BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9NY33 (737 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3T6J-A nrPDB 1488 0.0 5YFB-A nrPDB 507 e-144 3CSK-A nrPDB 428 e-120 2C91-A nrPDB 32 0.75 5A3Y-A nrPDB 31 2.4 2W6E-A nrPDB 30 5.2 2IX4-A nrPDB 29 9.1 >3T6J-A nrPDB Length = 726 Score = 1488 bits (3852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 725/726 (99%), Positives = 725/726 (99%) Query: 1 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY Sbjct: 1 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60 Query: 61 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK Sbjct: 61 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120 Query: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED Sbjct: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180 Query: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR Sbjct: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240 Query: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW Sbjct: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300 Query: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP Sbjct: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360 Query: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ Sbjct: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420 Query: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE 480 REKLTFLEEDDKDLYILWKGPSFDVQVGLH LLGHGSGKLFVQDEKGAFNFDQETVINPE Sbjct: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHALLGHGSGKLFVQDEKGAFNFDQETVINPE 480 Query: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY Sbjct: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540 Query: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD Sbjct: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600 Query: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD Sbjct: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660 Query: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT Sbjct: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720 Query: 721 ADARFW 726 ADARFW Sbjct: 721 ADARFW 726 >5YFB-A nrPDB Length = 703 Score = 507 bits (1306), Expect = e-144, Method: Compositional matrix adjust. Identities = 293/695 (42%), Positives = 412/695 (59%), Gaps = 31/695 (4%) Query: 17 LDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYALLSRLFRAQDP-DQL 75 +D R++F LS E+LY ++++ A+W G + Q +P+A +Y LL F L Sbjct: 22 MDIRKSFDQLSSKEKLYTHYVTEASWAGARIIQAQWTPQATDLYDLLILTFSVNGKLADL 81 Query: 76 RQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPKEKLERVILGSEAAQQ 135 + GL+E++++A + Y V SN+ NYK+FG TK +P + EK E V+ S A Q Sbjct: 82 NALKTSSGLSEDDWEALIQYTVQVLSNLVNYKTFGFTKIIPRVDAEKFESVVKASSNADQ 141 Query: 136 HPEEVRGLWQTCGELMFSLEPR-LRHLGLGKEG-ITTYFSGNCTMEDAKL--AQDFLDSQ 191 L+ + +++L P +G K+G ++ Y+ G + DA++ Q+ + Sbjct: 142 G----SALFTKLKQHIYALSPESALFIGKRKDGHVSNYYLGE-PVGDAEVDAIQNVAEKL 196 Query: 192 NLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQVT--RG 249 + NTR+ K G+ Y + +AS S PS+ ++ +P ++T G Sbjct: 197 GVDILNTRVKKNGAGD----YTLLVASAKTSPPSV--------HDFQIDSTPAKLTIEYG 244 Query: 250 DYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVE 309 DYA L KVV L++AK Y AN HQ M+ Y++SF GSI HK S W++D GP+VE Sbjct: 245 DYASSLTKVVAALQEAKQYTANDHQSAMIEGYVKSFNSGSIPEHKAASTEWVKDIGPVVE 304 Query: 310 SYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFL 369 SYIGF+E+Y DP+G R E+EGF A+V+K +SAK+E LV A +L+K LPW FE D F Sbjct: 305 SYIGFVETYVDPYGGRAEWEGFTAIVDKQLSAKYEALVNGAPKLIKSLPWGTDFEVDVFR 364 Query: 370 TPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQREKLTFLEE 429 PDFT+L+V++FA GIPAGINIPNY ++R++ GFKNVSL N+LA E+LTF+ Sbjct: 365 KPDFTALEVVSFATGGIPAGINIPNYYEVRESTGFKNVSLANILAA--KVPNEELTFIHP 422 Query: 430 DDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPETGEQIQSWY 489 DD +LY W +F++QV HELLGHGSGKLF + G NFD E VINP TG+ I SWY Sbjct: 423 DDVELYNAWDSRAFELQVANHELLGHGSGKLFQEGADGKLNFDPEKVINPLTGKPITSWY 482 Query: 490 RSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGF-EGADAEDVIYVNWLNMVR 548 + G+T DS ++SS EECRAE+V LYL + +L+IF + + D ED+ Y+ +L M R Sbjct: 483 KPGQTPDSVLGEVSSSMEECRAETVALYLVSNLDILKIFNYVDKQDIEDIQYITFLLMAR 542 Query: 549 AGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPDARVRLDRS 608 AGL ALEFY P QAHMQAR I + L++AG + + + + VR+DR Sbjct: 543 AGLRALEFYDPATKKHGQAHMQARMGITQYLIQAGIARLELIQDANGE-LENLYVRVDRE 601 Query: 609 KIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKES 668 K+ S GK + + L LQV KST D G R Y T+T+ +RD VL +K Sbjct: 602 KVLSKGKEVVGQLLIELQVRKSTADGTGSRDF---YTTLTEPISGWEGKIRDIVLKKKLP 658 Query: 669 RKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSER 703 RK+ VQPNT + +VQL EY +AAG+I SF ER Sbjct: 659 RKIFVQPNTFVVNGEVQLKEYPLTAAGVIESFIER 693 >3CSK-A nrPDB Length = 711 Score = 428 bits (1100), Expect = e-120, Method: Compositional matrix adjust. Identities = 262/735 (35%), Positives = 418/735 (56%), Gaps = 62/735 (8%) Query: 4 TQYILPNDIGVSSLDCR-EAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYAL 62 + + +D +S L + E F L+ E+ YA+ +S+A+ G V+ Q S E+ I+ L Sbjct: 2 SHFFADHDAPLSMLSVKTEYFPQLTDKEQKYAHFMSKASHAGSRVVMRQVSHESEPIFDL 61 Query: 63 L----SRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNL 118 + S+L D + Q +++ +L Y + SN+GN+KSFGDTKF+P Sbjct: 62 ILAIHSKLNGKYPEDDITQ--------KQQTGLYLEYVSQFLSNLGNFKSFGDTKFIPRC 113 Query: 119 P----KEKLERVILGSEAAQ--------QHPEEVRGLWQTCGELM----FSLEPRLRHLG 162 K+ LE + ++ H L+ T EL+ + +E + LG Sbjct: 114 EVKFFKQLLELAKINPSSSPLTLSPVDVNHEFTSHHLFSTINELIDIGIYHVEEKAALLG 173 Query: 163 LGKEGITT--YFSGNCTMEDAKLAQDFLDSQ-NLSAYNTRLFKEVDGEGKPYYEVRLAS- 218 +G T+ Y T ED L ++ L ++ + NTR ++ G+ +++ +AS Sbjct: 174 FPSQGYTSAYYLGLPVTPEDMALLKEQLFAELAILPENTR----INKVGENSFQIWVASE 229 Query: 219 -----VLGSEPSLDSEVTSKLKSYEFRGSPFQVTRGDYAPILQKVVEQLEKAKAYAANSH 273 + + PS +++ + EF GD++ ++ V L++A+ +AAN Sbjct: 230 NVKNQITETYPSGQITLSNAVTKVEF-------IFGDHSREMRLVASYLKEAQKFAANDT 282 Query: 274 QGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPFGSRGEFEGFVA 333 Q ML +YI F GS +AHK + W++D P++E+ IGFIE+YR+P G GEFE VA Sbjct: 283 QKAMLQEYINHFVTGSSQAHKEAQKLWVKDISPVIETNIGFIETYREPSGIIGEFESLVA 342 Query: 334 VVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIP 393 + NK +AKF LV +AE+ + LPW +EK F PDFTSL+VLTF GSGIPAGINIP Sbjct: 343 IQNKERTAKFSSLVNNAEEFISLLPWSKDYEKPIFNPPDFTSLEVLTFTGSGIPAGINIP 402 Query: 394 NYDDLRQTEGFKNVSLGNVL-AVAYATQREKLTFLEEDDKDLYILWKGPSFDVQVGLHEL 452 NYDD+R GFKNVSLGN+L A A ++ + +F+ ++D+ ++ ++ SF+VQV +HEL Sbjct: 403 NYDDVRLKIGFKNVSLGNILSAAAKSSSKHPPSFISQEDRPIFEKYQSDSFEVQVDIHEL 462 Query: 453 LGHGSGKLFVQDEKGAFNFDQETVINPETGEQIQSWYRSGETWDSKFSTIASSYEECRAE 512 LGHGSGKL + G FNFD+E G+ + ++Y+ GETW SKF +A +EECRAE Sbjct: 463 LGHGSGKLLTEFTDG-FNFDKENPPLGLDGKPVSTYYKVGETWGSKFGQLAGPFEECRAE 521 Query: 513 SVGLYLCLHPQVLEIFGFEGADAED-VIYVNWLNMVRAGLLALEFYTPEAFNWRQAHMQA 571 + ++L + ++L+IFGF +++D VIY +L M RAGLLALE++ P+ W Q HMQA Sbjct: 522 VIAMFLLTNKKILDIFGFHDVESQDKVIYAGYLQMARAGLLALEYWNPKTGKWGQPHMQA 581 Query: 572 RFVILRVLLE--AGEGLVTITPTTGSDGRPDARVRLDRSKIRSVGKPALERFLRRLQVLK 629 RF I++ ++ + + + + +D D ++LD+S I++ G ++ +L+ L V K Sbjct: 582 RFSIMKTFMKHSTDKNFLKLEMNSTND---DFAIKLDKSLIKTAGHECVKDYLKHLHVYK 638 Query: 630 STGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESRKLIVQPNTRLEGSD-VQLLE 688 +GDV G + +TVT P+ +LRD VL ++ R+ +Q N+ ++ ++ V L E Sbjct: 639 CSGDVEQGSKYFIDRSTVT---PD-LASLRDIVLSKRLPRRQFIQSNSYIDDNNKVTLKE 694 Query: 689 YEASAAGLIRSFSER 703 Y+ + G+++SF +R Sbjct: 695 YDETPQGMLQSFLDR 709 >2C91-A nrPDB Length = 338 Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 14/154 (9%) Query: 154 LEPRLRHLGLGKEGITTY----FSGNCTMEDAKLAQD---FLDSQNLSAYNTRLFKEVDG 206 L P LRH GL +G ED Q F + Y R +KE Sbjct: 190 LLPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKDGKQPVGRFFGNNWAETYRNRFWKEHHF 249 Query: 207 EGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFRGSPFQVTRGDYAPILQKVVEQLEKAK 266 E E L + G+ +TS + + S Q TRGD + +EQLE+ Sbjct: 250 EAIALVEKALQTTYGTNAP---RMTSAALRWMYHHSQLQGTRGDAVILGMSSLEQLEQN- 305 Query: 267 AYAANSHQGQMLAQYIESFTQG-SIEAHKRGSRF 299 A + +G + +E+F Q ++ AH+ + F Sbjct: 306 --LAATEEGPLEPAVVEAFDQAWNMVAHECPNYF 337 >5A3Y-A nrPDB Length = 548 Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/34 (44%), Positives = 19/34 (55%) Query: 531 EGADAEDVIYVNWLNMVRAGLLALEFYTPEAFNW 564 +G D E V+YVN A ++ L F TPE NW Sbjct: 171 QGKDTEFVVYVNGDEASLAYVVNLNFLTPEPGNW 204 >2W6E-A nrPDB Length = 553 Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 3/54 (5%) Query: 183 LAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKS 236 L F+ ++NL A N+RL K E E R +LG++ S+D E T ++ S Sbjct: 26 LGSSFIAARNLHASNSRLQKTGTAEVSSILEER---ILGADTSVDLEETGRVLS 76 >2IX4-A nrPDB Length = 431 Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Query: 321 PFGSR-GEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDK 367 P+GS GEF+ + + +KA++ V +A++ L++ W PT E++K Sbjct: 66 PYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEK 113 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3T6J-A nrPDB 1240 0.0 5YFB-A nrPDB 978 0.0 3CSK-A nrPDB 963 0.0 Sequences not found previously or not previously below threshold: 6NRZ-A nrPDB 35 0.12 1F7U-A nrPDB 34 0.38 6FDU-A nrPDB 32 1.4 2X1L-A nrPDB 30 3.0 2NMV-A nrPDB 30 3.8 3DEZ-A nrPDB 30 4.0 4I6B-A nrPDB 29 7.2 CONVERGED! >3T6J-A nrPDB Length = 726 Score = 1240 bits (3208), Expect = 0.0, Method: Composition-based stats. Identities = 725/726 (99%), Positives = 725/726 (99%) Query: 1 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY Sbjct: 1 MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIY 60 Query: 61 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK Sbjct: 61 ALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPK 120 Query: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED Sbjct: 121 EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSGNCTMED 180 Query: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR Sbjct: 181 AKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEFR 240 Query: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW Sbjct: 241 GSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGSRFW 300 Query: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP Sbjct: 301 IQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWP 360 Query: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ Sbjct: 361 PTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATQ 420 Query: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPE 480 REKLTFLEEDDKDLYILWKGPSFDVQVGLH LLGHGSGKLFVQDEKGAFNFDQETVINPE Sbjct: 421 REKLTFLEEDDKDLYILWKGPSFDVQVGLHALLGHGSGKLFVQDEKGAFNFDQETVINPE 480 Query: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY Sbjct: 481 TGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGFEGADAEDVIY 540 Query: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD Sbjct: 541 VNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSDGRPD 600 Query: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD Sbjct: 601 ARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFLTLRD 660 Query: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT Sbjct: 661 TVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSERFPEDGPELEEILTQLAT 720 Query: 721 ADARFW 726 ADARFW Sbjct: 721 ADARFW 726 >5YFB-A nrPDB Length = 703 Score = 978 bits (2529), Expect = 0.0, Method: Composition-based stats. Identities = 293/707 (41%), Positives = 416/707 (58%), Gaps = 31/707 (4%) Query: 5 QYILPNDIGVSSLDCREAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYALLS 64 +++ + +D R++F LS E+LY ++++ A+W G + Q +P+A +Y LL Sbjct: 10 RFLADKSAPLCGMDIRKSFDQLSSKEKLYTHYVTEASWAGARIIQAQWTPQATDLYDLLI 69 Query: 65 RLFRAQDP-DQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPKEKL 123 F L + GL+E++++A + Y V SN+ NYK+FG TK +P + EK Sbjct: 70 LTFSVNGKLADLNALKTSSGLSEDDWEALIQYTVQVLSNLVNYKTFGFTKIIPRVDAEKF 129 Query: 124 ERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPR-LRHLGLGKEG-ITTYFSGNCTMEDA 181 E V+ S A Q L+ + +++L P +G K+G ++ Y+ G + DA Sbjct: 130 ESVVKASSNADQG----SALFTKLKQHIYALSPESALFIGKRKDGHVSNYYLGE-PVGDA 184 Query: 182 KL--AQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLGSEPSLDSEVTSKLKSYEF 239 ++ Q+ + + NTR+ K G+ Y + +AS S PS + ++ Sbjct: 185 EVDAIQNVAEKLGVDILNTRVKKNGAGD----YTLLVASAKTSPPS--------VHDFQI 232 Query: 240 RGSPFQVT--RGDYAPILQKVVEQLEKAKAYAANSHQGQMLAQYIESFTQGSIEAHKRGS 297 +P ++T GDYA L KVV L++AK Y AN HQ M+ Y++SF GSI HK S Sbjct: 233 DSTPAKLTIEYGDYASSLTKVVAALQEAKQYTANDHQSAMIEGYVKSFNSGSIPEHKAAS 292 Query: 298 RFWIQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKEL 357 W++D GP+VESYIGF+E+Y DP+G R E+EGF A+V+K +SAK+E LV A +L+K L Sbjct: 293 TEWVKDIGPVVESYIGFVETYVDPYGGRAEWEGFTAIVDKQLSAKYEALVNGAPKLIKSL 352 Query: 358 PWPPTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAY 417 PW FE D F PDFT+L+V++FA GIPAGINIPNY ++R++ GFKNVSL N+LA Sbjct: 353 PWGTDFEVDVFRKPDFTALEVVSFATGGIPAGINIPNYYEVRESTGFKNVSLANILAA-- 410 Query: 418 ATQREKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVI 477 E+LTF+ DD +LY W +F++QV HELLGHGSGKLF + G NFD E VI Sbjct: 411 KVPNEELTFIHPDDVELYNAWDSRAFELQVANHELLGHGSGKLFQEGADGKLNFDPEKVI 470 Query: 478 NPETGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLHPQVLEIFGF-EGADAE 536 NP TG+ I SWY+ G+T DS ++SS EECRAE+V LYL + +L+IF + + D E Sbjct: 471 NPLTGKPITSWYKPGQTPDSVLGEVSSSMEECRAETVALYLVSNLDILKIFNYVDKQDIE 530 Query: 537 DVIYVNWLNMVRAGLLALEFYTPEAFNWRQAHMQARFVILRVLLEAGEGLVTITPTTGSD 596 D+ Y+ +L M RAGL ALEFY P QAHMQAR I + L++AG + + + Sbjct: 531 DIQYITFLLMARAGLRALEFYDPATKKHGQAHMQARMGITQYLIQAGIARLELIQDANGE 590 Query: 597 GRPDARVRLDRSKIRSVGKPALERFLRRLQVLKSTGDVAGGRALYEGYATVTDAPPECFL 656 + VR+DR K+ S GK + + L LQV KST D G R Y T+T+ Sbjct: 591 -LENLYVRVDREKVLSKGKEVVGQLLIELQVRKSTADGTGSRDF---YTTLTEPISGWEG 646 Query: 657 TLRDTVLLRKESRKLIVQPNTRLEGSDVQLLEYEASAAGLIRSFSER 703 +RD VL +K RK+ VQPNT + +VQL EY +AAG+I SF ER Sbjct: 647 KIRDIVLKKKLPRKIFVQPNTFVVNGEVQLKEYPLTAAGVIESFIER 693 >3CSK-A nrPDB Length = 711 Score = 963 bits (2490), Expect = 0.0, Method: Composition-based stats. Identities = 262/735 (35%), Positives = 418/735 (56%), Gaps = 62/735 (8%) Query: 4 TQYILPNDIGVSSLDCR-EAFRLLSPTERLYAYHLSRAAWYGGLAVLLQTSPEAPYIYAL 62 + + +D +S L + E F L+ E+ YA+ +S+A+ G V+ Q S E+ I+ L Sbjct: 2 SHFFADHDAPLSMLSVKTEYFPQLTDKEQKYAHFMSKASHAGSRVVMRQVSHESEPIFDL 61 Query: 63 L----SRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNL 118 + S+L D + Q +++ +L Y + SN+GN+KSFGDTKF+P Sbjct: 62 ILAIHSKLNGKYPEDDITQ--------KQQTGLYLEYVSQFLSNLGNFKSFGDTKFIPRC 113 Query: 119 P----KEKLERVILGSEAAQ--------QHPEEVRGLWQTCGELM----FSLEPRLRHLG 162 K+ LE + ++ H L+ T EL+ + +E + LG Sbjct: 114 EVKFFKQLLELAKINPSSSPLTLSPVDVNHEFTSHHLFSTINELIDIGIYHVEEKAALLG 173 Query: 163 LGKEGITT--YFSGNCTMEDAKLAQDFLDSQ-NLSAYNTRLFKEVDGEGKPYYEVRLAS- 218 +G T+ Y T ED L ++ L ++ + NTR ++ G+ +++ +AS Sbjct: 174 FPSQGYTSAYYLGLPVTPEDMALLKEQLFAELAILPENTR----INKVGENSFQIWVASE 229 Query: 219 -----VLGSEPSLDSEVTSKLKSYEFRGSPFQVTRGDYAPILQKVVEQLEKAKAYAANSH 273 + + PS +++ + EF GD++ ++ V L++A+ +AAN Sbjct: 230 NVKNQITETYPSGQITLSNAVTKVEF-------IFGDHSREMRLVASYLKEAQKFAANDT 282 Query: 274 QGQMLAQYIESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPFGSRGEFEGFVA 333 Q ML +YI F GS +AHK + W++D P++E+ IGFIE+YR+P G GEFE VA Sbjct: 283 QKAMLQEYINHFVTGSSQAHKEAQKLWVKDISPVIETNIGFIETYREPSGIIGEFESLVA 342 Query: 334 VVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTPDFTSLDVLTFAGSGIPAGINIP 393 + NK +AKF LV +AE+ + LPW +EK F PDFTSL+VLTF GSGIPAGINIP Sbjct: 343 IQNKERTAKFSSLVNNAEEFISLLPWSKDYEKPIFNPPDFTSLEVLTFTGSGIPAGINIP 402 Query: 394 NYDDLRQTEGFKNVSLGNVL-AVAYATQREKLTFLEEDDKDLYILWKGPSFDVQVGLHEL 452 NYDD+R GFKNVSLGN+L A A ++ + +F+ ++D+ ++ ++ SF+VQV +HEL Sbjct: 403 NYDDVRLKIGFKNVSLGNILSAAAKSSSKHPPSFISQEDRPIFEKYQSDSFEVQVDIHEL 462 Query: 453 LGHGSGKLFVQDEKGAFNFDQETVINPETGEQIQSWYRSGETWDSKFSTIASSYEECRAE 512 LGHGSGKL + G FNFD+E G+ + ++Y+ GETW SKF +A +EECRAE Sbjct: 463 LGHGSGKLLTEFTDG-FNFDKENPPLGLDGKPVSTYYKVGETWGSKFGQLAGPFEECRAE 521 Query: 513 SVGLYLCLHPQVLEIFGFEGADAED-VIYVNWLNMVRAGLLALEFYTPEAFNWRQAHMQA 571 + ++L + ++L+IFGF +++D VIY +L M RAGLLALE++ P+ W Q HMQA Sbjct: 522 VIAMFLLTNKKILDIFGFHDVESQDKVIYAGYLQMARAGLLALEYWNPKTGKWGQPHMQA 581 Query: 572 RFVILRVLLE--AGEGLVTITPTTGSDGRPDARVRLDRSKIRSVGKPALERFLRRLQVLK 629 RF I++ ++ + + + + +D D ++LD+S I++ G ++ +L+ L V K Sbjct: 582 RFSIMKTFMKHSTDKNFLKLEMNSTND---DFAIKLDKSLIKTAGHECVKDYLKHLHVYK 638 Query: 630 STGDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESRKLIVQPNTRLEGSD-VQLLE 688 +GDV G + +TVT P+ +LRD VL ++ R+ +Q N+ ++ ++ V L E Sbjct: 639 CSGDVEQGSKYFIDRSTVT---PD-LASLRDIVLSKRLPRRQFIQSNSYIDDNNKVTLKE 694 Query: 689 YEASAAGLIRSFSER 703 Y+ + G+++SF +R Sbjct: 695 YDETPQGMLQSFLDR 709 >6NRZ-A nrPDB Length = 534 Score = 35.1 bits (79), Expect = 0.12, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 8/141 (5%) Query: 55 EAPYIYALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKF 114 +AP+I + + HA E E Q L V+++ G + + Sbjct: 343 KAPWIRMTMKESISVYGGVDVDLHADHELRKILETQTSLPEKTYVHASRGELIALLFDEL 402 Query: 115 VPNLPKEKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGKEGITTYFSG 174 V K ++ HP E L +T +L R LGKE Y Sbjct: 403 V--CDK------LIAPHHITDHPLETTPLCKTLRSGDETLVERFESFCLGKELCNAYSEL 454 Query: 175 NCTMEDAKLAQDFLDSQNLSA 195 N ++ KL ++ + + L+ Sbjct: 455 NDPLQQRKLLEEQMRKKALNP 475 >1F7U-A nrPDB Length = 607 Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 86/232 (37%), Gaps = 20/232 (8%) Query: 60 YALLSRLFRAQDPDQLRQHAL--AEGLTEEEYQAFLVYAAGVYSNMGN---YKSFGDTKF 114 Y + S + L+ L +GLT E+ A L+ +G KS G T + Sbjct: 288 YDVYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKFNKKLGKAIVQKSDGTTLY 347 Query: 115 VPN-----LPK-EKLERVILGSEAAQQHPEEVRGLWQTCGELMFSLEPRLRHLGLGK-EG 167 + + + EK + A Q ++ ++ F L+H+ G +G Sbjct: 348 LTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMGFEWAKDLQHVNFGMVQG 407 Query: 168 ITTYFSGNCTMEDAKLAQDFLDSQNLSAYNTRLFKEVDGEGKPYYEVRLASVLG-SEPSL 226 ++T +++ + ++ + + + K + + + +A ++G S + Sbjct: 408 MSTRKGTVVFLDN--ILEETKEKM-----HEVMKKNENKYAQIEHPEEVADLVGISAVMI 460 Query: 227 DSEVTSKLKSYEFRGSPFQVTRGDYAPILQKVVEQLEKAKAYAANSHQGQML 278 ++ +YEF+ GD P LQ +L + A+ Q + + Sbjct: 461 QDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKWI 512 >6FDU-A nrPDB Length = 266 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 408 SLGNVLAVAYATQREKLTFLEEDDKDLYILWKGPSFDVQVGLHELLGHGSG 458 SL N + ++E +F ++ D+ +Y + F V++ E++ GSG Sbjct: 158 SLYNYVMPPENMKKELQSFAQQLDQ-VYPAYDSKKFSVKIAAKEVIQRGSG 207 >2X1L-A nrPDB Length = 524 Score = 30.5 bits (67), Expect = 3.0, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 24/135 (17%) Query: 271 NSHQGQMLAQYIE----SFTQGSIEAHKRGSR-FW--IQDKGPI-VESYIGFI------- 315 NS Q L + + F + S H S+ W + D G I +++Y G+ Sbjct: 83 NSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAYKGWYSIRDERF 142 Query: 316 ----ESYRDPFGSRGEFEGFVAVVNKAMSAKFERLVASAEQLLKELPWPPTFEKDKFLTP 371 E+ P G+R E V F RL A ++LL E +F+ P Sbjct: 143 FTENETTEQPDGTRIATETGAPVTWTEEQTYFFRLSAYTDRLLALYE-----EHPEFIGP 197 Query: 372 DFTSLDVLTFAGSGI 386 D ++++F G+ Sbjct: 198 DARRNEIVSFVSGGL 212 >2NMV-A nrPDB Length = 661 Score = 30.1 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 56/153 (36%), Gaps = 13/153 (8%) Query: 113 KFVPNLPKEKLERVILGSEA-----AQQHPEEVRGLWQTCGELMF--SLEPRLRHLGLGK 165 K + N+ KE E++ + E AQ+ + R + E+ F +E RHL L Sbjct: 258 KAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRP 317 Query: 166 EGITTYFSGNCTMEDAKLAQDFLDSQNLSAYNTRLFKEVDGEGKP---YYEVRLASVLGS 222 G T Y + +D + +D +++ R D K + RL S L + Sbjct: 318 PGSTPYTLLDYFPDDFMI---VVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDN 374 Query: 223 EPSLDSEVTSKLKSYEFRGSPFQVTRGDYAPIL 255 P E + + + + ++ + Sbjct: 375 RPLRFEEFEKHMHNIVYVSATPGPYEIEHTDEM 407 >3DEZ-A nrPDB Length = 243 Score = 30.1 bits (66), Expect = 4.0, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 1/90 (1%) Query: 632 GDVAGGRALYEGYATVTDAPPECFLTLRDTVLLRKESRKLIVQPNTRLEGSDVQLLEYEA 691 + GG+ + G T+ L ++ L +E + + + L Y Sbjct: 22 ASMTGGQQMGRGSMTLAKDIARDLLDIKAVYLKPEEPFTWASGIKSPIYTDNRITLSYPE 81 Query: 692 SAAGLIRSFSERFPEDGPELEEILTQLATA 721 + + F E E PE+ E++ ATA Sbjct: 82 TRTLIENGFVETIKEAFPEV-EVIAGTATA 110 >4I6B-A nrPDB Length = 308 Score = 28.9 bits (63), Expect = 7.2, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 16/93 (17%) Query: 626 QVLKSTGDVAGGRALYEG---YATVTDAPPECFLTLRDTVLLRKESRKLIVQPNTRLEGS 682 +VL G A G Y + PP L++T +E+R P++ L Sbjct: 198 EVLNKQGHGAESDIWALGCVMYTMLLGRPPFETTNLKETYRSIREAR--YTMPSSLL--- 252 Query: 683 DVQLLEYEASAAGLIRSFSERFPEDGPELEEIL 715 A A LI S + PED P L++I+ Sbjct: 253 --------APAKHLIASMLSKNPEDRPSLDDII 277 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.129 0.338 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,053,633 Number of Sequences: 36641 Number of extensions: 1093482 Number of successful extensions: 2993 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 2945 Number of HSP's gapped (non-prelim): 25 length of query: 737 length of database: 10,336,785 effective HSP length: 104 effective length of query: 633 effective length of database: 6,526,121 effective search space: 4131034593 effective search space used: 4131034593 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 63 (28.9 bits)