BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9NSY2
         (213 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2R55-A nrPDB                                                          439   e-124
2MOU-A nrPDB                                                          145   1e-35
5BRL-A nrPDB                                                          134   2e-32
3P0L-A nrPDB                                                           75   2e-14
5I9J-A nrPDB                                                           66   1e-11
4N4N-A nrPDB                                                           30   0.51 
3IBV-A nrPDB                                                           30   1.0  
2R0L-A nrPDB                                                           29   1.3  
1YC0-A nrPDB                                                           29   1.4  
4G09-A nrPDB                                                           28   3.1  
4LDU-A nrPDB                                                           28   3.8  
1DGJ-A nrPDB                                                           27   5.2  

>2R55-A nrPDB
          Length = 231

 Score =  439 bits (1129), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/210 (99%), Positives = 210/210 (100%)

Query: 4   ALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEE 63
           ++AAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEE
Sbjct: 22  SMAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEE 81

Query: 64  VWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVK 123
           VWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVK
Sbjct: 82  VWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVK 141

Query: 124 RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY 183
           RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY
Sbjct: 142 RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY 201

Query: 184 LPQNVVDSFFPRSMTRFYANLQKAVKQFHE 213
           LPQNVVDSFFPRSMTRFYANLQKAVKQFHE
Sbjct: 202 LPQNVVDSFFPRSMTRFYANLQKAVKQFHE 231


>2MOU-A nrPDB
          Length = 220

 Score =  145 bits (366), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 2/201 (0%)

Query: 9   MSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWDCV 68
           +++  A+++L Y RDT+GWK+ +    ++VS + S +F GNLYR EGI+  +  ++ D +
Sbjct: 6   IAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAKLSDFL 65

Query: 69  KPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDG 128
                G R+ WD+++  + ++  I     +  T T S A+  ISPRDF+DLV +KRYE  
Sbjct: 66  YQT--GDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRYEGN 123

Query: 129 TISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNV 188
               ++  V+ P  PP   ++RG+NHPCG  C P+   P  + LV F  T++ G L  ++
Sbjct: 124 MNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLSPSI 183

Query: 189 VDSFFPRSMTRFYANLQKAVK 209
           ++   P ++  F  N +  +K
Sbjct: 184 IEKTMPSNLVNFILNAKDGIK 204


>5BRL-A nrPDB
          Length = 210

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 112/205 (54%), Gaps = 6/205 (2%)

Query: 6   AAQMSEAVAEKMLQYRR-DTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEV 64
            A +S  +   ++QY       W++ ++   V+V  +PS EF G LY+ +G++   +  V
Sbjct: 11  VASISTKLQNTLIQYHSIKEDEWRVAKKVKDVTVWRKPSEEFNGYLYKAQGVMDDVVNNV 70

Query: 65  WDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKR 124
            D ++P  G  R+ WD  +T  ++++   +  CV R +T      +ISPR+FVD      
Sbjct: 71  IDHIRP--GPWRLDWDRLMTSLDVLEHFEENCCVMRYTTAGQLDNIISPREFVDFSYTVG 128

Query: 125 YEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYL 184
           YE+G +S     V       +P FVRG+NHPCG FC PL   P+++ L  +  TDL G +
Sbjct: 129 YEEGLLSCG---VSVEWSETRPEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMI 185

Query: 185 PQNVVDSFFPRSMTRFYANLQKAVK 209
           PQ+ VD+    ++  FY++L+K ++
Sbjct: 186 PQSAVDTAMASTLANFYSDLRKGLR 210


>3P0L-A nrPDB
          Length = 221

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 8/205 (3%)

Query: 8   QMSEAVAEKMLQYRRDTAGWKI-CREGNGVSVSWR--PSVEFPGNLYRGEGIVYGTLEEV 64
           Q  E   +K L    +  GWK   ++ NG  V  +  P V   G ++R E +V   +E +
Sbjct: 14  QQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDV---GKVFRLEVVVDQPMERL 70

Query: 65  WDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKR 124
           ++ +   +  +  +W+ NV   +++Q I     ++      AA  L+ PRDFV +   KR
Sbjct: 71  YEELVERMEAMG-EWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKR 129

Query: 125 YEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYL 184
                + +     +    P + G +R  + P      PL G P+KT L      DL G+L
Sbjct: 130 RGSTCVLAGMA-TDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWL 188

Query: 185 PQNVVDSFFPRSMTRFYANLQKAVK 209
           P+++++    ++   F  +L+K ++
Sbjct: 189 PKSIINQVLSQTQVDFANHLRKRLE 213


>5I9J-A nrPDB
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 1/135 (0%)

Query: 77  VKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATH 136
           V W++ VT  +I+Q + D   +S   +  AA  ++SPRDFV++  ++R  D  +SS    
Sbjct: 93  VLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIA- 151

Query: 137 VEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPRS 196
             H   PP   +VRG N P G         P     V   +TDL G LP+ ++      +
Sbjct: 152 TSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAAT 211

Query: 197 MTRFYANLQKAVKQF 211
           M  F  +L++ + + 
Sbjct: 212 MFEFAFHLRQRISEL 226


>4N4N-A nrPDB
          Length = 546

 Score = 30.4 bits (67), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 117 VDLVLVKRYEDGTISSNATHVEHPLCPPKPGF 148
            + ++ K YEDGT++   T+  +P  P KPGF
Sbjct: 390 ANAIVHKMYEDGTLTGQKTNRPNPPEPEKPGF 421


>3IBV-A nrPDB
          Length = 980

 Score = 29.6 bits (65), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 1  MDPALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEF 46
          +DP++   + +   + +   R  + GWKIC E       ++PS   
Sbjct: 16 LDPSVGPIIKQQATDFIGSLRSSSTGWKICHEIFSEKTKYKPSTRL 61


>2R0L-A nrPDB
          Length = 248

 Score = 29.3 bits (64), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 86  FEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPK 145
           F     +T T  + +   P     + +P D  DLVL++  + G   +  +    P+C P+
Sbjct: 60  FNRTTDVTQTFGIEKY-IPYTLYSVFNPSDH-DLVLIRLKKKGDRCATRSQFVQPICLPE 117

Query: 146 PGFVRGFNHPC 156
           PG      H C
Sbjct: 118 PGSTFPAGHKC 128


>1YC0-A nrPDB
          Length = 283

 Score = 29.3 bits (64), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 86  FEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPK 145
           F     +T T  + +   P     + +P D  DLVL++  + G   +  +    P+C P+
Sbjct: 95  FNRTTDVTQTFGIEKY-IPYTLYSVFNPSDH-DLVLIRLKKKGDRCATRSQFVQPICLPE 152

Query: 146 PGFVRGFNHPC 156
           PG      H C
Sbjct: 153 PGSTFPAGHKC 163


>4G09-A nrPDB
          Length = 438

 Score = 28.1 bits (61), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)

Query: 97  CVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEH 139
            ++RT T SA     S RDF  ++LVK +ED    +N    EH
Sbjct: 291 TLARTETASA-----SWRDFGAVILVKDFEDAIPLANRIAAEH 328


>4LDU-A nrPDB
          Length = 397

 Score = 27.7 bits (60), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 9/66 (13%)

Query: 130 ISSNATHVEHPLCP-PKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNV 188
           +S    H E  + P P  G +RG  HP   FC+ L    T T      H   S  +P+  
Sbjct: 128 MSLQPVHSERDVFPVPDFGMLRGSKHPTEFFCKTLTASDTST------HGGFS--VPRRA 179

Query: 189 VDSFFP 194
            +  FP
Sbjct: 180 AEKLFP 185


>1DGJ-A nrPDB
          Length = 907

 Score = 27.3 bits (59), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 115 DFVDLVLVKR-YEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTK 169
           D +++V V+   +DG   ++    E PL  P    + G  + CG     LP  P K
Sbjct: 846 DDIEIVYVETPRKDGPFGASGVG-EMPLTAPHAAIINGIYNACGARVRHLPARPEK 900


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2R55-A nrPDB                                                          343   4e-95
2MOU-A nrPDB                                                          283   5e-77
5BRL-A nrPDB                                                          277   3e-75
3P0L-A nrPDB                                                          250   4e-67
5I9J-A nrPDB                                                          194   3e-50

Sequences not found previously or not previously below threshold:

6FXC-AH nrPDB                                                          32   0.17 
3IBV-A nrPDB                                                           32   0.18 
1IAO-B nrPDB                                                           29   1.8  
3TSM-A nrPDB                                                           29   2.4  
3D4J-A nrPDB                                                           28   2.5  
3ZM8-A nrPDB                                                           28   2.5  
5LTM-B nrPDB                                                           28   3.2  
4KQV-A nrPDB                                                           28   3.3  


CONVERGED!
>2R55-A nrPDB
          Length = 231

 Score =  343 bits (879), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 208/210 (99%), Positives = 210/210 (100%)

Query: 4   ALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEE 63
           ++AAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEE
Sbjct: 22  SMAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEE 81

Query: 64  VWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVK 123
           VWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVK
Sbjct: 82  VWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVK 141

Query: 124 RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY 183
           RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY
Sbjct: 142 RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY 201

Query: 184 LPQNVVDSFFPRSMTRFYANLQKAVKQFHE 213
           LPQNVVDSFFPRSMTRFYANLQKAVKQFHE
Sbjct: 202 LPQNVVDSFFPRSMTRFYANLQKAVKQFHE 231


>2MOU-A nrPDB
          Length = 220

 Score =  283 bits (723), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 2/201 (0%)

Query: 9   MSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWDCV 68
           +++  A+++L Y RDT+GWK+ +    ++VS + S +F GNLYR EGI+  +  ++ D +
Sbjct: 6   IAQQTAQEVLGYNRDTSGWKVVKTSKKITVSSKASRKFHGNLYRVEGIIPESPAKLSDFL 65

Query: 69  KPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDG 128
                G R+ WD+++  + ++  I     +  T T S A+  ISPRDF+DLV +KRYE  
Sbjct: 66  YQT--GDRITWDKSLQVYNMVHRIDSDTFICHTITQSFAVGSISPRDFIDLVYIKRYEGN 123

Query: 129 TISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNV 188
               ++  V+ P  PP   ++RG+NHPCG  C P+   P  + LV F  T++ G L  ++
Sbjct: 124 MNIISSKSVDFPEYPPSSNYIRGYNHPCGFVCSPMEENPAYSKLVMFVQTEMRGKLSPSI 183

Query: 189 VDSFFPRSMTRFYANLQKAVK 209
           ++   P ++  F  N +  +K
Sbjct: 184 IEKTMPSNLVNFILNAKDGIK 204


>5BRL-A nrPDB
          Length = 210

 Score =  277 bits (708), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 112/205 (54%), Gaps = 6/205 (2%)

Query: 6   AAQMSEAVAEKMLQYRR-DTAGWKICREGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEV 64
            A +S  +   ++QY       W++ ++   V+V  +PS EF G LY+ +G++   +  V
Sbjct: 11  VASISTKLQNTLIQYHSIKEDEWRVAKKVKDVTVWRKPSEEFNGYLYKAQGVMDDVVNNV 70

Query: 65  WDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKR 124
            D ++P  G  R+ WD  +T  ++++   +  CV R +T      +ISPR+FVD      
Sbjct: 71  IDHIRP--GPWRLDWDRLMTSLDVLEHFEENCCVMRYTTAGQLDNIISPREFVDFSYTVG 128

Query: 125 YEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYL 184
           YE+G +S     V       +P FVRG+NHPCG FC PL   P+++ L  +  TDL G +
Sbjct: 129 YEEGLLSCG---VSVEWSETRPEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMI 185

Query: 185 PQNVVDSFFPRSMTRFYANLQKAVK 209
           PQ+ VD+    ++  FY++L+K ++
Sbjct: 186 PQSAVDTAMASTLANFYSDLRKGLR 210


>3P0L-A nrPDB
          Length = 221

 Score =  250 bits (638), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 94/205 (45%), Gaps = 8/205 (3%)

Query: 8   QMSEAVAEKMLQYRRDTAGWKI-CREGNGVSVSWR--PSVEFPGNLYRGEGIVYGTLEEV 64
           Q  E   +K L    +  GWK   ++ NG  V  +  P V   G ++R E +V   +E +
Sbjct: 14  QQGEEAMQKALGILSNQEGWKKESQQDNGDKVMSKVVPDV---GKVFRLEVVVDQPMERL 70

Query: 65  WDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKR 124
           ++ +   +  +  +W+ NV   +++Q I     ++      AA  L+ PRDFV +   KR
Sbjct: 71  YEELVERMEAMG-EWNPNVKEIKVLQKIGKDTFITHELAAEAAGNLVGPRDFVSVRCAKR 129

Query: 125 YEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYL 184
                + +     +    P + G +R  + P      PL G P+KT L      DL G+L
Sbjct: 130 RGSTCVLAGMA-TDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGWL 188

Query: 185 PQNVVDSFFPRSMTRFYANLQKAVK 209
           P+++++    ++   F  +L+K ++
Sbjct: 189 PKSIINQVLSQTQVDFANHLRKRLE 213


>5I9J-A nrPDB
          Length = 229

 Score =  194 bits (492), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 4/205 (1%)

Query: 8   QMSEAVAEKMLQYRRDTAGWKICREGN-GVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWD 66
           +  +     + Q       WK  +    G +V     V F G  +  +  +    E V+ 
Sbjct: 25  RQGKEATAVVDQILAQEENWKFEKNNEYGDTVYT-IEVPFHGKTFILKTFLPCPAELVYQ 83

Query: 67  CVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYE 126
            V      + V W++ VT  +I+Q + D   +S   +  AA  ++SPRDFV++  ++R  
Sbjct: 84  EVILQPERM-VLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRR 142

Query: 127 DGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQ 186
           D  +SS      H   PP   +VRG N P G         P     V   +TDL G LP+
Sbjct: 143 DRYLSSGIA-TSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPR 201

Query: 187 NVVDSFFPRSMTRFYANLQKAVKQF 211
            ++      +M  F  +L++ + + 
Sbjct: 202 YLIHQSLAATMFEFAFHLRQRISEL 226


>6FXC-AH nrPDB
          Length = 145

 Score = 32.4 bits (72), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 126 EDGTISSNATHVEH-PLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYL 184
            D  I  NA+ +E          + R  NHP G       GE  +TN        + G L
Sbjct: 52  GDYVIVINASKIEFTGNKETDKVYYRHSNHPGG-IKSITAGELRRTNPERLIENSIKGML 110

Query: 185 PQN 187
           P  
Sbjct: 111 PST 113


>3IBV-A nrPDB
          Length = 980

 Score = 32.0 bits (71), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%)

Query: 1  MDPALAAQMSEAVAEKMLQYRRDTAGWKICREGNGVSVSWRPSVEF 46
          +DP++   + +   + +   R  + GWKIC E       ++PS   
Sbjct: 16 LDPSVGPIIKQQATDFIGSLRSSSTGWKICHEIFSEKTKYKPSTRL 61


>1IAO-B nrPDB
          Length = 222

 Score = 28.9 bits (63), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 39/132 (29%), Gaps = 7/132 (5%)

Query: 44  VEFPGNLYRGEGIVYGTLEEVWDCVKPAVGGLRVKWDENVTGFEIIQSITDTLCVSRTST 103
           V+F G  Y   G     +  V   +      +R  +D +V  +  +  +         S 
Sbjct: 34  VQFKGECYYTNGT--QRIRLVTRYIYNREEYVR--YDSDVGEYRAVTELGRPDAEYWNSQ 89

Query: 104 PSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPL 163
           P    +    R  VD      YE    S++   +E P            NH     C   
Sbjct: 90  PEILDRT---RAEVDTACRHNYEGPETSTSLRRLEQPNVAISLSRTEALNHHNTLVCSVT 146

Query: 164 PGEPTKTNLVTF 175
              P K  +  F
Sbjct: 147 DFYPAKIKVRWF 158


>3TSM-A nrPDB
          Length = 272

 Score = 28.5 bits (62), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 83  VTGFEIIQSITDTLCVSRTSTPSAAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLC 142
           +   E  ++      ++     S +  LI P DF    L K YE+G  +  +   + P  
Sbjct: 47  LKALEAKRAAGQFALIAEIKKASPSKGLIRP-DFDPPALAKAYEEGGAACLSVLTDTPSF 105

Query: 143 PPKPGFVRGFNHPC 156
              P F+      C
Sbjct: 106 QGAPEFLTAARQAC 119


>3D4J-A nrPDB
          Length = 400

 Score = 28.2 bits (61), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 31  REGNGVSVSWRPSVEFPGNL-YRGEGIVYGTLEEVWDCVKPAVGG 74
           ++  G +V  R SVE    L +R E +V   + E+  C++     
Sbjct: 206 KKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFP 250


>3ZM8-A nrPDB
          Length = 475

 Score = 28.2 bits (61), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 32  EGNGVSVSWRPSVEFPGNLYRGEGIVYGTLEEVWDCVKPAV----GGLRVKW 79
           E  GV V WRP  E  G  +          +++WD +   +    G   + W
Sbjct: 290 EAAGVPVLWRPLHEAEGGWFWWGAKGPEPAKQLWDILYERLTVHHGLDNLIW 341


>5LTM-B nrPDB
          Length = 539

 Score = 27.8 bits (60), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 3/75 (4%)

Query: 131 SSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVD 190
           S +  +       P  G   GF                +TNLV F  T     LP   V 
Sbjct: 39  SCDYINNAVESGEPIFGVTSGFGGMANVAISREQASELQTNLVWFLKTGAGNKLPLADVR 98

Query: 191 SFFPRSMTRFYANLQ 205
           +     + R  ++++
Sbjct: 99  AAM---LLRANSHMR 110


>4KQV-A nrPDB
          Length = 390

 Score = 27.8 bits (60), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 12/40 (30%)

Query: 156 CGCFCEPLPGEPTKTNLVTFFHTDLSGYLPQNVVDSFFPR 195
           C         E  K  L   F T L GYL   +     P 
Sbjct: 194 CKALTIKYSNEIKKEKLTWHFETGLKGYLDHKLEAETLPA 233


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.308    0.129    0.334 

Lambda     K      H
   0.267   0.0396    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,407,209
Number of Sequences: 36641
Number of extensions: 273462
Number of successful extensions: 700
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 667
Number of HSP's gapped (non-prelim): 27
length of query: 213
length of database: 10,336,785
effective HSP length: 93
effective length of query: 120
effective length of database: 6,929,172
effective search space: 831500640
effective search space used: 831500640
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 57 (26.6 bits)