BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9NPH0
         (428 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4JOD-A nrPDB                                                          828   0.0  
1RPA-A nrPDB                                                           96   3e-20
1ND5-A nrPDB                                                           96   3e-20
5CDH-A nrPDB                                                           74   2e-13
1ODT-C nrPDB                                                           33   0.19 
2RL1-A nrPDB                                                           31   0.89 
4PKI-G nrPDB                                                           30   2.0  
3K4P-A nrPDB                                                           30   2.2  
5MDN-A nrPDB                                                           29   3.9  

>4JOD-A nrPDB
          Length = 396

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/396 (100%), Positives = 396/396 (100%)

Query: 33  ELQEADGQCPVDRSLLKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYT 92
           ELQEADGQCPVDRSLLKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYT
Sbjct: 1   ELQEADGQCPVDRSLLKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYT 60

Query: 93  VTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSP 152
           VTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSP
Sbjct: 61  VTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSP 120

Query: 153 TFNPQEVFIRSTNIFRNLESTRCLLAGLFQCQKEGPIIIHTDEADSEVLYPNYQSCWSLR 212
           TFNPQEVFIRSTNIFRNLESTRCLLAGLFQCQKEGPIIIHTDEADSEVLYPNYQSCWSLR
Sbjct: 121 TFNPQEVFIRSTNIFRNLESTRCLLAGLFQCQKEGPIIIHTDEADSEVLYPNYQSCWSLR 180

Query: 213 QRTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKR 272
           QRTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKR
Sbjct: 181 QRTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKR 240

Query: 273 FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA 332
           FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA
Sbjct: 241 FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA 300

Query: 333 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL 392
           AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL
Sbjct: 301 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL 360

Query: 393 CPLDMFLNAMSVYTLSPEKYHALCSQTQVMEVGNEE 428
           CPLDMFLNAMSVYTLSPEKYHALCSQTQVMEVGNEE
Sbjct: 361 CPLDMFLNAMSVYTLSPEKYHALCSQTQVMEVGNEE 396


>1RPA-A nrPDB
          Length = 342

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 159/374 (42%), Gaps = 75/374 (20%)

Query: 49  KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDS 108
           +LK V +VFRHG R P++  P                                     + 
Sbjct: 2   ELKFVTLVFRHGDRGPIETFP-------------------------------------ND 24

Query: 109 QYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFR 168
              E++   G   GQLTK GM Q + LG  +R+ Y     FL+ ++   +V+IRST++ R
Sbjct: 25  PIKESSWPQGF--GQLTKWGMGQHYELGSYIRRRYGR---FLNNSYKHDQVYIRSTDVDR 79

Query: 169 NLESTRCLLAGLFQCQKEG---------PIIIHTDE-ADSEVLYPNYQSC---WSLRQRT 215
            L S    LA LF  +            PI +HT   ++  +LY  ++ C     L+  T
Sbjct: 80  TLMSAMTNLAALFPPEGNSIWNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQELKSET 139

Query: 216 -RGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFI-LLDNVAAEQAHN--LPSCPMLK 271
            +       LQP  S  +  +    G +  D  + +  L D +  E  HN  LP+     
Sbjct: 140 LKSEEFLKRLQPYKSF-IDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWATED 198

Query: 272 RFARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLY 331
              ++ E   +         + +E  ++  G    +L + +LK M  AT P K RKL +Y
Sbjct: 199 AMTKLKELSELSLLSLYGIHKQKEKSRLQGG----VLVNEILKNMKLATQPQKARKLIMY 254

Query: 332 AAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ-------V 384
           +AHD T   L M L +++   PP+A    MELYQ  ++   FV++YY  + Q       +
Sbjct: 255 SAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQ--DNGGHFVEMYYRNETQNEPYPLTL 312

Query: 385 PRGCPDGLCPLDMF 398
           P GC    CPL+ F
Sbjct: 313 P-GCTHS-CPLEKF 324


>1ND5-A nrPDB
          Length = 354

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 168/395 (42%), Gaps = 75/395 (18%)

Query: 49  KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDS 108
           +LK V +VFRHG RSP+   P +   E                     +  P+ +     
Sbjct: 2   ELKFVTLVFRHGDRSPIDTFPTDPIKE---------------------SSWPQGF----- 35

Query: 109 QYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFR 168
                        GQLT++GM+Q + LGE +RK Y +   FL+ ++  ++V+IRST++ R
Sbjct: 36  -------------GQLTQLGMEQHYELGEYIRKRYRK---FLNESYKHEQVYIRSTDVDR 79

Query: 169 NLESTRCLLAGLFQCQKEG---------PIIIHTDE-ADSEVLYPNYQSCWSLRQRTRGR 218
            L S    LA LF  +            PI +HT   ++ ++LY  +++C   ++     
Sbjct: 80  TLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQLLYLPFRNCPRFQELESET 139

Query: 219 RQTASLQPGI---SEDLKKVKDRMGIDSSDKVDFFI-LLDNVAAEQAHN--LPSCPMLKR 272
            ++   Q  +    + +  +    G+   D    +  + D +  E  HN  LPS      
Sbjct: 140 LKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKVYDPLYCESVHNFTLPSWATEDT 199

Query: 273 FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA 332
             ++ E   +         + +E  ++  G    +L + +L  M  AT     +KL +Y+
Sbjct: 200 MTKLRELSELSLLSLYGIHKQKEKSRLQGG----VLVNEILNHMKRATQIPSYKKLIMYS 255

Query: 333 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ-------VP 385
           AHD T   L M L +++   PP+A     ELY   E  E+FV++YY  + Q       +P
Sbjct: 256 AHDTTVSGLQMALDVYNGLLPPYASCHLTELY--FEKGEYFVEMYYRNETQHEPYPLMLP 313

Query: 386 RGCPDGLCPLDMFLNAMSVYTLSPEKYHALCSQTQ 420
              P   CPL+ F  A  V  + P+ +   C  T 
Sbjct: 314 GCSPS--CPLERF--AELVGPVIPQDWSTECMTTN 344


>5CDH-A nrPDB
          Length = 336

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 28/299 (9%)

Query: 122 GQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFRNLESTRCLLAGLF 181
           GQLT  GMQQ + +G   RK Y+E++  L   +    +++RST+  R L S + LL GL+
Sbjct: 31  GQLTAEGMQQEYKMGVAFRKKYIEELHLLPEHYEYGTIYVRSTDYARTLMSAQSLLMGLY 90

Query: 182 QCQKEGPIIIHTDEADSEVLYP--------NYQSCWSLRQRTRGRRQTASLQPGIS---- 229
                GP I     A      P         Y     ++Q  R  R+    Q   S    
Sbjct: 91  P-PGTGPSIPAGTSALPHAFQPIPVFSAPSKYDEV-IIQQVDRKERKKLMEQYVFSTREW 148

Query: 230 -EDLKKVKDR-------MGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKRFARMIEQRA 281
            +   ++KD+        GI+     D   +   +   Q HN    PM +  A    +  
Sbjct: 149 QQKNNELKDKYPLWSRLTGINIDTLEDLETVGHTLYVHQIHN---APMPEGLASNDIETI 205

Query: 282 VDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYAAHDVTFIPL 341
           ++++ +    +++   Q     +   L +N+   ++S +      K  L +AHD T   +
Sbjct: 206 INSAEWAFMAQEKP--QQIANVYSSKLMTNIADYLNSGSMKKSKLKYVLLSAHDTTIASV 263

Query: 342 LMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGLCPLDMFLN 400
           L  LG    K PP+A ++   LY +  +  + V++ Y+G   +   C   +C L   +N
Sbjct: 264 LSFLGAPLEKSPPYASNVNFSLYDN-GANYYTVKITYNGNPVLIPACGGSVCELQQLVN 321


>1ODT-C nrPDB
          Length = 318

 Score = 33.5 bits (75), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 339 IPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVP 385
           +P+LM++G+ D   PP  V      Y HLE+K+      Y G E +P
Sbjct: 259 VPVLMSIGLIDKVTPPSTV---FAAYNHLETKKELKVYRYFGHEYIP 302


>2RL1-A nrPDB
          Length = 424

 Score = 31.2 bits (69), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 310 SNLLKAMDSATAPDKIRKLYLYAAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLES 369
           +N+ +  D  T    +R+L +    D T   LL    I +H   P+      EL + + +
Sbjct: 42  TNVPELKDIETTLKILRQLGVVVDRDATGAVLLDASNI-NHFTAPY------ELVKTMRA 94

Query: 370 KEW----FVQLYYHGKEQVPRGCPDGLCPLDMFLNAM 402
             W     V  ++ G+  +P GC  G  P+D+ ++ +
Sbjct: 95  SIWALAPLVARFHQGQVSLPGGCSIGARPVDLHISGL 131


>4PKI-G nrPDB
          Length = 324

 Score = 30.0 bits (66), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/137 (19%), Positives = 58/137 (42%), Gaps = 11/137 (8%)

Query: 253 LDNVAAEQAHNLPSCPMLKRFARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNL 312
           L+ V      N+P  P LK +A  +++ +      I+     + +  A+   L   E+ +
Sbjct: 172 LEEVNLNNIRNIP-IPTLKAYAEALKENSYVKKFSIVGTRSNDPVAYALAEMLK--ENKV 228

Query: 313 LKAMDSAT---APDKIRKLYLYAAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLES 369
           LK ++  +   +   I +L     ++ + + + +     D++  P    + ME+   LE 
Sbjct: 229 LKTLNVESNFISGAGILRLVEALPYNTSLVEMKI-----DNQSQPLGNKVEMEIVSMLEK 283

Query: 370 KEWFVQLYYHGKEQVPR 386
               ++  YH  +Q PR
Sbjct: 284 NATLLKFGYHFTQQGPR 300


>3K4P-A nrPDB
          Length = 444

 Score = 30.0 bits (66), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 24/100 (24%)

Query: 328 LYLYAAHDVTFIPLLMTLGIFDHKWP---------------------PFAVDLTMELYQH 366
           LY   +HD   I +L  LG+++   P                     PFA  L +E+ Q 
Sbjct: 332 LYADFSHDNGIISILFALGLYNGTKPLSTTTVENITQTDGFSSAWTVPFASRLYVEMMQC 391

Query: 367 LESKEWFVQLYYHGKEQVPRGCPD---GLCPLDMFLNAMS 403
              +E  V++  + +     GCP    G C  D F+  +S
Sbjct: 392 QAEQEPLVRVLVNDRVVPLHGCPVDALGRCTRDSFVRGLS 431


>5MDN-A nrPDB
          Length = 783

 Score = 29.3 bits (64), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 65  LKPLPLEEQVEWNPQLLEVPPQTQ---FDYTVTNLAGGPKP 102
           L PLPL E VEW       PP  +   FD  V N  G P P
Sbjct: 141 LGPLPLYEVVEWAGVEEGFPPPLRVLAFDIEVYNERGSPDP 181


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

4JOD-A nrPDB                                                          628   e-180
1ND5-A nrPDB                                                          414   e-116
1RPA-A nrPDB                                                          407   e-114
5CDH-A nrPDB                                                          355   2e-98

Sequences not found previously or not previously below threshold:

3K4P-A nrPDB                                                           51   9e-07
1SK9-A nrPDB                                                           46   4e-05
2WNI-A nrPDB                                                           44   8e-05
1NT4-A nrPDB                                                           41   0.001
1DKL-A nrPDB                                                           33   0.31 
4K81-A nrPDB                                                           31   0.83 
3SQ8-A nrPDB                                                           31   1.0  
1Q32-A nrPDB                                                           31   1.0  
4KFZ-A nrPDB                                                           30   1.8  
5UJ7-C nrPDB                                                           30   2.4  
1W9Y-A nrPDB                                                           30   2.5  
1JMU-B nrPDB                                                           30   2.6  
5O5B-3 nrPDB                                                           29   3.8  
4ZNQ-A nrPDB                                                           29   3.9  

>4JOD-A nrPDB
          Length = 396

 Score =  628 bits (1620), Expect = e-180,   Method: Composition-based stats.
 Identities = 396/396 (100%), Positives = 396/396 (100%)

Query: 33  ELQEADGQCPVDRSLLKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYT 92
           ELQEADGQCPVDRSLLKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYT
Sbjct: 1   ELQEADGQCPVDRSLLKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYT 60

Query: 93  VTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSP 152
           VTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSP
Sbjct: 61  VTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSP 120

Query: 153 TFNPQEVFIRSTNIFRNLESTRCLLAGLFQCQKEGPIIIHTDEADSEVLYPNYQSCWSLR 212
           TFNPQEVFIRSTNIFRNLESTRCLLAGLFQCQKEGPIIIHTDEADSEVLYPNYQSCWSLR
Sbjct: 121 TFNPQEVFIRSTNIFRNLESTRCLLAGLFQCQKEGPIIIHTDEADSEVLYPNYQSCWSLR 180

Query: 213 QRTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKR 272
           QRTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKR
Sbjct: 181 QRTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKR 240

Query: 273 FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA 332
           FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA
Sbjct: 241 FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA 300

Query: 333 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL 392
           AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL
Sbjct: 301 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL 360

Query: 393 CPLDMFLNAMSVYTLSPEKYHALCSQTQVMEVGNEE 428
           CPLDMFLNAMSVYTLSPEKYHALCSQTQVMEVGNEE
Sbjct: 361 CPLDMFLNAMSVYTLSPEKYHALCSQTQVMEVGNEE 396


>1ND5-A nrPDB
          Length = 354

 Score =  414 bits (1064), Expect = e-116,   Method: Composition-based stats.
 Identities = 100/395 (25%), Positives = 168/395 (42%), Gaps = 75/395 (18%)

Query: 49  KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDS 108
           +LK V +VFRHG RSP+   P +   E                     +  P+ +     
Sbjct: 2   ELKFVTLVFRHGDRSPIDTFPTDPIKE---------------------SSWPQGF----- 35

Query: 109 QYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFR 168
                        GQLT++GM+Q + LGE +RK Y +   FL+ ++  ++V+IRST++ R
Sbjct: 36  -------------GQLTQLGMEQHYELGEYIRKRYRK---FLNESYKHEQVYIRSTDVDR 79

Query: 169 NLESTRCLLAGLFQCQKEG---------PIIIHTDE-ADSEVLYPNYQSCWSLRQRTRGR 218
            L S    LA LF  +            PI +HT   ++ ++LY  +++C   ++     
Sbjct: 80  TLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQLLYLPFRNCPRFQELESET 139

Query: 219 RQTASLQPGI---SEDLKKVKDRMGIDSSDKVDFFI-LLDNVAAEQAHN--LPSCPMLKR 272
            ++   Q  +    + +  +    G+   D    +  + D +  E  HN  LPS      
Sbjct: 140 LKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKVYDPLYCESVHNFTLPSWATEDT 199

Query: 273 FARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLYA 332
             ++ E   +         + +E  ++  G    +L + +L  M  AT     +KL +Y+
Sbjct: 200 MTKLRELSELSLLSLYGIHKQKEKSRLQGG----VLVNEILNHMKRATQIPSYKKLIMYS 255

Query: 333 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ-------VP 385
           AHD T   L M L +++   PP+A     ELY   E  E+FV++YY  + Q       +P
Sbjct: 256 AHDTTVSGLQMALDVYNGLLPPYASCHLTELY--FEKGEYFVEMYYRNETQHEPYPLMLP 313

Query: 386 RGCPDGLCPLDMFLNAMSVYTLSPEKYHALCSQTQ 420
              P   CPL+ F  A  V  + P+ +   C  T 
Sbjct: 314 GCSPS--CPLERF--AELVGPVIPQDWSTECMTTN 344


>1RPA-A nrPDB
          Length = 342

 Score =  407 bits (1045), Expect = e-114,   Method: Composition-based stats.
 Identities = 103/392 (26%), Positives = 163/392 (41%), Gaps = 75/392 (19%)

Query: 49  KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDS 108
           +LK V +VFRHG R P++  P                                     + 
Sbjct: 2   ELKFVTLVFRHGDRGPIETFP-------------------------------------ND 24

Query: 109 QYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFR 168
              E++   G   GQLTK GM Q + LG  +R+ Y     FL+ ++   +V+IRST++ R
Sbjct: 25  PIKESSWPQGF--GQLTKWGMGQHYELGSYIRRRYGR---FLNNSYKHDQVYIRSTDVDR 79

Query: 169 NLESTRCLLAGLFQCQKEG---------PIIIHTDE-ADSEVLYPNYQSCWSLRQRT--- 215
            L S    LA LF  +            PI +HT   ++  +LY  ++ C   ++     
Sbjct: 80  TLMSAMTNLAALFPPEGNSIWNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQELKSET 139

Query: 216 -RGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFI-LLDNVAAEQAHN--LPSCPMLK 271
            +       LQP  S  +  +    G +  D  + +  L D +  E  HN  LP+     
Sbjct: 140 LKSEEFLKRLQPYKS-FIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWATED 198

Query: 272 RFARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLY 331
              ++ E   +         + +E  ++  G    +L + +LK M  AT P K RKL +Y
Sbjct: 199 AMTKLKELSELSLLSLYGIHKQKEKSRLQGG----VLVNEILKNMKLATQPQKARKLIMY 254

Query: 332 AAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ------VP 385
           +AHD T   L M L +++   PP+A    MELYQ  ++   FV++YY  + Q        
Sbjct: 255 SAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQ--DNGGHFVEMYYRNETQNEPYPLTL 312

Query: 386 RGCPDGLCPLDMFLNAMSVYTLSPEKYHALCS 417
            GC    CPL+ F  A  +  + P+ +   C 
Sbjct: 313 PGCTHS-CPLEKF--AELLDPVIPQDWATECM 341


>5CDH-A nrPDB
          Length = 336

 Score =  355 bits (911), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 80/369 (21%), Positives = 137/369 (37%), Gaps = 70/369 (18%)

Query: 52  MVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDSQYH 111
               + RHG R+P+  LP                                          
Sbjct: 3   FAVDIIRHGDRTPIVALPTV---------------------------------------- 22

Query: 112 ETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFRNLE 171
               + G+  GQLT  GMQQ + +G   RK Y+E++  L   +    +++RST+  R L 
Sbjct: 23  NYQWQEGL--GQLTAEGMQQEYKMGVAFRKKYIEELHLLPEHYEYGTIYVRSTDYARTLM 80

Query: 172 STRCLLAGLFQCQKEGPIIIHTDEADSEVLYP--------NYQSCWSLRQRTRGRRQTAS 223
           S + LL GL+     GP I     A      P         Y     ++Q  R  R+   
Sbjct: 81  SAQSLLMGLYPP-GTGPSIPAGTSALPHAFQPIPVFSAPSKYDEV-IIQQVDRKERKKLM 138

Query: 224 LQPGIS-----EDLKKVKDR-------MGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLK 271
            Q   S     +   ++KD+        GI+     D   +   +   Q HN    PM +
Sbjct: 139 EQYVFSTREWQQKNNELKDKYPLWSRLTGINIDTLEDLETVGHTLYVHQIHN---APMPE 195

Query: 272 RFARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAPDKIRKLYLY 331
             A    +  ++++ +    +++   Q     +   L +N+   ++S +      K  L 
Sbjct: 196 GLASNDIETIINSAEWAFMAQEKP--QQIANVYSSKLMTNIADYLNSGSMKKSKLKYVLL 253

Query: 332 AAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDG 391
           +AHD T   +L  LG    K PP+A ++   LY +  +  + V++ Y+G   +   C   
Sbjct: 254 SAHDTTIASVLSFLGAPLEKSPPYASNVNFSLYDN-GANYYTVKITYNGNPVLIPACGGS 312

Query: 392 LCPLDMFLN 400
           +C L   +N
Sbjct: 313 VCELQQLVN 321


>3K4P-A nrPDB
          Length = 444

 Score = 51.0 bits (120), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 81/427 (18%), Positives = 138/427 (32%), Gaps = 92/427 (21%)

Query: 49  KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQ--TQFDYTVTNLAGGPKPYSPY 106
           ++   QV+ RHGAR      P + + +    L+E   Q  T FD     L          
Sbjct: 49  RVTFAQVLSRHGAR-----YPTDSKGKKYSALIEEIQQNATTFDGKYAFL---------- 93

Query: 107 DSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNI 166
                  T    + A  LT  G Q++   G +  + Y      + P       FIRS+  
Sbjct: 94  ------KTYNYSLGADDLTPFGEQELVNSGIKFYQRYESLTRNIVP-------FIRSSGS 140

Query: 167 FRNLESTRCLLAGL---------FQCQKEGP---IIIHTDEADSEVLYPNYQSCWSLRQR 214
            R + S +  + G           Q  +  P   ++I    + +  L P   + +   + 
Sbjct: 141 SRVIASGKKFIEGFQSTKLKDPRAQPGQSSPKIDVVISEASSSNNTLDPGTCTVFEDSEL 200

Query: 215 --TRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFIL----LDNVAAEQAHNLPSCP 268
             T     TA+  P I + L+   D  G+  +D    +++     D ++        S P
Sbjct: 201 ADTVEANFTATFVPSIRQRLEN--DLSGVTLTDTEVTYLMDMCSFDTISTSTVDTKLS-P 257

Query: 269 MLKRFAR---MIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLL----------KA 315
               F     +          Y                + + L + L             
Sbjct: 258 FCDLFTHDEWINYDYLQSLKKYYGHGAGNPLGPTQGVGYANELIARLTHSPVHDDTSSNH 317

Query: 316 MDSATAPDKIRKLYLYA--AHDVTFIPLLMTLGIFDHKWP-------------------- 353
              ++         LYA  +HD   I +L  LG+++   P                    
Sbjct: 318 TLDSSPATFPLNSTLYADFSHDNGIISILFALGLYNGTKPLSTTTVENITQTDGFSSAWT 377

Query: 354 -PFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPD---GLCPLDMFLNAMSVYTLSP 409
            PFA  L +E+ Q    +E  V++  + +     GCP    G C  D F+  +S +  S 
Sbjct: 378 VPFASRLYVEMMQCQAEQEPLVRVLVNDRVVPLHGCPVDALGRCTRDSFVRGLS-FARSG 436

Query: 410 EKYHALC 416
             + A C
Sbjct: 437 GDW-AEC 442


>1SK9-A nrPDB
          Length = 439

 Score = 45.6 bits (106), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 71/410 (17%), Positives = 128/410 (31%), Gaps = 83/410 (20%)

Query: 49  KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDS 108
           ++ +VQV+ RHGAR      P   + +   +L+        D+         K    +  
Sbjct: 45  RITLVQVLSRHGAR-----YPTSSKSKKYKKLVTAIQANATDF---------KGKFAFLK 90

Query: 109 QYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFR 168
            Y+ T     + A  LT  G QQ+   G +  + Y      + P       FIR++   R
Sbjct: 91  TYNYT-----LGADDLTPFGEQQLVNSGIKFYQRYKALARSVVP-------FIRASGSDR 138

Query: 169 NLESTRCLLAGLFQCQKEGP---------IIIHTDEADSEVLYPNYQSCWSLRQRTRGRR 219
            + S    + G  Q +   P         I +   E+++     ++  C        G  
Sbjct: 139 VIASGEKFIEGFQQAKLADPGATNRAAPAISVIIPESETFNNTLDHGVCTKFEASQLGDE 198

Query: 220 QTASLQPGISEDLKKV--KDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKRFARMI 277
             A+     + D++    K   G+  +D  D   L+D  + +          L  F ++ 
Sbjct: 199 VAANFTALFAPDIRARAEKHLPGVTLTD-EDVVSLMDMCSFDTVARTSDASQLSPFCQLF 257

Query: 278 EQRAV-------DTSLYILPKEDRESLQMAVGPFLHILESNLLKA-------------MD 317
                           Y                F + L + L ++              +
Sbjct: 258 THNEWKKYNYLQSLGKYYGYGAGNPLGPAQGIGFTNELIARLTRSPVQDHTSTNSTLVSN 317

Query: 318 SATAPDKIRKLYLYAAHDVTFIPLLMTLGIFDHKWP---------------------PFA 356
            AT P        ++ HD + + +   LG+++   P                     PF 
Sbjct: 318 PATFPLNATMYVDFS-HDNSMVSIFFALGLYNGTEPLSRTSVESAKELDGYSASWVVPFG 376

Query: 357 VDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPD---GLCPLDMFLNAMS 403
                E  Q    KE  V+   + +     GC     G C L+ F+  +S
Sbjct: 377 ARAYFETMQCKSEKEPLVRALINDRVVPLHGCDVDKLGRCKLNDFVKGLS 426


>2WNI-A nrPDB
          Length = 418

 Score = 44.5 bits (103), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 130/398 (32%), Gaps = 72/398 (18%)

Query: 66  KPLPLEEQVEWNPQLLEV---PPQTQFDYTVTNLAGGPKPYSPYDSQYHETTLKGGMFAG 122
            P P + Q+E   +L      PP       +    G P                     G
Sbjct: 8   DPPPRDWQLEKVVELSRAGIRPPTAGNREAIEAATGRPWTEWTTHD-------------G 54

Query: 123 QLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFRNLESTRCLLAGLFQ 182
           +LT  G   +   G    ++Y +     +     + +++R++ + R   + + L+ G F 
Sbjct: 55  ELTGHGYAAVVNKGREEGQHYRQLGLLQAGCPTAESIYVRASPLQRTRATAQALVDGAFP 114

Query: 183 CQKEGPIIIHTDEADSEVLYP---------NYQSCWSLRQR-----TRGRRQTASLQ--- 225
               G  I + +     +              +   +++++      R +    ++Q   
Sbjct: 115 --GCGVAIHYANGDADPLFQTDKFAATQTDPARQLAAVKEKAGDLAQRRQALAPTIQLLK 172

Query: 226 ----------PGISEDLKKVKDRMG-IDSSDKVDFFILLDNVAAEQAHNLPSCPMLKRFA 274
                     P      +  + + G    S       +++ +    + NLP   +   + 
Sbjct: 173 QAVCQADKPCPIFDTPWRVEQSKSGKTTISGLSVMANMVETLRLGWSENLPLSQL--AWG 230

Query: 275 RMIEQRAVDTSLYILPKEDRESLQMA---VGPFLHILESNLLKAMDSATAPDKIRKLYLY 331
           ++ +   + T+L  L  E+ +              +L + +L  +    +P+   +  L 
Sbjct: 231 KIAQASQI-TALLPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEASPN--VRWLLL 287

Query: 332 AAHDVTFIPLLMTL-------GIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQV 384
            AHD     +   +       G      PP    L +E ++  +S E ++++Y+  +   
Sbjct: 288 VAHDTNIAMVRTLMNFSWQLPGYSRGNIPP-GSSLVLERWRDAKSGERYLRVYFQAQ--- 343

Query: 385 PRGCPDGLCPLDMFLNAMSVYTLSPEKYHAL-CSQTQV 421
                 GL  L       + + +  +++    C QT V
Sbjct: 344 ------GLDDLRRLQTPDAQHPMLRQEWRQPGCRQTDV 375


>1NT4-A nrPDB
          Length = 391

 Score = 41.0 bits (94), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/354 (16%), Positives = 104/354 (29%), Gaps = 66/354 (18%)

Query: 108 SQYHETTLKG-GMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLS-PTFNPQEVFIRSTN 165
            Q          +  GQLT  G      +G  +R+   E     S     P  V+  + +
Sbjct: 32  EQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANS 91

Query: 166 IFRNLESTRCLLAGLFQ---------------CQKEGPIIIHTDEADS-EVLYPNYQSCW 209
           + R + + +  + G F                     P+I     A S + +    +   
Sbjct: 92  LQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELS 151

Query: 210 SLRQRTR----------------GRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILL 253
            L+                      +Q  SL  G +    K +   G+    KV    L+
Sbjct: 152 KLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVG-NSLV 210

Query: 254 DNVAAEQAHNLPSCPMLKRFARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESNLL 313
           D    +     P   +     +  +Q  V + L    ++   +           L S + 
Sbjct: 211 DAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYID 270

Query: 314 KAMDSATAPDKIRKLYLYAAHDVTFIPLLMTLGIFDHKW------PPFAVDLTMELYQHL 367
           KA+   T      K+ +   HD     LL  L    ++        P    +  + +   
Sbjct: 271 KAL--VTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDS 328

Query: 368 ESKEWFVQL--YYHGKEQV------------------PRGCP---DGLCPLDMF 398
           ++    +++   Y   EQ+                    GCP   DG CP+D F
Sbjct: 329 KANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDADGFCPMDKF 382


>1DKL-A nrPDB
          Length = 410

 Score = 32.9 bits (73), Expect = 0.31,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 106/335 (31%), Gaps = 64/335 (19%)

Query: 48  LKLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYD 107
           LKL+ V +V RHG R+P K                    TQ    VT  A  P       
Sbjct: 6   LKLESVVIVSRHGVRAPTK-------------------ATQLMQDVTPDA-WP------- 38

Query: 108 SQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTF-NPQEVFIRSTNI 166
                 T    +  G LT  G + +  LG   R+  V D            +V I +   
Sbjct: 39  ------TWP--VKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCPQSGQVAIIADVD 90

Query: 167 FRNLESTRCLLAGLFQCQKEGPIIIHT--DEADSEVLYPNYQSCWSLRQRTRGRRQTASL 224
            R  ++     AGL     +  I +HT  D +  + L+   ++   + Q        A  
Sbjct: 91  ERTRKTGEAFAAGLAP---DCAITVHTQADTSSPDPLFNPLKT--GVCQLDNANVTDA-- 143

Query: 225 QPGISEDLKKVKDRMGIDSSDKVDFFILLDNVAAEQAHNLPSCPMLKRFARMIEQRAVDT 284
              +S     + D  G   +   +   +L         N P   +  +  +  E  ++  
Sbjct: 144 --ILSRAGGSIADFTGHRQTAFRELERVL---------NFPQSNLCLKREKQDESCSLTQ 192

Query: 285 SLYILPKEDRESLQMAVGPFLHILESNLLKAMDSATAP--------DKIRKLYLYAAHDV 336
           +L    K   +++ +     L  + + +     +   P        D  +   L + H+ 
Sbjct: 193 ALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNA 252

Query: 337 TFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKE 371
            F  L  T  +   +  P    +   L  H   K+
Sbjct: 253 QFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQ 287


>4K81-A nrPDB
          Length = 258

 Score = 31.4 bits (69), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 41/118 (34%), Gaps = 11/118 (9%)

Query: 51  KMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDSQY 110
           K V  V+     S    +P +       QLL +      D++ T     P        + 
Sbjct: 9   KQVIKVYSEDETSRALDVPSDITARDVCQLLILKNHYIDDHSWTLFEHLPHIGVERTIED 68

Query: 111 HETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTF---NPQEVFIRSTN 165
           HE  ++       L+  G+++   L    RKNY +   F +P +        F   TN
Sbjct: 69  HELVIEV------LSNWGIEEENKL--YFRKNYAKYEFFKNPMYFFPEHMVSFATETN 118


>3SQ8-A nrPDB
          Length = 470

 Score = 31.0 bits (68), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 333 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL 392
           A D T   +L  + + +   PPFA   T  +    ++ E  + L  +    +    P  +
Sbjct: 79  AMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQV 138

Query: 393 C 393
           C
Sbjct: 139 C 139


>1Q32-A nrPDB
          Length = 544

 Score = 31.0 bits (68), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 333 AHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQVPRGCPDGL 392
           A D T   +L  + + +   PPFA   T  +    ++ E  + L  +    +    P  +
Sbjct: 156 AMDATLAVILKKVKLIEITMPPFASHHTKLIINFYDNGECKIFLPSNNFTSMETNLPQQV 215

Query: 393 C 393
           C
Sbjct: 216 C 216


>4KFZ-A nrPDB
          Length = 150

 Score = 30.2 bits (66), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 70  LEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGM 129
           L+   E   ++L++PP            G        D  +HE  L   +   +L +VG 
Sbjct: 2   LDPSEEPVDEVLQIPPSLLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGR 61

Query: 130 QQMFALGERL-RKNYVE 145
           +  + LG +L R++Y+ 
Sbjct: 62  RLYYKLGRKLCRRDYLR 78


>5UJ7-C nrPDB
          Length = 436

 Score = 29.8 bits (65), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 58/189 (30%), Gaps = 17/189 (8%)

Query: 139 LRKNYVEDIPFLSPTFNPQEVFIRSTNIFRNLESTRCLLA-GLFQCQKEGPIIIHTDEAD 197
             + + E++ +LS   + QEV  +  NI +NL S   LL   L +     P +   D   
Sbjct: 245 FAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAVD--- 301

Query: 198 SEVLYPNYQSCWSLRQRTRGRRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFILLDNVA 257
                        L            L       +  +K    I   +  +F ++ +   
Sbjct: 302 -------LMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQ 354

Query: 258 ------AEQAHNLPSCPMLKRFARMIEQRAVDTSLYILPKEDRESLQMAVGPFLHILESN 311
                 A   +N     ++K F  + +   +           RE   M +      + + 
Sbjct: 355 KFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNA 414

Query: 312 LLKAMDSAT 320
           L K  +  T
Sbjct: 415 LQKYPNCPT 423


>1W9Y-A nrPDB
          Length = 319

 Score = 29.8 bits (65), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 10/134 (7%)

Query: 197 DSEVLYPNYQSCWSLRQRTRG--RRQTASLQPGISEDLKKVKDRMGIDSSDKVD-FFILL 253
              +   N      L +  R   R     L+    E L  + + +G++     + F+   
Sbjct: 92  LKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSK 151

Query: 254 DNVAAEQAHNLPSCPMLKRFARMIEQRAVDTSLYILPKEDRESLQMA-------VGPFLH 306
                 +  N P CP       +         + +   +    LQ+        V P  H
Sbjct: 152 GPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRH 211

Query: 307 ILESNLLKAMDSAT 320
            +  NL   ++  T
Sbjct: 212 SIVVNLGDQLEVIT 225


>1JMU-B nrPDB
          Length = 666

 Score = 29.8 bits (65), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 31/101 (30%)

Query: 88  QFDYTVTNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDI 147
            +  T  +  G    +  + S+            GQ T V   Q++A         +   
Sbjct: 344 SYKETSWDPNGKKVGFIVFQSKIPFELWTAASQIGQATVVNYVQLYAEDSSFTAQSIIAT 403

Query: 148 PFLSPTFNPQEVFIRSTNIFRNLESTRCLLAGLFQCQKEGP 188
             L+  + P+++      +   L +T    A +       P
Sbjct: 404 TSLAYNYEPEQLNKTDPEMNYYLLATFIDSAAITPTNMTQP 444


>5O5B-3 nrPDB
          Length = 238

 Score = 29.1 bits (63), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 7/86 (8%)

Query: 312 LLKAMDSATAPDKIRKLYLYAAHDVTFIPLLMTLGIFDHKWPPFAVDLTM--ELYQHLES 369
           L+        P   RK  +   H +  + L  +  +      P+  ++T           
Sbjct: 131 LVAYAPPGAQPPTSRKEAMLGTHVIWDLGLQSSCTMVV----PWISNVTYRQTTQDSFTE 186

Query: 370 KEWFVQLYYHGKEQVPRGCPDGLCPL 395
             + + ++Y  +  VP   P  +  L
Sbjct: 187 GGY-ISMFYQTRIVVPLSTPKSMSML 211


>4ZNQ-A nrPDB
          Length = 335

 Score = 29.1 bits (63), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 94  TNLAGGPKPYSPYDSQYHETTLKGGMFAGQLTKVGMQQMFAL 135
           T+L+                T KGG F   +T  G++  + +
Sbjct: 95  TSLSLWGNGAGTRLGAIKFKTNKGGEFFAHMTSWGLKTEYPM 136


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.305    0.118    0.303 

Lambda     K      H
   0.267   0.0364    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,635,686
Number of Sequences: 36641
Number of extensions: 488311
Number of successful extensions: 1325
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1267
Number of HSP's gapped (non-prelim): 43
length of query: 428
length of database: 10,336,785
effective HSP length: 100
effective length of query: 328
effective length of database: 6,672,685
effective search space: 2188640680
effective search space used: 2188640680
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 60 (27.9 bits)