BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9NX46 (363 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6D36-C nrPDB 743 0.0 2QTY-A nrPDB 669 0.0 6HOZ-A nrPDB 437 e-123 2WOE-A nrPDB 56 3e-08 6DRE-A nrPDB 54 1e-07 3G9D-A nrPDB 48 7e-06 5VOG-A nrPDB 35 0.051 5C5I-A nrPDB 34 0.12 5CIM-A nrPDB 30 2.2 2YB6-A nrPDB 29 2.6 6ED1-A nrPDB 29 4.0 6G28-A nrPDB 28 7.7 2KZT-A nrPDB 28 9.0 >6D36-C nrPDB Length = 366 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/363 (100%), Positives = 363/363 (100%) Query: 1 MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP 60 MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP Sbjct: 4 MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP 63 Query: 61 DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV 120 DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV Sbjct: 64 DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV 123 Query: 121 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL 180 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL Sbjct: 124 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL 183 Query: 181 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER 240 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER Sbjct: 184 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER 243 Query: 241 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS 300 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS Sbjct: 244 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS 303 Query: 301 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF 360 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF Sbjct: 304 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF 363 Query: 361 QKS 363 QKS Sbjct: 364 QKS 366 >2QTY-A nrPDB Length = 347 Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/345 (92%), Positives = 333/345 (96%) Query: 19 SLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYTDD 78 S+SRFRGCLAGALLGDCVG+ YEAHDTV L SVL HV+SLEPDPGTPGS RTE LYYTDD Sbjct: 3 SISRFRGCLAGALLGDCVGAVYEAHDTVSLASVLSHVESLEPDPGTPGSARTETLYYTDD 62 Query: 79 TAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVFEP 138 TAM RALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV+TVFKKLLNPKCRDV+EP Sbjct: 63 TAMTRALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVITVFKKLLNPKCRDVYEP 122 Query: 139 ARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQALAV 198 ARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQALAV Sbjct: 123 ARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQALAV 182 Query: 199 HLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQASV 258 HLALQG SSSEHFL+QLLGHME+LEGDAQSVLDA+ELGMEERPYSSRLKK+GELLDQ V Sbjct: 183 HLALQGVSSSEHFLEQLLGHMEELEGDAQSVLDAKELGMEERPYSSRLKKVGELLDQDVV 242 Query: 259 TREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTDTI 318 +REEVVSELGNGIAAFESVPTAIYCFLRCMEP PEIPS FNSLQRTLIYSISLGGDTDTI Sbjct: 243 SREEVVSELGNGIAAFESVPTAIYCFLRCMEPHPEIPSTFNSLQRTLIYSISLGGDTDTI 302 Query: 319 ATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVFQKS 363 ATMAGAIAGAYYGM+QVPESWQQSCEG+EETD+LAQSLHRVFQ+S Sbjct: 303 ATMAGAIAGAYYGMEQVPESWQQSCEGFEETDVLAQSLHRVFQES 347 >6HOZ-A nrPDB Length = 350 Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust. Identities = 222/351 (63%), Positives = 265/351 (75%), Gaps = 9/351 (2%) Query: 15 GAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALY 74 G SL++ RG L GALLGDC+G+ +E D V+L VL V+ LE + ++ L+ Sbjct: 1 GPMVSLAQVRGALCGALLGDCMGAEFEGSDAVELPDVLEFVRLLEKE------KKAGTLF 54 Query: 75 YTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRD 134 YTDDTAM RA++QSL+AK FDEVDMA RFA+EYKK+P RGYGAGVV VFKKLL+PK D Sbjct: 55 YTDDTAMTRAVIQSLIAKPDFDEVDMAKRFAEEYKKEPTRGYGAGVVQVFKKLLSPKYSD 114 Query: 135 VFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQ 194 VF+PAR QF+GKGSYGNGGAMRVA I+LAY ++QDV KFAR SAQLTHAS LGYNGAILQ Sbjct: 115 VFQPAREQFDGKGSYGNGGAMRVASIALAYPNIQDVIKFARRSAQLTHASPLGYNGAILQ 174 Query: 195 ALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER---PYSSRLKKIGE 251 ALAVH ALQGE + FL+QL+G ME +EG S DA E P+ SRLKKI E Sbjct: 175 ALAVHFALQGELKRDTFLEQLIGEMERIEGGEMSASDAGEHDRPNEVKLPFCSRLKKIKE 234 Query: 252 LLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISL 311 L ++V + ++V ELG+GIAA ESVPTAIY FL CME DP+IP +N+LQRT+IYSISL Sbjct: 235 FLASSNVPKADIVDELGHGIAALESVPTAIYSFLHCMESDPDIPDLYNNLQRTIIYSISL 294 Query: 312 GGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVFQK 362 GGDTDTIATMAGAIAGAYYGMDQV SW++SCE ET+ A L+ ++ K Sbjct: 295 GGDTDTIATMAGAIAGAYYGMDQVTPSWKRSCEAIVETEESAVKLYELYCK 345 >2WOE-A nrPDB Length = 299 Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 69/281 (24%), Positives = 104/281 (37%), Gaps = 58/281 (20%) Query: 76 TDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDV 135 TDDT M+ AL +SL AK D D+ FA K P V V R + Sbjct: 64 TDDTEMSLALGRSLAAKGTLDVADICEEFALWLKSRP--------VNVGNTCRRGIRRYM 115 Query: 136 FEPARAQFNGKGSYGNGGAMRVAGISLA-YSSVQDVQKFARLSAQLTHASSLGYNGAILQ 194 E +G GNG AMR +LA D++ + A++TH L + Sbjct: 116 HEGTTTAPYSEGDAGNGAAMRCLPAALATLGHPADLEPWVLAQARITHNHPLSDAACLTL 175 Query: 195 ALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVL-DARELGMEERPYSSRLKKIGELL 253 VH + G M+ +A ++ R+ E PY Sbjct: 176 GRMVHHLIGGRG------------MKACREEANRLVHQHRDFHFE--PYKG--------- 212 Query: 254 DQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGG 313 Q+S +++ T ++ + + F S LI +++ GG Sbjct: 213 -QSSAY-------------IVDTMQTVLHYYF--------VTDTFKS---CLIQTVNQGG 247 Query: 314 DTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQ 354 D DT +AG +AGA YG+D +P W + E +I Q Sbjct: 248 DADTTGALAGMLAGATYGVDDIPSGWLSKLDMKVEREIRRQ 288 >6DRE-A nrPDB Length = 366 Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/348 (22%), Positives = 134/348 (38%), Gaps = 64/348 (18%) Query: 17 ARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYT 76 + SL + +G L G +GD +G+ E L HV D G R + +T Sbjct: 66 SESLDKAKGALVGLAIGDAIGTTLEFLPRDKL-----HVN----DMVGGGPFRLQPGEWT 116 Query: 77 DDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVF 136 DDT+MA L +S ++ D + + Y+ + G +C D+ Sbjct: 117 DDTSMALCLAESYISAGRLDITLFREKLVRWYRHGENSSNG-------------RCFDIG 163 Query: 137 EPARAQF-----NGKGSYGNG---GAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGY 188 R +G +GN A A I A +S+ F R S Q T A S Sbjct: 164 NTTRNALEQYLKHGASWFGNTEPETAGNAAIIRQAPTSI-----FRRKSLQRTFADSDS- 217 Query: 189 NGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKK 248 Q++A H A + +S + FL +L ++ + G ++ + P R+ Sbjct: 218 -----QSMATHCAPESMASCQ-FLGFILNYL--INGSSRE----KAFSPHVMPLPVRV-- 263 Query: 249 IGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYS 308 LL A +E+ E+ + +++ A++ ++ ++ + Sbjct: 264 ---LLINAGEYKEKKRDEIRSSGYVIDTLEAAMWAVWNT-----------DNFHDAILLA 309 Query: 309 ISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSL 356 +LG D D++A G IAGA YG +P+ W E LA+ L Sbjct: 310 ANLGDDADSVAATTGQIAGALYGYSNIPKPWLDKLVQQERISNLAEQL 357 >3G9D-A nrPDB Length = 297 Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 73/340 (21%), Positives = 135/340 (39%), Gaps = 66/340 (19%) Query: 17 ARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYT 76 +R+L + G G LG V F + V +H++ G + A T Sbjct: 8 SRALGAYLGLACGDALGATV-EFLTKGEIAHQYGVHKHIKG-------GGWLKLPAGQVT 59 Query: 77 DDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVF 136 DDT M+ L +++LA +D A FA K P V V R + Sbjct: 60 DDTEMSIHLGRAILAAPEWDARRAAEEFAVWLKGVP--------VDVGDTTRRGIRRFIM 111 Query: 137 EPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQAL 196 ++ + GNG AMR + +A +++ D F R + + H + + A+ A Sbjct: 112 HGTLSEPESEYHAGNGAAMR--NLPVALATLGDDAAFERWTVEQAHIT---HCNAMSDAA 166 Query: 197 AVHLALQGESSSEHFLKQLL--GHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLD 254 + L H +++L+ G + D+ D + L A+ + +PY L Sbjct: 167 TLTLG--------HMVRRLVLGGDVRDVR-DESNKLIAKHRQFKFQPYRG--------LA 209 Query: 255 QASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGD 314 A + +++ T ++ + + +S++ ++ +++ GGD Sbjct: 210 TAYIV---------------DTMQTVMHYYFQT-----------DSVESCVVETVNQGGD 243 Query: 315 TDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQ 354 DT +AG +AGA YG++ +P W + + +I AQ Sbjct: 244 ADTTGAIAGMLAGATYGVETIPPRWLRKLDRDVYNEICAQ 283 >5VOG-A nrPDB Length = 183 Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Query: 5 AMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGT 64 AM A GGG AR L C + ++Y++ + +T ++ VQ L+P P Sbjct: 40 AMIAIGGGGFIPARMLR----CFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEV 95 Query: 65 PGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMA 101 + + DD+ + L KE FD V +A Sbjct: 96 LRGKNVLVVDEVDDSRVTMEFCLKELLKEDFDTVGVA 132 >5C5I-A nrPDB Length = 316 Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 23/141 (16%) Query: 207 SSEHFLKQLLGHME------DLEGDAQSVLDARELGMEERPYSSRLKKI--GELLDQASV 258 + E L+++LG +E L G+ + +LDAR L P +++ G +LD A++ Sbjct: 183 AGEETLERMLGQVEILVCLLPLTGETRGLLDARRLAC--LPEGAQIVNFARGPILDSAAL 240 Query: 259 TREEVVSELGNGIA-AFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTDT 317 +G+ + FE +EP PE + + T++ IS D +T Sbjct: 241 IEALDSGRIGHAVLDVFE------------VEPLPEASPFWGHPKVTVLPHISAATDPET 288 Query: 318 IATMAGAIAGAYYGMDQVPES 338 + + GA Y ++P S Sbjct: 289 ASAIVGAHVADYRATGRIPPS 309 >5CIM-A nrPDB Length = 698 Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 9/52 (17%) Query: 28 AGALLGDCVGS----FYEAHDTVDLTSVLRHVQSLEPD-----PGTPGSERT 70 A A++G+ V + E HD V T V+R+ + PD PG PG++RT Sbjct: 23 AKAVVGEVVPVAATVWREGHDAVAATLVVRYHGTTYPDLADPPPGVPGADRT 74 >2YB6-A nrPDB Length = 152 Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%) Query: 45 TVDLTSVLRHVQSL--EPDPGTPGSERTEALY 74 T D++S+L +QSL EP+P +P + + LY Sbjct: 99 TYDVSSILTSIQSLLDEPNPNSPANSQAAQLY 130 >6ED1-A nrPDB Length = 879 Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%) Query: 98 VDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNP-KCRD---------VFEPARAQFNGKG 147 VD+ H + D RGY G+ KKL P + RD V A NGK Sbjct: 56 VDLPHTWNAGDVIDEQRGYRRGISWYRKKLFIPSEARDKKITLRFDGVASKADVYLNGKL 115 Query: 148 SYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLG 187 + GA G+ + + + +V K L+ ++ ++SSLG Sbjct: 116 LKTHLGAYTAFGVDI--TDICEVGKENLLAVKVDNSSSLG 153 >6G28-A nrPDB Length = 367 Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 13/129 (10%) Query: 76 TDDTAMARALVQSLL-AKEAFDEVDMAHRFAQEYK---KDPDRGYGAGVVTVFKKL-LNP 130 +DDT M A ++L+ A +A + + A+ Y+ +D D G G +V + L P Sbjct: 64 SDDTVMHLATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMD-GRAPGGASVHNAMQLKP 122 Query: 131 KCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAY---SSVQDVQKFARLSAQLTHASSLG 187 + + R FN G G AMR I L + S + + + + S ++TH G Sbjct: 123 GKPNGW---RIPFNSHEG-GCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHHHPTG 178 Query: 188 YNGAILQAL 196 Y GA+ AL Sbjct: 179 YLGALASAL 187 >2KZT-A nrPDB Length = 163 Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Query: 178 AQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGM 237 A++ +LG + + LAV LAL+G++S +LL DL G S D Sbjct: 30 AEMLRDLNLGEMKSGVPVLAVSLALEGKASHREMTSKLLS---DLCGTVMSTTDV----- 81 Query: 238 EERPYSSRLKKIGEL 252 E+ + LK + EL Sbjct: 82 -EKSFDKLLKDLPEL 95 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6D36-C nrPDB 513 e-146 2QTY-A nrPDB 487 e-138 6HOZ-A nrPDB 454 e-128 6DRE-A nrPDB 315 1e-86 3G9D-A nrPDB 299 9e-82 2WOE-A nrPDB 297 5e-81 Sequences not found previously or not previously below threshold: 6G28-A nrPDB 71 6e-13 5TWT-A nrPDB 35 0.075 3ZXU-B nrPDB 30 1.9 4UMW-A nrPDB 29 3.6 5EZ7-A nrPDB 28 6.1 >6D36-C nrPDB Length = 366 Score = 513 bits (1320), Expect = e-146, Method: Composition-based stats. Identities = 363/363 (100%), Positives = 363/363 (100%) Query: 1 MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP 60 MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP Sbjct: 4 MAAAAMAAAAGGGAGAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEP 63 Query: 61 DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV 120 DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV Sbjct: 64 DPGTPGSERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV 123 Query: 121 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL 180 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL Sbjct: 124 VTVFKKLLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQL 183 Query: 181 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER 240 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER Sbjct: 184 THASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER 243 Query: 241 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS 300 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS Sbjct: 244 PYSSRLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNS 303 Query: 301 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF 360 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF Sbjct: 304 LQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVF 363 Query: 361 QKS 363 QKS Sbjct: 364 QKS 366 >2QTY-A nrPDB Length = 347 Score = 487 bits (1252), Expect = e-138, Method: Composition-based stats. Identities = 319/347 (91%), Positives = 333/347 (95%) Query: 17 ARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYT 76 S+SRFRGCLAGALLGDCVG+ YEAHDTV L SVL HV+SLEPDPGTPGS RTE LYYT Sbjct: 1 MASISRFRGCLAGALLGDCVGAVYEAHDTVSLASVLSHVESLEPDPGTPGSARTETLYYT 60 Query: 77 DDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVF 136 DDTAM RALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGV+TVFKKLLNPKCRDV+ Sbjct: 61 DDTAMTRALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVITVFKKLLNPKCRDVY 120 Query: 137 EPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQAL 196 EPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQAL Sbjct: 121 EPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQAL 180 Query: 197 AVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLDQA 256 AVHLALQG SSSEHFL+QLLGHME+LEGDAQSVLDA+ELGMEERPYSSRLKK+GELLDQ Sbjct: 181 AVHLALQGVSSSEHFLEQLLGHMEELEGDAQSVLDAKELGMEERPYSSRLKKVGELLDQD 240 Query: 257 SVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDTD 316 V+REEVVSELGNGIAAFESVPTAIYCFLRCMEP PEIPS FNSLQRTLIYSISLGGDTD Sbjct: 241 VVSREEVVSELGNGIAAFESVPTAIYCFLRCMEPHPEIPSTFNSLQRTLIYSISLGGDTD 300 Query: 317 TIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVFQKS 363 TIATMAGAIAGAYYGM+QVPESWQQSCEG+EETD+LAQSLHRVFQ+S Sbjct: 301 TIATMAGAIAGAYYGMEQVPESWQQSCEGFEETDVLAQSLHRVFQES 347 >6HOZ-A nrPDB Length = 350 Score = 454 bits (1166), Expect = e-128, Method: Composition-based stats. Identities = 222/351 (63%), Positives = 265/351 (75%), Gaps = 9/351 (2%) Query: 15 GAARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALY 74 G SL++ RG L GALLGDC+G+ +E D V+L VL V+ LE + ++ L+ Sbjct: 1 GPMVSLAQVRGALCGALLGDCMGAEFEGSDAVELPDVLEFVRLLEKE------KKAGTLF 54 Query: 75 YTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRD 134 YTDDTAM RA++QSL+AK FDEVDMA RFA+EYKK+P RGYGAGVV VFKKLL+PK D Sbjct: 55 YTDDTAMTRAVIQSLIAKPDFDEVDMAKRFAEEYKKEPTRGYGAGVVQVFKKLLSPKYSD 114 Query: 135 VFEPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQ 194 VF+PAR QF+GKGSYGNGGAMRVA I+LAY ++QDV KFAR SAQLTHAS LGYNGAILQ Sbjct: 115 VFQPAREQFDGKGSYGNGGAMRVASIALAYPNIQDVIKFARRSAQLTHASPLGYNGAILQ 174 Query: 195 ALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEER---PYSSRLKKIGE 251 ALAVH ALQGE + FL+QL+G ME +EG S DA E P+ SRLKKI E Sbjct: 175 ALAVHFALQGELKRDTFLEQLIGEMERIEGGEMSASDAGEHDRPNEVKLPFCSRLKKIKE 234 Query: 252 LLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISL 311 L ++V + ++V ELG+GIAA ESVPTAIY FL CME DP+IP +N+LQRT+IYSISL Sbjct: 235 FLASSNVPKADIVDELGHGIAALESVPTAIYSFLHCMESDPDIPDLYNNLQRTIIYSISL 294 Query: 312 GGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLHRVFQK 362 GGDTDTIATMAGAIAGAYYGMDQV SW++SCE ET+ A L+ ++ K Sbjct: 295 GGDTDTIATMAGAIAGAYYGMDQVTPSWKRSCEAIVETEESAVKLYELYCK 345 >6DRE-A nrPDB Length = 366 Score = 315 bits (807), Expect = 1e-86, Method: Composition-based stats. Identities = 79/349 (22%), Positives = 134/349 (38%), Gaps = 64/349 (18%) Query: 17 ARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYT 76 + SL + +G L G +GD +G+ E L HV D G R + +T Sbjct: 66 SESLDKAKGALVGLAIGDAIGTTLEFLPRDKL-----HVN----DMVGGGPFRLQPGEWT 116 Query: 77 DDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVF 136 DDT+MA L +S ++ D + + Y+ + G +C D+ Sbjct: 117 DDTSMALCLAESYISAGRLDITLFREKLVRWYRHGENSSNG-------------RCFDIG 163 Query: 137 EPARAQF-----NGKGSYGNG---GAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGY 188 R +G +GN A A I A +S+ F R S Q T A S Sbjct: 164 NTTRNALEQYLKHGASWFGNTEPETAGNAAIIRQAPTSI-----FRRKSLQRTFADSDS- 217 Query: 189 NGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRLKK 248 Q++A H A + +S + FL +L ++ + G ++ + P R+ Sbjct: 218 -----QSMATHCAPESMASCQ-FLGFILNYL--INGSSRE----KAFSPHVMPLPVRV-- 263 Query: 249 IGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYS 308 LL A +E+ E+ + +++ A++ ++ ++ + Sbjct: 264 ---LLINAGEYKEKKRDEIRSSGYVIDTLEAAMWAVWNT-----------DNFHDAILLA 309 Query: 309 ISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQSLH 357 +LG D D++A G IAGA YG +P+ W E LA+ L Sbjct: 310 ANLGDDADSVAATTGQIAGALYGYSNIPKPWLDKLVQQERISNLAEQLF 358 >3G9D-A nrPDB Length = 297 Score = 299 bits (766), Expect = 9e-82, Method: Composition-based stats. Identities = 73/340 (21%), Positives = 134/340 (39%), Gaps = 66/340 (19%) Query: 17 ARSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEALYYT 76 +R+L + G G LG V F + V +H++ G + A T Sbjct: 8 SRALGAYLGLACGDALGATV-EFLTKGEIAHQYGVHKHIKG-------GGWLKLPAGQVT 59 Query: 77 DDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVF 136 DDT M+ L +++LA +D A FA K P V V R + Sbjct: 60 DDTEMSIHLGRAILAAPEWDARRAAEEFAVWLKGVP--------VDVGDTTRRGIRRFIM 111 Query: 137 EPARAQFNGKGSYGNGGAMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQAL 196 ++ + GNG AMR + +A +++ D F R + + H + + A+ A Sbjct: 112 HGTLSEPESEYHAGNGAAMR--NLPVALATLGDDAAFERWTVEQAHIT---HCNAMSDAA 166 Query: 197 AVHLALQGESSSEHFLKQLL--GHMEDLEGDAQSVLDARELGMEERPYSSRLKKIGELLD 254 + L H +++L+ G + D+ D + L A+ + +PY L Sbjct: 167 TLTLG--------HMVRRLVLGGDVRDVR-DESNKLIAKHRQFKFQPYRG--------LA 209 Query: 255 QASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGD 314 A +++ T ++ + + +S++ ++ +++ GGD Sbjct: 210 TA---------------YIVDTMQTVMHYYFQT-----------DSVESCVVETVNQGGD 243 Query: 315 TDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQ 354 DT +AG +AGA YG++ +P W + + +I AQ Sbjct: 244 ADTTGAIAGMLAGATYGVETIPPRWLRKLDRDVYNEICAQ 283 >2WOE-A nrPDB Length = 299 Score = 297 bits (760), Expect = 5e-81, Method: Composition-based stats. Identities = 77/348 (22%), Positives = 120/348 (34%), Gaps = 67/348 (19%) Query: 11 GGGAGAA---RSLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQSLEPDPGTPGS 67 G G + R+L F G G LG V F + + R G Sbjct: 4 GSMTGPSVHDRALGAFLGLAVGDALGATV-EFMTKGEIAQQYGIHR-------KMTGGGW 55 Query: 68 ERTEALYYTDDTAMARALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKL 127 R + TDDT M+ AL +SL AK D D+ FA K P V V Sbjct: 56 LRLKPGQITDDTEMSLALGRSLAAKGTLDVADICEEFALWLKSRP--------VNVGNTC 107 Query: 128 LNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLA-YSSVQDVQKFARLSAQLTHASSL 186 R + E +G GNG AMR +LA D++ + A++TH L Sbjct: 108 RRGIRRYMHEGTTTAPYSEGDAGNGAAMRCLPAALATLGHPADLEPWVLAQARITHNHPL 167 Query: 187 GYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYSSRL 246 + VH + G M+ +A ++ + PY + Sbjct: 168 SDAACLTLGRMVHHLIGGRG------------MKACREEANRLV-HQHRDFHFEPYKGQ- 213 Query: 247 KKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLI 306 + +++ T ++ + ++ + LI Sbjct: 214 ----------------------SSAYIVDTMQTVLHYYFVT-----------DTFKSCLI 240 Query: 307 YSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQ 354 +++ GGD DT +AG +AGA YG+D +P W + E +I Q Sbjct: 241 QTVNQGGDADTTGALAGMLAGATYGVDDIPSGWLSKLDMKVEREIRRQ 288 >6G28-A nrPDB Length = 367 Score = 71.2 bits (172), Expect = 6e-13, Method: Composition-based stats. Identities = 67/372 (18%), Positives = 128/372 (34%), Gaps = 51/372 (13%) Query: 20 LSRFRGCLAGALLGDCVG------SFYEAHDTVDLTSVLRHVQSLEPDPGTPGSERTEAL 73 + ++ + + GD +G F + + + G + + Sbjct: 11 MEKYVAAMVLSAAGDALGYYNGKWEFLQDGEKIH-----------RQLAQLGGLDALDVG 59 Query: 74 YY--TDDTAMARALVQSLLAKEAFDEV-----DMAHRFAQEYKKDPDRGYGAGVVTVFKK 126 + +DDT M A ++L+ ++ +A + + R G V + Sbjct: 60 RWRVSDDTVMHLATAEALVEAGKAPKLTQLYYLLAKHYQDCMEDMDGRAPGGASVHNAMQ 119 Query: 127 LLNPKCRDVFEPARAQFNGKGSYGNGGAMRVAGISLAYSS---VQDVQKFARLSAQLTHA 183 L K R FN G G AMR I L + + + + + S ++TH Sbjct: 120 LKPGKP----NGWRIPFNSH-EGGCGAAMRAMCIGLRFPHHSQLDTLIQVSIESGRMTHH 174 Query: 184 SSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDARELGMEERPYS 243 GY GA+ AL A+ L+ G ME L + ++ + E + Sbjct: 175 HPTGYLGALASALFTAYAVNSRPP----LQWGKGLMELLPEAKKYIVQSGYFVEENLQHW 230 Query: 244 SRLK-------KIGELLDQASVTR------EEVVSELGNGIAAFESVPTAIYCFLRCMEP 290 S + K+ +LD S + + ++ ++ + M Sbjct: 231 SYFQTKWENYLKLRGILDGESAPTFPESFGVKERDQFYTSLSYSGWGGSSGHD--APMIA 288 Query: 291 DPEIPSAFNSLQRTLIYSISLGGDTDTIATMAGAIAGAYYGMDQVPESWQQSCEGYEETD 350 + +A +S + + GGD+D+ A +AG G YG V S + E + Sbjct: 289 YDAVLAAGDSWKELAHRAFFHGGDSDSTAAIAGCWWGVMYGFKGVSPSNYEKLEYRNRLE 348 Query: 351 ILAQSLHRVFQK 362 A++L+ + K Sbjct: 349 ETARALYSLGSK 360 >5TWT-A nrPDB Length = 331 Score = 34.6 bits (77), Expect = 0.075, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 60/185 (32%), Gaps = 9/185 (4%) Query: 25 GCLAGALLGDCVGSFYEAH--DTVDLTSVLRHVQSLEPDPGTPGSERTEALYYTDDTAMA 82 G L G + D + + EA TV +L V + + G T L D T + Sbjct: 108 GSLRGFGVIDNIKAQVEALCPQTVSCADILA-VAARDSVVALGGPSWTVPLGRRDSTNSS 166 Query: 83 RALVQSLLAKEAFDEVDMAHRFAQEYKKDPDRGYGAGVVTVFKKLLNPKCRDVFEPARAQ 142 AL S L F+ + F + D +G T+ + + EP Sbjct: 167 AALANSDLPPPQFNLSQLITAFGNKNLDPTDLVALSGAHTIGQAQCLNFRAHITEPNINP 226 Query: 143 FNGKGSYGN----GGAMRVAGISLAYSSVQDVQKFARLSAQLT--HASSLGYNGAILQAL 196 N GG +A + + + D + L Q H+ +N A + Sbjct: 227 TFAASLRANCPATGGDTNLAPLDVTTPNTFDNAYYTNLLNQRGLLHSDQELFNNASTDST 286 Query: 197 AVHLA 201 + A Sbjct: 287 VRNFA 291 >3ZXU-B nrPDB Length = 270 Score = 29.9 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 245 RLKKIGELLDQASVTREEVVSELGNGIAAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRT 304 R+K++ E + V + + N I + + + +C+ P PE N +Q+ Sbjct: 190 RIKELHEQMISKIVEASKFIRASNNTITLND-LEVSFHCYWNLPSPYPETLILTNKVQKI 248 Query: 305 LIYSISLGG 313 L + I G Sbjct: 249 LDFLIYQYG 257 >4UMW-A nrPDB Length = 732 Score = 28.8 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 154 AMRVAGISLAYSSVQDVQKFARLSAQLTHASSLGYNGAILQALAVH 199 AM+ A I +A S DV A LTH G I A A H Sbjct: 635 AMKAAAIGIAMGSGTDV-ALETADAALTHNHLRGLVQMIELARATH 679 >5EZ7-A nrPDB Length = 392 Score = 28.0 bits (60), Expect = 6.1, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 10/62 (16%) Query: 305 LIYSISLGGDTDTIA----------TMAGAIAGAYYGMDQVPESWQQSCEGYEETDILAQ 354 L+ S SLGG + + GA+ GA + +P W+ E D+ Sbjct: 35 LVESASLGGGQSVKSQGIIHGGAKYALHGALTGASEAIADMPRRWRACLGSDGELDLRGV 94 Query: 355 SL 356 L Sbjct: 95 RL 96 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.304 0.109 0.254 Lambda K H 0.267 0.0333 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,261,613 Number of Sequences: 36641 Number of extensions: 354929 Number of successful extensions: 2316 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1935 Number of HSP's gapped (non-prelim): 143 length of query: 363 length of database: 10,336,785 effective HSP length: 98 effective length of query: 265 effective length of database: 6,745,967 effective search space: 1787681255 effective search space used: 1787681255 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 59 (27.6 bits)