BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9LVH4 (177 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5A50-A nrPDB 358 e-100 5A52-A nrPDB 237 2e-63 4RJ9-A nrPDB 209 6e-55 3JZY-A nrPDB 55 1e-08 3F01-A nrPDB 51 2e-07 5W5C-F nrPDB 51 2e-07 1RSY-A nrPDB 51 2e-07 2KI6-A nrPDB 51 3e-07 5YQ3-A nrPDB 50 4e-07 3PFQ-A nrPDB 50 6e-07 2D8K-A nrPDB 49 8e-07 1DQV-A nrPDB 49 1e-06 6ANJ-A nrPDB 49 2e-06 6ANK-A nrPDB 48 2e-06 5LOB-A nrPDB 47 3e-06 2CM5-A nrPDB 47 4e-06 3RPB-A nrPDB 47 4e-06 5H4Y-A nrPDB 47 5e-06 4LDC-A nrPDB 46 7e-06 5UE8-A nrPDB 46 8e-06 6NYT-A nrPDB 46 8e-06 4DNL-A nrPDB 46 9e-06 1RH8-A nrPDB 46 9e-06 1A25-A nrPDB 45 1e-05 5IXC-A nrPDB 44 4e-05 4NPK-A nrPDB 42 1e-04 4P42-A nrPDB 42 1e-04 1UGK-A nrPDB 42 1e-04 2UZP-A nrPDB 42 2e-04 4MJJ-A nrPDB 41 3e-04 4LCV-A nrPDB 41 3e-04 2CHD-A nrPDB 39 0.001 3N5A-A nrPDB 34 0.029 1CJY-A nrPDB 34 0.034 1RLW-A nrPDB 33 0.058 1BCI-A nrPDB 33 0.062 1DJX-A nrPDB 33 0.077 1UOW-A nrPDB 32 0.14 2DMH-A nrPDB 32 0.15 3NSJ-A nrPDB 32 0.20 1E3H-A nrPDB 31 0.26 1YPN-A nrPDB 28 1.7 3GA7-A nrPDB 27 4.4 >5A50-A nrPDB Length = 177 Score = 358 bits (920), Expect = e-100, Method: Compositional matrix adjust. Identities = 176/177 (99%), Positives = 176/177 (99%) Query: 1 MTTACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDV 60 MTTACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDV Sbjct: 1 MTTACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDV 60 Query: 61 NPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 NPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEI PYIEALRMQLDGLPSGT Sbjct: 61 NPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEISPYIEALRMQLDGLPSGT 120 Query: 121 IVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 IVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL Sbjct: 121 IVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 >5A52-A nrPDB Length = 168 Score = 237 bits (605), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 110/168 (65%), Positives = 140/168 (83%), Gaps = 3/168 (1%) Query: 13 MDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSV 72 M++L+GLLRI +KRGVNLA+RDISSSDPY+VV GKQKLKTRV+ VNPEWN+DLTLSV Sbjct: 1 MENLVGLLRIHVKRGVNLAIRDISSSDPYIVVHCGKQKLKTRVVKHSVNPEWNDDLTLSV 60 Query: 73 TDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRM--QLD-GLPSGTIVTTVKPSR 129 TD NL + LTVYD+D+ S DDKMG+AEF I P+IEA++ QL GLP+GTI+ ++PSR Sbjct: 61 TDPNLPIKLTVYDYDLLSADDKMGEAEFHIGPFIEAIKFAHQLGPGLPNGTIIKKIEPSR 120 Query: 130 RNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 +NCL+E S + GK+VQ++ LRL+HVECGEVE QL+WID+PGS+G+ Sbjct: 121 KNCLSESSHIVLNQGKIVQNMFLRLQHVECGEVELQLEWIDVPGSRGI 168 >4RJ9-A nrPDB Length = 165 Score = 209 bits (531), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 97/166 (58%), Positives = 132/166 (79%), Gaps = 1/166 (0%) Query: 12 LMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLS 71 ++ L+GL+++R+ RGVNLAVRD+ SSDPYV+V+MGKQKLKTRVI K NPEWN++LTLS Sbjct: 1 MLGHLVGLVKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLS 60 Query: 72 VTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRN 131 + D + V L VYD D F DD MG+AE +I+P +E ++M+++G+ T+V V P+R+N Sbjct: 61 IEDPAVPVRLEVYDKDTFI-DDAMGNAELDIRPLVEVVKMKIEGVADNTVVKKVVPNRQN 119 Query: 132 CLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 CLAEES + +GK+ QD+VLRLR VECGE+E QLQW+D+PGSKG+ Sbjct: 120 CLAEESTIYISEGKVKQDVVLRLRDVECGEIELQLQWVDIPGSKGV 165 >3JZY-A nrPDB Length = 510 Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 17 LGLLRIRIKRGVNL-AVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 +G L + + L A + S+PY + MG Q TR I +NP+WN + + D Sbjct: 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL 445 Query: 76 NLTVL-LTVYDHDMFSKDDKMGDAEFEI 102 VL LT++D D FS DD +G E + Sbjct: 446 YQDVLCLTLFDRDQFSPDDFLGRTEIPV 473 >3F01-A nrPDB Length = 143 Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 9/90 (10%) Query: 20 LRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L + I + L D+ +SDPYV V + K+K +T+V K +NP +NE T V S Sbjct: 36 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS 95 Query: 76 NL---TVLLTVYDHDMFSKDDKMGDAEFEI 102 L T+++ VYD D FSK D +G EF++ Sbjct: 96 ELGGKTLVMAVYDFDRFSKHDIIG--EFKV 123 >5W5C-F nrPDB Length = 282 Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 9/90 (10%) Query: 20 LRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L + I + L D+ +SDPYV V + K+K +T+V K +NP +NE T V S Sbjct: 19 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS 78 Query: 76 NL---TVLLTVYDHDMFSKDDKMGDAEFEI 102 L T+++ VYD D FSK D +G EF++ Sbjct: 79 ELGGKTLVMAVYDFDRFSKHDIIG--EFKV 106 Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 9/88 (10%) Query: 18 GLLRIRIKRGVNLAVRDISS-SDPYVVVKMGKQ-----KLKTRVINKDVNPEWNEDLTLS 71 G L + I NL D+ SDPYV + + + K KT + +NP +NE + Sbjct: 148 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE 207 Query: 72 VTDSNLT---VLLTVYDHDMFSKDDKMG 96 V + V++TV D+D K+D +G Sbjct: 208 VPFEQIQKVQVVVTVLDYDKIGKNDAIG 235 >1RSY-A nrPDB Length = 152 Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 9/90 (10%) Query: 20 LRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L + I + L D+ +SDPYV V + K+K +T+V K +NP +NE T V S Sbjct: 44 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS 103 Query: 76 NL---TVLLTVYDHDMFSKDDKMGDAEFEI 102 L T+++ VYD D FSK D +G EF++ Sbjct: 104 ELGGKTLVMAVYDFDRFSKHDIIG--EFKV 131 >2KI6-A nrPDB Length = 128 Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 9/90 (10%) Query: 20 LRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L + I + L D+ +SDPYV V + K+K +T+V K +NP +NE T V S Sbjct: 19 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYS 78 Query: 76 NL---TVLLTVYDHDMFSKDDKMGDAEFEI 102 L T+++ VYD D FSK D +G EF++ Sbjct: 79 ELGGKTLVMAVYDFDRFSKHDIIG--EFKV 106 >5YQ3-A nrPDB Length = 162 Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 15/124 (12%) Query: 17 LGLLRIRIKRGVNLAVRD-ISSSDPYVVVKMGKQKLKTRVINKDV--NPEWNEDLT---- 69 +G+L + + G L D + DPYV ++ Q K+ V +D NP WN+ L Sbjct: 3 VGILEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKWRAE 62 Query: 70 LSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSR 129 + ++ +++ V DHD FS DD +G+A +K +E G+ GT ++P++ Sbjct: 63 FPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEM------GVEKGT--AELRPTK 114 Query: 130 RNCL 133 N + Sbjct: 115 YNIV 118 >3PFQ-A nrPDB Length = 674 Score = 50.1 bits (118), Expect = 6e-07, Method: Composition-based stats. Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 8/92 (8%) Query: 19 LLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSV 72 +L + ++ NL D + SDPYV +K+ + K KT+ I +NPEWNE + Sbjct: 173 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQL 232 Query: 73 TDSNLTVLLTV--YDHDMFSKDDKMGDAEFEI 102 +S+ L+V +D D+ S++D MG F I Sbjct: 233 KESDKDRRLSVEIWDWDLTSRNDFMGSLSFGI 264 >2D8K-A nrPDB Length = 141 Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 20 LRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L ++I + L +D S +SDP+V + + K KL+T+V K++NP WNE Sbjct: 28 LTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 87 Query: 76 NLTV----LLTVYDHDMFSKDDKMGD 97 V L V D+D FS++D +G+ Sbjct: 88 EKVVQRILYLQVLDYDRFSRNDPIGE 113 >1DQV-A nrPDB Length = 296 Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L +RI + ++L +D + SDPYV + + K+K +T+V K +NP +NE SV + Sbjct: 22 LVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLA 81 Query: 76 NLT---VLLTVYDHDMFSKDDKMG 96 L + +VYD D FS+ D +G Sbjct: 82 ELAQRKLHFSVYDFDRFSRHDLIG 105 Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%) Query: 18 GLLRIRIKRGVNLAVRDISS-SDPYV---VVKMGK--QKLKTRVINKDVNPEWNEDLTLS 71 GLL + I + NL D++ SDPYV ++ G+ +K KT + +NP +NE L Sbjct: 152 GLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFD 211 Query: 72 VTD---SNLTVLLTVYDHDMFSKDDKMG 96 V N+ + + V D+D ++ +G Sbjct: 212 VAPESVENVGLSIAVVDYDCIGHNEVIG 239 >6ANJ-A nrPDB Length = 148 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%) Query: 20 LRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L +++ + L +D S +SDP+V + + K KL+T+V K++NP WNE Sbjct: 38 LTVKVMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 97 Query: 76 NLTV----LLTVYDHDMFSKDDKMGDA 98 V L V D+D FS++D +G+ Sbjct: 98 EKVVQRILYLQVLDYDRFSRNDPIGEV 124 >6ANK-A nrPDB Length = 289 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Query: 20 LRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L +++ + L +D S +SDP+V + + K KL+T+V K++NP WNE Sbjct: 38 LTVKVMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 97 Query: 76 NLTV----LLTVYDHDMFSKDDKMGD 97 V L V D+D FS++D +G+ Sbjct: 98 EKVVQRILYLQVLDYDRFSRNDPIGE 123 Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%) Query: 22 IRIKRGVNLAVRDIS-SSDPYVVVK-MGKQK----LKTRVINKDVNPEWNEDLTLSVTDS 75 + I + NL DI +SDPYV V M K K KT +++NP +NE + Sbjct: 171 VNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTE 230 Query: 76 NL---TVLLTVYDHDMFSKDDKMG 96 L T+++TV D D S++D +G Sbjct: 231 KLRETTIIITVMDKDKLSRNDVIG 254 >5LOB-A nrPDB Length = 162 Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 9/110 (8%) Query: 18 GLLRIRIKRGVNLAVRDISS-SDPYVVV----KMGKQ-KLKTRVINKDVNPEWNEDLTLS 71 G L + I R V+LA D + SDP+V + MGK+ K KT++ K +NPE+NE+ Sbjct: 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYD 96 Query: 72 VTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPS 118 + S+L ++ ++V+D+D+ +D +G + I E L+ + L + Sbjct: 97 IKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKN 146 >2CM5-A nrPDB Length = 166 Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 13/132 (9%) Query: 18 GLLRIRIKRGVNLAVRDISS-SDPYVVV----KMGKQ-KLKTRVINKDVNPEWNEDLTLS 71 G L + I R V+LA D + SDP+V + MGK+ K KT++ K +NPE+NE+ Sbjct: 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYD 96 Query: 72 VTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPS 128 + S+L ++ ++V+D+D+ +D +G + I E L+ + L + K Sbjct: 97 IKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKN----KDKKIE 152 Query: 129 RRNCLAEESRVT 140 R + L E+ V+ Sbjct: 153 RWHQLQNENHVS 164 >3RPB-A nrPDB Length = 140 Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 9/110 (8%) Query: 18 GLLRIRIKRGVNLAVRDISS-SDPYVVV----KMGKQ-KLKTRVINKDVNPEWNEDLTLS 71 G L + I R V+LA D + SDP+V + MGK+ K KT++ K +NPE+NE+ Sbjct: 15 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYD 74 Query: 72 VTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPS 118 + S+L ++ ++V+D+D+ +D +G + I E L+ + L + Sbjct: 75 IKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKN 124 >5H4Y-A nrPDB Length = 150 Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 7/87 (8%) Query: 18 GLLRIRIKRGVNLAVRDIS-SSDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVT 73 G L + I + + LA D+ SSDPYV V + +++ +T+V + +NP + E V Sbjct: 31 GQLLVGILQAMGLAALDLGGSSDPYVRVYLLPDKRRRYETKVHRQTLNPHFGETFAFKVP 90 Query: 74 DSNL---TVLLTVYDHDMFSKDDKMGD 97 L +++ VYD D FS++D +G+ Sbjct: 91 YVELGGRVLVMAVYDFDRFSRNDAIGE 117 >4LDC-A nrPDB Length = 149 Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 10/110 (9%) Query: 18 GLLRIRIKRGVNLAVRDISS-SDPYVVVKMG-----KQKLKTRVINKDVNPEWNEDLTLS 71 GLL + I R +LA D + SDPYV + K K KT V K +NPE+NE+ Sbjct: 19 GLL-VGIVRCAHLAAMDANGYSDPYVKTYLKPDVDKKSKHKTAVKKKTLNPEFNEEFCYE 77 Query: 72 VTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPS 118 + +L T+ +TV+D+D+ +D +G I E L+ D L + Sbjct: 78 IKHGDLAKKTLEVTVWDYDIGKSNDFIGGVVLGINAKGERLKHWFDCLKN 127 >5UE8-A nrPDB Length = 961 Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 32/51 (62%) Query: 37 SSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVLLTVYDHD 87 SSDPYV V++GK K +T+ I ++NP W E+ +S+ + + V+D D Sbjct: 181 SSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVWDED 231 >6NYT-A nrPDB Length = 148 Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 32/51 (62%) Query: 37 SSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVLLTVYDHD 87 SSDPYV V++GK K +T+ I ++NP W E+ +S+ + + V+D D Sbjct: 37 SSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVWDED 87 >4DNL-A nrPDB Length = 140 Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 11/104 (10%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLT--LS 71 L + ++ NL D + SDPYV +K+ + K KT+ I +NP+WNE T L Sbjct: 20 LHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLK 79 Query: 72 VTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDG 115 +D + + + ++D D +++D MG F + E ++M G Sbjct: 80 PSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVS---ELMKMPASG 120 >1RH8-A nrPDB Length = 142 Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 19/100 (19%) Query: 17 LGLLRIRIKRGVNLAVRDISS-SDPYVVVKM--------------GKQKLKTRVINKDVN 61 LG L I I + NL RD + SDP+V V + + K +T+ + K +N Sbjct: 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLN 76 Query: 62 PEWNEDLTL-SVTDSNL---TVLLTVYDHDMFSKDDKMGD 97 PEWN+ + S++ L T+ +TV+D+D FS +D +G+ Sbjct: 77 PEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGE 116 >1A25-A nrPDB Length = 149 Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%) Query: 38 SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVLLTV--YDHDMFS 90 SDPYV +K+ + K KT+ I +NPEWNE + +S+ L+V +D D+ S Sbjct: 52 SDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTS 111 Query: 91 KDDKMGDAEFEI 102 ++D MG F I Sbjct: 112 RNDFMGSLSFGI 123 >5IXC-A nrPDB Length = 814 Score = 43.5 bits (101), Expect = 4e-05, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%) Query: 20 LRIRIKRGVNLAVRDI-SSSDPYVVVKMGK---QKLKTRVINKDVNPEWNEDLTLSVTDS 75 L +R+ NL D+ S +DPYV++++ K KT+ + +P WNE + Sbjct: 28 LTVRVLEARNLRWADLLSEADPYVILQLSTAPGMKFKTKTLTDTSHPVWNEAFRFLIQSQ 87 Query: 76 NLTVL-LTVYDHDMFSKDD 93 VL L++YD D ++DD Sbjct: 88 VKNVLELSIYDEDSVTEDD 106 >4NPK-A nrPDB Length = 299 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query: 18 GLLRIRIKRGVNLAVRDI-------SSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTL 70 G+LRI +L +D SDPY ++++G Q ++RVI ++++P+WNE Sbjct: 24 GVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYEA 83 Query: 71 SVTDSNLTVL-LTVYDHDMFSKDDKMG 96 V + L + ++D D KDD +G Sbjct: 84 LVYEHPGQELEIELFDEDP-DKDDFLG 109 >4P42-A nrPDB Length = 474 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%) Query: 18 GLLRIRIKRGVNLAVRDI-------SSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTL 70 G+LRI +L +D SDPY ++++G Q ++RVI ++++P+WNE Sbjct: 197 GVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYEA 256 Query: 71 SVTDSNLTVL-LTVYDHDMFSKDDKMG 96 V + L + ++D D KDD +G Sbjct: 257 LVYEHPGQELEIELFDEDP-DKDDFLG 282 >1UGK-A nrPDB Length = 138 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 7/86 (8%) Query: 19 LLRIRIKRGVNLAVRDISSSDPYV---VVKMGKQKLKTRVINKDVNPEWNEDLTL----S 71 ++ I+ RG+ +SDPY+ ++ K K+KTRV+ K ++P ++E T Sbjct: 25 VVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPY 84 Query: 72 VTDSNLTVLLTVYDHDMFSKDDKMGD 97 L + T+ D FS+DD +G+ Sbjct: 85 TQIQELALHFTILSFDRFSRDDIIGE 110 >2UZP-A nrPDB Length = 144 Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%) Query: 38 SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVLLT--VYDHDMFS 90 SDPYV +K+ K KTR + +NP WNE ++ ++ L+ V+D D S Sbjct: 41 SDPYVKLKLIPDPRNLTKQKTRTVKATLNPVWNETFVFNLKPGDVERRLSVEVWDWDRTS 100 Query: 91 KDDKMGDAEFEIKPYIEALRMQLDG 115 ++D MG F + E L+ +DG Sbjct: 101 RNDFMGAMSFGVS---ELLKAPVDG 122 >4MJJ-A nrPDB Length = 138 Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLS-V 72 L I R L D + +DPYV + + KLKT+ +NP WNEDLT S + Sbjct: 27 LHCSILRAKGLKPMDFNGLADPYVKLHLLPGACKANKLKTKTQRNTLNPVWNEDLTYSGI 86 Query: 73 TDSNLT---VLLTVYDHDMFSKDDKMGD 97 TD ++T + + V D D S ++ +G+ Sbjct: 87 TDDDITHKVLRIAVCDEDKLSHNEFIGE 114 >4LCV-A nrPDB Length = 138 Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 10/104 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPE 63 S L D L I + L D + +DPYV + + KL+T+ + +NP Sbjct: 16 SLLYDQENNALHCTISKAKGLKPMDHNGLADPYVKLHLLPGASKANKLRTKTLRNTLNPS 75 Query: 64 WNEDLT-LSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIK 103 WNE LT +TD ++ T+ ++V D D F ++ +G+ +K Sbjct: 76 WNETLTYYGITDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLK 119 >2CHD-A nrPDB Length = 142 Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 9/75 (12%) Query: 38 SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTL-SVTDSNL---TVLLTVYDHDM 88 +DPYV + + KL+T+ + NP WNE L +T+ ++ T+ ++V D D Sbjct: 50 ADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK 109 Query: 89 FSKDDKMGDAEFEIK 103 F ++ +G+ F +K Sbjct: 110 FGHNEFIGETRFSLK 124 >3N5A-A nrPDB Length = 138 Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 9/84 (10%) Query: 22 IRIKRGVNLAVRDIS-SSDPYVVVK-MGKQK----LKTRVINKDVNPEWNEDLTLSVTDS 75 + I + NL DI +SDPYV V M K K KT +++NP +NE + Sbjct: 20 VNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTE 79 Query: 76 NL---TVLLTVYDHDMFSKDDKMG 96 L T+++TV D D S++D +G Sbjct: 80 KLRETTIIITVMDKDKLSRNDVIG 103 >1CJY-A nrPDB Length = 749 Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Query: 35 ISSSDPYV---VVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVL-LTVYDHDMFS 90 + + DPYV + + +TR N D+NP WNE + + VL +T+ D + + Sbjct: 39 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN-YV 97 Query: 91 KDDKMGDAEFEI 102 D+ +G A F + Sbjct: 98 MDETLGTATFTV 109 >1RLW-A nrPDB Length = 126 Score = 33.1 bits (74), Expect = 0.058, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Query: 35 ISSSDPYV---VVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVL-LTVYDHDMFS 90 + + DPYV + + +TR N D+NP WNE + + VL +T+ D + + Sbjct: 24 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN-YV 82 Query: 91 KDDKMGDAEFEI 102 D+ +G A F + Sbjct: 83 MDETLGTATFTV 94 >1BCI-A nrPDB Length = 138 Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%) Query: 35 ISSSDPYV---VVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVL-LTVYDHDMFS 90 + + DPYV + + +TR N D+NP WNE + + VL +T+ D + + Sbjct: 39 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN-YV 97 Query: 91 KDDKMGDAEFEI 102 D+ +G A F + Sbjct: 98 MDETLGTATFTV 109 >1DJX-A nrPDB Length = 624 Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 16/122 (13%) Query: 20 LRIRIKRGVNLAVRDISSS---DPYVVVKM---GKQ--KLKTRVI-NKDVNPEWNEDLTL 70 LR+RI G L + + + DP V+V++ G+ +T VI N NP W+ + Sbjct: 499 LRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEF 558 Query: 71 SVTDSNLT-VLLTVYDHDMFSKDDKMGDAEFEIKP------YIEALRMQLDGLPSGTIVT 123 VT +L V V D+D SK+D +G + ++ L D PS T+ Sbjct: 559 EVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNGDQHPSATLFV 618 Query: 124 TV 125 + Sbjct: 619 KI 620 >1UOW-A nrPDB Length = 159 Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 9/88 (10%) Query: 18 GLLRIRIKRGVNLAVRDISS-SDPYVVVKMGKQ-----KLKTRVINKDVNPEWNEDLTLS 71 G L + I NL D+ SDPYV + + + K KT + +NP +NE + Sbjct: 25 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFE 84 Query: 72 VTDSNLT---VLLTVYDHDMFSKDDKMG 96 V + V++TV D+D K+D +G Sbjct: 85 VPFEQIQKVQVVVTVLDYDKIGKNDAIG 112 >2DMH-A nrPDB Length = 140 Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 4/90 (4%) Query: 18 GLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSV----T 73 G+LR+ ++ N+ DP V V +K KT+ ++ ++NP WNE L + Sbjct: 7 GMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPL 66 Query: 74 DSNLTVLLTVYDHDMFSKDDKMGDAEFEIK 103 D + ++ + V D + ++ +G A +K Sbjct: 67 DFSSSLGIIVKDFETIGQNKLIGTATVALK 96 >3NSJ-A nrPDB Length = 540 Score = 31.6 bits (70), Expect = 0.20, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 36 SSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLS--VTDSNLTVLLTVYDHDMFSKDD 93 +++D Y+ V G Q+ +T V+ + NP W + + + + + + V+D D DD Sbjct: 412 TATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 471 Query: 94 KMGDAE 99 +G + Sbjct: 472 LLGSCD 477 >1E3H-A nrPDB Length = 757 Score = 31.2 bits (69), Expect = 0.26, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 5/48 (10%) Query: 87 DMFSKDDKMGDAEFEI---KPYIEALRM--QLDGLPSGTIVTTVKPSR 129 D+ +D GD +F++ K ++ AL++ +LDG+P+ + +K +R Sbjct: 525 DILGAEDAFGDMDFKVAGTKEFVTALQLDTKLDGIPASVLAAALKQAR 572 >1YPN-A nrPDB Length = 313 Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Query: 113 LDGLPSGTIVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEA 164 LD LP+G+IV T RR C E R + L ++ RL ++ GE +A Sbjct: 116 LDALPAGSIVGT-SSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDA 166 >3GA7-A nrPDB Length = 326 Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust. Identities = 13/28 (46%), Positives = 15/28 (53%) Query: 146 LVQDLVLRLRHVECGEVEAQLQWIDLPG 173 L L LR +H+ CG V A L W L G Sbjct: 175 LASALWLRDKHIRCGNVIAILLWYGLYG 202 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5A50-A nrPDB 283 3e-77 5A52-A nrPDB 242 6e-65 4RJ9-A nrPDB 228 1e-60 2CM5-A nrPDB 155 1e-38 5LOB-A nrPDB 154 2e-38 3RPB-A nrPDB 152 5e-38 4LDC-A nrPDB 142 1e-34 3PFQ-A nrPDB 120 3e-28 4DNL-A nrPDB 118 1e-27 4LCV-A nrPDB 117 2e-27 2UZP-A nrPDB 114 2e-26 1A25-A nrPDB 113 4e-26 2CHD-A nrPDB 113 4e-26 3F01-A nrPDB 112 7e-26 1RSY-A nrPDB 112 7e-26 5W5C-F nrPDB 112 8e-26 5YQ3-A nrPDB 112 9e-26 2KI6-A nrPDB 112 1e-25 5H4Y-A nrPDB 110 3e-25 3JZY-A nrPDB 110 3e-25 1DQV-A nrPDB 110 4e-25 4MJJ-A nrPDB 107 2e-24 2D8K-A nrPDB 107 2e-24 6ANK-A nrPDB 106 5e-24 6ANJ-A nrPDB 105 9e-24 1RH8-A nrPDB 100 3e-22 5UE8-A nrPDB 97 4e-21 1UGK-A nrPDB 96 6e-21 6NYT-A nrPDB 93 7e-20 4P42-A nrPDB 89 1e-18 5IXC-A nrPDB 88 3e-18 4NPK-A nrPDB 87 3e-18 Sequences not found previously or not previously below threshold: 1UOW-A nrPDB 85 2e-17 3N5A-A nrPDB 79 9e-16 3FDW-A nrPDB 77 3e-15 1W15-A nrPDB 76 8e-15 2Q3X-A nrPDB 66 9e-12 2BWQ-A nrPDB 65 2e-11 1DJX-A nrPDB 63 4e-11 4TS6-A nrPDB 63 6e-11 2DMG-A nrPDB 56 9e-09 3NSJ-A nrPDB 55 2e-08 1CJY-A nrPDB 53 7e-08 1BCI-A nrPDB 52 1e-07 1RLW-A nrPDB 52 2e-07 2DMH-A nrPDB 50 4e-07 6EI6-A nrPDB 39 0.001 5THM-A nrPDB 37 0.004 2CJT-A nrPDB 37 0.005 2CJS-A nrPDB 33 0.075 1MM8-A nrPDB 33 0.097 1B7E-A nrPDB 32 0.11 1FOU-A nrPDB 30 0.50 5EK8-A nrPDB 29 0.95 1ULJ-A nrPDB 29 1.2 3EN1-A nrPDB 29 1.2 3I0U-A nrPDB 29 1.4 1H2A-L nrPDB 28 1.8 3H7O-A nrPDB 28 2.1 5DXT-A nrPDB 28 2.3 4N9X-A nrPDB 28 2.4 2ENQ-A nrPDB 28 2.7 1JP4-A nrPDB 27 6.9 >5A50-A nrPDB Length = 177 Score = 283 bits (724), Expect = 3e-77, Method: Composition-based stats. Identities = 176/177 (99%), Positives = 176/177 (99%) Query: 1 MTTACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDV 60 MTTACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDV Sbjct: 1 MTTACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDV 60 Query: 61 NPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 NPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEI PYIEALRMQLDGLPSGT Sbjct: 61 NPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEISPYIEALRMQLDGLPSGT 120 Query: 121 IVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 IVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL Sbjct: 121 IVTTVKPSRRNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 >5A52-A nrPDB Length = 168 Score = 242 bits (618), Expect = 6e-65, Method: Composition-based stats. Identities = 108/168 (64%), Positives = 138/168 (82%), Gaps = 3/168 (1%) Query: 13 MDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSV 72 M++L+GLLRI +KRGVNLA+RDISSSDPY+VV GKQKLKTRV+ VNPEWN+DLTLSV Sbjct: 1 MENLVGLLRIHVKRGVNLAIRDISSSDPYIVVHCGKQKLKTRVVKHSVNPEWNDDLTLSV 60 Query: 73 TDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLD---GLPSGTIVTTVKPSR 129 TD NL + LTVYD+D+ S DDKMG+AEF I P+IEA++ GLP+GTI+ ++PSR Sbjct: 61 TDPNLPIKLTVYDYDLLSADDKMGEAEFHIGPFIEAIKFAHQLGPGLPNGTIIKKIEPSR 120 Query: 130 RNCLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 +NCL+E S + GK+VQ++ LRL+HVECGEVE QL+WID+PGS+G+ Sbjct: 121 KNCLSESSHIVLNQGKIVQNMFLRLQHVECGEVELQLEWIDVPGSRGI 168 >4RJ9-A nrPDB Length = 165 Score = 228 bits (581), Expect = 1e-60, Method: Composition-based stats. Identities = 97/166 (58%), Positives = 132/166 (79%), Gaps = 1/166 (0%) Query: 12 LMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLS 71 ++ L+GL+++R+ RGVNLAVRD+ SSDPYV+V+MGKQKLKTRVI K NPEWN++LTLS Sbjct: 1 MLGHLVGLVKVRVVRGVNLAVRDLRSSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLS 60 Query: 72 VTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRN 131 + D + V L VYD D F DD MG+AE +I+P +E ++M+++G+ T+V V P+R+N Sbjct: 61 IEDPAVPVRLEVYDKDTFI-DDAMGNAELDIRPLVEVVKMKIEGVADNTVVKKVVPNRQN 119 Query: 132 CLAEESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWIDLPGSKGL 177 CLAEES + +GK+ QD+VLRLR VECGE+E QLQW+D+PGSKG+ Sbjct: 120 CLAEESTIYISEGKVKQDVVLRLRDVECGEIELQLQWVDIPGSKGV 165 >2CM5-A nrPDB Length = 166 Score = 155 bits (391), Expect = 1e-38, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 13/140 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMG-----KQKLKTRVINKDVNPE 63 S + G L + I R V+LA D + SDP+V + + K K KT++ K +NPE Sbjct: 29 SLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPE 88 Query: 64 WNEDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 +NE+ + S+L ++ ++V+D+D+ +D +G + I E L+ + L + Sbjct: 89 FNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKN-- 146 Query: 121 IVTTVKPSRRNCLAEESRVT 140 K R + L E+ V+ Sbjct: 147 --KDKKIERWHQLQNENHVS 164 >5LOB-A nrPDB Length = 162 Score = 154 bits (389), Expect = 2e-38, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 13/138 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMG-----KQKLKTRVINKDVNPE 63 S + G L + I R V+LA D + SDP+V + + K K KT++ K +NPE Sbjct: 29 SLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPE 88 Query: 64 WNEDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 +NE+ + S+L ++ ++V+D+D+ +D +G + I E L+ + L + Sbjct: 89 FNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKN-- 146 Query: 121 IVTTVKPSRRNCLAEESR 138 K R + L E+ Sbjct: 147 --KDKKIERWHQLQNENH 162 >3RPB-A nrPDB Length = 140 Score = 152 bits (385), Expect = 5e-38, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 13/138 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMG-----KQKLKTRVINKDVNPE 63 S + G L + I R V+LA D + SDP+V + + K K KT++ K +NPE Sbjct: 7 SLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPE 66 Query: 64 WNEDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 +NE+ + S+L ++ ++V+D+D+ +D +G + I E L+ + L + Sbjct: 67 FNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKN-- 124 Query: 121 IVTTVKPSRRNCLAEESR 138 K R + L E+ Sbjct: 125 --KDKKIERWHQLQNENH 140 >4LDC-A nrPDB Length = 149 Score = 142 bits (357), Expect = 1e-34, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 13/136 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMG-----KQKLKTRVINKDVNPE 63 S L + I R +LA D + SDPYV + K K KT V K +NPE Sbjct: 10 SLKYSSQKQGLLVGIVRCAHLAAMDANGYSDPYVKTYLKPDVDKKSKHKTAVKKKTLNPE 69 Query: 64 WNEDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 +NE+ + +L T+ +TV+D+D+ +D +G I E L+ D L + Sbjct: 70 FNEEFCYEIKHGDLAKKTLEVTVWDYDIGKSNDFIGGVVLGINAKGERLKHWFDCLKN-- 127 Query: 121 IVTTVKPSRRNCLAEE 136 + R + L E Sbjct: 128 --KDKRIERWHTLTNE 141 >3PFQ-A nrPDB Length = 674 Score = 120 bits (301), Expect = 3e-28, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 11/105 (10%) Query: 19 LLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSV 72 +L + ++ NL D + SDPYV +K+ + K KT+ I +NPEWNE + Sbjct: 173 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQL 232 Query: 73 TDSNLTVLLTV--YDHDMFSKDDKMGDAEFEIKPYIEALRMQLDG 115 +S+ L+V +D D+ S++D MG F I E + +DG Sbjct: 233 KESDKDRRLSVEIWDWDLTSRNDFMGSLSFGIS---ELQKAGVDG 274 >4DNL-A nrPDB Length = 140 Score = 118 bits (296), Expect = 1e-27, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 11/104 (10%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSVT 73 L + ++ NL D + SDPYV +K+ + K KT+ I +NP+WNE T + Sbjct: 20 LHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLK 79 Query: 74 DSNLTVLLTV--YDHDMFSKDDKMGDAEFEIKPYIEALRMQLDG 115 S+ L+V +D D +++D MG F + E ++M G Sbjct: 80 PSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVS---ELMKMPASG 120 >4LCV-A nrPDB Length = 138 Score = 117 bits (294), Expect = 2e-27, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 10/106 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPE 63 S L D L I + L D + +DPYV + + KL+T+ + +NP Sbjct: 16 SLLYDQENNALHCTISKAKGLKPMDHNGLADPYVKLHLLPGASKANKLRTKTLRNTLNPS 75 Query: 64 WNEDLTLS-VTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPY 105 WNE LT +TD ++ T+ ++V D D F ++ +G+ +K Sbjct: 76 WNETLTYYGITDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLKKL 121 >2UZP-A nrPDB Length = 144 Score = 114 bits (285), Expect = 2e-26, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSVT 73 + + + NL D + SDPYV +K+ K KTR + +NP WNE ++ Sbjct: 22 IHVTVGEARNLIPMDPNGLSDPYVKLKLIPDPRNLTKQKTRTVKATLNPVWNETFVFNLK 81 Query: 74 DSNLTVLLT--VYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDG 115 ++ L+ V+D D S++D MG F + E L+ +DG Sbjct: 82 PGDVERRLSVEVWDWDRTSRNDFMGAMSFGVS---ELLKAPVDG 122 >1A25-A nrPDB Length = 149 Score = 113 bits (283), Expect = 4e-26, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 11/105 (10%) Query: 19 LLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSV 72 +L + ++ NL D + SDPYV +K+ + K KT+ I +NPEWNE + Sbjct: 32 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQL 91 Query: 73 TDSNLTVLLTV--YDHDMFSKDDKMGDAEFEIKPYIEALRMQLDG 115 +S+ L+V +D D+ S++D MG F I E + +DG Sbjct: 92 KESDKDRRLSVEIWDWDLTSRNDFMGSLSFGIS---ELQKAGVDG 133 >2CHD-A nrPDB Length = 142 Score = 113 bits (283), Expect = 4e-26, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%) Query: 2 TTACPARTSSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRV 55 TT S L D L+ I R L D + +DPYV + + KL+T+ Sbjct: 13 TTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKT 72 Query: 56 INKDVNPEWNEDLTL-SVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPY 105 + NP WNE L +T+ ++ T+ ++V D D F ++ +G+ F +K Sbjct: 73 LRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKL 126 >3F01-A nrPDB Length = 143 Score = 112 bits (281), Expect = 7e-26, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWN 65 S D L + I + L D+ SDPYV V + K+K +T+V K +NP +N Sbjct: 26 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 85 Query: 66 EDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIK 103 E T V S L T+++ VYD D FSK D +G+ + + Sbjct: 86 EQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMN 126 >1RSY-A nrPDB Length = 152 Score = 112 bits (281), Expect = 7e-26, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWN 65 S D L + I + L D+ SDPYV V + K+K +T+V K +NP +N Sbjct: 34 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 93 Query: 66 EDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIK 103 E T V S L T+++ VYD D FSK D +G+ + + Sbjct: 94 EQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMN 134 >5W5C-F nrPDB Length = 282 Score = 112 bits (280), Expect = 8e-26, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWN 65 S D L + I + L D+ SDPYV V + K+K +T+V K +NP +N Sbjct: 9 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 68 Query: 66 EDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIK 103 E T V S L T+++ VYD D FSK D +G+ + + Sbjct: 69 EQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMN 109 Score = 83.1 bits (204), Expect = 5e-17, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 13/139 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMGKQ-----KLKTRVINKDVNPE 63 S G L + I NL D+ SDPYV + + + K KT + +NP Sbjct: 140 SLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPY 199 Query: 64 WNEDLTLSVTDSNLT---VLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 +NE + V + V++TV D+D K+D +G LR D L + Sbjct: 200 YNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLAN-- 257 Query: 121 IVTTVKPSRRNCLAEESRV 139 ++ + L E V Sbjct: 258 --PRRPIAQWHTLQVEEEV 274 >5YQ3-A nrPDB Length = 162 Score = 112 bits (280), Expect = 9e-26, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 15/127 (11%) Query: 17 LGLLRIRIKRGVNLAVRD-ISSSDPYVVVKMGKQKLKTRVINKDV--NPEWNEDLT---- 69 +G+L + + G L D + DPYV ++ Q K+ V +D NP WN+ L Sbjct: 3 VGILEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKWRAE 62 Query: 70 LSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSR 129 + ++ +++ V DHD FS DD +G+A +K +E G+ GT ++P++ Sbjct: 63 FPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEM------GVEKGT--AELRPTK 114 Query: 130 RNCLAEE 136 N + + Sbjct: 115 YNIVDSD 121 >2KI6-A nrPDB Length = 128 Score = 112 bits (280), Expect = 1e-25, Method: Composition-based stats. Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWN 65 S D L + I + L D+ SDPYV V + K+K +T+V K +NP +N Sbjct: 9 SLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 68 Query: 66 EDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIK 103 E T V S L T+++ VYD D FSK D +G+ + + Sbjct: 69 EQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMN 109 >5H4Y-A nrPDB Length = 150 Score = 110 bits (275), Expect = 3e-25, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 7/101 (6%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISSS-DPYVVVKM---GKQKLKTRVINKDVNPEWN 65 S D G L + I + + LA D+ S DPYV V + +++ +T+V + +NP + Sbjct: 23 SLDYDFQSGQLLVGILQAMGLAALDLGGSSDPYVRVYLLPDKRRRYETKVHRQTLNPHFG 82 Query: 66 EDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIK 103 E V L +++ VYD D FS++D +G+ + Sbjct: 83 ETFAFKVPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVPMS 123 >3JZY-A nrPDB Length = 510 Score = 110 bits (275), Expect = 3e-25, Method: Composition-based stats. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Query: 17 LGLLRIRIKRGVNL-AVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 +G L + + L A + S+PY + MG Q TR I +NP+WN + + D Sbjct: 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL 445 Query: 76 NLTVL-LTVYDHDMFSKDDKMGDAEFEI 102 VL LT++D D FS DD +G E + Sbjct: 446 YQDVLCLTLFDRDQFSPDDFLGRTEIPV 473 >1DQV-A nrPDB Length = 296 Score = 110 bits (274), Expect = 4e-25, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 11/117 (9%) Query: 7 ARTSSLMDDLLG--LLRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDV 60 R S + L G L +RI + ++L +D + SDPYV + + K+K +T+V K + Sbjct: 7 GRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTL 66 Query: 61 NPEWNEDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLD 114 NP +NE SV + L + +VYD D FS+ D +G + +E D Sbjct: 67 NPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLD--NLLELAEQPPD 121 Score = 87.8 bits (216), Expect = 2e-18, Method: Composition-based stats. Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 14/141 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPE 63 S GLL + I + NL D++ SDPYV + +K KT + +NP Sbjct: 144 SLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPT 203 Query: 64 WNEDLTLSVTDSNLT---VLLTVYDHDMFSKDDKMGDAEFEIKPYIEALR-MQLDGLPSG 119 +NE L V ++ + + V D+D ++ +G + R + L + Sbjct: 204 YNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLAN- 262 Query: 120 TIVTTVKPSRRNCLAEESRVT 140 + L EE ++ Sbjct: 263 ---PRKPVEHWHQLVEEKTLS 280 >4MJJ-A nrPDB Length = 138 Score = 107 bits (268), Expect = 2e-24, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 10/105 (9%) Query: 11 SLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPEW 64 L D L I R L D + +DPYV + + KLKT+ +NP W Sbjct: 18 LLYDRASCTLHCSILRAKGLKPMDFNGLADPYVKLHLLPGACKANKLKTKTQRNTLNPVW 77 Query: 65 NEDLTLS-VTDSNLT---VLLTVYDHDMFSKDDKMGDAEFEIKPY 105 NEDLT S +TD ++T + + V D D S ++ +G+ ++ Sbjct: 78 NEDLTYSGITDDDITHKVLRIAVCDEDKLSHNEFIGEIRVPLRRL 122 >2D8K-A nrPDB Length = 141 Score = 107 bits (268), Expect = 2e-24, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 16/117 (13%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L ++I + L +D S SDP+V + + K KL+T+V K++NP WNE Sbjct: 28 LTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 87 Query: 76 NLT----VLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPS 128 + L V D+D FS++D +G+ + ++ +MQ T +KPS Sbjct: 88 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLN-KVDLTQMQ-------TFWKDLKPS 136 >6ANK-A nrPDB Length = 289 Score = 106 bits (265), Expect = 5e-24, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 16/116 (13%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L +++ + L +D S SDP+V + + K KL+T+V K++NP WNE Sbjct: 38 LTVKVMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 97 Query: 76 NLT----VLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKP 127 + L V D+D FS++D +G+ + ++ +MQ T +KP Sbjct: 98 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLN-KVDLTQMQ-------TFWKDLKP 145 Score = 78.9 bits (193), Expect = 1e-15, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMGKQKLKTRVIN-----KDVNPE 63 S + + + I + NL DI SDPYV V + + + +++NP Sbjct: 159 SLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPI 218 Query: 64 WNEDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLD 114 +NE + L T+++TV D D S++D +G K ++ D Sbjct: 219 FNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKD 272 >6ANJ-A nrPDB Length = 148 Score = 105 bits (263), Expect = 9e-24, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 16/116 (13%) Query: 20 LRIRIKRGVNLAVRDISS-SDPYVVVKM---GKQKLKTRVINKDVNPEWNEDLTLSVTDS 75 L +++ + L +D S SDP+V + + K KL+T+V K++NP WNE Sbjct: 38 LTVKVMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPY 97 Query: 76 NLT----VLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKP 127 + L V D+D FS++D +G+ + ++ +MQ T +KP Sbjct: 98 EKVVQRILYLQVLDYDRFSRNDPIGEVSIPLN-KVDLTQMQ-------TFWKDLKP 145 >1RH8-A nrPDB Length = 142 Score = 100 bits (250), Expect = 3e-22, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 19/106 (17%) Query: 17 LGLLRIRIKRGVNLAVRDISS-SDPYVVVKM--------------GKQKLKTRVINKDVN 61 LG L I I + NL RD + SDP+V V + + K +T+ + K +N Sbjct: 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLN 76 Query: 62 PEWNEDLTL-SVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIK 103 PEWN+ + S++ L T+ +TV+D+D FS +D +G+ ++ Sbjct: 77 PEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLS 122 >5UE8-A nrPDB Length = 961 Score = 97.0 bits (240), Expect = 4e-21, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 12/107 (11%) Query: 20 LRIRIKRGVNLAVRD-ISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLT 78 + I + L +D SSDPYV V++GK K +T+ I ++NP W E+ +S+ Sbjct: 163 ISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDR 222 Query: 79 VLLTVYDHD---------MFSK--DDKMGDAEFEIKPYIEALRMQLD 114 + + V+D D F + DD +G E++ + + + Sbjct: 223 IKVRVWDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYN 269 >1UGK-A nrPDB Length = 138 Score = 96.2 bits (238), Expect = 6e-21, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 9/103 (8%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRD--ISSSDPYVV---VKMGKQKLKTRVINKDVNPEW 64 S + + IK L D +SDPY+ + K K+KTRV+ K ++P + Sbjct: 14 SLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAF 73 Query: 65 NEDLTLSV----TDSNLTVLLTVYDHDMFSKDDKMGDAEFEIK 103 +E T L + T+ D FS+DD +G+ + Sbjct: 74 DETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLS 116 >6NYT-A nrPDB Length = 148 Score = 92.8 bits (229), Expect = 7e-20, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 12/107 (11%) Query: 20 LRIRIKRGVNLAVRD-ISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLT 78 + I + L +D SSDPYV V++GK K +T+ I ++NP W E+ +S+ Sbjct: 19 ISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDR 78 Query: 79 VLLTVYDHD---------MFSK--DDKMGDAEFEIKPYIEALRMQLD 114 + + V+D D F + DD +G E++ + + + Sbjct: 79 IKVRVWDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYN 125 >4P42-A nrPDB Length = 474 Score = 88.5 bits (218), Expect = 1e-18, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 9/93 (9%) Query: 18 GLLRIRIKRGVNLAVRDI-------SSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTL 70 G+LRI +L +D SDPY ++++G Q ++RVI ++++P+WNE Sbjct: 197 GVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYEA 256 Query: 71 SVTDSN-LTVLLTVYDHDMFSKDDKMGDAEFEI 102 V + + + ++D D KDD +G ++ Sbjct: 257 LVYEHPGQELEIELFDEDP-DKDDFLGSLMIDL 288 Score = 45.8 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 24/143 (16%) Query: 19 LLRIRIKRGVNLAVRDISSSDP--YVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSN 76 LL + + NL SS+P V + +G + ++++ K P W E+ T + + Sbjct: 349 LLILYLDSARNLPSGKKISSNPNPVVQMSVGHKAQESKIRYKTNEPVWEENFTFFIHNPK 408 Query: 77 -LTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNCLAE 135 + + V D +G+ + + + + S+R L+ Sbjct: 409 RQDLEVEVRDE---QHQCSLGNLKVPLSQLL--------------TSEDMTVSQRFQLSN 451 Query: 136 ESRVTWVDGKLVQDLVLRLRHVE 158 + + + LR+ H+E Sbjct: 452 SG----PNSTIKMKIALRVLHLE 470 >5IXC-A nrPDB Length = 814 Score = 87.8 bits (216), Expect = 3e-18, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 14/153 (9%) Query: 19 LLRIRIKRGVNLAVRDI-SSSDPYVVVKMG---KQKLKTRVINKDVNPEWNEDLTLSVTD 74 L +R+ NL D+ S +DPYV++++ K KT+ + +P WNE + Sbjct: 27 QLTVRVLEARNLRWADLLSEADPYVILQLSTAPGMKFKTKTLTDTSHPVWNEAFRFLIQS 86 Query: 75 SNLT-VLLTVYDHDMFSKDDKMGDAEFEIKPY--IEALRMQLDGLPSGTIVTTVKPSRRN 131 + L++YD D ++DD ++I + LR P G V+ Sbjct: 87 QVKNVLELSIYDEDSVTEDDICFKVLYDISEVLPGKLLRKTFSQSPQGEEELDVE----- 141 Query: 132 CLAEESRVTWVDGKLVQDLVLRLRHVECGEVEA 164 L EE+ + L+ + V+ R + C +V Sbjct: 142 FLMEET--SDRPENLITNKVIVARELSCLDVHL 172 >4NPK-A nrPDB Length = 299 Score = 87.0 bits (214), Expect = 3e-18, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 9/93 (9%) Query: 18 GLLRIRIKRGVNLAVRDI-------SSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTL 70 G+LRI +L +D SDPY ++++G Q ++RVI ++++P+WNE Sbjct: 24 GVLRIHFIEAQDLQGKDTYLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYEA 83 Query: 71 SVTDSN-LTVLLTVYDHDMFSKDDKMGDAEFEI 102 V + + + ++D D KDD +G ++ Sbjct: 84 LVYEHPGQELEIELFDEDP-DKDDFLGSLMIDL 115 Score = 45.0 bits (105), Expect = 2e-05, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 24/143 (16%) Query: 19 LLRIRIKRGVNLAVRDISSSDP--YVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSN 76 LL + + NL SS+P V + +G + ++++ K P W E+ T + + Sbjct: 176 LLILYLDSARNLPSGKKISSNPNPVVQMSVGHKAQESKIRYKTNEPVWEENFTFFIHNPK 235 Query: 77 -LTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNCLAE 135 + + V D +G+ + + + + S+R L+ Sbjct: 236 RQDLEVEVRDE---QHQCSLGNLKVPLSQLL--------------TSEDMTVSQRFQLSN 278 Query: 136 ESRVTWVDGKLVQDLVLRLRHVE 158 + + + LR+ H+E Sbjct: 279 SG----PNSTIKMKIALRVLHLE 297 >1UOW-A nrPDB Length = 159 Score = 84.7 bits (208), Expect = 2e-17, Method: Composition-based stats. Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 13/139 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMGKQ-----KLKTRVINKDVNPE 63 S G L + I NL D+ SDPYV + + + K KT + +NP Sbjct: 17 SLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPY 76 Query: 64 WNEDLTLSVTDSNLT---VLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 +NE + V + V++TV D+D K+D +G LR D L + Sbjct: 77 YNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLAN-- 134 Query: 121 IVTTVKPSRRNCLAEESRV 139 ++ + L E V Sbjct: 135 --PRRPIAQWHTLQVEEEV 151 >3N5A-A nrPDB Length = 138 Score = 79.3 bits (194), Expect = 9e-16, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKMGKQKLKTRVIN-----KDVNPE 63 S + + + I + NL DI SDPYV V + + + +++NP Sbjct: 8 SLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPI 67 Query: 64 WNEDLTLSVTDSNL---TVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLD 114 +NE + L T+++TV D D S++D +G K ++ D Sbjct: 68 FNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKD 121 >3FDW-A nrPDB Length = 148 Score = 77.4 bits (189), Expect = 3e-15, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 10/103 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS--SDPYVVVKM-----GKQKLKTRVINKDVNP 62 S + L + +K LA D + S+PYV + + K KT + VNP Sbjct: 15 SLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNP 74 Query: 63 EWNEDLTLSVTDS---NLTVLLTVYDHDMFSKDDKMGDAEFEI 102 ++E L + +S T+ +V+ H F ++ +G+AE ++ Sbjct: 75 LYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQM 117 >1W15-A nrPDB Length = 153 Score = 76.2 bits (186), Expect = 8e-15, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 13/135 (9%) Query: 10 SSLMDDLLGLLRIRIKRGVNLAVRDISS-SDPYVVVKM-----GKQKLKTRVINKDVNPE 63 S L + + + +L D+S SDPYV V + K KT V N Sbjct: 22 SLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAV 81 Query: 64 WNEDLTLSVT---DSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGT 120 +NE + ++V V D + S+++ +G Sbjct: 82 FNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEGSGGGHW----KEIC 137 Query: 121 IVTTVKPSRRNCLAE 135 + ++ + L + Sbjct: 138 DFPRRQIAKWHMLCD 152 >2Q3X-A nrPDB Length = 171 Score = 65.8 bits (159), Expect = 9e-12, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 10/114 (8%) Query: 2 TTACPARTSSL--MDDLLGLLRIRIKRGVNLAVRDISSSDP--YVVVKMGKQ-----KLK 52 T A PA M+D G L + + R +L + S S P YV V + + K K Sbjct: 12 TLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKK 71 Query: 53 TRVINKDVNPEWNEDLTLSVTDSNLTVLLTVY-DHDMFSKDDKMGDAEFEIKPY 105 TR+ K ++P + + L + + + V+ D+ MG A+ ++ Sbjct: 72 TRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEEL 125 >2BWQ-A nrPDB Length = 129 Score = 64.7 bits (156), Expect = 2e-11, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 44/116 (37%), Gaps = 13/116 (11%) Query: 11 SLMDDLLGLLRIRIKRGVNLAVR-DISSSDPYVVVKM-----GKQKLKTRVINKDVNPEW 64 D + L + I +L R D +PYV + K K +T+ + K + P+W Sbjct: 11 LWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKW 70 Query: 65 NEDLTLSVTD----SNLTVLLTVYDHDMFSKD--DKMGDAEFEI-KPYIEALRMQL 113 N+ S + +T++D ++ + +G+ E+ ++ Sbjct: 71 NQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDEPHWY 126 >1DJX-A nrPDB Length = 624 Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 10/111 (9%) Query: 19 LLRIRIKRGVNLAVRDISSS---DPYVVVKM-----GKQKLKTRVINKDV-NPEWNEDLT 69 LR+RI G L + + + DP V+V++ +T VI + NP W+ + Sbjct: 498 RLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFE 557 Query: 70 LSVTDSNLTV-LLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSG 119 VT +L + V D+D SK+D +G + + R +G Sbjct: 558 FEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSKNG 608 >4TS6-A nrPDB Length = 132 Score = 63.1 bits (152), Expect = 6e-11, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 10/100 (10%) Query: 13 MDDLLGLLRIRIKRGVNLAVRDIS-SSDPYVVVKM-----GKQKLKTRVINKDVNPEWNE 66 D L + + L++R +PY V + K K +T+ + P W + Sbjct: 18 YDQNTLQLIVTLVCATGLSLRQSGAGRNPYAKVFLLPDRSHKSKRRTKTVGTTCEPRWGQ 77 Query: 67 DLTLS----VTDSNLTVLLTVYDHDMFSKDDKMGDAEFEI 102 S + + +T++D+ + +D +G+ ++ Sbjct: 78 TFVYSGLRRCDLNGRLLEVTLWDYVRYGANDFIGEVVIDL 117 >2DMG-A nrPDB Length = 142 Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 18 GLLRIRIKRGVNLAVRDISSSDPYVVVKM-----GKQKLKTRVINKDVNPEWNEDLTLSV 72 L + + NL SDPYV + + + KT V K +NP +++ SV Sbjct: 24 NKLIVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSV 83 Query: 73 TDSNLTVL 80 + + Sbjct: 84 SLPEVQRR 91 >3NSJ-A nrPDB Length = 540 Score = 54.6 bits (130), Expect = 2e-08, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 2/82 (2%) Query: 20 LRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLS--VTDSNL 77 L + R +L +++D Y+ V G Q+ +T V+ + NP W + + + + Sbjct: 396 LVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGG 455 Query: 78 TVLLTVYDHDMFSKDDKMGDAE 99 + + V+D D DD +G + Sbjct: 456 PLRVQVWDADYGWDDDLLGSCD 477 >1CJY-A nrPDB Length = 749 Score = 52.7 bits (125), Expect = 7e-08, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 35 ISSSDPYVVVKMGK---QKLKTRVINKDVNPEWNEDLTLSV-TDSNLTVLLTVYDHDMFS 90 + + DPYV + + + +TR N D+NP WNE + + + +T+ D + + Sbjct: 39 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN-YV 97 Query: 91 KDDKMGDAEFEIKPY 105 D+ +G A F + Sbjct: 98 MDETLGTATFTVSSM 112 >1BCI-A nrPDB Length = 138 Score = 51.9 bits (123), Expect = 1e-07, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 35 ISSSDPYVVVKMGK---QKLKTRVINKDVNPEWNEDLTLSV-TDSNLTVLLTVYDHDMFS 90 + + DPYV + + + +TR N D+NP WNE + + + +T+ D + + Sbjct: 39 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN-YV 97 Query: 91 KDDKMGDAEFEIKPY 105 D+ +G A F + Sbjct: 98 MDETLGTATFTVSSM 112 >1RLW-A nrPDB Length = 126 Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 35 ISSSDPYVVVKMGK---QKLKTRVINKDVNPEWNEDLTLSV-TDSNLTVLLTVYDHDMFS 90 + + DPYV + + + +TR N D+NP WNE + + + +T+ D + + Sbjct: 24 LDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN-YV 82 Query: 91 KDDKMGDAEFEIKPY 105 D+ +G A F + Sbjct: 83 MDETLGTATFTVSSM 97 >2DMH-A nrPDB Length = 140 Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%) Query: 18 GLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNL 77 G+LR+ ++ N+ DP V V +K KT+ ++ ++NP WNE L + L Sbjct: 7 GMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPL 66 Query: 78 T----VLLTVYDHDMFSKDDKMGDAEFEIKPY 105 + + V D + ++ +G A +K Sbjct: 67 DFSSSLGIIVKDFETIGQNKLIGTATVALKDL 98 >6EI6-A nrPDB Length = 270 Score = 38.8 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 15/101 (14%) Query: 20 LRIRIKRGVNLAVRDISSSDPYVVVK---MGKQKLKTR--VINKDVNPEWNEDLTLSVTD 74 L I + RG++ V + D YV V+ + + KT+ VI +P+++E + + Sbjct: 120 LEIVVVRGISYNVANPKDVDTYVRVEFPLLNDESFKTKTNVIRDTSSPDYDERFKVDIQR 179 Query: 75 SNLT---------VLLTVYDHDMFSKDD-KMGDAEFEIKPY 105 +N V +Y F + D +G +++P Sbjct: 180 TNRQFQRIFKRHGVKFEIYSRGGFLRSDTLIGTVNVKLQPL 220 >5THM-A nrPDB Length = 533 Score = 36.9 bits (84), Expect = 0.004, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Query: 49 QKLKTRVINKDVNPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEA 108 ++ K+ V+ D+N W E + + + D+ K + +G+ F+I Y E Sbjct: 339 KERKSGVVIDDLNERWLELAPYLLFYRDTKTKKDMDDYSRKIKQEYIGNQRFDIGSYSEL 398 Query: 109 LRMQLDGL-PSGT 120 R+ D L +GT Sbjct: 399 QRLFTDILFKNGT 411 >2CJT-A nrPDB Length = 131 Score = 36.9 bits (84), Expect = 0.005, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Query: 14 DDLLGLLRIRIKRGV-NLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSV 72 ++ LL + +K+ + A ++ YV +K+ K T + P W +D + Sbjct: 1 GGVMSLLCVGVKKAKFDGAQEKFNT---YVTLKVQNVKSTTIAVRGS-QPSWEQDFMFEI 56 Query: 73 TDSNLTVLLTVY 84 +L + + V+ Sbjct: 57 NRLDLGLTVEVW 68 >2CJS-A nrPDB Length = 167 Score = 33.1 bits (74), Expect = 0.075, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Query: 41 YVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVLLTVY 84 YV +K+ + T + P W +D + +L + + V+ Sbjct: 35 YVTLKVQNVESTTIAVRGS-QPSWEQDFMFEINRLDLGLTVEVW 77 >1MM8-A nrPDB Length = 481 Score = 32.7 bits (73), Expect = 0.097, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 11/106 (10%) Query: 65 NEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTT 124 NE + V +Y +D ++G + I G+ Sbjct: 208 NERFVVRSKHPRKDVESGLYLYDHLKNQPELGGYQISI---------PQKGVVDKRGKRK 258 Query: 125 VKPSRRNCLA-EESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWI 169 +P+R+ L+ R+T G + + VL + + E L+W+ Sbjct: 259 NRPARKASLSLRSGRITLKQGNITLNAVLA-EEINPPKGETPLKWL 303 >1B7E-A nrPDB Length = 420 Score = 32.3 bits (72), Expect = 0.11, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 11/106 (10%) Query: 65 NEDLTLSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTT 124 NE + V +Y +D ++G + I G+ Sbjct: 149 NERFVVRSKHPRKDVESGLYLYDHLKNQPELGGYQISI---------PQKGVVDKRGKRK 199 Query: 125 VKPSRRNCLA-EESRVTWVDGKLVQDLVLRLRHVECGEVEAQLQWI 169 +P+R+ L+ R+T G + + VL + + E L+W+ Sbjct: 200 NRPARKASLSLRSGRITLKQGNITLNAVLA-EEINPPKGETPLKWL 244 >1FOU-A nrPDB Length = 309 Score = 30.4 bits (67), Expect = 0.50, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 10/54 (18%) Query: 40 PYVVVKMGKQKLKTRVINKDVNPEWNEDLTLSVTDSNLTVLLTVYDHDMFSKDD 93 PYVV K+ QK N WNE +T + + D S +D Sbjct: 204 PYVVDKLNAQK----------NAVWNEMMTFKLQTNANLEKKERMVTDEVSSND 247 >5EK8-A nrPDB Length = 668 Score = 29.2 bits (64), Expect = 0.95, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 40/96 (41%), Gaps = 16/96 (16%) Query: 8 RTSSLMDDLLGLLRIRIKRGVNLAVRDISSSDPYVVVKMGKQKLKTRVINKDVNP--EWN 65 +T ++ D++ L +++ L + +++ +K ++ P + N Sbjct: 4 KTKTIFDEIKAALVLKVIDS-PLGRK---------LIEEKAEKQVSKTQEAITKPIEQLN 53 Query: 66 E---DLTLSVTDSNL-TVLLTVYDHDMFSKDDKMGD 97 + L S T+ L + L V+D D+ + D +G Sbjct: 54 KATGQLLFSDTNKPLHNIELEVWDRDVGTPSDYLGK 89 >1ULJ-A nrPDB Length = 460 Score = 28.8 bits (63), Expect = 1.2, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 74 DSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNCL 133 ++ ++ +D D D +G+A+F + ++ + +P I V P Sbjct: 157 ETYKGLIFANWDADAPDLDTYLGEAKFYMDHMLDRTEAGTEAIPG--IQKWVIPCNWKFA 214 Query: 134 AEE 136 AE+ Sbjct: 215 AEQ 217 >3EN1-A nrPDB Length = 450 Score = 28.8 bits (63), Expect = 1.2, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 74 DSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNCL 133 ++ ++ +D + D +G+A+F + ++ + +P + V P Sbjct: 155 ETYKGLIFANWDENAVDLDTYLGEAKFYMDHMLDRTEAGTEAIPG--VQKWVIPCNWKFA 212 Query: 134 AEE 136 AE+ Sbjct: 213 AEQ 215 >3I0U-A nrPDB Length = 218 Score = 28.8 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 6/77 (7%) Query: 70 LSVTDSNLTVLLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSR 129 + + + V + + SK D +GD +F I E + + L + Sbjct: 53 FQIVNHSGDVFIHACRENPQSKGDFVGD-KFHISIAREQVPLAFQILSGLLFSEDSPIDK 111 Query: 130 R-----NCLAEESRVTW 141 N ++++SRV Sbjct: 112 WKITDMNRVSQQSRVGI 128 >1H2A-L nrPDB Length = 567 Score = 28.4 bits (62), Expect = 1.8, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 4/85 (4%) Query: 64 WNEDLTL--SVTDSNLTVLLTVY-DHDMFS-KDDKMGDAEFEIKPYIEALRMQLDGLPSG 119 W E V +L V+ Y D + D+ + EF Y R G+ Sbjct: 262 WKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGVVFK 321 Query: 120 TIVTTVKPSRRNCLAEESRVTWVDG 144 +KP + + E R +W +G Sbjct: 322 RDFKNIKPFDKMQIEEHVRHSWYEG 346 >3H7O-A nrPDB Length = 228 Score = 28.1 bits (61), Expect = 2.1, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%) Query: 26 RGVNLAVRDISSSDPYVV-VKMGKQKLKT 53 NL D SDPYV V + + +T Sbjct: 58 ESTNL-WEDPGKSDPYVSHVYLSFYRQET 85 >5DXT-A nrPDB Length = 962 Score = 28.1 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 9/76 (11%) Query: 16 LLGLLRIRIKRG--VNLAVRDISSSDPYVV--VKMGKQKLKTRVINKDV---NPEWNEDL 68 + LRI+I VN+ +RDI YV + G + L V + V NP WNE L Sbjct: 224 INSALRIKILCATYVNVNIRDIDKI--YVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWL 281 Query: 69 TLSVTDSNLTVLLTVY 84 + +L + Sbjct: 282 NYDIYIPDLPRAARLC 297 >4N9X-A nrPDB Length = 411 Score = 28.1 bits (61), Expect = 2.4, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 1/34 (2%) Query: 80 LLTVYDHDMFSKDDKMGDAEFEIKPYIEALRMQL 113 + V+D D F K G+ EF + + Sbjct: 80 DMQVWDKDSFGKISFSGE-EFGFSHLGHIIENPV 112 >2ENQ-A nrPDB Length = 158 Score = 27.7 bits (60), Expect = 2.7, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 9/72 (12%) Query: 20 LRIRIKRG--VNLAVRDISSSDPYVV--VKMGKQKLKTRVINKDV---NPEWNEDLTLSV 72 LRI+I VN+ +RDI YV + G + L V + V NP WNE L + Sbjct: 11 LRIKILCATYVNVNIRDIDKI--YVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDI 68 Query: 73 TDSNLTVLLTVY 84 +L + Sbjct: 69 YIPDLPRAARLC 80 >1JP4-A nrPDB Length = 308 Score = 26.5 bits (57), Expect = 6.9, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 88 MFSKDDKMGDAEFEIKPYIEALRMQLDGLPSGTIVTTVKPSRRNCLAEESRVTWVD 143 F K +G+ + P E + ++ S I+ PS+ + + EE V WVD Sbjct: 65 KFPKLTIIGEEDL---PPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVD 117 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.139 0.396 Lambda K H 0.267 0.0432 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,718,246 Number of Sequences: 36641 Number of extensions: 243433 Number of successful extensions: 848 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 630 Number of HSP's gapped (non-prelim): 116 length of query: 177 length of database: 10,336,785 effective HSP length: 91 effective length of query: 86 effective length of database: 7,002,454 effective search space: 602211044 effective search space used: 602211044 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 56 (26.1 bits)