+G GKT LL K + E + + +V EV Q + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQ-HVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R D+ ++ + D P + E I K +I NK DL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 174 + + + M++ V E G G + SAKT GV+++ EM Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230 >3J4J-A nrPDB Length = 569 Score = 68.3 bits (166), Expect = 2e-12, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 18/170 (10%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 +VI+G GKT LL K + E + + +V EV Q + DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQ-HVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R D+ ++ + D P + E I K +I NK DL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 174 + + + M++ V E G G + SAKT GV+++ EM Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230 >2B6H-A nrPDB Length = 192 Score = 68.3 bits (166), Expect = 2e-12, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 55/132 (41%), Gaps = 5/132 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 + ++++VG A GKT +L + +PT+ N V+ K + +WD GQ+ Sbjct: 29 QMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNICFTVWDVGGQD 84 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH-FCPNVPIILVGNKKDLRN 123 L + +T ++ + + ++ ++ ++ + +++ NK+D+ N Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPN 144 Query: 124 DEHTRRELAKMK 135 K+ Sbjct: 145 AMPVSELTDKLG 156 >3AQ4-A nrPDB Length = 184 Score = 67.9 bits (165), Expect = 3e-12, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 5/132 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ+ Sbjct: 20 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQD 75 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 123 L + +T ++ + D + ++ + + + +++ NK+DL N Sbjct: 76 KIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN 135 Query: 124 DEHTRRELAKMK 135 + K+ Sbjct: 136 AMNAAEITDKLG 147 >6GB2-BC nrPDB Length = 657 Score = 67.9 bits (165), Expect = 3e-12, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 17/185 (9%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + I+G GKT LL F K Q V + ++ A + ++ DT G + Sbjct: 113 VTIMGHVDHGKTTLLDKFRKTQVAAVETGGITQHIGAFLVSLPSGEKITFLDTPGHAAFS 172 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R TD++++ + D ++E+I VPIIL NK D Sbjct: 173 AMRARGAQVTDIVVLVVAADDGVMKQTVESIQH-------AKDAQVPIILAVNKCDKAEA 225 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 184 + + + + + V + G G + SA T D + + E A Sbjct: 226 DPEKVKKELLAYDVVCEDYG-------GDVQAVPVSALTGDNLMALAEATVALAEMLELK 278 Query: 185 KKKSG 189 +G Sbjct: 279 ADPNG 283 >6DFF-C nrPDB Length = 193 Score = 67.5 bits (164), Expect = 3e-12, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 53/132 (40%), Gaps = 5/132 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L + +PT+ N V+ K + +WD G + Sbjct: 29 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGLD 84 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRN 123 L + +T ++ + + + E+ + + + +++ NK+DL N Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 144 Query: 124 DEHTRRELAKMK 135 + K+ Sbjct: 145 AMNAAEITDKLG 156 >5UF8-A nrPDB Length = 181 Score = 67.1 bits (163), Expect = 4e-12, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 5/136 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L + +PT+ N V+ K + +WD GQ+ Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQD 72 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV-GNKKDLRN 123 L + +T I+ + D + E+ + ++LV NK+DL N Sbjct: 73 KIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQDLPN 132 Query: 124 DEHTRRELAKMKQEPV 139 + K+ + Sbjct: 133 AMNAAEITEKLGLHSI 148 >1J2J-A nrPDB Length = 166 Score = 67.1 bits (163), Expect = 4e-12, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 5/130 (3%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L + +PT+ N V+ K + +WD G + Sbjct: 4 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGLDKI 59 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRNDE 125 L + +T ++ + + + E+ + + + +++ NK+DL N Sbjct: 60 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAM 119 Query: 126 HTRRELAKMK 135 + K+ Sbjct: 120 NAAEITDKLG 129 >3IZY-P nrPDB Length = 537 Score = 67.1 bits (163), Expect = 4e-12, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 17/162 (10%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + I+G GKT LL K Q + + ++ A + ++ DT G + Sbjct: 7 VTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITFLDTPGHAAFS 66 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R TD++++ + D ++E+I +VPI+L NK D Sbjct: 67 AMRARGTQVTDIVILVVAADDGVMKQTVESIQH-------AKDAHVPIVLAINKCDKAEA 119 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDG 166 + + + + + V + G G + SA T + Sbjct: 120 DPEKVKKELLAYDVVCEDYG-------GDVQAVHVSALTGEN 154 >4ZI3-A nrPDB Length = 190 Score = 66.8 bits (162), Expect = 6e-12, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 15/166 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G GKT LL + + PT N + ++ G +L +WD GQ Sbjct: 17 EVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFN-IKSVQSQG--FKLNVWDIGGQR 72 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRN 123 + +TD+++ E ++ T ++ + VP+++ NK+DL Sbjct: 73 KIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT 132 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 169 + + +R+ CSA T +GV++ Sbjct: 133 AAPASEIAEGLNLHTI--------RDRVWQIQS--CSALTGEGVQD 168 >3JCN-b nrPDB Length = 890 Score = 64.8 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 22/192 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + I+G GKT LL + + + ++ V+ + + DT G + Sbjct: 394 VTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQ-HIGAYHVETENGMITFLDTPGHAAFT 452 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R TD++++ + D P ++E I +V NK D + + Sbjct: 453 SMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-------NKID-KPE 504 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA----LQ 180 R ++ Q + PEE G ++ SAK G+ E+ + A L+ Sbjct: 505 ADPDRVKNELSQYGILPEE------WGGESQFVHVSAKAGTGIDELLDAILLQAEVLELK 558 Query: 181 ARRGKKKSGCLI 192 A R SG +I Sbjct: 559 AVRKGMASGAVI 570 >1ZO1-I nrPDB Length = 501 Score = 64.8 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 22/192 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + I+G GKT LL + + + ++ V+ + + DT G + Sbjct: 7 VTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQ-HIGAYHVETENGMITFLDTPGHAAFT 65 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 +R TD++++ + D P ++E I +V NK D + + Sbjct: 66 SMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-------NKID-KPE 117 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA----LQ 180 R ++ Q + PEE G ++ SAK G+ E+ + A L+ Sbjct: 118 ADPDRVKNELSQYGILPEE------WGGESQFVHVSAKAGTGIDELLDAILLQAEVLELK 171 Query: 181 ARRGKKKSGCLI 192 A R SG +I Sbjct: 172 AVRKGMASGAVI 183 >3BH6-A nrPDB Length = 164 Score = 64.1 bits (155), Expect = 4e-11, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 15/166 (9%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G GKT LL + + PT N + ++ G +L +WD G Sbjct: 4 EVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFN-IKSVQSQG--FKLNVWDIGGLR 59 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRN 123 + +TD+++ E ++ T ++ + VP+++ NK+DL Sbjct: 60 KIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT 119 Query: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 169 + + +R+ CSA T +GV++ Sbjct: 120 AAPASEIAEGLNLHTI--------RDRVWQIQS--CSALTGEGVQD 155 >1MOZ-A nrPDB Length = 183 Score = 64.1 bits (155), Expect = 4e-11, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 5/137 (3%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++I+G GKT +L + PT+ N + K ++L +WD GQ Sbjct: 18 ELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIGFNVE---TLSYKNLKLNVWDLGGQT 73 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRN 123 Y DT ++ D + ++ ++ + +++ NK+D Sbjct: 74 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPG 133 Query: 124 DEHTRRELAKMKQEPVK 140 ++ +K Sbjct: 134 ALSASEVSKELNLVELK 150 >5EE5-B nrPDB Length = 171 Score = 63.7 bits (154), Expect = 5e-11, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 22/183 (12%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++I+G GKT +L + +PT+ N V K ++ +WD G Sbjct: 7 EMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVE---TVTYKNLKFQVWDLGGLT 62 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPD----SLENIPEKWTPEVKHFCPNVPIILVGNKKD 120 Y +TD ++ D S + E +++ NK+D Sbjct: 63 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKA---ILVVFANKQD 119 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 + + + + +R + SA G+ E E L+ Sbjct: 120 MEQAMTSSEMANSLGLP--------ALKDRKWQI--FKTSATKGTGLDEAMEWLVET-LK 168 Query: 181 ARR 183 +R+ Sbjct: 169 SRQ 171 >4V0N-A nrPDB Length = 169 Score = 62.5 bits (151), Expect = 1e-10, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 5/141 (3%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 A+ + +++VG GKT ++ + + PTV EV+ + ++D Sbjct: 3 ASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVD---EVEKGPLTFTVFDM 59 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKK 119 +G Y L Y + D ++ + ++ +KH VPI+ NKK Sbjct: 60 SGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKK 119 Query: 120 DLRNDEHTRRELAKMKQEPVK 140 DL + + +K Sbjct: 120 DLPVAMPPVEIAQALGLDDIK 140 >2H57-A nrPDB Length = 190 Score = 62.5 bits (151), Expect = 1e-10, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 11/139 (7%) Query: 8 LVIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++ +G GKT ++ + + +PT+ + + ++D +GQ Y Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKF---KSSSLSFTVFDMSGQGRY 80 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW-----TPEVKHFCPNVPIILVGNKKDL 121 L Y + I+ + E+ P++KH +PI+ NK DL Sbjct: 81 RNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRR--IPILFFANKMDL 138 Query: 122 RNDEHTRRELAKMKQEPVK 140 R+ + + + E +K Sbjct: 139 RDAVTSVKVSQLLCLENIK 157 >2YWH-A nrPDB Length = 600 Score = 62.1 bits (150), Expect = 1e-10, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 64/201 (31%), Gaps = 35/201 (17%) Query: 6 KKLVIVGDGACGKTCLLIV-------FSKDQFPEVYVPTVFENYVADIEV---------- 48 + I+ GK+ L S+ + E + T+ I V Sbjct: 7 RNFCIIAHVDHGKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYK 66 Query: 49 --DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF 106 DG +L L DT G D+ + + L+ + + W K Sbjct: 67 AKDGNTYKLHLIDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFW----KAV 122 Query: 107 CPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDG 166 ++ II V NK DL + + R + + + PEE + SAK G Sbjct: 123 EQDLVIIPVINKIDLPSADVDRVKKQIEEVLGLDPEEA------------ILASAKEGIG 170 Query: 167 VREVFEMATRAALQARRGKKK 187 + E+ E + +K Sbjct: 171 IEEILEAIVNRIPPPKGDPQK 191 >1KSG-A nrPDB Length = 186 Score = 61.4 bits (148), Expect = 3e-10, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 5/119 (4%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +L+++G GKT +L F + + PT+ N ++ + +L +WD GQ+ Sbjct: 18 ELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIK---TLEHRGFKLNIWDVGGQK 73 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLR 122 + TD ++ +++ + + + +++ NK+DL Sbjct: 74 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLP 132 >4C0K-A nrPDB Length = 423 Score = 61.0 bits (147), Expect = 3e-10, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 8/126 (6%) Query: 6 KKLVIVGDGACGKTCLLIVFS---KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 K ++G GKT + F + T N + ++V G++ L L D Sbjct: 247 YKCHVIGPKGSGKTGMCRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILRDIDV 306 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDL 121 + D L+P + DV + + +P S E + + +K++ + +P+++VG K D+ Sbjct: 307 RHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIY---IKYYAESKIPVMIVGTKCDM 362 Query: 122 RNDEHT 127 Sbjct: 363 DERRQD 368 >2GAO-A nrPDB Length = 208 Score = 59.8 bits (144), Expect = 8e-10, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 9/170 (5%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV +G GKT LL + D+ +VPT+ + E+ + +D G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTL---HPTSEELTIAGMTFTTFDLGGHEQA 92 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSL-ENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 R+ P + I+ L E+ E NVPI+++GNK D + Sbjct: 93 RRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAI 152 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFG---YMECSAKTKDGVREVFE 172 + +G + A +M CS + G E F Sbjct: 153 SEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFM-CSVLKRQGYGEGFR 201 >4ARZ-A nrPDB Length = 310 Score = 57.1 bits (137), Expect = 5e-09, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 64/147 (43%), Gaps = 13/147 (8%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKD--QFPE-VYVPTVFENYVADIEVDGKQVELALWDTA 61 RKKL+++G GK+ + + + F T+ + + + L LWD Sbjct: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN--MTLNLWDCG 63 Query: 62 GQE-----DYDRLRPLSYPDTDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIIL 114 GQ+ + + + + V++ F ++S + L++I K +++ + P+ I + Sbjct: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 Query: 115 VGNKKDLRNDEHTRRELAKMKQEPVKP 141 + +K DL R EL ++ + + Sbjct: 124 LLHKMDL-VQLDKREELFQIMMKNLSE 149 >5DE3-A nrPDB Length = 169 Score = 55.6 bits (133), Expect = 1e-08, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 15/164 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +++++G GKT +L S+ + PT N + + DG L +WD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSE-EDITTITPTQGFN-IKSLSRDG--FNLKIWDIGGQKSI 57 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDE 125 + TD ++ L + T ++ VP+++ NK+DL Sbjct: 58 RPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDLVGAL 117 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 169 + + ++ + A CSAK G++E Sbjct: 118 AADEIASTLDLTSIRDRPWQIQA----------CSAKQGTGLKE 151 >1M2O-B nrPDB Length = 190 Score = 55.2 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 22/174 (12%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQF---PEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KL+ +G GKT LL + D+ + PT E + +I + +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNI-------KFTTFDLGGH 77 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW-----TPEVKHFCPNVPIILVGNK 118 RL +P+ + I+ P+ + + E+K +VP +++GNK Sbjct: 78 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 133 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 D N + + G CS ++G E F+ Sbjct: 134 IDAPNAVSEAELRSALGLLNTT---GSQRIEGQRPVEVFMCSVVMRNGYLEAFQ 184 >6GNI-B nrPDB Length = 167 Score = 55.2 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 22/174 (12%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQF---PEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KL+ +G GKT LL + D+ + PT E + +I + +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNI-------KFTTFDLGGH 55 Query: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW-----TPEVKHFCPNVPIILVGNK 118 RL +P+ + I+ P+ + + E+K +VP +++GNK Sbjct: 56 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 111 Query: 119 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 D N + + G CS ++G E F+ Sbjct: 112 IDAPNAVSEAELRSALGLLNTT---GSQRIEGQRPVEVFMCSVVMRNGYLEAFQ 162 >1F6B-A nrPDB Length = 198 Score = 54.8 bits (131), Expect = 2e-08, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 9/170 (5%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV +G GKT LL + D+ +VPT+ + E+ + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTL---HPTSEELTIAGMTFTTFDLGGHIQA 82 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDE 125 R+ P + I+ + L E+ + NVPI+++GNK D Sbjct: 83 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAI 142 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFG---YMECSAKTKDGVREVFE 172 R +G + A +M CS + G E F Sbjct: 143 SEERLREMFGLYGQTTGKGSVSLKELNARPLEVFM-CSVLKRQGYGEGFR 191 >5J8B-z nrPDB Length = 679 Score = 54.4 bits (130), Expect = 3e-08, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 35/188 (18%) Query: 10 IVGDGACGKTCLLIVF-------SKDQFPEVYVPTVFENYVADIEV------------DG 50 I+ GK+ L S + E ++ ++ I + DG Sbjct: 83 IIAHVDHGKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDG 142 Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNV 110 ++ L DT G D+ + + +L+ E + + + Sbjct: 143 EEYVFHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGH---- 198 Query: 111 PIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 II V NK DL N L + + +E + S KT +GV E+ Sbjct: 199 VIIPVINKIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEI 246 Query: 171 FEMATRAA 178 E + Sbjct: 247 LEAIVQRI 254 >5IMR-C nrPDB Length = 610 Score = 54.4 bits (130), Expect = 3e-08, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 35/188 (18%) Query: 10 IVGDGACGKTCLLIVF-------SKDQFPEVYVPTVFENYVADIEV------------DG 50 I+ GK+ L S + E ++ ++ I + DG Sbjct: 14 IIAHVDHGKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDG 73 Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNV 110 ++ L DT G D+ + + +L+ E + + + Sbjct: 74 EEYVFHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGH---- 129 Query: 111 PIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 II V NK DL N L + + +E + S KT +GV E+ Sbjct: 130 VIIPVINKIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEI 177 Query: 171 FEMATRAA 178 E + Sbjct: 178 LEAIVQRI 185 >6CES-A nrPDB Length = 313 Score = 54.4 bits (130), Expect = 3e-08, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 60/146 (41%), Gaps = 14/146 (9%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKD---QFPEVYVPTVFENYVADIEVDGKQVELALWD 59 A++KK++++G GKT + + + + T+ + + + L LWD Sbjct: 5 AMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGN--LVLNLWD 62 Query: 60 TAGQE-----DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKW---TPEVKHFCPNVP 111 GQ+ + R + + +V++ F ++S + LE + + P+ Sbjct: 63 CGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE-LEKDMHYYQSCLEAILQNSPDAK 121 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQE 137 I + +K DL ++ + +++ Sbjct: 122 IFCLVHKMDLVQEDQRDLIFKEREED 147 >2GJ9-A nrPDB Length = 172 Score = 54.0 bits (129), Expect = 4e-08, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 13/149 (8%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQ--FPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ- 63 K+VI G GK+ LL + + T + I +DG L + DTAG Sbjct: 6 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIIDTAGLR 63 Query: 64 ------EDYDRLRP-LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVG 116 E R D +L + D+++ E W + +PI +V Sbjct: 64 EASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA-EIWPEFIARLPAKLPITVVR 122 Query: 117 NKKDLRNDEHTRRELAKMKQEPVKPEEGR 145 NK D+ + E+ + G Sbjct: 123 NKADITGETLGMSEVNGHALIRLSARTGE 151 >5YT0-A nrPDB Length = 364 Score = 52.9 bits (126), Expect = 8e-08, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 27/133 (20%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG------------KQVEL 55 +V++G GKT LL + + ++ A I V+L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + DT G E + LR D ++ I P + E + + E + Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL--ELLKERR--- 133 Query: 108 PNVPIILVGNKKD 120 VP ++ NK D Sbjct: 134 --VPFLIAANKID 144 >5FG3-A nrPDB Length = 623 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 27/133 (20%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG------------KQVEL 55 +V++G GKT LL + + ++ A I V+L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + DT G E + LR D ++ I P + E + + E + Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL--ELLKERR--- 133 Query: 108 PNVPIILVGNKKD 120 VP ++ NK D Sbjct: 134 --VPFLIAANKID 144 >2X77-A nrPDB Length = 189 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 62/181 (34%), Gaps = 15/181 (8%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A + +++++G GKT +L V TV V + K + +WD Sbjct: 19 ADRKIRVLMLGLDNAGKTSILYRLHLG----DVVTTVPTVGVNLETLQYKNISFEVWDLG 74 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV-GNKKD 120 GQ + DTD ++ D + + + ++L+ NK+D Sbjct: 75 GQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQD 134 Query: 121 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 180 L + ++ + NR ++ S+KT DG+ E + + Sbjct: 135 LPDAASEAEIAEQLGVSSIM--------NRTWTI--VKSSSKTGDGLVEGMDWLVERLRE 184 Query: 181 A 181 Sbjct: 185 Q 185 >3CB4-D nrPDB Length = 599 Score = 51.0 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 58/191 (30%), Gaps = 41/191 (21%) Query: 10 IVGDGACGKTCL---LIVFSKDQFPEVYVPTVFENY----VADIEV------------DG 50 I+ GK+ L +I V ++ I + DG Sbjct: 9 IIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDG 68 Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSI---DSPDSLENIPEKWTPEVKHFC 107 + +L DT G D+ S + L+ +L N +++ Sbjct: 69 ETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEV-- 126 Query: 108 PNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGV 167 VP++ NK DL + R + + + CSAKT GV Sbjct: 127 --VPVL---NKIDLPAADPERVAEEIEDIVGIDATDA------------VRCSAKTGVGV 169 Query: 168 REVFEMATRAA 178 ++V E R Sbjct: 170 QDVLERLVRDI 180 >3GEH-A nrPDB Length = 462 Score = 50.6 bits (120), Expect = 4e-07, Method: Composition-based stats. Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 25/155 (16%) Query: 6 KKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTVFENYVADIEVDGKQVELALWDTAG- 62 K+ IVG GK+ LL +S+ T + + + V G V + DTAG Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPV--QVLDTAGI 282 Query: 63 -----Q-EDYDRLR-PLSYPDTDVILMCFSIDSPDSLENIPEKWTP---EVKHFCPNVPI 112 Q E R + D++L+ WT E+ + P+ Sbjct: 283 RETSDQVEKIGVERSRQAANTADLVLLTID---------AATGWTTGDQEIYEQVKHRPL 333 Query: 113 ILVGNKKDL-RNDEHTRRELAKMKQEPVKPEEGRD 146 ILV NK DL T E + + V + Sbjct: 334 ILVMNKIDLVEKQLITSLEYPENITQIVHTAAAQK 368 >1XZP-A nrPDB Length = 482 Score = 49.8 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 32/196 (16%) Query: 6 KKLVIVGDGACGKTCLLIVFS--KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG- 62 ++VIVG GK+ LL T + +I + G + + DTAG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGV 301 Query: 63 -------QEDYDRLRP-LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIIL 114 E R D++L SP L+ K +K N ++ Sbjct: 302 RSETNDLVERLGIERTLQEIEKADIVLFVLDASSP--LDEEDRKILERIK----NKRYLV 355 Query: 115 VGNKKD----LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 V NK D + +E + + +G + ++ Y E +E+ Sbjct: 356 VINKVDVVEKINEEEIKNKLGTDRHMVKISALKGEGL-EKLEESIYRET--------QEI 406 Query: 171 FEMATRAALQARRGKK 186 FE + + + R K+ Sbjct: 407 FERGSDSLITNLRQKQ 422 >5DI3-B nrPDB Length = 263 Score = 49.0 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 5/122 (4%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 + + ++G GKT LL + + PT N ++ + ++ ++D G + Sbjct: 4 KITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLGGGK 59 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 123 + + + I+ P E ++ F + PI + NK+DL Sbjct: 60 NIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPT 119 Query: 124 DE 125 Sbjct: 120 AA 121 >4M9Q-A nrPDB Length = 227 Score = 48.7 bits (115), Expect = 1e-06, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 5/122 (4%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 + + ++G GKT LL + + PT N ++ + ++ ++D G + Sbjct: 4 KITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLGGGK 59 Query: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 123 + + + I+ P E ++ F + PI + NK+DL Sbjct: 60 NIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPT 119 Query: 124 DE 125 Sbjct: 120 AA 121 >4BAS-A nrPDB Length = 199 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 10/127 (7%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + + ++V+ G GKT ++ Q ++ T Y + + +V ++D Sbjct: 14 SKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHI-TATVGYNVE-TFEKGRVAFTVFDMG 71 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKH--------FCPNVPII 113 G + + L Y + D ++ L + + +KH VP + Sbjct: 72 GAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFL 131 Query: 114 LVGNKKD 120 NK D Sbjct: 132 FFANKMD 138 >5LAD-A nrPDB Length = 404 Score = 48.3 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 20/140 (14%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFP--EVYVPTVFENYVADIEV-DGKQVELALW 58 A R+ +V+ G GK+ + Y T + +E+ V L Sbjct: 6 AGFRRYIVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--V 63 Query: 59 DTAGQEDYDRL--------RPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNV 110 DT G +D L R + Y D ++ P E+ E++ + Sbjct: 64 DTPGLDDVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYEDDVVNLFKEME-----I 116 Query: 111 PIILVGNKKDLRNDEHTRRE 130 P ++V NK D+ ++ + Sbjct: 117 PFVVVVNKIDVLGEKAEELK 136 >1WF3-A nrPDB Length = 301 Score = 48.3 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 72/207 (34%), Gaps = 40/207 (19%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVY-VPTVFENYVADIEVDGKQVELALWDTAG---- 62 + IVG GK+ LL + + P + I +G++ ++ DT G Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68 Query: 63 ---------QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 113 QE Y+ L + ++ + P + E+ E +K VPI+ Sbjct: 69 MDALGEFMDQEVYEALAD-----VNAVVWVVDLRHPPTPED--ELVARALKPLVGKVPIL 121 Query: 114 LVGNKKDLRN-------------DEHTRRELAKMKQEPVKPEEGRDMA-NRIGAFGYMEC 159 LVGNK D E R L+ + + V + +A G F Y E Sbjct: 122 LVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPED 181 Query: 160 SAKTKDGVREVFEMATRAALQARRGKK 186 AK+ + F L+ K+ Sbjct: 182 YAKS----DQTFGEWVAEILREEAMKR 204 >4NCL-A nrPDB Length = 457 Score = 47.9 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 52/219 (23%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYV----PTVFENY---------VADIEVDGK-QV 53 I+G GKT LL + E + Y A + DGK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 54 E---LALWDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + L + DT G E + LR ++ ++ I P ++E++ + E K Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK--- 127 Query: 108 PNVPIILVGNKKD-----LRNDEHTRRELAKMKQEPVKPEE-------GRDMANR-IGAF 154 P ++ NK D + + + RE ++ + V+ E A + + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQA 181 + E SA T +G+ ++ ++ + + Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQER 224 >4N3G-A nrPDB Length = 603 Score = 47.9 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 52/219 (23%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYV----PTVFENY---------VADIEVDGK-QV 53 I+G GKT LL + E + Y A + DGK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 54 E---LALWDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + L + DT G E + LR ++ ++ I P ++E++ + E K Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK--- 127 Query: 108 PNVPIILVGNKKD-----LRNDEHTRRELAKMKQEPVKPEE-------GRDMANR-IGAF 154 P ++ NK D + + + RE ++ + V+ E A + + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQA 181 + E SA T +G+ ++ ++ + + Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQER 224 >4TN1-B nrPDB Length = 345 Score = 47.5 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 52/219 (23%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYV----PTVFENY---------VADIEVDGK-QV 53 I+G GKT LL + E + Y A + DGK + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 54 E---LALWDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + L + DT G E + LR ++ ++ I P ++E++ + E K Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK--- 127 Query: 108 PNVPIILVGNKKD-----LRNDEHTRRELAKMKQEPVKPEE-------GRDMANR-IGAF 154 P ++ NK D + + + RE ++ + V+ E A + + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQA 181 + E SA T +G+ ++ ++ + + Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQER 224 >3T1O-A nrPDB Length = 198 Score = 46.3 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 35/196 (17%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPE-----------VYVPTVFENYV-ADI-EVD 49 I K+V G G GKT L + + PE T+F +++ DI EV Sbjct: 12 EINFKIVYYGPGLSGKTTNL-KWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEVK 70 Query: 50 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSID------SPDSLENIPEKWTPEV 103 G + L+ GQ Y+ R L D I+ + +S+ N+ E E Sbjct: 71 GFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMREN-LAEY 129 Query: 104 KHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKT 163 +VPI++ NK+DL + + E R + + G F +E A Sbjct: 130 GLTLDDVPIVIQVNKRDLPD--------------ALPVEMVRAVVDPEGKFPVLEAVATE 175 Query: 164 KDGVREVFEMATRAAL 179 GV E + +R L Sbjct: 176 GKGVFETLKEVSRLVL 191 >3J8G-X nrPDB Length = 490 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 35/191 (18%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVP--TVFENYVADIEVDGKQVELALWDT 60 ++ KL IVG GK+ L ++ VY T ++ +E DG++ L DT Sbjct: 200 SLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLI--DT 257 Query: 61 AG----------QEDYDRLRP-LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN 109 AG E + ++ + D +V+++ ID+ + + + + + + Sbjct: 258 AGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLV--IDAREGISDQDLSLLGFILNSGRS 315 Query: 110 VPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGY---MECSAKTKDG 166 + I++ NK D L++ +E VK + R+G + SA G Sbjct: 316 LVIVV--NKWD---------GLSQEVKEQVK----ETLDFRLGFIDFARVHFISALHGSG 360 Query: 167 VREVFEMATRA 177 V +FE A Sbjct: 361 VGNLFESVREA 371 Score = 34.4 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 16/142 (11%) Query: 8 LVIVGDGACGKTCLLIVF--SKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA---G 62 + +VG GK+ L ++D + + E++G++ DT G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGRE--FICIDTGGIDG 62 Query: 63 QEDY--DRLRPLS---YPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 117 ED R+ S + DV+L F +D+ L E ++ P LV N Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVL--FMVDARAGLMPADEAIAKHLRSREK--PTFLVAN 118 Query: 118 KKDLRNDEHTRRELAKMKQEPV 139 K D + + + + + Sbjct: 119 KTDGLDPDQAVVDFYSLGLGEI 140 >1G7S-A nrPDB Length = 594 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 21/130 (16%) Query: 8 LVIVGDGACGKTCLLIVFSKD-----------------QFPEVYVPTVFENYVADIEVDG 50 + ++G GKT LL + P + + +++ + Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRE 67 Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNV 110 L DT G E + LR D+ ++ I+ + + ++ ++ + Sbjct: 68 TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDIN--EGFKPQTQEALNILRMYR--T 123 Query: 111 PIILVGNKKD 120 P ++ NK D Sbjct: 124 PFVVAANKID 133 >5YMX-A nrPDB Length = 203 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 21/163 (12%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQ-----------FPEVYVPTVFENY--VADIEVD 49 I K+V G G CGKT L + ++ T+F ++ ++ E+ Sbjct: 10 EINCKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIR 68 Query: 50 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSI------DSPDSLENIPEKWTPEV 103 G + L+ GQ YD R L D ++ + +SLEN+ + Sbjct: 69 GFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRINLAEQ- 127 Query: 104 KHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRD 146 + +P ++ NK+DL N + + + Sbjct: 128 GYDLNKIPYVIQYNKRDLPNAVTVEEMRKALNHRNIPEYQAVA 170 >2E87-A nrPDB Length = 357 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 34/186 (18%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV---DGKQVELALWDTAGQ- 63 +VI G GK+ LL + + P I V + + DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP----FTTRGINVGQFEDGYFRYQIIDTPGLL 225 Query: 64 -----ED----YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPII 113 E + L Y ++I+ F + E H ++P + Sbjct: 226 DRPISERNEIEKQAILALRYLG-NLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKDLPFL 284 Query: 114 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 173 +V NK D+ ++E+ +R +K++ + P ++ SA G+ V E Sbjct: 285 VVINKIDVADEENIKRLEKFVKEKGLNP---------------IKISALKGTGIDLVKEE 329 Query: 174 ATRAAL 179 + Sbjct: 330 IIKTLR 335 >2DYK-A nrPDB Length = 161 Score = 44.4 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 47/126 (37%), Gaps = 21/126 (16%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYV-PTVFENYVADIEVDGKQVELALWDTAG--- 62 K+VIVG GK+ L K + V P V + + + V+ + L DT G Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRD-LKEGVVETDRGRFLLVDTGGLWS 61 Query: 63 --------QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIIL 114 QE DR D ++ F++D L + ++ P+IL Sbjct: 62 GDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PVIL 113 Query: 115 VGNKKD 120 V K D Sbjct: 114 VATKVD 119 >2QAG-A nrPDB Length = 361 Score = 44.0 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 10/76 (13%) Query: 8 LVIVGDGACGKTCLLIV-FSKDQFPEVYVPTVFENYVADIEVDGKQV---------ELAL 57 L++VG+ GK+ L+ F D +PE +P E ++++ V L + Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 99 Query: 58 WDTAGQEDYDRLRPLS 73 DT G D R Sbjct: 100 VDTPGYGDAINCRDCF 115 >3FTQ-A nrPDB Length = 274 Score = 44.0 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 10/76 (13%) Query: 8 LVIVGDGACGKTCLLIV-FSKDQFPEVYVPTVFENYVADIEVDGKQV---------ELAL 57 L++VG+ GK+ L+ F D +PE +P E ++++ V L + Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 67 Query: 58 WDTAGQEDYDRLRPLS 73 DT G D R Sbjct: 68 VDTPGYGDAINCRDCF 83 >4UJC-AB nrPDB Length = 627 Score = 43.6 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 68/228 (29%), Gaps = 53/228 (23%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD--------------IEVDGKQV 53 + ++G GKT +L + + + A D + V Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 54 EL---ALWDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + + DT G E + LR D+ ++ I P ++E+I Sbjct: 101 RIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIN-------LLKS 153 Query: 108 PNVPIILVGNKKDL----RNDEHTRRELAKMKQEPVKPEEGRDMANRI---------GAF 154 P I+ NK D + + KQ+ +E + A I A Sbjct: 154 KKCPFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAA 213 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQARRGKKKSGC 190 + E SA T DG+ + + Q K+ + C Sbjct: 214 LFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLVELT-QTMLSKRLAHC 260 >3GEE-A nrPDB Length = 476 Score = 43.6 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 12/121 (9%) Query: 9 VIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 VI G GK+ LL +++ ++P +Y+ + + K + L DTAG + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKTM-FRLTDTAGLREAG 295 Query: 68 ------RLRPLSYPDTDVILMCF--SIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 +R + L+ + + + + + E E+K P + V NK Sbjct: 296 EEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTE--IRELKAAHPAAKFLTVANKL 353 Query: 120 D 120 D Sbjct: 354 D 354 >5DN8-A nrPDB Length = 446 Score = 43.3 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 25/180 (13%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVP--TVFENYVADIEVDGKQVELALWDTAGQ 63 K+ ++G GK+ L+ ++ VY T ++ + + L DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLI--DTAGI 236 Query: 64 EDYDRLRPL--------SYPDTDVI-LMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIIL 114 +++ S ++ F +D+ + + + ++ I + Sbjct: 237 RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIAV 296 Query: 115 VGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMA 174 NK D N E + + + R ++ SA GV ++F Sbjct: 297 --NKWDGLNIEERDNVRNAIDRRMPFVDFARRY--------FI--SALHGTGVGKLFRAI 344 Score = 26.3 bits (57), Expect = 9.3, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 21/126 (16%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADI---EVDGKQVELALWDTAGQ 63 + IVG GK+ L +K + V V +D ++ L L DT G Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSR--AALVADVPGVTRDRQYGETTIDSQR--LLLVDTGGL 63 Query: 64 ED---------YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIIL 114 D + + ++D IL F +D+ L E ++ I L Sbjct: 64 VDTENKEVAPLAETQVEQAIDESDCIL--FLVDAKAGLVPADEIIAERLRKKGKK--IFL 119 Query: 115 VGNKKD 120 NK D Sbjct: 120 AVNKAD 125 >1MKY-A nrPDB Length = 439 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 56/180 (31%), Gaps = 34/180 (18%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQ--FPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 K+ IVG GK+ L + T + ++ +DG++ DTAG Sbjct: 181 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF--VDTAGL 238 Query: 64 EDYDRLRPLS------YPD------TDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVP 111 R+ P + Y DV+++ + ++ E + Sbjct: 239 RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRAS--- 295 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGY---MECSAKTKDGVR 168 ++V NK DL R + E + ++ Y + SA + Sbjct: 296 -VVVFNKWDLVVHREKRYD-----------EFTKLFREKLYFIDYSPLIFTSADKGWNID 343 Score = 40.6 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 60/188 (31%), Gaps = 46/188 (24%) Query: 8 LVIVGDGACGKTCLLIVFSKDQF--PEVYVPTVFENYVADIEVDGKQVELALWDTAG--- 62 ++IVG GK+ L K + E + +E GK +L DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKL--VDTCGVFD 61 Query: 63 ------QEDYDRLRPLSYPDTDVILMCFS----IDSPDSLENIPEKWTPEVKHFCPNVPI 112 + + + D++L I D E++ + V Sbjct: 62 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK------STVDT 113 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYME---CSAKTKDGVRE 169 ILV NK E + + VKPE + + G+ E SA+ + Sbjct: 114 ILVANKA----------ENLREFEREVKPE--------LYSLGFGEPIPVSAEHNINLDT 155 Query: 170 VFEMATRA 177 + E + Sbjct: 156 MLETIIKK 163 >3JB9-B nrPDB Length = 984 Score = 42.9 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 28/171 (16%) Query: 9 VIVGDGACGKTCLL------------------IVFSKDQFPE-VYVPTVFENYVADIEVD 49 ++ G GK+ LL + ++ + E V ++ + D Sbjct: 145 IVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSD 204 Query: 50 --GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF- 106 GK DT G D+ +D +++ + E + T +KH Sbjct: 205 MKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI-----EGVMINTTRIIKHAI 259 Query: 107 CPNVPIILVGNKKD-LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGY 156 ++PI+LV NK D L + A K V E ++ Y Sbjct: 260 LHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKY 310 >1ZUN-B nrPDB Length = 434 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 59/202 (29%), Gaps = 53/202 (26%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQF------------PEVYVPTVFENYVADIEVDGKQ 52 + + G+ GK+ L+ D T ++ + VDG Q Sbjct: 24 MLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQ 83 Query: 53 V--------------------ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSI------ 86 + + DT G E Y R D+ ++ Sbjct: 84 AEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVDARYGVQT 143 Query: 87 -DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGR 145 S +KH I++ NK DL + R +K + +K EG Sbjct: 144 QTRRHSYIAS----LLGIKH------IVVAINKMDLNGFDE--RVFESIKADYLKFAEG- 190 Query: 146 DMANRIGAFGYMECSAKTKDGV 167 +A + ++ SA D V Sbjct: 191 -IAFKPTTMAFVPMSALKGDNV 211 >3R9W-A nrPDB Length = 307 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 40/131 (30%), Gaps = 28/131 (21%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELAL--WDTAG-QE 64 + IVG GK+ LL + P + + V E + DT G E Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYE 70 Query: 65 DYDR---------LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNV----- 110 + S + DVIL E W P + N Sbjct: 71 PKKSDVLGHSMVEIAKQSLEEADVILFMIDAT---------EGWRPRDEEIYQNFIKPLN 121 Query: 111 -PIILVGNKKD 120 P+I+V NK D Sbjct: 122 KPVIVVINKID 132 >5KU1-A nrPDB Length = 424 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 15/128 (11%) Query: 6 KKLVIVGDGACGKT----CLLIVFS--KDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 + ++G CGK+ LL + + E + N + V G++ L L D Sbjct: 243 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 299 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 + E L DV+ + + + +P S E + +P ++V K Sbjct: 300 ISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAAKS 353 Query: 120 DLRNDEHT 127 DL + Sbjct: 354 DLHEVKQE 361 >5KH0-A nrPDB Length = 396 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 20/145 (13%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFP--EVYVPTVFENYVADIEV-DGKQVELALW 58 RK + I G GK+ + + T + +E+ + L Sbjct: 5 GGFRKYIAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLI-- 62 Query: 59 DTAGQEDYDRL--------RPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNV 110 DT G +D L + Y IL+ I P + E K E++ + Sbjct: 63 DTPGLDDVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKELE-----I 115 Query: 111 PIILVGNKKDLRNDEHTRRELAKMK 135 P + NK D + E+ +E K Sbjct: 116 PYFIAINKIDTIDHENIEKEYKKYN 140 >3EC1-A nrPDB Length = 369 Score = 41.3 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 11/79 (13%) Query: 100 TPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMEC 159 P + F + PI+LVGNK DL +L + R MA +G C Sbjct: 89 IPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRWM---------RRMAEELGLCPVDVC 139 Query: 160 --SAKTKDGVREVFEMATR 176 SA G+ +V E R Sbjct: 140 LVSAAKGIGMAKVMEAINR 158 >5KSO-A nrPDB Length = 190 Score = 41.3 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 15/128 (11%) Query: 6 KKLVIVGDGACGKT----CLLIVFS--KDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 + ++G CGK+ LL + + E + N + V G++ L L D Sbjct: 9 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 65 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 + E L DV+ + + + +P S E + +P ++V K Sbjct: 66 ISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAAKS 119 Query: 120 DLRNDEHT 127 DL + Sbjct: 120 DLHEVKQE 127 >4V7F-o nrPDB Length = 647 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 63/193 (32%), Gaps = 23/193 (11%) Query: 8 LVIVGDGACGKTCLLIVFSK-DQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG---- 62 L+I G GK+ L +K D + Y T YV D K + DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHF--DYKYLRFQAIDTPGILDR 227 Query: 63 -QEDYDRLRPLS-YPDTD---VILMCFSIDSPDSLE-NIPEKWTPEVKHFCPNVPIILVG 116 E+ + + S Y +L + K +K N +++V Sbjct: 228 PTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVI 287 Query: 117 NKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 NK D+ E E A++ + + M S + ++ V EV A Sbjct: 288 NKTDIIRPEDLDEERAQLLESV----------KEVPGVEIMTSSCQLEENVMEVRNKACE 337 Query: 177 AALQARRGKKKSG 189 L +R K Sbjct: 338 KLLASRIENKLKS 350 >6IAE-A nrPDB Length = 223 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 74/214 (34%), Gaps = 38/214 (17%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVF--SKDQFPEVYVPTVFENYVA-DIEVDG------- 50 M+ K++++G GK+ + ++D + Y T + +I +D Sbjct: 5 MSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQ 64 Query: 51 ----KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF 106 K+ + LWD G + P + D I+ F+ + S + + W Sbjct: 65 AAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELL-LWYKNFAL- 122 Query: 107 CPNVPIILVGNKKDLRNDEHTRREL-----------AKMKQEPVKPEEGRDMANRIGAFG 155 N+ +L +D + + + + + + V M ++ Sbjct: 123 ----------NQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIR 172 Query: 156 YMECSAKTK-DGVREVFEMATRAALQARRGKKKS 188 +E S + D +E F+ + +R +++ Sbjct: 173 ALETSLDYQSDNFKEAFDALVEQIIASRLAAEEN 206 >6GDG-D nrPDB Length = 248 Score = 40.6 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 17/127 (13%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +L+++G GK+ ++ + +VD +V ++D GQ D Sbjct: 37 RLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVD--KVNFHMFDVGGQRDE 94 Query: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENI--------PEKWTPEVKHFCPNVPIILVGNK 118 R + D I+ + L+ +W + +IL NK Sbjct: 95 RRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLR-------TISVILFLNK 147 Query: 119 KDLRNDE 125 +DL ++ Sbjct: 148 QDLLAEK 154 >4WQY-BZ nrPDB Length = 758 Score = 39.8 bits (92), Expect = 7e-04, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 24/146 (16%) Query: 17 GKTCLLIVFSK-----DQFPEVYVPTVFENYVADIEVDGKQVE------------LALWD 59 GKT + EV+ +++ G + + + D Sbjct: 91 GKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINIID 150 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 T G D+ S D ++ F S +E E + + + VP I NK Sbjct: 151 TPGHVDFTIEVERSMRVLDGAIVVFD--SSQGVEPQSETVWRQAEKY--KVPRIAFANKM 206 Query: 120 DLRNDE---HTRRELAKMKQEPVKPE 142 D + R ++ PV + Sbjct: 207 DKTGADLWLVIRTMQERLGARPVVMQ 232 >6D4G-A nrPDB Length = 271 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 19/113 (16%) Query: 78 DVILMCFSIDSP--DSLENIPEKWTPEVKHFCPNV--PIILVGNKKDLRNDEHTRRELAK 133 D L+ + + ++ K+ + + PI++V K D + + R Sbjct: 163 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVIVLTKCDEGVERYIR----- 216 Query: 134 MKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKK 186 + A +E SA++ V F + ++R K Sbjct: 217 ---------DAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSRGKTK 260 >5CYO-A nrPDB Length = 274 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 10/69 (14%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFP-EVYVPTVFENYVADIEV---------DGKQV 53 +++VG GK+ L+ K + + PT E IE+ G ++ Sbjct: 3 FEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRM 62 Query: 54 ELALWDTAG 62 +L + DT G Sbjct: 63 KLTVIDTPG 71 >6G79-A nrPDB Length = 225 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 33/203 (16%) Query: 2 AAIRKKLVIVGDGACGKTCLLIV---FSKDQFPEVYVPTVFENYVADIEVDGKQVELALW 58 AA KL+++G GK+ ++ + E + K + L+ Sbjct: 27 AAKDVKLLLLGADNSGKSTIVKQMKIIHGGSGGSGGTTGIVETHFTF-----KNLHFRLF 81 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSIDS----PDS---LENIPEKWTPEVKHFCPNVP 111 D GQ + + D I+ C + +S ++I F + Sbjct: 82 DVGGQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNN------KFFIDTS 135 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQE---PVKPEEGRDMAN--------RIGAFGYME-C 159 IIL NKKDL ++ + L E P E+ Y Sbjct: 136 IILFLNKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMT 195 Query: 160 SAKTKDGVREVFEMATRAALQAR 182 A + + +F+ T + Sbjct: 196 CATDTNNAQVIFDAVTDIIIANN 218 >3T5D-A nrPDB Length = 274 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 11/71 (15%) Query: 2 AAIRKKLVIVGDGACGKTCLLIV-FSKDQFPEVYVPTVFENYVADIEVD---------GK 51 + L++VG+ GK+ L+ F D + Y P ++V+ G Sbjct: 5 SGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEY-PGPSHRIKKTVQVEQSKVLIKEGGV 63 Query: 52 QVELALWDTAG 62 Q+ L + DT G Sbjct: 64 QLLLTIVDTPG 74 >4V8Y-CP nrPDB Length = 339 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 53/224 (23%) Query: 8 LVIVGDGACGKTCLLIVF----SKDQFPEVYVPTVFENY--------VADIEVDGKQVEL 55 I+G GKT LL + + Y + + ++ Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + DT G E + LR ++ ++ I ++E+I K + K Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRKA-- 123 Query: 108 PNVPIILVGNKKDLRND-----EHTRRELAKMKQEPVKPE-EGR------DMANR-IGAF 154 P ++ NK D D ++ R+ + V+ E + R ++A + + + Sbjct: 124 ---PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQARRGKK 186 Y + SA T +GV ++ Q R K+ Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 223 >2CXX-A nrPDB Length = 190 Score = 39.0 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 63/201 (31%), Gaps = 44/201 (21%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG----- 62 ++ G GK+ L+ + + P V IE++ K + + D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVT---RKIIEIEWKNHK--IIDMPGFGFMM 58 Query: 63 ------QEDYDRLRPLSY----PDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP---- 108 QE + DV ++ + I ++W + Sbjct: 59 GLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD---GKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 109 ------NVPIILVGNKKD-LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSA 161 ++P I+ NK D ++N + LA+ + P+ + ++ SA Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEID----------KVFIPISA 165 Query: 162 KTKDGVREVFEMATRAALQAR 182 K D + + + + Sbjct: 166 KFGDNIERLKNRIFEVIRERQ 186 >3LLU-A nrPDB Length = 196 Score = 38.6 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 24/188 (12%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG----KQVELALWDT 60 + +++++G GK+ + V P T+F I D V +WD Sbjct: 20 KPRILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDF 76 Query: 61 AGQEDYDRLRPLS---YPDTDVILMCFSIDSPDSL-ENIPEKWTPEVKHF--CPNVPIIL 114 GQ D+ + T + + ID+ D E + K + P++ + Sbjct: 77 PGQMDFFDPTFDYEMIFRGTGA--LIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEV 134 Query: 115 VGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMAN---RIGAFGYMECSAKTKDGVREVF 171 +K D +D+H Q + D+A+ + S + E F Sbjct: 135 FIHKVDGLSDDHKIE-----TQRDIHQRANDDLADAGLEKLHLSFYLTSIYD-HSIFEAF 188 Query: 172 EMATRAAL 179 + + Sbjct: 189 SKVVQKLI 196 >2Q3F-A nrPDB Length = 181 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 60/191 (31%), Gaps = 24/191 (12%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG----KQVELAL 57 ++ +++++G GK+ + V P T+F I + V + Sbjct: 1 GEVKPRILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKICREDVSNSSFVNFQI 57 Query: 58 WDTAGQEDYDRLRPLS---YPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF---CPNVP 111 WD GQ D+ + T ++ IDS D + V ++ Sbjct: 58 WDFPGQIDFFDPTFDYEMIFRGTGALIFV--IDSQDDYMEALARLHLTVTRAYKVNTDIN 115 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMAN---RIGAFGYMECSAKTKDGVR 168 + +K D +D+H Q + D+A+ + S + Sbjct: 116 FEVFIHKVDGLSDDHKIE-----TQRDIHQRANDDLADAGLEKIHLSFYLTSIYD-HSIF 169 Query: 169 EVFEMATRAAL 179 E F + + Sbjct: 170 EAFSKVVQKLI 180 >5A9Z-CA nrPDB Length = 593 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 27/134 (20%) Query: 6 KKLVIVGDGACGKTCLLIVFSK--DQFPEVYVP----------------TVFENYVADIE 47 + + I+ GKT L+ + F T+ A I+ Sbjct: 6 RNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIK 65 Query: 48 VDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLEN-IPEKWTPEVKHF 106 D + + DT G D+ D +L+ + + +P+ K F Sbjct: 66 WD---YRINIVDTPGHADFGGEVERVMSMVDSVLLVVD-----AFDGPMPQTRFVTKKAF 117 Query: 107 CPNVPIILVGNKKD 120 + I+V NK D Sbjct: 118 AYGLKPIVVINKVD 131 >4NCF-A nrPDB Length = 457 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 53/224 (23%) Query: 8 LVIVGDGACGKTCLLIVF----SKDQFPEVYVPTVFENY--------VADIEVDGKQVEL 55 I+G GKT LL + + Y + + ++ Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + DT G E + LR ++ ++ I ++E+I K + K Sbjct: 73 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRKA-- 128 Query: 108 PNVPIILVGNKKDLRND-----EHTRRELAKMKQEPVKPE-EGR------DMANR-IGAF 154 P ++ NK D D ++ R+ + V+ E + R ++A + + + Sbjct: 129 ---PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 185 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQARRGKK 186 Y + SA T +GV ++ Q R K+ Sbjct: 186 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 228 >3WBI-A nrPDB Length = 606 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 53/224 (23%) Query: 8 LVIVGDGACGKTCLLIVF----SKDQFPEVYVPTVFENY--------VADIEVDGKQVEL 55 I+G GKT LL + + Y + + ++ Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + DT G E + LR ++ ++ I ++E+I K + K Sbjct: 72 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRKA-- 127 Query: 108 PNVPIILVGNKKDLRND-----EHTRRELAKMKQEPVKPE-EGR------DMANR-IGAF 154 P ++ NK D D ++ R+ + V+ E + R ++A + + + Sbjct: 128 ---PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 184 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQARRGKK 186 Y + SA T +GV ++ Q R K+ Sbjct: 185 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 227 >4V8Z-CV nrPDB Length = 586 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 53/224 (23%) Query: 8 LVIVGDGACGKTCLLIVF----SKDQFPEVYVPTVFENY--------VADIEVDGKQVEL 55 I+G GKT LL + + Y + + ++ Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSID---SPDSLENIPEKWTPEVKHFC 107 + DT G E + LR ++ ++ I ++E+I K + K Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRKA-- 123 Query: 108 PNVPIILVGNKKDLRND-----EHTRRELAKMKQEPVKPE-EGR------DMANR-IGAF 154 P ++ NK D D ++ R+ + V+ E + R ++A + + + Sbjct: 124 ---PFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 155 GYME------------CSAKTKDGVREVFEMATRAALQARRGKK 186 Y + SA T +GV ++ Q R K+ Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 223 >4ZU9-A nrPDB Length = 582 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 22/166 (13%) Query: 12 GDGACGKTCLLIVFS---KDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYD 67 G GKT L+ + D+ PE + + A I+ L + D G E + Sbjct: 10 GHVDHGKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFAYIDFPDINTRLEIIDVPGHERFI 69 Query: 68 RLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 124 + +++ + P ++E++ + +KH I V K D ++ Sbjct: 70 KNAIAGICSASGLILVVDPNEGIMPQTIEHLRVAKSFGIKHG------IAVLTKMDKVDE 123 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 E ++E + E +M I ++ SA T G+ ++ Sbjct: 124 E----LAHIAEEELIAFLEKEEMNMEI-----VKVSAVTGQGIEDL 160 >5KUT-A nrPDB Length = 189 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 43/128 (33%), Gaps = 18/128 (14%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVF----SKDQFPEVYVPTVFENYVADIEVDGKQVELAL 57 + + K+V G GK+ L F Q P + ++V+G++ L L Sbjct: 8 SVLLCKVV--GACGVGKSAFLQAFLGRGLGHQDTREQPPGYAID---TVQVNGQEKYLIL 62 Query: 58 WD--TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 115 + T G L DV + F P S + + + P + V Sbjct: 63 CEVGTDGL-LATSLDATC----DVACLMFDGSDPKSFAHCASVYKHH--YMDGQTPCLFV 115 Query: 116 GNKKDLRN 123 +K DL Sbjct: 116 SSKADLPE 123 >3IEU-A nrPDB Length = 301 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 49/192 (25%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELA-------LW-D 59 + IVG GK+ LL + + + V + ++ D Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQK--------ISITSRKAQTTRHRIVGIHTEGAYQAIYVD 62 Query: 60 TAGQ--EDYDRL-----RPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-----KHFC 107 T G E+ + + S DV L+ F ++ +WTP+ K Sbjct: 63 TPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVE--------GTRWTPDDEMVLNKLRE 114 Query: 108 PNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGV 167 P+IL NK D ++ + +A+++ + SA+T V Sbjct: 115 GKAPVILAVNKVDNVQEKADLLPHLQF------------LASQMNFLDIVPISAETGLNV 162 Query: 168 REVFEMATRAAL 179 + R L Sbjct: 163 DTI-AAIVRKHL 173 >2QAG-C nrPDB Length = 418 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 11/65 (16%) Query: 8 LVIVGDGACGKTCLLIV-FSKDQFPEVYVPTVFENYVADIEVD---------GKQVELAL 57 L++VG+ GK+ L+ F D + Y P ++V+ G Q+ L + Sbjct: 34 LMVVGESGLGKSTLINSLFLTDLYSPEY-PGPSHRIKKTVQVEQSKVLIKEGGVQLLLTI 92 Query: 58 WDTAG 62 DT G Sbjct: 93 VDTPG 97 >3C5H-A nrPDB Length = 255 Score = 37.5 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 32/105 (30%), Gaps = 19/105 (18%) Query: 78 DVILMCFSIDSP--DSLENIPEKWTPEVKHFCPNV--PIILVGNKKDLRNDEHTRRELAK 133 D L+ + + ++ K+ + + PI++V K D + + R Sbjct: 164 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYIR----- 217 Query: 134 MKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 178 + A +E SA++ V F + Sbjct: 218 ---------DAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 >3PR1-A nrPDB Length = 195 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 67/188 (35%), Gaps = 36/188 (19%) Query: 4 IRKKLVIVGDGACGKTCLLIVFSKDQ--FPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++ ++ VG GK+ LL + F T + + + + D Sbjct: 22 LKGEVAFVGRSNVGKSSLLNALFNRKIAFVSK---TPGKTRSINFYLVNSKYYF--VDLP 76 Query: 62 G--------QED--YDRLRPLSYPDT----DVILMCFSIDSPDSLENIPEKWTPEVKHFC 107 G +E + RL + + V L+ P + + +W + Sbjct: 77 GYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSL---- 132 Query: 108 PNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGV 167 N+P +V K D KM + K EE R + ++ G + + S+ T +G+ Sbjct: 133 -NIPFTIVLTKMD----------KVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGI 181 Query: 168 REVFEMAT 175 E+ ++ + Sbjct: 182 SELLDLIS 189 >2GTP-A nrPDB Length = 323 Score = 37.1 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 54/190 (28%), Gaps = 46/190 (24%) Query: 32 EVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83 Y+PT + ++ G K + ++D GQ + + I+ C Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193 Query: 84 FSIDS--------------PDS---LENI-PEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 ++ +S ++I KW + IIL NKKDL ++ Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFT-------DTSIILFLNKKDLFEEK 246 Query: 126 HTRRELAKMKQE---PVKPEEGRDMA----------NRIGAFGYMECSAKTKDGVREVFE 172 + L E EE A V+ VF+ Sbjct: 247 IKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFD 306 Query: 173 MATRAALQAR 182 T ++ Sbjct: 307 AVTDVIIKNN 316 >2P8Y-T nrPDB Length = 842 Score = 37.1 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 55/179 (30%), Gaps = 45/179 (25%) Query: 1 MAAIRKKLV------IVGDGACGKTCLLI-----------------VFSKDQFPEVYVP- 36 M ++ K+ ++ GK+ L F+ + E Sbjct: 9 MRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGI 68 Query: 37 TV-------------FENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83 T+ + + DG + L D+ G D+ + TD L+ Sbjct: 69 TIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVV 128 Query: 84 FSIDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKD--LRNDEHTRRELAKMKQEPV 139 ++E + + ++ + ++V NK D L + ++ +L + V Sbjct: 129 VD-----TIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTV 182 >6CES-C nrPDB Length = 399 Score = 36.7 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 24/190 (12%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG----KQVELALW 58 + + +++++G GK + V P T+F I D V +W Sbjct: 59 SSKPRILLMGLRRSGKNSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIW 115 Query: 59 DTAGQEDYDRLRPLS---YPDTDVILMCFSIDSPDSL-ENIPEKWTPEVKHF--CPNVPI 112 D GQ D+ + T + + ID+ D E + K + P++ Sbjct: 116 DFPGQMDFFDPTFDYEMIFRGTGA--LIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNF 173 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMAN---RIGAFGYMECSAKTKDGVRE 169 + +K D +D+H Q + D+A+ + S + E Sbjct: 174 EVFIHKVDGLSDDHKIE-----TQRDIHQRANDDLADAGLEKLHLSFYLTSIYD-HSIFE 227 Query: 170 VFEMATRAAL 179 F + + Sbjct: 228 AFSKVVQKLI 237 >1HEY-A nrPDB Length = 128 Score = 36.3 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 6/97 (6%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A K ++VG+G GK+ + + + F V + + ++ G ++ W+ Sbjct: 1 ADKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMP 60 Query: 62 ---GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENI 95 G E +R L + + ENI Sbjct: 61 NMDGLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >4AC9-A nrPDB Length = 482 Score = 36.3 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 57/177 (32%), Gaps = 19/177 (10%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFS-------KDQFPEVYVPTVFENYVADIEVDGKQV 53 M L I G GKT L V + D+ PE + + + + Sbjct: 15 MDFKNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITID-IGFSAFKLENY 73 Query: 54 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 113 + L D G D R + D+ L+ + + HF N+PII Sbjct: 74 RITLVDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILD--HF--NIPII 129 Query: 114 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 +V K D E +R MK + + SAKT GV E+ Sbjct: 130 VVITKSDNAGTEEIKRTEMIMKSILQSTH-------NLKNSSIIPISAKTGFGVDEL 179 >3V00-C nrPDB Length = 356 Score = 35.9 bits (82), Expect = 0.010, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 58/195 (29%), Gaps = 54/195 (27%) Query: 31 PEVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILM 82 YVPT + + ++ G K + ++D GQ + + I+ Sbjct: 166 TPGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIF 225 Query: 83 CFSIDS--------------PDS---LENI-PEKWTPEVKHFCPNVPIILVGNKKDLRND 124 C ++ +S +I KW + IIL NKKDL + Sbjct: 226 CVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFT-------DTSIILFLNKKDLFEE 278 Query: 125 EHTRRELAKMKQE---PVKPEEGRDMANRIGAFGYME--------------CSAKTKDGV 167 + + L E EE + ++E A V Sbjct: 279 KIKKSPLTICYPEYAGSNTYEEAGNYIK----VQFLELNMRRDVKEIYSHMTCATDTQNV 334 Query: 168 REVFEMATRAALQAR 182 + VF+ T ++ Sbjct: 335 KFVFDAVTDIIIKEN 349 >5ZZM-A nrPDB Length = 426 Score = 35.9 bits (82), Expect = 0.011, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 31/181 (17%) Query: 8 LVIVGDGACGKTCLLIVFSKDQF--PEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 + +VG GK+ L ++ + + T+ D + LA DT G Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLA--DTVGFIR 257 Query: 66 ---------YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVG 116 + ++L ENI T + +P +LV Sbjct: 258 HLPHDLVAAFKA-TLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316 Query: 117 NKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 NK D+ D R + EE + + SA+T G+ ++F+ T Sbjct: 317 NKIDMLEDFEPRIDRD---------EENKPNRVWL--------SAQTGAGIPQLFQALTE 359 Query: 177 A 177 Sbjct: 360 R 360 >4YMS-J nrPDB Length = 240 Score = 35.6 bits (81), Expect = 0.013, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELA 56 +VI+G GK+ LL + PT E ++ ++++ +V + Sbjct: 30 VVIIGPSGSGKSTLLRCI-----NLLEEPTKGEVFIDGVKINNGKVNIN 73 >2ODE-A nrPDB Length = 350 Score = 35.6 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 55/193 (28%), Gaps = 46/193 (23%) Query: 32 EVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83 Y+PT + ++ G K + ++D GQ + + I+ C Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 84 FSIDS--------------PDS---LENI-PEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 ++ +S ++I KW E IIL NKKDL ++ Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTE-------TSIILFLNKKDLFEEK 276 Query: 126 HTRRELAKMKQE---PVKPEEGRDMA----------NRIGAFGYMECSAKTKDGVREVFE 172 R L E EE A V+ VF+ Sbjct: 277 IKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFD 336 Query: 173 MATRAALQARRGK 185 T ++ + Sbjct: 337 AVTDVIIKNNLKE 349 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 14/23 (60%) Query: 2 AAIRKKLVIVGDGACGKTCLLIV 24 AA KL+++G G GK+ ++ Sbjct: 29 AAKEVKLLLLGAGESGKSTIVKQ 51 >6ID0-C nrPDB Length = 972 Score = 34.8 bits (79), Expect = 0.022, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 44/141 (31%), Gaps = 27/141 (19%) Query: 2 AAIRKKLVIVGDGACGKTCLL------------------IVFSKDQFPEVYVPTVFENYV 43 + + + + + G GKTC + + ++ F E ++ Sbjct: 126 SELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTP 185 Query: 44 ADIEVD---GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWT 100 + + GK + DT G ++ +D +++ E + Sbjct: 186 VTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAA-----EGVMLNTE 240 Query: 101 PEVKHFC-PNVPIILVGNKKD 120 +KH + + + NK D Sbjct: 241 RLIKHAVQERLAVTVCINKID 261 >5TY0-A nrPDB Length = 422 Score = 34.8 bits (79), Expect = 0.022, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 11/90 (12%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSI---DSPDSLENIPEKWTPEVKHFC 107 + + + DT G D+ S D ++ F P S W K+ Sbjct: 81 ESHRINIIDTPGHVDFMIEVERSLRVLDGAVVVFDSVAGVEPQS----ETVWRQANKYGV 136 Query: 108 PNVPIILVGNKKDLRNDEHTRRELAKMKQE 137 P + + NK D R + R ++++KQ Sbjct: 137 PRIVFV---NKMD-RMGANFLRVVSQIKQR 162 >5H7J-A nrPDB Length = 743 Score = 34.4 bits (78), Expect = 0.031, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 37/127 (29%), Gaps = 29/127 (22%) Query: 16 CGKTCLLIVFSKDQ---------------FPEVYVP---TVFENYVADI-EVDGKQVELA 56 GKT L F E T+ V+ + +GK + Sbjct: 35 HGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLIN 94 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPII 113 L DT G D+ + D +++ P + + + VK + Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP-------V 147 Query: 114 LVGNKKD 120 L NK D Sbjct: 148 LFINKVD 154 >6F1T-i nrPDB Length = 492 Score = 34.0 bits (77), Expect = 0.037, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 10/94 (10%) Query: 86 IDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD----LRNDEHTRRELAKMKQEPVKP 141 + S EN+ V +P+++V K D L + R E Q + Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-- 258 Query: 142 EEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 R + GA + S K + + +++ Sbjct: 259 ---RRFCLQYGAAL-IYTSVKEEKNLDLLYKYIV 288 >6N0I-A nrPDB Length = 706 Score = 34.0 bits (77), Expect = 0.039, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 11/89 (12%) Query: 52 QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCP 108 + + DT G D+ S D ++ FS P S W K+ P Sbjct: 85 KYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQS----ETVWRQANKYHVP 140 Query: 109 NVPIILVGNKKDLRNDEHTRRELAKMKQE 137 + I NK D R R + ++ Q Sbjct: 141 RLAYI---NKMD-RQGADFLRVVKQIDQR 165 >3K53-A nrPDB Length = 271 Score = 34.0 bits (77), Expect = 0.040, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 32/178 (17%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + +VG+ GKT + + + P V I + ++ E + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIM-EYREKEFLVVDLPG---IY 61 Query: 68 RLRPLSYP---------DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVP-IILVGN 117 L S D + ++ I + ++ F V IILV N Sbjct: 62 SLTAHSIDELIARNFILDGNADVIV-DIVDS---TCLMRNLFLTLELFEMEVKNIILVLN 117 Query: 118 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 K DL + + ++ KM++E + +AK +GV E+ M Sbjct: 118 KFDLLKKKGAKIDIKKMRKEL--------------GVPVIPTNAKKGEGVEELKRMIA 161 >3H2Y-A nrPDB Length = 368 Score = 34.0 bits (77), Expect = 0.041, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 11/75 (14%) Query: 98 KWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFG-- 155 W P + F N ++LVGNK DL ++ + A ++G Sbjct: 85 SWLPGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYS---------AKQLGLKPED 135 Query: 156 YMECSAKTKDGVREV 170 SA G+ E+ Sbjct: 136 VFLISAAKGQGIAEL 150 Score = 31.3 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELA----LWDTAG 62 + +VG GK+ + K +F + + ++ +D + L L+DT G Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVITTSHFPGTTLDLIDIPLDEESSLYDTPG 220 >5H7K-A nrPDB Length = 397 Score = 34.0 bits (77), Expect = 0.046, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 37/127 (29%), Gaps = 29/127 (22%) Query: 16 CGKTCLLIVFSKDQ---------------FPEVYVP---TVFENYVADI-EVDGKQVELA 56 GKT L F E T+ V+ + +GK + Sbjct: 35 HGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLIN 94 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPII 113 L DT G D+ + D +++ P + + + VK + Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP-------V 147 Query: 114 LVGNKKD 120 L NK D Sbjct: 148 LFINKVD 154 >5NON-A nrPDB Length = 165 Score = 33.6 bits (76), Expect = 0.053, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 51 KL I+GDG G T L + F +FP Y I VD + Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEYKE-------KFILVDNE 87 >2VNE-A nrPDB Length = 201 Score = 33.6 bits (76), Expect = 0.053, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 51 KL I+GDG G T L + F +FP Y I VD + Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEYKE-------KFILVDNE 103 >1SHZ-A nrPDB Length = 340 Score = 33.6 bits (76), Expect = 0.054, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 10/65 (15%) Query: 2 AAIRKKLVIVGDGACGKTCLL--IVFSKDQ-FP----EVYVPTVFENYVA--DIEVDGKQ 52 AA KL+++G G GK+ L + Q F E + PT++ N + + VD ++ Sbjct: 9 AAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE 68 Query: 53 VELAL 57 +L + Sbjct: 69 -KLHI 72 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 38/163 (23%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS--------PDS---------LE 93 K + ++D GQ + + I+ C ++ + + Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQTNRMHESMKLFD 237 Query: 94 NI-PEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQE---PVKPEEGRDMA- 148 +I KW + IIL NKKDL ++ + L E EE Sbjct: 238 SICNNKWFT-------DTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQ 290 Query: 149 ---------NRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 182 A V+ VF+ T ++ Sbjct: 291 CQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNN 333 >6F1Y-j nrPDB Length = 337 Score = 33.6 bits (76), Expect = 0.056, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 10/94 (10%) Query: 86 IDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD----LRNDEHTRRELAKMKQEPVKP 141 + S EN+ V +P+++V K D L + R E Q + Sbjct: 165 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-- 222 Query: 142 EEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 R + GA + S K + + +++ Sbjct: 223 ---RRFCLQYGAAL-IYTSVKEEKNLDLLYKYIV 252 >4V7D-BZ nrPDB Length = 711 Score = 33.2 bits (75), Expect = 0.062, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 10/73 (13%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSI---DSPDSLENIPEKWTPEVKHFC 107 + + + DT G D+ S D +M + P S W K+ Sbjct: 79 EPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQS----ETVWRQANKYKV 134 Query: 108 PNVPIILVGNKKD 120 P + + NK D Sbjct: 135 PRIAFV---NKMD 144 >5IRR-A nrPDB Length = 308 Score = 33.2 bits (75), Expect = 0.074, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 6 KKLVIVGDGACGKTCLLIVFSK 27 KL++VGD GKT L+ Sbjct: 27 IKLIVVGDSGLGKTTLIKSLIS 48 >1U0L-A nrPDB Length = 301 Score = 32.9 bits (74), Expect = 0.084, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 15/95 (15%) Query: 76 DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMK 135 + D +++ ++ P++ I +K+ V + ++V NK DL +++ R+ + Sbjct: 84 NVDQVILVVTVKMPETSTYIIDKFL--VLAEKNELETVMVINKMDLYDEDDLRKVRELEE 141 Query: 136 QEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 G + ++ SAKT G+ E+ Sbjct: 142 IYS-------------GLYPIVKTSAKTGMGIEEL 163 >2YYZ-A nrPDB Length = 359 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ 52 + ++G CGKT L++ + +Y PT E Y D+ V+ Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVNDIP 71 >4Z54-A nrPDB Length = 287 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 10/67 (14%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFP---------EVYVPTVFENYVAD-IEVDGKQVEL 55 +++VG GK+ L+ K Q E TV + IE G +++L Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 56 ALWDTAG 62 + DT G Sbjct: 80 TVIDTPG 86 >4V89-AW nrPDB Length = 534 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 52 QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVP 111 + L DT G ED+ + D LM ID+ +E+ K + + P Sbjct: 81 DCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMV--IDAAKGVEDRTRKLMEVTRLR--DTP 136 Query: 112 IILVGNKKD 120 I+ NK D Sbjct: 137 ILTFMNKLD 145 >5W75-A nrPDB Length = 392 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 52/153 (33%), Gaps = 28/153 (18%) Query: 11 VGDGACGKTCLLIVFSK----------------DQFPEVYVPTVFENYVADIEVDGKQVE 54 +G GK+ L +K D+ PE + N + +E + ++ Sbjct: 10 IGHVDHGKSTLTAAITKYLSLKGLAQYVPYDQIDKAPEEKARGITIN-ITHVEYETEKRH 68 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVP 111 A D G DY + D ++ + P + E++ + VP Sbjct: 69 YAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHV-------LLARQVGVP 121 Query: 112 IILV-GNKKDLRNDEHTRRELAKMKQEPVKPEE 143 ++V NK D+ +D + ++ + E Sbjct: 122 YMIVFINKTDMVDDPELIELVEMEVRDLLSQYE 154 >1ZCB-A nrPDB Length = 362 Score = 32.1 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Query: 7 KLVIVGDGACGKTCLL--IVFSKDQ-FP----EVYVPTVFENYVA--DIEVDGKQVELAL 57 K++++G G GK+ L + Q F E + PT++ N + + VD ++ +L + Sbjct: 35 KILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE-KLHI 93 >1SUL-A nrPDB Length = 195 Score = 32.1 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 40/160 (25%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG----- 62 + + G GK+ + + + + + + L D G Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDE--LHFVDVPGYGFAK 83 Query: 63 -----QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN-------- 109 +E + R+ I + + L+ + + +++H N Sbjct: 84 VSKSEREAWGRMIETY------------ITTREELKAVVQ--IVDLRHAPSNDDVQMYEF 129 Query: 110 -----VPIILVGNKKDLRNDEHTRRELAKMKQE-PVKPEE 143 +P+I++ K D + ++Q + PE+ Sbjct: 130 LKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPED 169 >5X4B-A nrPDB Length = 162 Score = 32.1 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 19/161 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE--LALWDTAG--- 62 + IVG GK+ + + ++ V T I + + L DT G Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVT-RDRIYSSAEWLNYDFNLIDTGGIDI 62 Query: 63 -----QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 117 + ++ + DVI+ F ++ + + E+ + + P++L N Sbjct: 63 GDEPFLAQIRQQAEIAMDEADVII--FMVNGREGVTAADEEVAKIL--YRTKKPVVLAVN 118 Query: 118 KKD---LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFG 155 K D +R + + L + P+ G + + + A Sbjct: 119 KLDNTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVA 159 >5TV2-A nrPDB Length = 405 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 10/82 (12%) Query: 42 YVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCF---SIDSPDSLENIPEK 98 + +E + + + DT G D+ S D ++ F S P S Sbjct: 71 FWRGMEAQFQDHRVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQS----ETV 126 Query: 99 WTPEVKHFCPNVPIILVGNKKD 120 W K+ P + + NK D Sbjct: 127 WRQADKYHVPRMVFV---NKMD 145 >4U00-A nrPDB Length = 244 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 KLVI+G GK+ L+ ++ + + ++ VDG V+ Sbjct: 32 KLVIIGPSGSGKSTLIRTINR----------LEDFQEGEVVVDGLSVK 69 >5OCH-A nrPDB Length = 612 Score = 31.7 bits (71), Expect = 0.19, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 30/78 (38%) Query: 8 LVIVGDGACGKT---CLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 + +VG GKT LL F Y PT + +DG+ Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV-----VMLDGR------------- 427 Query: 65 DYDRLRPLSYPD-TDVIL 81 D L P + Sbjct: 428 DLRTLDPSWLRGQVVGFI 445 >4DCU-A nrPDB Length = 456 Score = 31.7 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 19/161 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE--LALWDTAG--- 62 + IVG GK+ + + ++ V T I + + L DT G Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVT-RDRIYSSAEWLNYDFNLIDTGGIDI 83 Query: 63 -----QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 117 + ++ + DVI+ F ++ + + E+ + + P++L N Sbjct: 84 GDEPFLAQIRQQAEIAMDEADVII--FMVNGREGVTAADEEVAKIL--YRTKKPVVLAVN 139 Query: 118 KKD---LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFG 155 K D +R + + L + P+ G + + + A Sbjct: 140 KLDNTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVA 180 Score = 30.9 bits (69), Expect = 0.32, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 25/181 (13%) Query: 9 VIVGDGACGKTCLLIVFSKDQ--FPEVYVPTVFENYVADIEVDGKQVELALWDTAG---- 62 ++G GK+ L+ ++ T + + ++ + DTAG Sbjct: 199 CLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE--FVIVDTAGMRKK 256 Query: 63 ------QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVG 116 E Y LR L D ++ + + +K H +I+V Sbjct: 257 GKVYETTEKYSVLRALKAIDRSEVVAV--VLDGEEGIIEQDKRIAGYAHEAGKAVVIVV- 313 Query: 117 NKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 NK D + + + + + E RD + + SA TK + + + Sbjct: 314 NKWDAVDKDESTMKEFE--------ENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIK 365 Query: 177 A 177 A Sbjct: 366 A 366 >6B8D-A nrPDB Length = 408 Score = 31.3 bits (70), Expect = 0.24, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 11/87 (12%) Query: 54 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSI---DSPDSLENIPEKWTPEVKHFCPNV 110 + + DT G D+ S D +M + P S W K+ P + Sbjct: 86 RINVIDTPGHVDFTVEVERSMRVLDGAVMVYCAVGGVQPQS----ETVWRQANKYEVPRI 141 Query: 111 PIILVGNKKDLRNDEHTRRELAKMKQE 137 + NK D R + R + ++K Sbjct: 142 AFV---NKMD-RTGANFLRVVEQLKTR 164 >1WDT-A nrPDB Length = 665 Score = 31.3 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 39/243 (16%), Positives = 73/243 (30%), Gaps = 68/243 (27%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEV-----YVPTVFENYVADIEVDGKQV--- 53 A IR + +VG GKT L + T +Y + ++ V Sbjct: 7 AMIRT-VALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTG 65 Query: 54 ---------ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEK-WTPEV 103 + L D G D+ + D L+ ++ + ++ E+ WT Sbjct: 66 VAPLLFRGHRVFLLDAPGYGDFVGEIRGALEAADAALV--AVSAEAGVQVGTERAWTVAE 123 Query: 104 KHFCPNVPII-----------LV-------------------GNK----KDLRNDEHTRR 129 + P + ++ L+ G K D+ + + R Sbjct: 124 RLGLPRMVVVTKLDKGGDYYALLEDLRSTLGPILPIDLPLYEGGKWVGLIDVFHGKAYRY 183 Query: 130 ELAKMKQEPVKPEEGRDM-------------ANRIGAFGYMECSAKTKDGVREVFEMATR 176 E + ++ V PEE + + Y+E T + + + F A R Sbjct: 184 ENGEEREAEVPPEERERVQRFRQEVLEAIVETDEGLLEKYLEGEEVTGEALEKAFHEAVR 243 Query: 177 AAL 179 L Sbjct: 244 RGL 246 >1JNY-A nrPDB Length = 435 Score = 31.3 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 55/200 (27%), Gaps = 44/200 (22%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVP------------------------------- 36 L+++G GK+ L+ D+ Sbjct: 9 LIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERER 68 Query: 37 --TVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPD---- 90 T+ ++ K+ + D G D+ + D ++ S + Sbjct: 69 GVTINLTFMRFET---KKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAG 125 Query: 91 -SLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMAN 149 S+E + K + I+ V NK DL + + ++ + K R Sbjct: 126 MSVEGQTREHIILAKTMGLDQLIVAV-NKMDLTEPPYDEKRYKEIVDQVSKF--MRSYGF 182 Query: 150 RIGAFGYMECSAKTKDGVRE 169 ++ A + D + Sbjct: 183 NTNKVRFVPVVAPSGDNITH 202 >4FN5-A nrPDB Length = 709 Score = 31.3 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 11/90 (12%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFC 107 + + DT G D+ S D ++ F S P S W K+ Sbjct: 83 DNYRVNVIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQS----ETVWRQANKYGV 138 Query: 108 PNVPIILVGNKKDLRNDEHTRRELAKMKQE 137 P + + NK D R + R + ++K+ Sbjct: 139 PRIVYV---NKMD-RQGANFLRVVEQIKKR 164 >4MKI-B nrPDB Length = 298 Score = 31.3 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 10 IVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 55 I+G GK+ L+ + P+ + Y+ I++ K+V L Sbjct: 42 IIGHTGSGKSTLIQQL-----NGLLKPSKGKIYINGIDITDKKVSL 82 >6HZK-A nrPDB Length = 333 Score = 31.3 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 3/24 (12%) Query: 7 KLVIVG---DGACGKTCLLIVFSK 27 ++V++G D CGK+ L + Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLAD 29 >1YE8-A nrPDB Length = 178 Score = 31.3 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 12/21 (57%) Query: 7 KLVIVGDGACGKTCLLIVFSK 27 K++I G+ GKT L+ + Sbjct: 2 KIIITGEPGVGKTTLVKKIVE 22 >1PUJ-A nrPDB Length = 282 Score = 30.9 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 3/57 (5%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 + +I+G GK+ L+ +K + ++V + L L DT G Sbjct: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKE---LELLDTPG 174 >3TR5-A nrPDB Length = 528 Score = 30.9 bits (69), Expect = 0.31, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 38/122 (31%), Gaps = 8/122 (6%) Query: 3 AIRKKLVIVG----DGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALW 58 + +KL++ G K+ + + E+ + ++ K + L Sbjct: 28 TLTEKLLLFGGAIQLAGTIKSRKAARHATSDWMELEKQRGISVTTSVMQFPYKDYLINLL 87 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 118 DT G D+ + D LM I ++H PI+ NK Sbjct: 88 DTPGHADFTEDTYRTLTAVDSALMVIDAAKGVEPRTIKLMEVCRLRH----TPIMTFINK 143 Query: 119 KD 120 D Sbjct: 144 MD 145 >6NOT-A nrPDB Length = 707 Score = 30.9 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 35/124 (28%), Gaps = 27/124 (21%) Query: 17 GKTCLLIVFS-----KDQFPEVYVPTVFENYVADIEVDGKQVE------------LALWD 59 GKT + EV+ +++ + G + + + D Sbjct: 30 GKTTTTERILYYTGKSHKIGEVHEGGATMDWMEQEQERGITITSAATTCRWQDKVINIID 89 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFS---IDSPDSLENIPEKWTPEVKHFCPNVPIILVG 116 T G D+ S D + F P S W K+ P + + Sbjct: 90 TPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQS----ETVWRQADKYNVPRMCFV--- 142 Query: 117 NKKD 120 NK D Sbjct: 143 NKMD 146 >5AR1-A nrPDB Length = 303 Score = 30.9 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 15/75 (20%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD------------ 49 I ++IVG G++ + Q + T+ E+D Sbjct: 24 GGITFTVMIVGQSGSGRSTFINTLCGQQVVDTS-TTILLPTDTSTEIDLQLREETVELED 82 Query: 50 --GKQVELALWDTAG 62 G +++L + DT G Sbjct: 83 DEGVKIQLNIIDTPG 97 >4TLD-A nrPDB Length = 253 Score = 30.6 bits (68), Expect = 0.40, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 19/53 (35%) Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++ G GKT I F + E P VF + + K WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95 >3S1A-A nrPDB Length = 525 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 19/53 (35%) Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++ G GKT I F + E P VF + + K WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95 >5B3F-A nrPDB Length = 343 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 1/32 (3%) Query: 10 IVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN 41 + GD GK+ D F E V ++ + Sbjct: 42 VAGDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >1QVR-A nrPDB Length = 854 Score = 30.6 bits (68), Expect = 0.50, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L K PE Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 >4KV9-A nrPDB Length = 412 Score = 30.2 bits (67), Expect = 0.51, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 9/64 (14%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQF---PEVYVPTVFENYVADIEVD----GKQVELALW 58 ++ VG+ GK+ LL +F P + T + + + D +++L + Sbjct: 42 FNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT--DPKLKAVTYDLKEANVKLKLTVV 99 Query: 59 DTAG 62 +T G Sbjct: 100 ETCG 103 >3N5F-A nrPDB Length = 408 Score = 30.2 bits (67), Expect = 0.53, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 19/61 (31%), Gaps = 10/61 (16%) Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKK 119 TA + L + + + E+ + P+ ++LVG+ Sbjct: 31 TAEERRAKDLVASYMREAGLFV----------YEDAAGNLIGRKEGTNPDATVVLVGSHL 80 Query: 120 D 120 D Sbjct: 81 D 81 >4XGC-E nrPDB Length = 460 Score = 30.2 bits (67), Expect = 0.56, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALW 58 + + G GKT L F K+ V T ++ IE ++ L + Sbjct: 37 IYLFGHSGTGKTALTRAFLKECGKRQNVRT---AHLNAIECYTTKIMLEIL 84 >2NQL-A nrPDB Length = 388 Score = 30.2 bits (67), Expect = 0.56, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 55 LALWDTAGQEDYDRLRPL 72 +ALWD AGQE +R L Sbjct: 128 IALWDIAGQEAGKSIRDL 145 >1R6B-X nrPDB Length = 758 Score = 30.2 bits (67), Expect = 0.56, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 ++VG+ GKT L + PE Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPE 238 >5C78-A nrPDB Length = 564 Score = 30.2 bits (67), Expect = 0.58, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 7 KLVIVGDGACGKTCLL 22 K+ +G+ CGK+ L+ Sbjct: 377 KIAFIGESGCGKSTLV 392 >5OFO-C nrPDB Length = 871 Score = 30.2 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L + PE Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >4CIU-A nrPDB Length = 727 Score = 30.2 bits (67), Expect = 0.64, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L + PE Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >5JSZ-B nrPDB Length = 287 Score = 30.2 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 10/47 (21%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 + +VG GK+ L+ F + PT IE+ G + Sbjct: 36 IALVGHTGSGKSTLMQ-----HFNALLKPTSG-----KIEIAGYTIT 72 >5IDV-A nrPDB Length = 279 Score = 29.8 bits (66), Expect = 0.71, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN 41 + +VG GKT L+ + +F EV ++ + Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIYLD 99 >4HSE-A nrPDB Length = 397 Score = 29.8 bits (66), Expect = 0.72, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L K PE Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >1JBK-A nrPDB Length = 195 Score = 29.8 bits (66), Expect = 0.72, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L + PE Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >5GM6-Y nrPDB Length = 876 Score = 29.8 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 8 LVIVGDGACGKTCLLIVF-SKDQFPEVYVPTVFENYVADI 46 L+I+G+ GKT L + +D F + + + Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRV 281 >2IW3-A nrPDB Length = 986 Score = 29.8 bits (66), Expect = 0.74, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD 45 ++ ++ ++G GK+ L+ V + +PT E Y + Sbjct: 697 SLSSRIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734 >6ED3-A nrPDB Length = 848 Score = 29.8 bits (66), Expect = 0.84, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 5/37 (13%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPEVY-VPTVFE 40 V++G+ GKT L PE T+ Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 >2GZA-A nrPDB Length = 361 Score = 29.8 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 20/48 (41%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 55 +V+ G+ GKT L+ ++ + + T+ + + V L Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHL 225 >4MYH-A nrPDB Length = 598 Score = 29.8 bits (66), Expect = 0.86, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 16/51 (31%) Query: 7 KLVIVGDGACGKTC---LLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 K IVG GK+ L+ F Y P I ++G+ ++ Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG-----RILINGRDIK 404 >4HZI-A nrPDB Length = 294 Score = 29.4 bits (65), Expect = 0.92, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 25/57 (43%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 V++G GK+ L+ + + +F+ +I + + + + D++ QE Sbjct: 63 CVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGEIAIQDLRKRIGILDSSQQE 119 >5M04-A nrPDB Length = 360 Score = 29.4 bits (65), Expect = 0.94, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 17/75 (22%) Query: 100 TPEVKHFCPNV---PIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIG-AFG 155 E++ + ++ P LV NK DL + E+ + +A +G Sbjct: 283 ISELEKYSQDLATKPRWLVFNKIDLLDKVE-------------AEEKAKAIAEALGWEDK 329 Query: 156 YMECSAKTKDGVREV 170 Y SA + GV+++ Sbjct: 330 YYLISAASGLGVKDL 344 >1ZCA-A nrPDB Length = 359 Score = 29.4 bits (65), Expect = 0.97, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 10/60 (16%) Query: 7 KLVIVGDGACGKTCLL--IVFSKDQ-FPE----VYVPTVFENYVA--DIEVDGKQVELAL 57 K++++G G GK+ L + + F + + T+F+N + + VD + +L + Sbjct: 37 KILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARD-KLGI 95 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 13/87 (14%) Query: 109 NVPIILVGNKKDLRNDE----HTRRELAKMKQEPVKPEEGRDMANRIGA---------FG 155 NV IIL NK DL ++ ++ K +P + E+ + + Sbjct: 266 NVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRKRRNRSKPLF 325 Query: 156 YMECSAKTKDGVREVFEMATRAALQAR 182 + +A + +R VF LQ Sbjct: 326 HHFTTAIDTENIRFVFHAVKDTILQEN 352 >2QTH-A nrPDB Length = 364 Score = 29.4 bits (65), Expect = 0.98, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 36/191 (18%) Query: 10 IVGDGACGKTCLLIVFS--KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED-- 65 IVG GKT L + + T+ + ++ L DT G Sbjct: 184 IVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMS---PKRYAIPINNRKIMLVDTVGFIRGI 240 Query: 66 --------YDRLRPLSYPDTDVILMCFSIDSPDSL--ENIPEKWTPEVKHFCPNVPIILV 115 + L Y +D +++ ++L E + + + PI++ Sbjct: 241 PPQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVT 298 Query: 116 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGY--MECSAKTKDGVR----E 169 NK D N + ++ ++ + + + + SA + + + Sbjct: 299 LNKIDKINGDLYKKLDLV-----------EKLSKELYSPIFDVIPISALKRTNLELLRDK 347 Query: 170 VFEMATRAALQ 180 ++++AT+ +L+ Sbjct: 348 IYQLATQLSLE 358 >3IZQ-1 nrPDB Length = 611 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 38/166 (22%) Query: 9 VIVGDGACGKTCLLIVFSKD------------------------QFPEVYVPTVFENYVA 44 V++G GK+ L+ D +F + T E Sbjct: 171 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEER-ER 229 Query: 45 DIEV-------DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENI-- 95 + V + + D G D+ + D+ ++C S ++ E+ Sbjct: 230 GVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFD 288 Query: 96 PEKWTPEVKHFCPNVPI---ILVGNKKDLRNDEHTRRELAKMKQEP 138 + T E ++ I I+ NK D + R E K K P Sbjct: 289 LDGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLP 334 >5MKK-A nrPDB Length = 611 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 11/45 (24%) Query: 7 KLVIVGDGACGKT---CLLIVFSKDQFPEVYVPTVFENYVADIEV 48 K+ +VG GKT L+ F Y P ++ ++V Sbjct: 387 KVALVGATGAGKTSVVSLIARF--------YDPQRGCVFLDGVDV 423 >5FM7-A nrPDB Length = 464 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 26/154 (16%) Query: 8 LVIVGDGACGKTCLLIVFSK--DQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +++ G GKT L + S+ T E Y EV +V + E+ Sbjct: 69 VLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYST--EVKKTEVLM--------EN 118 Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 + R L +T + + E PE+ + + + +L+G K Sbjct: 119 FRRAIGLRVRETK------DVYEGEVTEMTPEEAENPLGGYGKTISTLLIGLKS------ 166 Query: 126 HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMEC 159 R K++ +P E + ++G Y+E Sbjct: 167 --ARGQKKLRLDPSIYEAIQKERVQVGDVIYIET 198 >3PXG-A nrPDB Length = 468 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L ++ PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >5AJ2-A nrPDB Length = 355 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 14/26 (53%) Query: 1 MAAIRKKLVIVGDGACGKTCLLIVFS 26 + A++ +I G+ GK+ LL + Sbjct: 158 LEALKSPCLIEGESGKGKSTLLQRIA 183 >3J3U-A nrPDB Length = 810 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L ++ PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >2YV5-A nrPDB Length = 302 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 6/40 (15%), Positives = 13/40 (32%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE 47 ++ G GK+ +L + ++ V E Sbjct: 168 CILAGPSGVGKSSILSRLTGEELRTQEVSEKTERGRHTTT 207 >5MRE-WW nrPDB Length = 401 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 6 KKLVIVGDGACGKTCLLIV 24 KK +I G+ GKT LL Sbjct: 95 KKFIITGEPGVGKTVLLSQ 113 >3PXI-A nrPDB Length = 758 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPE 32 V++G+ GKT L ++ PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >3P27-A nrPDB Length = 483 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 38/166 (22%) Query: 9 VIVGDGACGKTCLLIVFSKD------------------------QFPEVYVPTVFENYVA 44 V++G GK+ L+ D +F + T E Sbjct: 37 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEER-ER 95 Query: 45 DIEV-------DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENI-- 95 + V + + D G D+ + D+ ++C S ++ E+ Sbjct: 96 GVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFD 154 Query: 96 PEKWTPEVKHFCPNVPI---ILVGNKKDLRNDEHTRRELAKMKQEP 138 + T E ++ I I+ NK D + R E K K P Sbjct: 155 LDGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLP 200 >1NI3-A nrPDB Length = 392 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 13/84 (15%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 K IVG GK+ +K V NY +D ++ ++A+ D E Sbjct: 20 NLKTGIVGMPNVGKSTFFRAITKS------VLGNPANYPYA-TIDPEEAKVAVPD----E 68 Query: 65 DYDRLRPLSYPDTD--VILMCFSI 86 +D L P + L F I Sbjct: 69 RFDWLCEAYKPKSRVPAFLTVFDI 92 >6I3O-A nrPDB Length = 677 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 13/27 (48%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVY 34 L++VG+ GKT + + + Y Sbjct: 31 LIVVGETGSGKTTQVTQYLAEAGFTKY 57 >1EFM-A nrPDB Length = 379 Score = 29.0 bits (64), Expect = 1.1, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 10/134 (7%) Query: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDYDRL 69 +G GKT L + + +E D A D G DY + Sbjct: 17 IGHVDHGKTTLTAAITTVLAKTYGGAARGITINTSHVEYDTPTRHYAHVDCPGHADYVKN 76 Query: 70 RPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126 D ++ + P + E+I + P + + L NK D+ +DE Sbjct: 77 MITGAAQMDGAILVVAATDGPMPQTREHI----LLGRQVGVPYIIVFL--NKCDMVDDEE 130 Query: 127 TRRELAKMKQEPVK 140 + +E + Sbjct: 131 LLELVEMEVRELLS 144 >4CSU-9 nrPDB Length = 390 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 17/75 (22%) Query: 100 TPEVKHFCPNV---PIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIG-AFG 155 E++ + ++ P LV NK DL + E+ + +A +G Sbjct: 263 ISELEKYSQDLATKPRWLVFNKIDLLDKVE-------------AEEKAKAIAEALGWEDK 309 Query: 156 YMECSAKTKDGVREV 170 Y SA + GV+++ Sbjct: 310 YYLISAASGLGVKDL 324 >2RGK-A nrPDB Length = 421 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 16/56 (28%), Gaps = 10/56 (17%) Query: 55 LALWDTA--GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP 108 L WD A E+Y + + L+ + + +KW Sbjct: 155 LESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVT-------HDKKWLDRAIRVAS 202 >2QU8-A nrPDB Length = 228 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Query: 5 RKKLVIVGDGACGKTCLLIVFSK-DQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 +K +++ G GK+ + + S+ + + Y T YV D K + + DT G Sbjct: 29 KKTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHF--DHKLNKYQIIDTPGL 86 >1H65-A nrPDB Length = 270 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 21/58 (36%), Gaps = 4/58 (6%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV--ELALWDTAGQ 63 ++++G G GK+ + ++ + + V + L + DT G Sbjct: 42 ILVMGKGGVGKSSTVNSIIGERVVS--ISPFQSEGPRPVMVSRSRAGFTLNIIDTPGL 97 >6H7G-A nrPDB Length = 346 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 13/26 (50%), Gaps = 3/26 (11%) Query: 5 RKKLVIVG---DGACGKTCLLIVFSK 27 + K V++G D CGK+ + + Sbjct: 4 KDKTVVIGLAADSGCGKSTFMRRMTS 29 >2IYT-A nrPDB Length = 184 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 6/63 (9%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VG GK+ + +K + V + G+ + ++ T G++++ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIE-----QRTGRSI-ADIFATDGEQEF 57 Query: 67 DRL 69 R+ Sbjct: 58 RRI 60 >4HUQ-A nrPDB Length = 290 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 9/18 (50%) Query: 8 LVIVGDGACGKTCLLIVF 25 L I+G GK+ L+ Sbjct: 36 LAIIGHTGSGKSTLIQQL 53 >3VQT-A nrPDB Length = 548 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 5/81 (6%) Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 115 L DT G +D+ D L+ ID+ +E K + P++ Sbjct: 103 NLLDTPGHQDFSEDTYRVLTAVDSALVV--IDAAKGVEAQTRKLMDVCRMRA--TPVMTF 158 Query: 116 GNKKDLRNDEHTRRELAKMKQ 136 NK D R H +A ++Q Sbjct: 159 VNKMD-REALHPLDVMADIEQ 178 >3LLM-A nrPDB Length = 235 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEV 33 ++I G CGKT + F D F + Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >6G2G-A nrPDB Length = 310 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%) Query: 1 MAAIRKK---LVIVGDGACGKTCLLIVFS 26 M+ + K LV+ G G GK+ + + Sbjct: 1 MSLSQVKHIILVLSGKGGVGKSSVTTQLA 29 >5VHD-D nrPDB Length = 870 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 13/24 (54%) Query: 9 VIVGDGACGKTCLLIVFSKDQFPE 32 VI G+ CGKT + F D + E Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >4YPL-A nrPDB Length = 555 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 8 LVIVGDGACGKTCL 21 LV+VG GKT L Sbjct: 113 LVLVGPPGVGKTSL 126 >6HA8-V nrPDB Length = 548 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQ 29 K+ I+G GKT LL + + Sbjct: 325 KVAIIGPNGSGKTTLLNIILGQE 347 >1IHU-A nrPDB Length = 589 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Query: 8 LVIVGDGACGKTCL----LIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELAL 57 ++++G G GKT + + + F +V++ T + ++G L + Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGF-DVHLTTSDPAAHLSMTLNGSLNNLQV 382 >3GD7-A nrPDB Length = 390 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 16/62 (25%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++ ++G GK+ LL F + N +I++DG WD+ E + Sbjct: 49 RVGLLGRTGSGKSTLLSAFLRLL-----------NTEGEIQIDGVS-----WDSITLEQW 92 Query: 67 DR 68 + Sbjct: 93 RK 94 >5LZD-z nrPDB Length = 614 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 25/188 (13%) Query: 8 LVIVGDGACGKTCLLIVFSK---DQFPEVYV--PTVFENYVADIEVDGKQVELALWDTAG 62 + G GKT LL + D+ PE T+ Y + DG+ D G Sbjct: 3 IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFI--DVPG 60 Query: 63 QEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVG-NKKDL 121 E + D L+ + D + + N P++ V K D Sbjct: 61 HEKFLSNMLAGVGGIDHALLVVACDDG---VMAQTREHLAILQLTGN-PMLTVALTKADR 116 Query: 122 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 ++ ++K+ V E G A ++ +A G+ A R L Sbjct: 117 VDEARVDEVERQVKE--VLREYGFAEAK-----LFI-TAATEGRGMD-----ALREHLLQ 163 Query: 182 RRGKKKSG 189 ++ + Sbjct: 164 LPEREHAS 171 >3FVQ-A nrPDB Length = 359 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 11/19 (57%) Query: 8 LVIVGDGACGKTCLLIVFS 26 L I+G CGKT LL + Sbjct: 33 LFIIGASGCGKTTLLRCLA 51 >3B5X-A nrPDB Length = 582 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 12/20 (60%) Query: 8 LVIVGDGACGKTCLLIVFSK 27 + +VG GK+ + +F++ Sbjct: 372 VALVGRSGSGKSTIANLFTR 391 >1TAG-A nrPDB Length = 324 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 44/190 (23%) Query: 31 PEVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILM 82 YVPT + + ++ G K + ++D GQ + + I+ Sbjct: 134 TPGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIF 193 Query: 83 C-----FS--------IDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRR 129 + ++ ++ ++ + L NKKD+ +++ + Sbjct: 194 IAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFL--NKKDVFSEKIKKA 251 Query: 130 ELAKMKQE---PVKPEEGRDMANRIGAFGYME--------------CSAKTKDGVREVFE 172 L+ + P E+ + ++E A V+ VF+ Sbjct: 252 HLSICFPDYNGPNTYEDAGNYIK----VQFLELNMRRDVKEIYSHMTCATDTQNVKFVFD 307 Query: 173 MATRAALQAR 182 T ++ Sbjct: 308 AVTDIIIKEN 317 >3DEF-A nrPDB Length = 262 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 19/56 (33%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++++G G GK+ + +Q V + + + DT G Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGL 94 >3VX4-A nrPDB Length = 273 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 10/48 (20%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 K+ +VG GKT L + Y P + ++G ++ Sbjct: 63 KVSLVGASGSGKTTLAKLIVN-----FYEPNKGI-----VRINGNDLK 100 >5D4W-A nrPDB Length = 926 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 5/14 (35%), Positives = 10/14 (71%) Query: 9 VIVGDGACGKTCLL 22 V++G+ GKT ++ Sbjct: 220 VLIGEPGVGKTTIV 233 >6D00-1 nrPDB Length = 883 Score = 28.2 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 10/29 (34%), Gaps = 4/29 (13%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPEV 33 +VG+ GKT L K P Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >4RY2-A nrPDB Length = 730 Score = 28.2 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 10/47 (21%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 + IVG+ GKT L + Y P + I ++G ++ Sbjct: 518 VAIVGESGSGKTTLAKLLMN-----FYSPEKGD-----ILINGHSIK 554 >4YPN-A nrPDB Length = 293 Score = 28.2 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 8 LVIVGDGACGKTCL 21 LV+VG GKT L Sbjct: 146 LVLVGPPGVGKTSL 159 >6EM8-A nrPDB Length = 818 Score = 28.2 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPEV 33 V++G+ GKT L ++ PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPET 233 >6EMW-E nrPDB Length = 181 Score = 28.2 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPEV 33 V++G+ GKT L ++ PE Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPET 72 >3PV0-A nrPDB Length = 381 Score = 28.2 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 8 LVIVGDGACGKTCLLIVFS 26 +V VG CGK+ LL + + Sbjct: 32 VVFVGPSGCGKSTLLRMIA 50 >2ZBL-A nrPDB Length = 421 Score = 28.2 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 16/56 (28%), Gaps = 10/56 (17%) Query: 55 LALWDTAGQ--EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCP 108 L WD A EDY + + L+ + + +KW Sbjct: 155 LESWDEAFSQTEDYRG-GNANMHAVEAFLIVYDVT-------HDKKWLDRALRIAS 202 >6OIK-A nrPDB Length = 354 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 18/95 (18%) Query: 2 AAIRKKLVIVGDGACGKTCLLIVFS-------KDQFPEVYVPTVFENYVADIEVDGKQVE 54 AA KL+++G G GK+ ++ + + Y P Y I+ V Sbjct: 30 AAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKP---VVYSNTIQSLAAIVR 86 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSP 89 DT G E D+ D ++C + S Sbjct: 87 AM--DTLGIEYGDKE-----RKADAKMVC-DVVSR 113 >6QUZ-B nrPDB Length = 599 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 3/22 (13%) Query: 7 KLVIVGDGACGKTC---LLIVF 25 K+ +VG GKT LL+ F Sbjct: 383 KVALVGPTGSGKTTIVNLLMRF 404 >4J0Q-A nrPDB Length = 433 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 47/150 (31%), Gaps = 26/150 (17%) Query: 11 VGDGACGKTCL---LIVFSKDQF-------------PEVYVPTVFENYVADIEVDGKQVE 54 +G GKT L L + F PE + N A +E + Sbjct: 54 IGHVDHGKTTLTAALTRVCSEVFGSAIVEFDKIDSAPEEKARGITIN-TAHVEYNSTIRH 112 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVP 111 A D G DY + D ++ S P + E+I + P + Sbjct: 113 YAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI----LLSRQVGVPYIV 168 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQEPVKP 141 + L NK DL +D + ++ + Sbjct: 169 VFL--NKADLVDDAELLELVEMEVRDLLST 196 >3A1W-A nrPDB Length = 168 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 33/182 (18%) Query: 7 KLVIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+ + G GKT L + Q+ + E G + L D G Sbjct: 7 KVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI--DLPGTYS 64 Query: 66 --YDRLRPLSYP------DTDVILMCFS-IDSPDSLENIPEKWTPEVKHFCPNVPIILVG 116 Y + D D++++ ++ SL + E E K +IL Sbjct: 65 LGYSSIDEKIARDYLLKGDADLVILVADSVNPEQSLYLLLEILEMEKK-------VILAM 117 Query: 117 NKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 D + + ++ + + S+ T +G+ E+ E Sbjct: 118 TAIDEAKKTGMKIDRYEL--------------QKHLGIPVVFTSSVTGEGLEELKEKIVE 163 Query: 177 AA 178 A Sbjct: 164 YA 165 >6IC4-I nrPDB Length = 233 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 50/177 (28%), Gaps = 31/177 (17%) Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68 I+G GKT LL Q ++ +DGK D A Sbjct: 31 AIMGPSGTGKTTLL-RLIGGQLVPDQ---------GEVLLDGK-------DIAQMSRQRA 73 Query: 69 LRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD---LR-ND 124 + + + EN+ N+ LV K + LR + Sbjct: 74 RMGMLFQSGALF------TDMSVYENVAFPI--RAHTLSENLIAELVALKLESVGLRGTE 125 Query: 125 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQA 181 + EL+ V R +A Y E A V+ V R+ +A Sbjct: 126 QLMPTELSGGMNRRVAL--ARAIALDPDLIMYDEPFAGQDPIVKGVLTRLIRSLREA 180 >4A9A-A nrPDB Length = 376 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 9/56 (16%) Query: 11 VGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG----KQVELALWDTAG 62 VG + GK+ LL + + + + V G K ++ + D G Sbjct: 78 VGFPSVGKSTLLSKLTGTE-----SEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPG 128 >2PJZ-A nrPDB Length = 263 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 17/61 (27%) Query: 7 KLVIVGDGACGKTCLLIV------FSKDQFPE-----------VYVPTVFENYVADIEVD 49 K++I+G GKT LL +S + F Y + E Y + V+ Sbjct: 32 KVIILGPNGSGKTTLLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGVTVN 91 Query: 50 G 50 Sbjct: 92 D 92 >1WXQ-A nrPDB Length = 397 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 13/75 (17%) Query: 96 PEKW-TPEVKHFCPNV-----PIILVGNKKDLRNDEHTRRELAKMKQE---PVKPEEGRD 146 P KW ++ F + P+++ NK D +DE +R + + ++ + + Sbjct: 195 PTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEKRGYIVIPTSAAAE 254 Query: 147 M----ANRIGAFGYM 157 + A + G Y+ Sbjct: 255 LTLRKAAKAGFIEYI 269 >5W7Q-A nrPDB Length = 373 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 26/150 (17%) Query: 11 VGDGACGKTCLLIVFSK----------------DQFPEVYVPTVFENYVADIEVDGKQVE 54 +G GKT L + D PE + N A +E + + Sbjct: 11 IGHVDHGKTTLTAAITTVLAKKGGAEAKAYDQIDNAPEEKARGITIN-TAHVEYETENRH 69 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVP 111 A D G DY + D ++ S P + E+I + P + Sbjct: 70 YAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI----LLARQVGVPYIV 125 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQEPVKP 141 + L NK D+ +DE + +E + Sbjct: 126 VFL--NKCDMVDDEELLELVEMEVRELLSE 153 >2P4Q-A nrPDB Length = 497 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 15/26 (57%) Query: 38 VFENYVADIEVDGKQVELALWDTAGQ 63 + + + +VDGK + + DTAGQ Sbjct: 241 ITRDILKFDDVDGKPLVEKIMDTAGQ 266 >4N1A-A nrPDB Length = 589 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Query: 9 VIVGDGACGKTCLLIVFSKD---QFPEVYVPTVFENYVADI 46 ++ GD CGK+ LL + + ++ +F +Y + Sbjct: 387 LVFGDTECGKSNLLRLITAGIIERYTPQQARLIFIDYSRSL 427 >6G12-A nrPDB Length = 301 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 3/57 (5%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 + +IVG GK+ L+ +K + I+V L L DT G Sbjct: 128 IRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNA---LQLLDTPG 181 >1R5O-A nrPDB Length = 467 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 59/197 (29%), Gaps = 36/197 (18%) Query: 8 LVIVGDGACGKTCL------------------LIVFSKDQFPEVY------VPTVFE-NY 42 +V +G GK+ L + +K+ E + T E Sbjct: 46 IVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREK 105 Query: 43 VADIEV-----DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPE 97 +EV + + +L D G + Y D+ ++ S E E Sbjct: 106 GKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVIS-ARRGEFEAGFE 164 Query: 98 KWTPEVKHF----CPNVP-IILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIG 152 + +H + +++V NK D + + + + + N Sbjct: 165 RGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKT 224 Query: 153 AFGYMECSAKTKDGVRE 169 YM SA T V++ Sbjct: 225 DVKYMPVSAYTGQNVKD 241 >6C2V-A nrPDB Length = 115 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 8 LVIVGDGACGKTCL--LIVFSKDQFPEVYVPTVF 39 +VIVG GKT L L +K++ P+ + TV Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTVT 38 Score = 26.3 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 1/34 (2%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN 41 +VIVG GK+ L K T+ Sbjct: 58 VVIVGPSGSGKSTLA-KIVKKIIARAGAKTIEVT 90 >5W76-A nrPDB Length = 385 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 50/150 (33%), Gaps = 26/150 (17%) Query: 11 VGDGACGKTCLLIVFSK----------------DQFPEVYVPTVFENYVADIEVDGKQVE 54 +G GKT L +K D+ PE + + A +E + + Sbjct: 10 IGHVDHGKTTLTAAITKVLAEKGQAEFKAYDQIDKAPEEKERGITIS-TAHVEYETENRH 68 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVP 111 A D G DY + D ++ S P + E+I + P + Sbjct: 69 YAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI----LLARQVGVPYIV 124 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQEPVKP 141 + L NK D+ +DE + +E + Sbjct: 125 VFL--NKVDMVDDEELLELVEMEVRELLSS 152 >4MRS-A nrPDB Length = 614 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 16/50 (32%) Query: 7 KLVIVGDGACGKTC---LLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 53 ++ IVG GK+ LL F Y P + I +DG+ + Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF--------YDP-----WEGRILIDGQDI 425 >6FA9-A nrPDB Length = 655 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 11/20 (55%) Query: 8 LVIVGDGACGKTCLLIVFSK 27 L++VG+ GKT + + Sbjct: 50 LILVGETGSGKTTQIPQYLH 69 >5NIK-J nrPDB Length = 654 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 8 LVIVGDGACGKTCLLI 23 + IVG GK+ L+ Sbjct: 37 VAIVGASGSGKSTLMN 52 >4O0M-A nrPDB Length = 524 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 13/37 (35%) Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD 45 ++ G GKT + F + P +F + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEES 80 >5LJA-A nrPDB Length = 231 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 8 LVIVGDGACGKTCLLI 23 + IVG GK+ L+ Sbjct: 37 VAIVGASGSGKSTLMN 52 >3MMP-A nrPDB Length = 678 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 47/149 (31%), Gaps = 26/149 (17%) Query: 11 VGDGACGKTCLLIVFSK----------------DQFPEVYVPTVFENYVADIEVDGKQVE 54 +G GKT L + D PE + N + +E D Sbjct: 302 IGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITIN-TSHVEYDTPTRH 360 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVP 111 A D G DY + D ++ + P + E+I + P + Sbjct: 361 YAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI----LLGRQVGVPYII 416 Query: 112 IILVGNKKDLRNDEHTRRELAKMKQEPVK 140 + L NK D+ +DE + +E + Sbjct: 417 VFL--NKCDMVDDEELLELVEMEVRELLS 443 >2P65-A nrPDB Length = 187 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 9 VIVGDGACGKTC----LLIVFSKDQFPEV 33 +++GD GKT L I + P+ Sbjct: 47 ILLGDPGVGKTAIVEGLAIKIVQGDVPDS 75 >4Q7L-A nrPDB Length = 256 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 3/22 (13%) Query: 7 KLVIVGDGACGKTC---LLIVF 25 K+ +VG GKT LL+ F Sbjct: 33 KVALVGPTGSGKTTIVNLLMRF 54 >1YR7-A nrPDB Length = 262 Score = 27.5 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 58/184 (31%), Gaps = 71/184 (38%) Query: 8 LVIVGDGACGKTCLL---IVFSKDQF--------------------------------PE 32 +V VG GKT L + +D + E Sbjct: 17 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMRE 76 Query: 33 VYVPT--VFENYVADI----EVDGKQVELA------LWDTAGQ-EDY-------DRLRPL 72 Y P + E+Y + E K + L L DT GQ E + + L Sbjct: 77 GYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENL 136 Query: 73 SYPDTDVILMCFSIDSPDSLENIPE-------KWTPEVKHFCPNVPIILVGNKKDLRNDE 125 YP L+ + I P+ L+ + +++ +P + NK DL ++E Sbjct: 137 PYP-----LVVY-ISDPEILKKPNDYCFVRFFALLIDLRLGATTIPAL---NKVDLLSEE 187 Query: 126 HTRR 129 R Sbjct: 188 EKER 191 >6FT6-s nrPDB Length = 520 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 3/72 (4%) Query: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDE 125 YD++ +DVIL P+S + E +IL+ NK DL Sbjct: 165 YDKIFKSVIDASDVILYVLDARDPES---TRSRKVEEAVLQSQGKRLILILNKVDLIPPH 221 Query: 126 HTRRELAKMKQE 137 + L +K Sbjct: 222 VLEQWLNYLKSS 233 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 8/58 (13%) Query: 10 IVGDGACGKTC-----LLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 ++G GK+ L + + V + +I++D +L + D+ G Sbjct: 285 VIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTTSLREIKIDN---KLKILDSPG 339 >5LKM-A nrPDB Length = 452 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 8 LVIVGDGACGKTCLLIVFSK 27 ++I GD GK+ LL+ S Sbjct: 91 VLIGGDPGIGKSTLLLQVST 110 >3A1U-A nrPDB Length = 258 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 54/182 (29%), Gaps = 33/182 (18%) Query: 7 KLVIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+ + G GKT L + Q+ + E G + L D G Sbjct: 7 KVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI--DLPGTYS 64 Query: 66 --YDRLRPLSYP------DTDVILMCFS-IDSPDSLENIPEKWTPEVKHFCPNVPIILVG 116 Y + D D++++ ++ SL + E E K +IL Sbjct: 65 LGYSSIDEKIARDYLLKGDADLVILVADSVNPEQSLYLLLEILEMEKK-------VILAM 117 Query: 117 NKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATR 176 D + + ++ + + S+ T +G+ E+ E Sbjct: 118 TAIDEAKKTGMKIDRYEL--------------QKHLGIPVVFTSSVTGEGLEELKEKIVE 163 Query: 177 AA 178 A Sbjct: 164 YA 165 >4V5G-AZ nrPDB Length = 406 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 29/137 (21%) Query: 11 VGDGACGKTCLLIVFSK-----------------DQFPEVYVPTVFENYVADIEVDGKQV 53 +G GKT L + D+ PE + N A +E + + Sbjct: 18 IGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITIN-TAHVEYETAKR 76 Query: 54 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNV 110 + D G DY + D ++ S P + E+I + V Sbjct: 77 HYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHI-------LLARQVGV 129 Query: 111 PIILV-GNKKDLRNDEH 126 P I+V NK D+ +D Sbjct: 130 PYIVVFMNKVDMVDDPE 146 >2CBZ-A nrPDB Length = 237 Score = 27.5 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 8 LVIVGDGACGKTCLLIVFS 26 + +VG CGK+ LL Sbjct: 34 VAVVGQVGCGKSSLLSALL 52 >2IT1-A nrPDB Length = 362 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 10/47 (21%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 + ++G GK+ LL + +Y PT I D K V Sbjct: 32 MALLGPSGSGKSTLLYTIAG-----IYKPTSG-----KIYFDEKDVT 68 >5ZLU-EE nrPDB Length = 497 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 14/39 (35%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD 45 K+ I G GKT LL + S+ P Y Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQ 362 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 11/16 (68%) Query: 7 KLVIVGDGACGKTCLL 22 ++ +VGD GK+ LL Sbjct: 32 RIGLVGDNGAGKSSLL 47 >5JWO-A nrPDB Length = 247 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 13/37 (35%) Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD 45 ++ G GKT + F + P +F + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEES 72 >5DO7-A nrPDB Length = 666 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 9/15 (60%) Query: 8 LVIVGDGACGKTCLL 22 + I+G GKT LL Sbjct: 82 MCILGSSGSGKTTLL 96 >5ZME-A nrPDB Length = 687 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%), Gaps = 1/18 (5%) Query: 5 RKKLVIV-GDGACGKTCL 21 ++K +++ G G GKT L Sbjct: 11 QRKYIMISGKGGVGKTSL 28 >4C3Z-A nrPDB Length = 266 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 8 LVIVGDGACGKTCLLIVFS 26 + +VG CGK+ LL Sbjct: 59 VAVVGQVGCGKSSLLSALL 77 >3LXX-A nrPDB Length = 239 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 5/61 (8%) Query: 5 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG---KQVELALWDTA 61 + ++V+VG GK+ + + T ++ E K+ EL + DT Sbjct: 29 QLRIVLVGKTGAGKSATGNSILGRKVF--HSGTAAKSITKKCEKRSSSWKETELVVVDTP 86 Query: 62 G 62 G Sbjct: 87 G 87 >5GKO-A nrPDB Length = 671 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 8 LVIVGDGACGKTCLLI 23 + IVG GK+ L+ Sbjct: 46 VAIVGQSGSGKSTLMN 61 >6QUZ-A nrPDB Length = 587 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 55 + ++G+ GK+ L+ + + PE V + E+D + V+L Sbjct: 372 VAVLGETGSGKSTLMNLIPRLIDPERGR--VEVD-----ELDVRTVKL 412 >5XU1-A nrPDB Length = 245 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 5/43 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG 50 + I+G GK+ L+ PT E Y+ EV G Sbjct: 49 VAIMGPSGSGKSTLMNTIGMLD-----TPTSGEYYLEGQEVAG 86 >3R7W-B nrPDB Length = 331 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 66/182 (36%), Gaps = 20/182 (10%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG--KQVELALWDTAGQ-- 63 ++++G CGK+ + V + P T++ ++ ++ ++LA+ + GQ Sbjct: 2 VLLMGVRRCGKSSICKVVFHNMQPLD---TLYLESTSNPSLEHFSTLIDLAVMELPGQLN 58 Query: 64 ---EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHF---CPNVPIILVGN 117 YD R + + IDS D N +++ P++ I ++ + Sbjct: 59 YFEPSYDSERLFKSVGA----LVYVIDSQDEYINAITNLAMIIEYAYKVNPSINIEVLIH 114 Query: 118 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 177 K D +++ + Q EE ++ + S + E F + Sbjct: 115 KVDGLSEDFKVDAQRDIMQR--TGEELLELGLDGVQVSFYLTSIFD-HSIYEAFSRIVQK 171 Query: 178 AL 179 + Sbjct: 172 LI 173 >2OCP-A nrPDB Length = 241 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPT 37 ++L I G+ A GK+ + +PE +V T Sbjct: 3 RRLSIEGNIAVGKSTFV-KLLTKTYPEWHVAT 33 >4ZV4-A nrPDB Length = 405 Score = 27.1 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 44/141 (31%), Gaps = 26/141 (18%) Query: 11 VGDGACGKTCLLIVFSK----------------DQFPEVYVPTVFENYVADIEVDGKQVE 54 +G GKT L +K D PE + N + +E D Sbjct: 18 IGHVDHGKTTLTAALTKVCSDTWGGSARAFDQIDNAPEEKARGITIN-TSHVEYDSAVRH 76 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS---PDSLENIPEKWTPEVKHFCPNVP 111 A D G DY + D ++ S P + E+I + P + Sbjct: 77 YAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI----LLSRQVGVPYIV 132 Query: 112 IILVGNKKDLRNDEHTRRELA 132 + L NK D+ +D + Sbjct: 133 VFL--NKADMVDDAELLELVE 151 >5B57-C nrPDB Length = 273 Score = 27.1 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Query: 9 VIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 53 ++G GK+ LL F+ + P D+ ++G+ + Sbjct: 31 ALLGRNGAGKSTLLKTFA-GELTGSVAPH-GVRVTGDVTLNGEPL 73 >4FID-A nrPDB Length = 340 Score = 27.1 bits (59), Expect = 4.6, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 3/33 (9%) Query: 8 LVIVGDGACGKTCLLIVFS---KDQFPEVYVPT 37 ++++G G GK+ + FPE T Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >2QAG-B nrPDB Length = 427 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 12/25 (48%) Query: 6 KKLVIVGDGACGKTCLLIVFSKDQF 30 ++ VG+ GK+ L+ +F Sbjct: 43 FNILCVGETGLGKSTLMDTLFNTKF 67 >2WJG-A nrPDB Length = 188 Score = 27.1 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 32/191 (16%) Query: 5 RKKLVIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ ++G+ GK+ + + ++ + + E + E +G+ + + D G Sbjct: 7 SYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPG- 63 Query: 64 EDYDRLRPLSYPD---TDVIL-----MCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 115 L S + D I+ + +I +LE ++ ++L Sbjct: 64 --VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALE---RNLYLTLQLMEMGANLLLA 118 Query: 116 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 NK DL ++ K+ +I + SA K G+ E+ + A Sbjct: 119 LNKMDLAKSLGIEIDVDKL--------------EKILGVKVVPLSAAKKMGIEEL-KKAI 163 Query: 176 RAALQARRGKK 186 A++ ++ + Sbjct: 164 SIAVKDKKTAE 174 >5DGX-A nrPDB Length = 256 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FENYVADIEVDGKQVELAL 57 + VG GKT L + S +F + + + ++ ++ + L++ Sbjct: 47 VAFVGKSGSGKTTLTSIIS--RFYTQHEGEILLDGVD-TRELTLENLRSHLSI 96 >4KXX-A nrPDB Length = 637 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 21/70 (30%), Gaps = 4/70 (5%) Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTK---DGVREVFE-MAT 175 DL + V E+ ++A ++ S E F+ Sbjct: 433 DLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQA 492 Query: 176 RAALQARRGK 185 + L+++ + Sbjct: 493 KVVLKSKDDQ 502 >4Q7K-A nrPDB Length = 250 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 7/48 (14%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 55 + ++G+ GK+ L+ + + PE V + E+D + V+L Sbjct: 34 VAVLGETGSGKSTLMNLIPRLIDPERGR--VEVD-----ELDVRTVKL 74 >5EE0-A nrPDB Length = 395 Score = 27.1 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 12/71 (16%) Query: 3 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 + K+ IVG GK+ + +K P P +D + + + D Sbjct: 23 SSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFP--------FCTIDPNEARVYVPD--- 71 Query: 63 QEDYDRLRPLS 73 E +D L L Sbjct: 72 -ERFDWLCQLY 81 >6BZR-B nrPDB Length = 251 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 9/16 (56%) Query: 7 KLVIVGDGACGKTCLL 22 K+ IVG GK+ L Sbjct: 42 KVGIVGRTGAGKSSLA 57 >4RI0-A nrPDB Length = 332 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 8/70 (11%) Query: 105 HFCPNVPIILVGNKKDLRNDEHTRRELAKMK-QEPVKP-------EEGRDMANRIGAFGY 156 H +P++L+G+ DLR E + Q V EGR++ R Y Sbjct: 105 HPKKKLPVLLLGHSADLRPGEFVVAIGSPFALQNTVTTGIVSTAQREGRELGLRDSDMDY 164 Query: 157 MECSAKTKDG 166 ++ A G Sbjct: 165 IQTDAIINYG 174 >2OHJ-A nrPDB Length = 404 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%) Query: 120 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179 DLRN + V +EG + + + E A+ +D +++V + Sbjct: 21 DLRNYHGYTLQGTTYNAYLVCGDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYII 80 Query: 180 QARRGKKKSGCLI 192 Q K SG L+ Sbjct: 81 QNHVEKDHSGVLV 93 >3LX8-A nrPDB Length = 272 Score = 27.1 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 44/183 (24%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE----LALWDTAGQ 63 + ++G+ GKT L + + + V +E V+ L + D G Sbjct: 6 IALIGNPNSGKTSLFNLITG------HNQRVGNWPGVTVERKSGLVKKNKDLEIQDLPG- 58 Query: 64 EDYDRLRPLS--------Y---PDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPI 112 + P S Y D IL N+ + +P+ Sbjct: 59 --IYSMSPYSPEEKVARDYLLSQRADSILNVVDAT------NLERNLYLTTQLIETGIPV 110 Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 + N D+ + + + + K+ + SA + GV +V + Sbjct: 111 TIALNMIDVLDGQGKKINVDKLS--------------YHLGVPVVATSALKQTGVDQVVK 156 Query: 173 MAT 175 A Sbjct: 157 KAA 159 >4R98-A nrPDB Length = 271 Score = 27.1 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 38/141 (26%), Gaps = 21/141 (14%) Query: 10 IVGDGACGKTCLLIVFSKD-QFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68 ++G+ GKT L + Q + E QV L D G Sbjct: 8 LIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTL--VDLPGTYSLTT 65 Query: 69 LRP----------LSYPDTDVILM--CFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVG 116 + D L+ N+ ++ +P I+ Sbjct: 66 ISSQTSLDEQIACHYILSGDADLLINVVDAS------NLERNLYLTLQLLELGIPCIVAL 119 Query: 117 NKKDLRNDEHTRRELAKMKQE 137 N D+ ++ R E+ + Sbjct: 120 NMLDIAEKQNIRIEIDALSAR 140 >1IRQ-A nrPDB Length = 71 Score = 27.1 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 ++VGN L + R + ++ + ++ + + +E AK V+EV + Sbjct: 1 MIVGN---LGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIET-AKNGGNVKEVMD 56 Query: 173 MATRAALQA 181 A ++ Sbjct: 57 QALEEYIRK 65 >5D0U-A nrPDB Length = 714 Score = 26.7 bits (58), Expect = 5.7, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 8 LVIVGDGACGKTCLLIVFS 26 LV VG+ GKT + + Sbjct: 57 LVFVGETGSGKTTQIPQYV 75 >3D0O-A nrPDB Length = 317 Score = 26.7 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 10/53 (18%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 59 K+V++G+GA G + + + I++D ++V + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQSIVDE---------LVIIDLDTEKVRGDVMD 50 >4UUM-A nrPDB Length = 341 Score = 26.7 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 17/96 (17%) Query: 85 SIDSPDS--LENIPE---KWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPV 139 + S +S +N E KW P+V ++++GN ++T E+A + + + Sbjct: 99 DLISSNSVIFKNTGEYLSKWAK------PSVKVLVIGN------PDNTNCEIAMLHAKNL 146 Query: 140 KPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 175 KPE ++ Y E ++K V++V ++ Sbjct: 147 KPENFSSLSMLDQNRAYYEVASKLGVDVKDVHDIIV 182 >4XIG-S nrPDB Length = 363 Score = 26.7 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 10/47 (21%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 +V+VG CGK+ L V + E I +DG+ + Sbjct: 33 VVLVGPSGCGKSTTL----------RMVAGLEEISGGTIRIDGRVIN 69 >4HI0-E nrPDB Length = 199 Score = 26.7 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 11/67 (16%) Query: 113 ILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172 +LV NK DL ++ + RD G ++ + + K+G+ +V Sbjct: 141 LLVINKIDLAPYVGADLKVME-----------RDSKKMRGEKPFIFTNIRAKEGLDDVIA 189 Query: 173 MATRAAL 179 R AL Sbjct: 190 WIKRNAL 196 >2WJI-A nrPDB Length = 165 Score = 26.7 bits (58), Expect = 6.0, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 31/175 (17%) Query: 5 RKKLVIVGDGACGKTCLLIVFS-KDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ ++G+ GK+ + + ++ + + E + E +G+ + + D G Sbjct: 3 SYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPG- 59 Query: 64 EDYDRLRPLSYPD---TDVIL-----MCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 115 L S + D I+ + +I +LE ++ ++L Sbjct: 60 --VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALE---RNLYLTLQLMEMGANLLLA 114 Query: 116 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 170 NK DL ++ K+ +I + SA K G+ E+ Sbjct: 115 LNKMDLAKSLGIEIDVDKL--------------EKILGVKVVPLSAAKKMGIEEL 155 >2GA8-A nrPDB Length = 359 Score = 26.7 bits (58), Expect = 6.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK 51 +++VG GK+ + + E Y T + IEV+ + Sbjct: 27 VILVGSPGSGKSTIAEELCQ-IINEKY-HTFLSEHPNVIEVNDR 68 >2NQ2-C nrPDB Length = 253 Score = 26.7 bits (58), Expect = 6.2, Method: Composition-based stats. Identities = 25/201 (12%), Positives = 58/201 (28%), Gaps = 44/201 (21%) Query: 8 LVIVGDGACGKTCLL------IVFSKDQ--------FPEVYVPTVFENYVADIEVDGKQV 53 L ++G CGK+ LL + + F + + F V DI + G+ Sbjct: 34 LAVLGQNGCGKSTLLDLLLGIHRPIQGKIEVYQSIGFVPQFFSSPFAYSVLDIVLMGRST 93 Query: 54 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSID--SPDSLENIP---EKWTPEVKHFCP 108 + + + + Y L ++ + ++ + + Sbjct: 94 HIN--------TFAKPKSHDYQVAMQALDYLNLTHLAKREFTSLSGGQRQLILIARAIAS 145 Query: 109 NVPIIL---------VGNK-------KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIG 152 +IL + N+ DL ++ + V + + Sbjct: 146 ECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQ 205 Query: 153 AFGYMEC-SAKTKDGVREVFE 172 F + E + T + + +F Sbjct: 206 NFKFGETRNILTSENLTALFH 226 >6DJQ-A nrPDB Length = 391 Score = 26.7 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 8 LVIVGDGACGKTCLLIVFSKDQF 30 +V+VG + GK+ +L F Sbjct: 48 IVVVGSQSSGKSSVLENIVGRDF 70 >4YDS-A nrPDB Length = 228 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 4/53 (7%) Query: 8 LVIVGDGACGKTCLLIVFSKD---QFPEVYVPTVFENYVADIEVDGKQVELAL 57 ++I GD GK+ L F + YV T + D + K++++ L Sbjct: 23 IMIEGDHGTGKSVLSAQFVLGFLLSDKKGYVITTEQT-TKDYLIKMKEIKIDL 74 >2D62-A nrPDB Length = 375 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 20/38 (52%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD 45 LV++G CGKT L + + + P + +N VAD Sbjct: 35 LVLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDNLVAD 72 >1V5Y-A nrPDB Length = 217 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 6/70 (8%) Query: 89 PDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMA 148 DS N+ + P +K C +V IL NK D++ + + + E+ Sbjct: 62 HDSFANMHQFNQPHIK-ACSHV--ILFANKLSYTRDDYDVVLSKAVADKRITEEQKEA-- 116 Query: 149 NRIGAFGYME 158 +F ++E Sbjct: 117 -AFASFKFVE 125 >1T9H-A nrPDB Length = 307 Score = 26.7 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 8/18 (44%) Query: 9 VIVGDGACGKTCLLIVFS 26 V G GK+ LL S Sbjct: 177 VFAGQSGVGKSSLLNAIS 194 >5I8Q-A nrPDB Length = 767 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 8 LVIVGDGACGKTCLLIVFS 26 +V VG+ GKT + F Sbjct: 112 MVFVGETGSGKTTQIPQFV 130 >2ZBK-A nrPDB Length = 389 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 13/26 (50%) Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILM 82 ++D ++Y +R L Y +L+ Sbjct: 89 IYDALVSDEYPTIRDLYYRGKHSLLL 114 >5LL6-h nrPDB Length = 608 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEV 33 LV++G+ GKT L+ + + P+ Sbjct: 381 LVMMGENGTGKTTLIKLLAGALKPDE 406 >5L22-B nrPDB Length = 572 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 5/15 (33%), Positives = 9/15 (60%) Query: 8 LVIVGDGACGKTCLL 22 + I+G GK+ L+ Sbjct: 362 VAIIGPSGSGKSSLV 376 >6FOC-D nrPDB Length = 475 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 6/17 (35%), Positives = 9/17 (52%) Query: 7 KLVIVGDGACGKTCLLI 23 K+ + G GKT L+ Sbjct: 155 KIALFGGAGVGKTVLIQ 171 >2OUK-A nrPDB Length = 263 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 9/18 (50%) Query: 8 LVIVGDGACGKTCLLIVF 25 +V++G GK+ L Sbjct: 53 VVVIGPSGSGKSTFLRCL 70 >5TV4-A nrPDB Length = 605 Score = 26.7 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 10/21 (47%), Gaps = 3/21 (14%) Query: 8 LVIVGDGACGKT---CLLIVF 25 + +VG GK+ L+ F Sbjct: 395 VALVGRSGSGKSTIASLITRF 415 >3EPJ-A nrPDB Length = 409 Score = 26.3 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 11/21 (52%) Query: 8 LVIVGDGACGKTCLLIVFSKD 28 +VI G GK+ L I ++ Sbjct: 5 IVIAGTTGVGKSQLSIQLAQK 25 >4XD7-D nrPDB Length = 483 Score = 26.3 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 10/22 (45%) Query: 7 KLVIVGDGACGKTCLLIVFSKD 28 K+ + G GKT L+ + Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184 >3WMF-A nrPDB Length = 621 Score = 26.3 bits (57), Expect = 8.0, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 3/21 (14%) Query: 8 LVIVGDGACGKTC---LLIVF 25 + IVG GK+ LL+ F Sbjct: 382 VAIVGGSGAGKSTIIQLLMRF 402 >5LJ6-A nrPDB Length = 664 Score = 26.3 bits (57), Expect = 8.2, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 10/18 (55%) Query: 8 LVIVGDGACGKTCLLIVF 25 + I+G GK+ L+ + Sbjct: 56 VAIMGQSGSGKSTLMNII 73 >6MAT-A nrPDB Length = 813 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 3/34 (8%) Query: 8 LVIVGDGACGKTCLLIVFSKD---QFPEVYVPTV 38 +++ G CGKT L + F V P+V Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSIGVAFIPVSAPSV 272 >4A2I-V nrPDB Length = 277 Score = 26.3 bits (57), Expect = 8.6, Method: Composition-based stats. Identities = 5/15 (33%), Positives = 6/15 (40%) Query: 12 GDGACGKTCLLIVFS 26 G GK+ LL Sbjct: 167 GQSGVGKSSLLNALL 181 >2YK0-A nrPDB Length = 790 Score = 26.3 bits (57), Expect = 8.6, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 13/50 (26%) Query: 83 CFSIDSPDSLENIPEKWTPEVKHF-------------CPNVPIILVGNKK 119 ID + + + E+W + N I L NK Sbjct: 566 VIDIDKHITFKVLLERWLKDFLEGYKKSKRKINPCTKDKNSCIKLCINKC 615 >5EUM-A nrPDB Length = 258 Score = 26.3 bits (57), Expect = 8.6, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 10/21 (47%), Gaps = 3/21 (14%) Query: 8 LVIVGDGACGKTC---LLIVF 25 + +VG GK+ L+ F Sbjct: 48 VALVGRSGSGKSTIANLVTRF 68 >2JAQ-A nrPDB Length = 205 Score = 26.3 bits (57), Expect = 8.6, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%) Query: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN-YVADIEVD--GKQVELALW 58 K+ I G GK+ + SK E++ V EN Y D ++ ++ Sbjct: 2 KIAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIY 56 >1IY1-A nrPDB Length = 254 Score = 26.3 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 +++VG GKT L + + + + + V +V L++TA Sbjct: 52 VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 104 >1EZ4-A nrPDB Length = 318 Score = 26.3 bits (57), Expect = 9.2, Method: Composition-based stats. Identities = 8/13 (61%), Positives = 11/13 (84%) Query: 7 KLVIVGDGACGKT 19 K+V+VGDGA G + Sbjct: 7 KVVLVGDGAVGSS 19 >2YZ2-A nrPDB Length = 266 Score = 26.3 bits (57), Expect = 9.2, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 10/47 (21%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVE 54 L++ G+ GK+ LL + + + PT + + DG++ + Sbjct: 36 LLVAGNTGSGKSTLLQIVAG-----LIEPTSGD-----VLYDGERKK 72 >2BDT-A nrPDB Length = 189 Score = 26.3 bits (57), Expect = 9.2, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 4/47 (8%) Query: 5 RKKLVIV-GDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG 50 KKL I+ G GK+ + Y + + + + V G Sbjct: 1 MKKLYIITGPAGVGKSTTCKRLAAQLDNSAY---IEGDIINHMVVGG 44 >2GHI-A nrPDB Length = 260 Score = 26.3 bits (57), Expect = 9.3, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 9/21 (42%), Gaps = 3/21 (14%) Query: 8 LVIVGDGACGKTC---LLIVF 25 +VG GK+ LL F Sbjct: 49 CALVGHTGSGKSTIAKLLYRF 69 >6FKI-F nrPDB Length = 498 Score = 26.3 bits (57), Expect = 9.5, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 7 KLVIVGDGACGKTCLLIVFSKD 28 K+ + G GKT L++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188 >5NO4-Z nrPDB Length = 313 Score = 26.3 bits (57), Expect = 9.5, Method: Composition-based stats. Identities = 5/15 (33%), Positives = 6/15 (40%) Query: 12 GDGACGKTCLLIVFS 26 G GK+ LL Sbjct: 181 GQSGVGKSSLLNALL 195 >1JAL-A nrPDB Length = 363 Score = 26.3 bits (57), Expect = 9.6, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 10/22 (45%) Query: 6 KKLVIVGDGACGKTCLLIVFSK 27 K IVG GK+ L +K Sbjct: 3 FKCGIVGLPNVGKSTLFNALTK 24 >4UUD-B nrPDB Length = 864 Score = 25.9 bits (56), Expect = 9.7, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 8 LVIVGDGACGKTCLLIVFSKDQF 30 + +VG + GK+ +L F F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >3L43-A nrPDB Length = 319 Score = 25.9 bits (56), Expect = 9.7, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 8 LVIVGDGACGKTCLLIVFSKDQF 30 + +VG + GK+ +L F F Sbjct: 47 IAVVGGQSAGKSSVLENFVGRDF 69 >2DHR-A nrPDB Length = 499 Score = 25.9 bits (56), Expect = 9.7, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 8 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 +++VG GKT L + + + + + V +V L++TA Sbjct: 67 VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 119 >2AKA-B nrPDB Length = 299 Score = 25.9 bits (56), Expect = 9.8, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 8 LVIVGDGACGKTCLLIVFSKDQF 30 + +VG + GK+ +L F F Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDF 51 >2PCL-A nrPDB Length = 224 Score = 25.9 bits (56), Expect = 9.9, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 8 LVIVGDGACGKTCLLI 23 + I+G GK+ LL Sbjct: 33 VSIIGASGSGKSTLLY 48 >2YKR-W nrPDB Length = 350 Score = 25.9 bits (56), Expect = 10.0, Method: Composition-based stats. Identities = 5/15 (33%), Positives = 6/15 (40%) Query: 12 GDGACGKTCLLIVFS 26 G GK+ LL Sbjct: 214 GQSGVGKSSLLNALL 228 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.159 0.490 Lambda K H 0.267 0.0490 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,825,574 Number of Sequences: 36641 Number of extensions: 394703 Number of successful extensions: 2879 Number of sequences better than 10.0: 509 Number of HSP's better than 10.0 without gapping: 544 Number of HSP's successfully gapped in prelim test: 149 Number of HSP's that attempted gapping in prelim test: 1645 Number of HSP's gapped (non-prelim): 765 length of query: 193 length of database: 10,336,785 effective HSP length: 92 effective length of query: 101 effective length of database: 6,965,813 effective search space: 703547113 effective search space used: 703547113 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 57 (26.3 bits)