BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9NWT6 (349 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4Z1V-A nrPDB 730 0.0 3AL6-A nrPDB 74 1e-13 5NFN-A nrPDB 61 9e-10 4QU2-A nrPDB 60 2e-09 4QSZ-A nrPDB 59 3e-09 2RAA-A nrPDB 31 0.80 5JNQ-A nrPDB 31 0.83 5ZA4-A nrPDB 30 1.2 3K5S-A nrPDB 30 1.3 1R0L-A nrPDB 30 2.1 3HOA-A nrPDB 28 4.7 5KAQ-A nrPDB 28 5.3 2MYJ-A nrPDB 28 5.5 2XDV-A nrPDB 28 7.5 2CXB-A nrPDB 28 8.5 >4Z1V-A nrPDB Length = 352 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 1 MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEE 60 MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEE Sbjct: 4 MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEE 63 Query: 61 PVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNR 120 PVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNR Sbjct: 64 PVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNR 123 Query: 121 EEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWG 180 EEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWG Sbjct: 124 EEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWG 183 Query: 181 QLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQS 240 QLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQS Sbjct: 184 QLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQS 243 Query: 241 QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 300 QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA Sbjct: 244 QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 303 Query: 301 PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN 349 PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN Sbjct: 304 PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN 352 >3AL6-A nrPDB Length = 338 Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 45/278 (16%) Query: 41 PIPRLS--QSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTH 98 P+PRL + + L +P+VL +L KW ++YL + G + ++ A+ Sbjct: 30 PVPRLEGVSREQFMQHLYPQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVA 89 Query: 99 KFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQR----GGEERLYLQQTLNDTV 154 + + +NF R+ + F + V++ + + + +E+ YL+ D Sbjct: 90 QMDFIS-------KNFVYRT----LPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDP- 137 Query: 155 GRKIVMDFLGFNWNWINKQ----QGKRGW------GQLTSNLLLIGMEGNVTPAHYDEQQ 204 RK V D I KQ +G + Q S++ I G HYD Sbjct: 138 -RKDVAD--------IRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMD 188 Query: 205 NFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETV 264 N Q+ G KR +LF P + LY + ++ DNPD ++P F YE Sbjct: 189 NLLIQVTGKKRVVLFSPRDAQYLY-----LKGTKSEVLNIDNPDLAKYPLFSKARRYECS 243 Query: 265 VGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGAPT 302 + GDVL+IP W+H++ S G + VN ++K P+ Sbjct: 244 LEAGDVLFIPALWFHNVISEEFG---VGVNIFWKHLPS 278 >5NFN-A nrPDB Length = 335 Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 48/274 (17%) Query: 61 PVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSN 119 P ++ + +PAL KW L Y + +G+ + SV Y D + F P Sbjct: 70 PCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDG---YADAVRGDRF--MMPAER 124 Query: 120 REEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGR--KIVMDFLGFNWNWINKQQGKR 177 R + F ++ L+ Q G LY+Q+ ++ +++ D L + W ++ GK Sbjct: 125 RLPLSF--VLDVLEGRAQHPG--VLYVQKQCSNLPSELPQLLPD-LESHVPWASEALGKM 179 Query: 178 GWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCD 237 + +G VT H D +N + + G K + PP PY ++ P Sbjct: 180 P----DAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSD-RPFIPYELYTPAT 234 Query: 238 RQSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYW 277 Q +D PD R+P++ V G++LY+P W Sbjct: 235 YQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALW 294 Query: 278 WHHIESLLNGGITITVNFWYKGAPTPKRIEYPLK 311 +HH++ I VNFWY +EY LK Sbjct: 295 FHHVQ---QSQGCIAVNFWYD-------MEYDLK 318 >4QU2-A nrPDB Length = 318 Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 111/289 (38%), Gaps = 47/289 (16%) Query: 61 PVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSN 119 P ++ + +PAL KW L YL+ +G+ + SV Y D + F P Sbjct: 53 PCIIRNALQHWPALQKWSLSYLRATVGSTEVSVAVTPDG---YADAVRGDRF--VMPAER 107 Query: 120 REEMKFHEFVEKLQDIQQRGGEERLYLQ-QTLNDTVGRKIVMDFLGFNWNWINKQQGKRG 178 R + ++ L+ Q G LY+Q Q N ++ + + W ++ GK Sbjct: 108 R--LPISHVLDVLEGRAQHPG--VLYVQKQCSNLPTELPQLLSDIESHVPWASESLGKMP 163 Query: 179 WGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDR 238 + +G VT H D +N + + G K +L PP PY ++ P Sbjct: 164 ----DAVNFWLGDASAVTSLHKDHYENLYCVVSGEKHFLLHPPSD-RPFIPYNLYTPATY 218 Query: 239 QSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWW 278 Q +D PD ++P++ V G++LY+P W+ Sbjct: 219 QLTEEGTFRVVDEEAMEKVPWIPLDPLAPDLTQYPSYSQAQALHCTVRAGEMLYLPALWF 278 Query: 279 HHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIMRNIEKMLG 327 HH++ I VNFWY +EY LK + +M + + G Sbjct: 279 HHVQ---QSHGCIAVNFWYD-------MEYDLK-YSYFQLMDTLTRATG 316 >4QSZ-A nrPDB Length = 687 Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 111/289 (38%), Gaps = 47/289 (16%) Query: 61 PVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSN 119 P ++ + +PAL KW L YL+ +G+ + SV Y D + F P Sbjct: 422 PCIIRNALQHWPALQKWSLSYLRATVGSTEVSVAVTPDG---YADAVRGDRF--VMPAER 476 Query: 120 REEMKFHEFVEKLQDIQQRGGEERLYLQ-QTLNDTVGRKIVMDFLGFNWNWINKQQGKRG 178 R + ++ L+ Q G LY+Q Q N ++ + + W ++ GK Sbjct: 477 R--LPISHVLDVLEGRAQHPG--VLYVQKQCSNLPTELPQLLSDIESHVPWASESLGKMP 532 Query: 179 WGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDR 238 + +G VT H D +N + + G K +L PP PY ++ P Sbjct: 533 ----DAVNFWLGDASAVTSLHKDHYENLYCVVSGEKHFLLHPPSD-RPFIPYNLYTPATY 587 Query: 239 QSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWW 278 Q +D PD ++P++ V G++LY+P W+ Sbjct: 588 QLTEEGTFRVVDEEAMEKVPWIPLDPLAPDLTQYPSYSQAQALHCTVRAGEMLYLPALWF 647 Query: 279 HHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIMRNIEKMLG 327 HH++ I VNFWY +EY LK + +M + + G Sbjct: 648 HHVQ---QSHGCIAVNFWYD-------MEYDLK-YSYFQLMDTLTRATG 685 >2RAA-A nrPDB Length = 204 Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 15/110 (13%) Query: 2 AATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEP 61 A A++ + E EAG A+ E P R R+ R +EN + Sbjct: 28 AGQGAKSASQMLAEAALEAGKYVQAFPEYGAERTGAPMRAFNRIGDEYIRVRSAVENPDV 87 Query: 62 VVLTDTNLVYPAL--------------KWDLEYLQENIG-NGDFSVYSAS 96 VV+ D L+ PA+ D E++++ G NG V A+ Sbjct: 88 VVVIDETLLSPAIVEGLSEDGILLVNTVKDFEFVRKKTGFNGKICVVDAT 137 >5JNQ-A nrPDB Length = 376 Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 118 SNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDT 153 ++R+ M HE+V GG E LY Q +++T Sbjct: 3 TSRDHMVLHEYVNAAGITGGSGGSENLYFQSMIHET 38 >5ZA4-A nrPDB Length = 488 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 16/74 (21%) Query: 260 GYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIM 319 YE V+ PGD S+ + + +++WY+G PKR A Sbjct: 375 AYEVVIAPGD------------PSVFGNDLDLLLSWWYRGDVWPKR----RFRWANTAEY 418 Query: 320 RNIEKMLGEALGNP 333 ++K+L EA+ NP Sbjct: 419 HEVQKLLDEAIKNP 432 >3K5S-A nrPDB Length = 217 Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 7/84 (8%) Query: 25 PAWDESQLRSYSF----PTRPIPRLSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEY 80 P+ D + LR Y+ PT+P P + DP +++ PV+L + P K++L Sbjct: 137 PSTDNALLR-YNILKQTPTKPSPNMFYIDPEKGDIVTVVSPVLLDRETMETP--KYELVI 193 Query: 81 LQENIGNGDFSVYSASTHKFLYYD 104 +++G D + +T L D Sbjct: 194 EAKDMGGHDVGLTGTATATILIDD 217 >1R0L-A nrPDB Length = 388 Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust. Identities = 10/15 (66%), Positives = 12/15 (80%) Query: 241 QVDFDNPDYERFPNF 255 Q+DF+ PDYERFP Sbjct: 294 QMDFEAPDYERFPAL 308 >3HOA-A nrPDB Length = 509 Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 16/81 (19%) Query: 261 YETVVGPGDVLYIPMYWWHHIESLLNGGITITVN-----FWYKGAP-----TPKRIEYPL 310 +E +GPGDV Y+ E N GI T++ + +G P TP+ L Sbjct: 247 FEIAIGPGDVRITTRYY----EDFFNAGIFGTLHEMGHALYEQGLPKEHWGTPRGDAVSL 302 Query: 311 KAHQKVAIMRNIEKMLGEALG 331 H+ + R E ++G +LG Sbjct: 303 GVHESQS--RTWENLVGRSLG 321 >5KAQ-A nrPDB Length = 512 Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 22/74 (29%) Query: 222 DQFECLYPYPVHHPCDRQSQ------------VDFDNPDYERFPNFQN----------VV 259 D F+ LY + VHHP Q Q V PN ++ + Sbjct: 172 DNFDKLYIWGVHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIESRPWVRGLSSRIS 231 Query: 260 GYETVVGPGDVLYI 273 Y T+V PGDVL I Sbjct: 232 IYWTIVKPGDVLVI 245 >2MYJ-A nrPDB Length = 79 Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 274 PMYWWH-HIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQK 315 P+ WW H E++ GG T+T+N PK IEY K QK Sbjct: 23 PVAWWMLHEETVYKGGDTVTLNE-TDLTQIPKVIEYCKKNPQK 64 >2XDV-A nrPDB Length = 442 Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 26/103 (25%) Query: 188 LIGMEGNVTPA-------HYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQS 240 L+G +TPA HYD+ + F Q++G K L+ P P R+ Sbjct: 138 LVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTV-----------PLAREY 186 Query: 241 QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIES 283 V+ + ER +E ++ PGD+LY P H ++ Sbjct: 187 SVEAE----ERIGR----PVHEFMLKPGDLLYFPRGTIHQADT 221 >2CXB-A nrPDB Length = 124 Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 14/24 (58%) Query: 12 GSGEPREEAGALGPAWDESQLRSY 35 G GE +EAGA G AWDE Y Sbjct: 56 GYGEGMKEAGAKGLAWDEEHFVQY 79 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4Z1V-A nrPDB 591 e-169 4QSZ-A nrPDB 334 3e-92 4QU2-A nrPDB 326 1e-89 5NFN-A nrPDB 317 4e-87 3AL6-A nrPDB 304 5e-83 Sequences not found previously or not previously below threshold: 2XDV-A nrPDB 37 0.010 4WFO-A nrPDB 36 0.030 4LT5-A nrPDB 34 0.090 4LIV-A nrPDB 33 0.14 1UU1-A nrPDB 33 0.21 4NC6-A nrPDB 32 0.35 2CXB-A nrPDB 31 0.71 3HZJ-A nrPDB 31 1.1 2YEW-C nrPDB 29 2.1 4NHY-A nrPDB 28 5.7 3D0Q-A nrPDB 28 7.7 CONVERGED! >4Z1V-A nrPDB Length = 352 Score = 591 bits (1522), Expect = e-169, Method: Composition-based stats. Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 1 MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEE 60 MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEE Sbjct: 4 MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEE 63 Query: 61 PVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNR 120 PVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNR Sbjct: 64 PVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNR 123 Query: 121 EEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWG 180 EEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWG Sbjct: 124 EEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWG 183 Query: 181 QLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQS 240 QLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQS Sbjct: 184 QLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQS 243 Query: 241 QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 300 QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA Sbjct: 244 QVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 303 Query: 301 PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN 349 PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN Sbjct: 304 PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN 352 >4QSZ-A nrPDB Length = 687 Score = 334 bits (856), Expect = 3e-92, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 112/293 (38%), Gaps = 48/293 (16%) Query: 57 ENEEPVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFK 115 N P ++ + +PAL KW L YL+ +G+ + SV Y D + F Sbjct: 419 PNR-PCIIRNALQHWPALQKWSLSYLRATVGSTEVSVAVTPDG---YADAVRGDRF--VM 472 Query: 116 PRSNREEMKFHEFVEKLQDIQQRGGEERLYLQ-QTLNDTVGRKIVMDFLGFNWNWINKQQ 174 P R + ++ L+ Q G LY+Q Q N ++ + + W ++ Sbjct: 473 PAERR--LPISHVLDVLEGRAQHPG--VLYVQKQCSNLPTELPQLLSDIESHVPWASESL 528 Query: 175 GKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHH 234 GK + +G VT H D +N + + G K +L PP PY ++ Sbjct: 529 GKMP----DAVNFWLGDASAVTSLHKDHYENLYCVVSGEKHFLLHPPSD-RPFIPYNLYT 583 Query: 235 PCDRQSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIP 274 P Q +D PD ++P++ V G++LY+P Sbjct: 584 PATYQLTEEGTFRVVDEEAMEKVPWIPLDPLAPDLTQYPSYSQAQALHCTVRAGEMLYLP 643 Query: 275 MYWWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIMRNIEKMLG 327 W+HH++ I VNFWY +EY LK + +M + + G Sbjct: 644 ALWFHHVQ---QSHGCIAVNFWYD-------MEYDLK-YSYFQLMDTLTRATG 685 >4QU2-A nrPDB Length = 318 Score = 326 bits (834), Expect = 1e-89, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 112/293 (38%), Gaps = 48/293 (16%) Query: 57 ENEEPVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFK 115 N P ++ + +PAL KW L YL+ +G+ + SV Y D + F Sbjct: 50 PNR-PCIIRNALQHWPALQKWSLSYLRATVGSTEVSVAVTPDG---YADAVRGDRF--VM 103 Query: 116 PRSNREEMKFHEFVEKLQDIQQRGGEERLYLQ-QTLNDTVGRKIVMDFLGFNWNWINKQQ 174 P R + ++ L+ Q G LY+Q Q N ++ + + W ++ Sbjct: 104 PAERR--LPISHVLDVLEGRAQHPG--VLYVQKQCSNLPTELPQLLSDIESHVPWASESL 159 Query: 175 GKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHH 234 GK + +G VT H D +N + + G K +L PP PY ++ Sbjct: 160 GKMP----DAVNFWLGDASAVTSLHKDHYENLYCVVSGEKHFLLHPPSD-RPFIPYNLYT 214 Query: 235 PCDRQSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIP 274 P Q +D PD ++P++ V G++LY+P Sbjct: 215 PATYQLTEEGTFRVVDEEAMEKVPWIPLDPLAPDLTQYPSYSQAQALHCTVRAGEMLYLP 274 Query: 275 MYWWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIMRNIEKMLG 327 W+HH++ I VNFWY +EY LK + +M + + G Sbjct: 275 ALWFHHVQ---QSHGCIAVNFWYD-------MEYDLK-YSYFQLMDTLTRATG 316 >5NFN-A nrPDB Length = 335 Score = 317 bits (812), Expect = 4e-87, Method: Composition-based stats. Identities = 76/331 (22%), Positives = 122/331 (36%), Gaps = 60/331 (18%) Query: 30 SQLRSYSFPTR------PIPRLSQSDPRAEELI-----ENEEPVVLTDTNLVYPAL-KWD 77 S+LR + R +P L P N P ++ + +PAL KW Sbjct: 30 SELREFPAAARELCVPLAVPYLD-KPPTPLHFYRDWVCPNR-PCIIRNALQHWPALQKWS 87 Query: 78 LEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQ 137 L Y + +G+ + SV Y D + F P R + F ++ L+ Q Sbjct: 88 LPYFRATVGSTEVSVAVTPDG---YADAVRGDRF--MMPAERRLPLSF--VLDVLEGRAQ 140 Query: 138 RGGEERLYLQ-QTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVT 196 G LY+Q Q N ++ L + W ++ GK + +G VT Sbjct: 141 HPG--VLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMP----DAVNFWLGEAAAVT 194 Query: 197 PAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQ--------------- 241 H D +N + + G K + PP PY ++ P Q Sbjct: 195 SLHKDHYENLYCVVSGEKHFLFHPPSD-RPFIPYELYTPATYQLTEEGTFKVVDEEAMEK 253 Query: 242 -----VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFW 296 +D PD R+P++ V G++LY+P W+HH++ I VNFW Sbjct: 254 VPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQ---QSQGCIAVNFW 310 Query: 297 YKGAPTPKRIEYPLKAHQKVAIMRNIEKMLG 327 Y +EY LK + ++ ++ K G Sbjct: 311 YD-------MEYDLK-YSYFQLLDSLTKASG 333 >3AL6-A nrPDB Length = 338 Score = 304 bits (777), Expect = 5e-83, Method: Composition-based stats. Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 55/318 (17%) Query: 41 PIPRLS--QSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTH 98 P+PRL + + L +P+VL +L KW ++YL + G + ++ A+ Sbjct: 30 PVPRLEGVSREQFMQHLYPQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVA 89 Query: 99 KFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQR----GGEERLYLQQTLNDTV 154 + + +NF R+ + F + V++ + + + +E+ YL+ D Sbjct: 90 QMDFIS-------KNFVYRT----LPFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDP- 137 Query: 155 GRKIVMDFLGFNWNWINKQ----QGKRGW------GQLTSNLLLIGMEGNVTPAHYDEQQ 204 RK V D I KQ +G + Q S++ I G HYD Sbjct: 138 -RKDVAD--------IRKQFPLLKGDIKFPEFFKEEQFFSSVFRISSPGLQLWTHYDVMD 188 Query: 205 NFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETV 264 N Q+ G KR +LF P + LY + ++ DNPD ++P F YE Sbjct: 189 NLLIQVTGKKRVVLFSPRDAQYLY-----LKGTKSEVLNIDNPDLAKYPLFSKARRYECS 243 Query: 265 VGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGAPTP---KRIEY----PLKAHQKVA 317 + GDVL+IP W+H++ S G + VN ++K P+ K Y P A + Sbjct: 244 LEAGDVLFIPALWFHNVISEEFG---VGVNIFWKHLPSECYDKTDTYGNKDPTAASRAAQ 300 Query: 318 IMRNIEKMLGEALGNPQE 335 I+ K L E P+E Sbjct: 301 ILDRALKTLAEL---PEE 315 >2XDV-A nrPDB Length = 442 Score = 37.1 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 20/107 (18%) Query: 169 WINKQQGKRGWGQLTSNLLLIGMEGNV-TPAHYDEQQNFFAQIKGYKRCILFPPDQFECL 227 W +++ + +G L + + I G+ P HYD+ + F Q++G K L+ P Sbjct: 125 WRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPT----- 179 Query: 228 YPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIP 274 P+ +++ P +E ++ PGD+LY P Sbjct: 180 --VPLAREYSVEAEERIGRP------------VHEFMLKPGDLLYFP 212 >4WFO-A nrPDB Length = 858 Score = 35.6 bits (80), Expect = 0.030, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 9/123 (7%) Query: 37 FPTRPIPRLSQS-----DPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFS 91 FP + ++SQS + A E+I P V+ P D G+ Sbjct: 346 FPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLD----PAIYGDQSSK 401 Query: 92 VYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLN 151 + + S Y ++ + + + F + M + + +L + L+L++ Sbjct: 402 ITADSLDLDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGT 461 Query: 152 DTV 154 Sbjct: 462 LKP 464 >4LT5-A nrPDB Length = 327 Score = 34.0 bits (76), Expect = 0.090, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 11/101 (10%) Query: 218 LFPPDQFECLYPYPVHHPCDR--QSQVDFDNPDYERFPNFQNVVGY--------ETVVGP 267 L+P F L P H + + +D F NFQN GY + V P Sbjct: 213 LYPSTAFNSLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDKNCKVFVQP 272 Query: 268 GDVLYIPMYWWHHIESLLNGGITIT-VNFWYKGAPTPKRIE 307 GDVL+ + H+ + + G I V F +KG+ T E Sbjct: 273 GDVLFFKGNEYKHVVANITSGWRIGLVYFAHKGSKTKPYYE 313 >4LIV-A nrPDB Length = 407 Score = 33.3 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 18/112 (16%) Query: 176 KRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHP 235 + ++ ++ + G H D+ F Q G +R + Q + P+ Sbjct: 136 ELPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPH----- 190 Query: 236 CDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNG 287 PD + F+ ++ E + PGD+LYIP + H +L N Sbjct: 191 -----------PDLLQVDPFEAIIDEE--LEPGDILYIPPGFPHEGYALENA 229 >1UU1-A nrPDB Length = 335 Score = 32.9 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 24/142 (16%) Query: 204 QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYET 263 + + + + R + FPP Y + ++ P +++ E Sbjct: 87 EIIYVMMLMFDRSVFFPPT----YSCYRIFAKAVGAKFLEV--------PLTKDLRIPEV 134 Query: 264 VVGPGDVLYIP--------MYWWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQK 315 VG GDV++IP ++ IE +L G + ++ Y +++ LK ++ Sbjct: 135 NVGEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDF-LKKYEN 193 Query: 316 VAIMRNIEKMLGEALGNPQEVG 337 +A++R K A Q VG Sbjct: 194 LAVIRTFSKAFSLA---AQRVG 212 >4NC6-A nrPDB Length = 314 Score = 32.1 bits (71), Expect = 0.35, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 7/97 (7%) Query: 55 LIENEEP---VVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANF 111 LI E P + D N +PA +Y ++ G+G S+Y +Y +E Sbjct: 60 LITKESPQDSAITRDINRTFPAH----DYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQG 115 Query: 112 QNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQ 148 Q+F M + L I G L+ Q Sbjct: 116 QSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRELFKQN 152 >2CXB-A nrPDB Length = 124 Score = 31.3 bits (69), Expect = 0.71, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 16/31 (51%) Query: 5 AAEAVASGSGEPREEAGALGPAWDESQLRSY 35 +A G GE +EAGA G AWDE Y Sbjct: 49 GTQADFKGYGEGMKEAGAKGLAWDEEHFVQY 79 >3HZJ-A nrPDB Length = 310 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 4/87 (4%) Query: 59 EEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRS 118 +E V+ D + +PA +Y ++ G+G S+Y +Y ++ Q+F Sbjct: 69 QESVITRDIHRTFPAH----DYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAV 124 Query: 119 NREEMKFHEFVEKLQDIQQRGGEERLY 145 M + L I G LY Sbjct: 125 LLLHMPEEQAFCVLVKIMYDYGLRDLY 151 >2YEW-C nrPDB Length = 421 Score = 29.4 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 60/191 (31%), Gaps = 23/191 (12%) Query: 62 VVLTDTNLVYPALKWDLE-----YLQENIGNGDF-----SVYSASTHKFLYYDEKKMANF 111 + L + + + + ++ Y + + + ++ +A Sbjct: 213 ITLFNCDTAPKCITYAVDNTVWQYNSQYVPRSEVTEVKGKIHV-PFPLTDSTCAVSVAPE 271 Query: 112 QNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWIN 171 R E FH L I+ G + + Q+ ++ + + I + G + W N Sbjct: 272 PQVTYRLGEVEFHFHPMYPTLFSIRSLGKDPS-HSQEWIDTPMSKTIQVGAEGVEYVWGN 330 Query: 172 KQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQ----------NFFAQIKGYKRCILFPP 221 + W Q +S+ G ++ +YD I C L Sbjct: 331 NNPVRL-WAQKSSSSSAHGNPISIVSHYYDLYPYWTITVLASLGLLIVISSGFSCFLCSV 389 Query: 222 DQFECLYPYPV 232 + +CL PY + Sbjct: 390 ARTKCLTPYQL 400 >4NHY-A nrPDB Length = 562 Score = 28.3 bits (61), Expect = 5.7, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 15/30 (50%) Query: 220 PPDQFECLYPYPVHHPCDRQSQVDFDNPDY 249 PP+ FE P H P D + D+ NP Y Sbjct: 265 PPNYFEPPIPRSPHIPQDHEILYDWINPTY 294 >3D0Q-A nrPDB Length = 398 Score = 27.9 bits (60), Expect = 7.7, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%) Query: 42 IPRLSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYS 94 IP+L DPR + E V LV + K D + L+ IG+ + Sbjct: 320 IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAA 372 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.120 0.322 Lambda K H 0.267 0.0369 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,706,940 Number of Sequences: 36641 Number of extensions: 501283 Number of successful extensions: 1429 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1371 Number of HSP's gapped (non-prelim): 39 length of query: 349 length of database: 10,336,785 effective HSP length: 98 effective length of query: 251 effective length of database: 6,745,967 effective search space: 1693237717 effective search space used: 1693237717 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 59 (27.5 bits)