BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9NSD9 (589 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3L4G-B nrPDB 1209 0.0 2CXI-A nrPDB 170 2e-42 4P71-A nrPDB 82 5e-16 2RHQ-B nrPDB 76 5e-14 3PCO-B nrPDB 70 3e-12 1PYS-B nrPDB 70 3e-12 5HTF-A nrPDB 35 0.087 2PV7-A nrPDB 31 1.9 2DU7-A nrPDB 30 2.3 2BK2-A nrPDB 30 2.5 1POI-B nrPDB 30 2.7 5C8B-B nrPDB 29 6.6 >3L4G-B nrPDB Length = 589 Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/589 (99%), Positives = 589/589 (100%) Query: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60 Query: 61 VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF 120 VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF Sbjct: 61 VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF 120 Query: 121 AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD 180 AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD Sbjct: 121 AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD 180 Query: 181 IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGD 240 IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGD Sbjct: 181 IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGD 240 Query: 241 HSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFP 300 HSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFP Sbjct: 241 HSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFP 300 Query: 301 ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH 360 ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH Sbjct: 301 ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH 360 Query: 361 ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ 420 ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ Sbjct: 361 ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ 420 Query: 421 EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI 480 EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI Sbjct: 421 EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI 480 Query: 481 VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG 540 VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG Sbjct: 481 VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG 540 Query: 541 PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINVGPFL 589 PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEIN+GPFL Sbjct: 541 PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL 589 >2CXI-A nrPDB Length = 348 Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 119/380 (31%), Positives = 198/380 (52%), Gaps = 38/380 (10%) Query: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60 MP V + L + +GR+++ EE+++L ELD++ E N K Sbjct: 1 MPKFDVSKSDLERLIGRSFSIEEWEDLVLYAKCELDDVWEE---------NGK------- 44 Query: 61 VLYKIDVP-ANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIIT----EETA 115 V +K+D NR DL EG+ R ++ A ++ +P +++K +T E+ Sbjct: 45 VYFKLDSKDTNRPDLWSAEGVARQIKW------ALGIEKGLPKYEVKKSNVTVYVDEKLK 98 Query: 116 KIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTA 175 IRP+ V A++ ++ +D I+LQEK+ R+R VAIG D D + P Y A Sbjct: 99 DIRPYGVYAIVEGLRLDEDSLSQMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPIYYKA 158 Query: 176 KRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPP 235 ++ KF PL +E T E++ ++ + Y H+I++K YP++ DS G VLSMPP Sbjct: 159 AEKTE-KFAPLGYKEEMTLEEILEKHEKG---REYGHLIKDKQFYPLLIDSEGNVLSMPP 214 Query: 236 IINGDHS-RITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNG 294 IIN + + R+T +T+N+FI+ TG K + L+++VT + E + + VV+ + Sbjct: 215 IINSEFTGRVTTDTKNVFIDVTGWKLEKVMLALNVMVTALA---ERGGKIRSVRVVYKDF 271 Query: 295 KSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPT 354 + T P+L ++ V D I K G+ + +LL +M + E+ + +++ P Sbjct: 272 EIET-PDLTPKEFEVELDYIRKLSGLELNDGEIKELLEKMMYEVEI--SRGRAKLKYPAF 328 Query: 355 RADIIHACDIVEDAAIAYGY 374 R DI+HA DI+ED IAYGY Sbjct: 329 RDDIMHARDILEDVLIAYGY 348 >4P71-A nrPDB Length = 792 Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 92/390 (23%), Positives = 164/390 (42%), Gaps = 55/390 (14%) Query: 231 LSMPPIINGDHSRITVNTRNIFIECT--------------------------GTDFTKAK 264 L++ ++ G+HS ++ +TR++F+E G D A+ Sbjct: 310 LAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTDSSHRFERGVDSQLAR 369 Query: 265 IVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETP 324 ++ + + E +V ++H P++A +RA+ + + +G+ Sbjct: 370 KAMERATRLILDIVGG----EPGPIVEQVSEAH-LPKVA--PITLRAERVTQMLGMPLDA 422 Query: 325 ENLAKLLTRMYLKSEVIGDG-NQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLPK 383 + +LL + L V+ DG Q + +P R DI D++E+ A YGYN + + P+ Sbjct: 423 AEIVRLLQALELT--VVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQ 480 Query: 384 TYTIANQFP-LNKLTELLRHDMAAAGFTEALTFALCSQE--DIADKLGVDISATKAVHIS 440 N P LLR + A G+ EA+TF+ ++ D T+ + ++ Sbjct: 481 ARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFD------PGTQPLTLA 534 Query: 441 NPKTAEFQVARTTLLPGLLKTIAAN-RKMPLPLKLFEISDIVI------KDSNTDVGAKN 493 NP +A+ R++L PGL+K + N + ++LFE + K GA Sbjct: 535 NPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQLEGLKQEAMLAGAIC 594 Query: 494 YRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFA 553 + L + N G + D ++ + G G + E PA PG+ A I Sbjct: 595 GKRLPEGWANGRDGVDFFDAKAD--VEAVLASAGA-LGDFSFVPGEHPALHPGQTARIER 651 Query: 554 RGQSVGKLGVLHPDVITKFELTMPCSSLEI 583 G+ VG LG LHP++ K +L P E+ Sbjct: 652 EGRLVGYLGALHPELAKKLDLEQPVFLFEL 681 >2RHQ-B nrPDB Length = 795 Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 25/279 (8%) Query: 309 VRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDA 368 + A+ +NK +G + + + + ++ ++ + G+ + + +P R DI D++E+ Sbjct: 411 ITAEKVNKTIGFNLSNDEIQSIFRQLGFETTLKGE--TLTVNVPSRRKDITIKEDLIEEV 468 Query: 369 AIAYGYNNIQMTLP--KTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADK 426 A YGY+ I +LP T T L+ + AG +A+T++L S++ D Sbjct: 469 ARIYGYDEIPSSLPVFGEVTSGELTDRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKD- 527 Query: 427 LGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAAN-RKMPLPLKLFEISDIVIKDS 485 + + + P + R +LLP L++ A N + ++L+EI + + Sbjct: 528 --FALQERPTISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRLYEIGRVFFGNG 585 Query: 486 NTDV--------GAKNYRHLCAVYYNKNP--GFEIIHGLLDRIMQLLDVPPGEDKGGYVI 535 ++ G ++ + K F I G++DR+ + L++ + Sbjct: 586 EGELPDEVEYLSGILTGEYVVNAWQGKKEEIDFFIAKGVVDRVAEKLNLE-------FSY 638 Query: 536 KASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFEL 574 KA + PGR A + GQ +G +G LHP V +L Sbjct: 639 KAGKIEGLHPGRTAIVSLEGQDIGFIGELHPQVAADNDL 677 >3PCO-B nrPDB Length = 795 Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 89/400 (22%), Positives = 159/400 (39%), Gaps = 74/400 (18%) Query: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 VI D N L+M I G+HS + T+N+ +EC Sbjct: 303 VIADHNKA-LAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRYE 361 Query: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 G D ++ + + C EA V+ ++ T P+ A +R ++ Sbjct: 362 RGVDPALQHKAMERATRLLIDICGG----EAGPVIDITNEA-TLPKRA--TITLRRSKLD 414 Query: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 + +G E + +L R L EV ++ + P R D+ D+VE+ A YGYN Sbjct: 415 RLIGHHIADEQVTDILRR--LGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYN 472 Query: 376 NI-----QMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVD 430 NI Q +L L ++ LL G+ E +T++ VD Sbjct: 473 NIPDEPVQASLIMGTHREADLSLKRVKTLLND----KGYQEVITYSF-----------VD 517 Query: 431 ISATKAVH-------ISNPKTAEFQVARTTLLPGLLKTIAANR-KMPLPLKLFEISDIVI 482 + +H + +P + E R +L GLL T+ N+ + +++FE + Sbjct: 518 PKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFV 577 Query: 483 KDSNTDVGAKNYRHLCAV--------YYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYV 534 D+ +G + L V ++N + L + +LD+ ++ + Sbjct: 578 PDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEF- 636 Query: 535 IKASEGPAFFPGRCAEIFARGQSVGKLGVLHPDVITKFEL 574 +A PA PG+ A I+ +G+ +G +GV+HP++ K +L Sbjct: 637 -RAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDL 675 Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 333 RMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQ-MTLPKTYTIANQF 391 R YLK D N IEI + P RAD + + D A+ +Q +P TI + Sbjct: 148 REYLKL----DDNTIEISVTPNRADCLGIIGVARDVAVLNQLPLVQPEIVPVGATIDDTL 203 Query: 392 PL 393 P+ Sbjct: 204 PI 205 >1PYS-B nrPDB Length = 785 Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 113/281 (40%), Gaps = 32/281 (11%) Query: 324 PENLAKLLTRMYLKSEVI-----------GDGNQIEIEIPPTRADIIHACDIVEDAAIAY 372 PE +LL Y ++E I G+G + P R D+ D+VE+ A Sbjct: 408 PEYANRLLGTSYPEAEQIAILKRLGCRVEGEGPTYRVTPPSHRLDLRLEEDLVEEVARIQ 467 Query: 373 GYNNIQMTLPKTYTIAN----QFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLG 428 GY I + LP + + + P K + LR ++ GF E T++ ED Sbjct: 468 GYETIPLALPAFFPAPDNRGVEAPYRK-EQRLREVLSGLGFQEVYTYSFMDPEDARRFRL 526 Query: 429 VDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLK--LFEISDIVIKDSN 486 ++ K A RT L PGL++ + N + P + LFE+ + + Sbjct: 527 DPPRLLLLNPLAPEKAA----LRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFREREE 582 Query: 487 TDVGAKNYRHLCAVYYNKN--PGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFF 544 T + + + + K G+ ++ G L+ + L + + ++A P Sbjct: 583 THLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFARLGL-------AFRVEAQAFPFLH 635 Query: 545 PGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINV 585 PG + G+ VG LG LHP++ + EL P E+ + Sbjct: 636 PGVSGRVLVEGEEVGFLGALHPEIAQELELP-PVHLFELRL 675 >5HTF-A nrPDB Length = 283 Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 9/120 (7%) Query: 5 SVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEI------ISKEQGNVKAAGAS 58 SV +D L++A+ TY +E +L F+ LE +EKE+ ++ G+ + S Sbjct: 15 SVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLS 74 Query: 59 DVVLYKIDVPAN-RYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEE-TAK 116 L K N Y+LL + + V + ++KA YK PD ++ +++ +E TAK Sbjct: 75 SNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKA-YYKTWEPDITVRHILVDDEATAK 133 >2PV7-A nrPDB Length = 298 Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 18/148 (12%) Query: 185 PLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRI 244 P+N T E E + Y T+N L L ++ +PL ++ G VL + P+ D I Sbjct: 74 PINLTLE--TIERLKPYLTENMLLADLTSVKREPLAKMLEVHTGAVLGLHPMFGAD---I 128 Query: 245 TVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAY 304 + + + C G + + +L+ Q + A++ N H + Y Sbjct: 129 ASMAKQVVVRCDGRFPERYEWLLE------------QIQIWGAKIYQTNATEHDH-NMTY 175 Query: 305 RKEMVRADLINKKVGIRETPENLAKLLT 332 + + + + + P NLA LL Sbjct: 176 IQALRHFSTFANGLHLSKQPINLANLLA 203 >2DU7-A nrPDB Length = 549 Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/205 (20%), Positives = 80/205 (39%), Gaps = 23/205 (11%) Query: 395 KLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVA-RTT 453 +L E+L A + L F + ++++++G+ + T + K + R+ Sbjct: 139 RLREVLHLYKKGAIDGDDLVFEIAKALNVSNEMGLKVLETAFPEFKDLKPESTTLTLRSH 198 Query: 454 LLPGLLKTIAA-NRKMPLPLKLFEISDIVIKDSNTDVGAKNYRH--LCAVY---YNKNPG 507 + G T+++ +K LPLKLF I ++ D H C V + + G Sbjct: 199 MTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQREDRSHLMSYHSASCVVVGEDVSVDDG 258 Query: 508 FEIIHGLLDRI-MQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFARGQSVGK------ 560 + GLL + P E K Y + P E++A +G+ Sbjct: 259 KVVAEGLLAQFGFTKFKFKPDEKKSKY---------YTPETQTEVYAYHPKLGEWIEVAT 309 Query: 561 LGVLHPDVITKFELTMPCSSLEINV 585 GV P + K+ + +P +L + V Sbjct: 310 FGVYSPIALAKYNIDVPVMNLGLGV 334 >2BK2-A nrPDB Length = 456 Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 9/51 (17%) Query: 218 PLYPVIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECTGTDFTKAKIVLD 268 P YP+ Y S + D+S V+ + +IE T T+++K KI LD Sbjct: 312 PAYPISYTS---------VFLKDNSVAAVHNKTDYIETTSTEYSKGKINLD 353 >1POI-B nrPDB Length = 260 Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 27/59 (45%) Query: 399 LLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPG 457 +L+ D A + S ED+ + G D+ +KAV + P A ++ R + PG Sbjct: 195 ILKFDEKTKRMYLAAYYPTSSPEDVLENTGFDLDVSKAVELEAPDPAVIKLIREEIDPG 253 >5C8B-B nrPDB Length = 514 Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 27/59 (45%) Query: 135 RYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYT 193 Y S E+ E L + + + +A ++LD G F+YT + I F +T + T Sbjct: 406 HYYSTAEIDENLKRPVVKALNALAKFRNELDAFDGTFSYTTDDDTSISFTWRGETSQAT 464 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3L4G-B nrPDB 914 0.0 2CXI-A nrPDB 440 e-124 3PCO-B nrPDB 364 e-101 4P71-A nrPDB 361 e-100 2RHQ-B nrPDB 302 3e-82 1PYS-B nrPDB 268 5e-72 Sequences not found previously or not previously below threshold: 6JP2-A nrPDB 39 0.004 2DU4-A nrPDB 37 0.017 4Z4L-A nrPDB 32 0.61 2ZNJ-A nrPDB 32 0.66 2ODR-C nrPDB 32 0.81 3J15-A nrPDB 31 1.5 2Z0M-A nrPDB 30 2.2 2WIN-I nrPDB 29 7.6 2OK5-A nrPDB 29 7.6 1DLE-A nrPDB 29 8.8 CONVERGED! >3L4G-B nrPDB Length = 589 Score = 914 bits (2361), Expect = 0.0, Method: Composition-based stats. Identities = 588/589 (99%), Positives = 589/589 (100%) Query: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV Sbjct: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60 Query: 61 VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF 120 VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF Sbjct: 61 VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIITEETAKIRPF 120 Query: 121 AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD 180 AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD Sbjct: 121 AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTAKRPSD 180 Query: 181 IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGD 240 IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGD Sbjct: 181 IKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGD 240 Query: 241 HSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFP 300 HSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFP Sbjct: 241 HSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFP 300 Query: 301 ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH 360 ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH Sbjct: 301 ELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIH 360 Query: 361 ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ 420 ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ Sbjct: 361 ACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQ 420 Query: 421 EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI 480 EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI Sbjct: 421 EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI 480 Query: 481 VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG 540 VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG Sbjct: 481 VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG 540 Query: 541 PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINVGPFL 589 PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEIN+GPFL Sbjct: 541 PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIGPFL 589 >2CXI-A nrPDB Length = 348 Score = 440 bits (1132), Expect = e-124, Method: Composition-based stats. Identities = 119/380 (31%), Positives = 198/380 (52%), Gaps = 38/380 (10%) Query: 1 MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDV 60 MP V + L + +GR+++ EE+++L ELD++ E N K Sbjct: 1 MPKFDVSKSDLERLIGRSFSIEEWEDLVLYAKCELDDVWEE---------NGK------- 44 Query: 61 VLYKIDVP-ANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLIIT----EETA 115 V +K+D NR DL EG+ R ++ A ++ +P +++K +T E+ Sbjct: 45 VYFKLDSKDTNRPDLWSAEGVARQIKW------ALGIEKGLPKYEVKKSNVTVYVDEKLK 98 Query: 116 KIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLDTLSGPFTYTA 175 IRP+ V A++ ++ +D I+LQEK+ R+R VAIG D D + P Y A Sbjct: 99 DIRPYGVYAIVEGLRLDEDSLSQMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPIYYKA 158 Query: 176 KRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPP 235 ++ KF PL +E T E++ ++ + Y H+I++K YP++ DS G VLSMPP Sbjct: 159 AEKTE-KFAPLGYKEEMTLEEILEKHEKG---REYGHLIKDKQFYPLLIDSEGNVLSMPP 214 Query: 236 IINGDHS-RITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNG 294 IIN + + R+T +T+N+FI+ TG K + L+++VT + E + + VV+ + Sbjct: 215 IINSEFTGRVTTDTKNVFIDVTGWKLEKVMLALNVMVTALA---ERGGKIRSVRVVYKDF 271 Query: 295 KSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPT 354 + T P+L ++ V D I K G+ + +LL +M + E+ + +++ P Sbjct: 272 EIET-PDLTPKEFEVELDYIRKLSGLELNDGEIKELLEKMMYEVEI--SRGRAKLKYPAF 328 Query: 355 RADIIHACDIVEDAAIAYGY 374 R DI+HA DI+ED IAYGY Sbjct: 329 RDDIMHARDILEDVLIAYGY 348 >3PCO-B nrPDB Length = 795 Score = 364 bits (934), Expect = e-101, Method: Composition-based stats. Identities = 112/577 (19%), Positives = 207/577 (35%), Gaps = 108/577 (18%) Query: 64 KIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKI--QKLIITEETAKIRPFA 121 +I V NR D L + G+ R + V + V ++P G L IT E + P Sbjct: 159 EISVTPNRADCLGIIGVARDVAVLNQL--PLVQPEIVPVGATIDDTLPITVEAPEACPRY 216 Query: 122 VAAVLRNIKFTKD---------------RYDSFIELQEKLHQNICRKRALVAIGTHDLDT 166 + V++ I D+ +++ + + + + D D Sbjct: 217 LGRVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQ-----PMHAFDKDR 271 Query: 167 LSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDS 226 + G + + + A L VI D Sbjct: 272 IEGGIVVRMAKEGETLVLLDGTEAKLNADTL------------------------VIADH 307 Query: 227 NGVVLSMPPIINGDHSRITVNTRNIFIECT--------------------------GTDF 260 N L+M I G+HS + T+N+ +EC G D Sbjct: 308 NKA-LAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRYERGVDP 366 Query: 261 TKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGI 320 ++ + + C EA V+ ++ T P+ A +R +++ +G Sbjct: 367 ALQHKAMERATRLLIDICGG----EAGPVIDITNEA-TLPKRA--TITLRRSKLDRLIGH 419 Query: 321 RETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQ-- 378 E + +L R L EV ++ + P R D+ D+VE+ A YGYNNI Sbjct: 420 HIADEQVTDILRR--LGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 379 ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATK 435 +L L ++ LL G+ E +T++ + + Sbjct: 478 PVQASLIMGTHREADLSLKRVKTLLND----KGYQEVITYSFVDP----KVQQMIHPGVE 529 Query: 436 AVHISNPKTAEFQVARTTLLPGLLKTIAANR-KMPLPLKLFEISDIVIKDSNTDVGAKNY 494 A+ + +P + E R +L GLL T+ N+ + +++FE + D+ +G + Sbjct: 530 ALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQD 589 Query: 495 RHLCAV--------YYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPG 546 L V ++N + L + +LD+ ++ + +A PA PG Sbjct: 590 LMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGKLNEVEF--RAEANPALHPG 647 Query: 547 RCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEI 583 + A I+ +G+ +G +GV+HP++ K +L E+ Sbjct: 648 QSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVFEL 684 Score = 30.1 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 32/149 (21%) Query: 3 TVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAAGASDVVL 62 T++++R L + +G DE+ ++ G E+ E E + ++ Sbjct: 405 TITLRRSKLDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVA---------------- 448 Query: 63 YKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDGKIQKLII--TEETAKIRPF 120 P+ R+D+ E LV +E + Y +PD +Q +I T A + Sbjct: 449 -----PSWRFDMEIEEDLV------EEVARVYGYNN-IPDEPVQASLIMGTHREADLSLK 496 Query: 121 AVAAVLRNIKFTKDRYDSFI--ELQEKLH 147 V +L + + + SF+ ++Q+ +H Sbjct: 497 RVKTLLNDKGYQEVITYSFVDPKVQQMIH 525 >4P71-A nrPDB Length = 792 Score = 361 bits (927), Expect = e-100, Method: Composition-based stats. Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 50/399 (12%) Query: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 VI D L++ ++ G+HS ++ +TR++F+E Sbjct: 302 VIADHQRA-LAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTDSSHRFE 360 Query: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 G D A+ ++ + + E +V ++H P++A +RA+ + Sbjct: 361 RGVDSQLARKAMERATRLILDIVGG----EPGPIVEQVSEAH-LPKVAP--ITLRAERVT 413 Query: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 + +G+ + +LL + L G+G Q + +P R DI D++E+ A YGYN Sbjct: 414 QMLGMPLDAAEIVRLLQALELTVVADGEG-QWSVGVPSHRFDISLEVDLIEELARLYGYN 472 Query: 376 NIQMTLPKTYTIANQFP-LNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISAT 434 + + P+ N P LLR + A G+ EA+TF+ A D T Sbjct: 473 RLPVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDP---ALFELFDP-GT 528 Query: 435 KAVHISNPKTAEFQVARTTLLPGLLKTIAAN-RKMPLPLKLFEISDIVI------KDSNT 487 + + ++NP +A+ R++L PGL+K + N + ++LFE + K Sbjct: 529 QPLTLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQLEGLKQEAM 588 Query: 488 DVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGR 547 GA + L + N G + D ++ + G G + E PA PG+ Sbjct: 589 LAGAICGKRLPEGWANGRDGVDFFDAKAD--VEAVLASAGA-LGDFSFVPGEHPALHPGQ 645 Query: 548 CAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINVG 586 A I G+ VG LG LHP++ K +L P E+ + Sbjct: 646 TARIEREGRLVGYLGALHPELAKKLDLEQPVFLFELLLA 684 >2RHQ-B nrPDB Length = 795 Score = 302 bits (773), Expect = 3e-82, Method: Composition-based stats. Identities = 78/395 (19%), Positives = 155/395 (39%), Gaps = 46/395 (11%) Query: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECTGTDFTKAK----------------- 264 ++ + +++ ++ GD S +T T N+ IE D + Sbjct: 306 IVISNGQEPIALAGVMGGDFSEVTEQTTNVVIEGAIFDPVSIRHTSRRLNLRSEASSRFE 365 Query: 265 --IVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRE 322 I + + C + + EV+ S + A+ +NK +G Sbjct: 366 KGIATEFVDEAVDRACYLLQELASGEVLQDRVSSGDLGSFV-TPIDITAEKVNKTIGFNL 424 Query: 323 TPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLP 382 + + + + ++ ++ + G+ + + +P R DI D++E+ A YGY+ I +LP Sbjct: 425 SNDEIQSIFRQLGFETTLKGE--TLTVNVPSRRKDITIKEDLIEEVARIYGYDEIPSSLP 482 Query: 383 --KTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHIS 440 T T L+ + AG +A+T++L S++ D + + + Sbjct: 483 VFGEVTSGELTDRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKD---FALQERPTISLL 539 Query: 441 NPKTAEFQVARTTLLPGLLKTIAAN-RKMPLPLKLFEISDIVIKDSNTDV--------GA 491 P + R +LLP L++ A N + ++L+EI + + ++ G Sbjct: 540 MPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRLYEIGRVFFGNGEGELPDEVEYLSGI 599 Query: 492 KNYRHLCAVYYNKNP--GFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCA 549 ++ + K F I G++DR+ + L++ + KA + PGR A Sbjct: 600 LTGEYVVNAWQGKKEEIDFFIAKGVVDRVAEKLNL-------EFSYKAGKIEGLHPGRTA 652 Query: 550 EIFARGQSVGKLGVLHPDVITKFELTMPCSSLEIN 584 + GQ +G +G LHP V +L E+N Sbjct: 653 IVSLEGQDIGFIGELHPQVAADNDLKR-TYVFELN 686 >1PYS-B nrPDB Length = 785 Score = 268 bits (685), Expect = 5e-72, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 139/380 (36%), Gaps = 40/380 (10%) Query: 231 LSMPPIINGDHSRITVNTRNIFIECTGTDFTKAKIVLDI------IVTMFSEYCENQFTV 284 L + ++ G S + +T I +E D + F + V Sbjct: 311 LGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTEASHRFERGVDPLGQV 370 Query: 285 EAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVI--- 341 A ++ +A + ++ A I PE +LL Y ++E I Sbjct: 371 PAQRRALSLLQALAGARVA--EALLEAGSPKPPEAIPFRPEYANRLLGTSYPEAEQIAIL 428 Query: 342 --------GDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQ--- 390 G+G + P R D+ D+VE+ A GY I + LP + + Sbjct: 429 KRLGCRVEGEGPTYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLALPAFFPAPDNRGV 488 Query: 391 -FPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQV 449 P K + LR ++ GF E T++ ED ++ K A Sbjct: 489 EAPYRK-EQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPLAPEKAA---- 543 Query: 450 ARTTLLPGLLKTIAANRKMPLPLK--LFEISDIVIKDSNTDVGAKNYRHLCAVYYNKN-- 505 RT L PGL++ + N + P + LFE+ + + T + + + + K Sbjct: 544 LRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFREREETHLAGLLFGEGVGLPWAKERL 603 Query: 506 PGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFARGQSVGKLGVLH 565 G+ ++ G L+ + L + + ++A P PG + G+ VG LG LH Sbjct: 604 SGYFLLKGYLEALFARLGL-------AFRVEAQAFPFLHPGVSGRVLVEGEEVGFLGALH 656 Query: 566 PDVITKFELTMPCSSLEINV 585 P++ + EL P E+ + Sbjct: 657 PEIAQELELP-PVHLFELRL 675 >6JP2-A nrPDB Length = 278 Score = 39.4 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 18/176 (10%) Query: 389 NQFPLNKLTELLRHD---MAAAGFTEALTFALCSQEDIADKLGV-DISATKAVHISNPKT 444 + LT+L+ + A GF E T S++ +A D K V + K Sbjct: 59 ANPSRHGLTQLMNDIADALVAEGFIEVRTPIFISKDALARMTITEDKPLFKQVFWIDEKR 118 Query: 445 AEFQVARTTLLPGLLKTIAANRKM-PLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYN 503 A R L P L + R P+K+FE+ K+S++ + + + L V Sbjct: 119 A----LRPMLAPNLYSVMRDLRDHTDGPVKIFEMGSCFRKESHSGMHLEEFTMLNLVDMG 174 Query: 504 KN-PGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFARGQSV 558 E++ + +M+ +P Y + E + ++ GQ V Sbjct: 175 PRGDATEVLKNYISVVMKAAGLP------DYDLVQEESDVYK--ETIDVEINGQEV 222 >2DU4-A nrPDB Length = 534 Score = 37.4 bits (85), Expect = 0.017, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 78/235 (33%), Gaps = 30/235 (12%) Query: 379 MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEA-------------LTFALCSQEDIAD 425 TLPK + + ++ + + ++ + E L++ + D+ D Sbjct: 98 ATLPKPNVGISAEKIRQIEAITKREVDSKPLQEIFHRYKKGEIDGDDLSYLIAEVLDVDD 157 Query: 426 KLGVDI--SATKAVHISNPKTAEFQVARTTLLPGLLKTIAANR-KMPLPLKLFEISDIVI 482 V I P ++ R+ + G T++ K+PLP+KLF I Sbjct: 158 ITAVKILDEVFPEFKELKPISSTL-TLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFR 216 Query: 483 KDSNTDVGAKNYRHLCA--VYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG 540 + + Y + A V ++ + + + +++ + Sbjct: 217 -REQGEDATRLYTYFSASCVLVDEELSVDDGKAVAEALLRQFGFENFRFRKDEKRSKYYI 275 Query: 541 P-------AFFP---GRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINV 585 P AF P G + + G+ P + ++++ P +L + V Sbjct: 276 PDTQTEVFAFHPKLVGSSTKYSDGWIEIATFGIYSPTALAEYDIPYPVMNLGLGV 330 >4Z4L-A nrPDB Length = 402 Score = 32.4 bits (72), Expect = 0.61, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 27/67 (40%) Query: 39 TSEKEIISKEQGNVKAAGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKERIKAPVYKR 98 EKE + V A+ + L+ ++ N Y LL L+ + L+ +YK+ Sbjct: 176 WQEKENRFLSENGVIASKTMNTHLHVLESYTNLYRLLKLDDVYEALEWIVRLFVDKIYKK 235 Query: 99 VMPDGKI 105 K+ Sbjct: 236 GTGHFKV 242 >2ZNJ-A nrPDB Length = 308 Score = 32.0 bits (71), Expect = 0.66, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 6/109 (5%) Query: 381 LPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADK-LGVDISATKAVHI 439 L + T+ ++ L +L E L + GF + +T + ++ +A +G D V Sbjct: 81 LEQLRTVKHRPALLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFW 140 Query: 440 SNPKTAEFQVARTTLLPGLLKTIAANRKM-PLPLKLFEISDIVIKDSNT 487 + K + R L P L ++ P+++FEI K+S Sbjct: 141 LDGK----KCLRPMLAPNLYTLWRELERLWDKPIRIFEIGTCYRKESQG 185 >2ODR-C nrPDB Length = 701 Score = 32.0 bits (71), Expect = 0.81, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 10/144 (6%) Query: 449 VARTTLLPGLLKTIAA-NRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPG 507 R+ + G T++ K PLP KLF I ++ D H + G Sbjct: 201 TLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAG-EG 259 Query: 508 FEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFA------RGQSVGKL 561 +I G I + L G ++ + + P E++A V Sbjct: 260 VDINDGK--AIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATF 317 Query: 562 GVLHPDVITKFELTMPCSSLEINV 585 GV P ++K+ + +P +L + V Sbjct: 318 GVYSPVALSKYGIDVPVMNLGLGV 341 >3J15-A nrPDB Length = 357 Score = 30.9 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 66 DVPANRYDLLCLEGLVRGLQVFKERIKAPVYKRVMPDG-KIQKLIITEETAKIRPFAVAA 124 DV +++ E + + + +K YK + ++ K ++ E+T+ + Sbjct: 185 DVAKTMEEVMKRENVEKAIVAGPGFVKEDFYKFLKEKYPELAKKVVIEDTSVTGRTGIYE 244 Query: 125 VLR----NIKFTKDRYDSFIELQEKLHQNICRKRALVAIGTHDLD 165 V++ + + ++R ++L EK+ +NI R LVA G +++ Sbjct: 245 VIKRGVVDRVYQENRVAKEVQLVEKVLENIARNNGLVAYGLKEVE 289 >2Z0M-A nrPDB Length = 337 Score = 30.5 bits (67), Expect = 2.2, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 51/142 (35%), Gaps = 8/142 (5%) Query: 421 EDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI 480 E+I +G+ K VH+ + ++ Q R G++ + ++ ++LF+ + Sbjct: 186 EEIEACIGLANVEHKFVHVKDDWRSKVQALRENKDKGVIVFVRTRNRVAKLVRLFDNAIE 245 Query: 481 VIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDVPPGEDKGGYVIKASEG 540 + D V +N + I + R LD+P E + Sbjct: 246 LRGDLPQSVRNRN----IDAFREGEYDMLITTDVASR---GLDIPLVEKVINFDAPQDLR 298 Query: 541 PAFFP-GRCAEIFARGQSVGKL 561 GR + +G+++ + Sbjct: 299 TYIHRIGRTGRMGRKGEAITFI 320 >2WIN-I nrPDB Length = 507 Score = 28.6 bits (62), Expect = 7.6, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 44 IISKEQGNVKAAGASDVVLYKIDVP-----ANRYDLL-CLEGLVRGLQVFKERIKAPVYK 97 I K++ + DV L K+ R L C EG R L++ + Sbjct: 302 INGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKE 361 Query: 98 RVMPDGKIQKLIITEETAKIRPFAVA 123 ++P I+ L ++EE K+ V Sbjct: 362 ELLPAQDIKALFVSEEEKKLTRKEVY 387 >2OK5-A nrPDB Length = 752 Score = 28.6 bits (62), Expect = 7.6, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 44 IISKEQGNVKAAGASDVVLYKIDVP-----ANRYDLL-CLEGLVRGLQVFKERIKAPVYK 97 I K++ + DV L K+ R L C EG R L++ + Sbjct: 546 INGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKE 605 Query: 98 RVMPDGKIQKLIITEETAKIRPFAVA 123 ++P I+ L ++EE K+ V Sbjct: 606 ELLPAQDIKALFVSEEEKKLTRKEVY 631 >1DLE-A nrPDB Length = 298 Score = 28.6 bits (62), Expect = 8.8, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 44 IISKEQGNVKAAGASDVVLYKIDVP-----ANRYDLL-CLEGLVRGLQVFKERIKAPVYK 97 I K++ + DV L K+ R L C EG R L++ + Sbjct: 95 INGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKE 154 Query: 98 RVMPDGKIQKLIITEETAKIRPFAVA 123 ++P I+ L ++EE K+ V Sbjct: 155 ELLPAQDIKALFVSEEEKKLTRKEVY 180 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.127 0.319 Lambda K H 0.267 0.0391 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,778,033 Number of Sequences: 36641 Number of extensions: 746441 Number of successful extensions: 2249 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 2173 Number of HSP's gapped (non-prelim): 44 length of query: 589 length of database: 10,336,785 effective HSP length: 102 effective length of query: 487 effective length of database: 6,599,403 effective search space: 3213909261 effective search space used: 3213909261 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 62 (28.6 bits)