BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9LV91 (576 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5CPT-A nrPDB 1098 0.0 1X1N-A nrPDB 825 0.0 2OWC-A nrPDB 377 e-105 2X1I-A nrPDB 374 e-104 1TZ7-A nrPDB 373 e-103 4S3P-A nrPDB 91 2e-18 5B68-A nrPDB 45 6e-05 3D2L-A nrPDB 31 1.2 1F1Z-A nrPDB 28 9.9 >5CPT-A nrPDB Length = 564 Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 532/533 (99%), Positives = 532/533 (99%) Query: 44 FRMEVVSSNSTCLSSISVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLG 103 F MEVVSSNSTCLSSISVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLG Sbjct: 32 FTMEVVSSNSTCLSSISVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLG 91 Query: 104 EEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDANCGNTLLISLDELVKDGLLIKD 163 EEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDANCGNTLLISLDELVKDGLLIKD Sbjct: 92 EEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDANCGNTLLISLDELVKDGLLIKD 151 Query: 164 ELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAY 223 ELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAY Sbjct: 152 ELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAY 211 Query: 224 FAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYA 283 FAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYA Sbjct: 212 FAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYA 271 Query: 284 RRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLY 343 RRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLY Sbjct: 272 RRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLY 331 Query: 344 DWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKS 403 DWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKS Sbjct: 332 DWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKS 391 Query: 404 LFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEV 463 LFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEV Sbjct: 392 LFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEV 451 Query: 464 NQVVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIP 523 NQVVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIP Sbjct: 452 NQVVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIP 511 Query: 524 MQDILGLGSSARMNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL 576 MQDILGLGSSARMNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL Sbjct: 512 MQDILGLGSSARMNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL 564 >1X1N-A nrPDB Length = 524 Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/521 (74%), Positives = 449/521 (86%), Gaps = 4/521 (0%) Query: 60 SVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCS 119 +VGEDFP +Y WLP DP RRRAG+LLHPTSF GP+GIGDLG +AF+F+DWLH GCS Sbjct: 4 AVGEDFPIDYADWLPKRDPNDRRRAGILLHPTSFPGPYGIGDLGPQAFKFLDWLHLAGCS 63 Query: 120 VWQVLPLVPP----DEGGSPYAGQDANCGNTLLISLDELVKDGLLIKDELPQPIDADSVN 175 +WQVLPLVPP +E GSPY+GQDANCGNTLLISL+ELV DGLL +ELP+P+ D VN Sbjct: 64 LWQVLPLVPPGKRGNEDGSPYSGQDANCGNTLLISLEELVDDGLLKMEELPEPLPTDRVN 123 Query: 176 YQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYS 235 Y T +++K PLITKAAKRL+ GELK +L +FR DP+IS WLEDAAYFAAIDN++N S Sbjct: 124 YSTISEIKDPLITKAAKRLLSSEGELKDQLENFRRDPNISSWLEDAAYFAAIDNSVNTIS 183 Query: 236 WFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMP 295 W++WPEPLKNRHL+ALE +Y+S+K+FID+FIA+QFLFQRQW+KVR+YAR +G+ IMGDMP Sbjct: 184 WYDWPEPLKNRHLAALEEVYQSEKDFIDIFIAQQFLFQRQWKKVRDYARSKGISIMGDMP 243 Query: 296 IYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSW 355 IYVGYHSADVWANKK FLLN+KGFPL+VSGVPPD FSETGQLWGSPLYDWKAME D +SW Sbjct: 244 IYVGYHSADVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSW 303 Query: 356 WVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKI 415 WV RI+RA DL+DE RIDHFRGFAGFWAVPSE K+A++GRWKVGPGK LFDAI + VGKI Sbjct: 304 WVRRIQRATDLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKVGPGKPLFDAILQAVGKI 363 Query: 416 KIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDND 475 IIAEDLGVIT+DVV+LRKSI APGMAVLQFAFG A+NPHLPHNHE NQVVY+GTHDND Sbjct: 364 NIIAEDLGVITEDVVQLRKSIEAPGMAVLQFAFGSDAENPHLPHNHEQNQVVYTGTHDND 423 Query: 476 TIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSAR 535 TIRGWWDTL QEEKS +KYLS E++IS +I+ A SS A+ AIIPMQD+LGLGS +R Sbjct: 424 TIRGWWDTLPQEEKSNVLKYLSNIEEEEISRGLIEGAVSSVARIAIIPMQDVLGLGSDSR 483 Query: 536 MNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL 576 MN PAT+ GNW WRIPSSTSFDNL+ E+ +LRD+L+ YGRL Sbjct: 484 MNIPATQFGNWSWRIPSSTSFDNLDAEAKKLRDILATYGRL 524 >2OWC-A nrPDB Length = 503 Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust. Identities = 200/479 (41%), Positives = 276/479 (57%), Gaps = 16/479 (3%) Query: 82 RRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDA 141 R G+LLHPTS GP+G+G LG+EA F+ +L G WQVLPL P G SPY A Sbjct: 8 RAFGLLLHPTSLPGPYGVGVLGQEARDFLRFLKEAGGRYWQVLPLGPTGYGDSPYQSFSA 67 Query: 142 NCGNTLLISLDELVKDGLLIKDE--LPQPIDADSVNYQTANKLKSPLITKAAKRLID-GN 198 GN LI L L + G + ++ PQ V+Y K P + +A + + + Sbjct: 68 FAGNPYLIDLRPLAERGYVRLEDPGFPQ----GRVDYGLLYAWKWPALKEAFRGFKEKAS 123 Query: 199 GELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQ 258 E + FR + WLED A F A+ W WP PL+ R AL + Sbjct: 124 PEEREAFAAFREREA--WWLEDYALFMALKGAHGGLPWNRWPLPLRKREEKALREAKSAL 181 Query: 259 KEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKG 318 E + Q+LF RQW ++ A G+ I+GDMPI+V SA+VWA+ + F L+++G Sbjct: 182 AEEVAFHAFTQWLFFRQWGALKAEAEALGIRIIGDMPIFVAEDSAEVWAHPEWFHLDEEG 241 Query: 319 FPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGF 378 P +V+GVPPD FSETGQ WG+PLY W +E + +S+W+ R+ +A +L+ RIDHFRGF Sbjct: 242 RPTVVAGVPPDYFSETGQRWGNPLYRWDVLEREGFSFWIRRLEKALELFHLVRIDHFRGF 301 Query: 379 AGFWAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGA 438 +W +P+ A+ GRW PG+ LF I + G++ ++AEDLGVIT +V LR G Sbjct: 302 EAYWEIPASCPTAVEGRWVKAPGEKLFQKIQEVFGEVPVLAEDLGVITPEVEALRDRFGL 361 Query: 439 PGMAVLQFAFGGGADNPHLPHNHEVNQ--VVYSGTHDNDTIRGWWDTLDQEEKSKAMKYL 496 PGM VLQFAF G +NP LPHN+ + VVY+GTHDNDT GW+ T EK+ +YL Sbjct: 362 PGMKVLQFAFDDGMENPFLPHNYPAHGRVVVYTGTHDNDTTLGWYRTATPHEKAFMARYL 421 Query: 497 SIAG-----EDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSARMNTPATEVGNWGWRI 550 + G E+++ W+++ S A+ A+ P+QD+L LGS ARMN P GNW WR+ Sbjct: 422 ADWGITFREEEEVPWALMHLGMKSVARLAVYPVQDVLALGSEARMNYPGRPSGNWAWRL 480 >2X1I-A nrPDB Length = 500 Score = 374 bits (960), Expect = e-104, Method: Compositional matrix adjust. Identities = 207/500 (41%), Positives = 282/500 (56%), Gaps = 15/500 (3%) Query: 85 GVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDANCG 144 G+LLHPTS GP G+G LGEEA F+ +L G WQVLPL P G SPY A G Sbjct: 8 GLLLHPTSLPGPWGVGVLGEEARGFLRFLKEAGARYWQVLPLGPTGYGDSPYQSFSAFAG 67 Query: 145 NTLLISLDELVKDGLLIKDELPQPIDADSVNYQTANKLKSPLITKAAKRLID-GNGELKS 203 N LI L LV G + ++ P V+Y K P + A + + E K Sbjct: 68 NPYLIDLRPLVDRGFVRLEDPGFP--EGRVDYGLLYAWKWPALRAAFQGFRQKASPEEKE 125 Query: 204 KLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEFID 263 F+ + + WL D A F + + W WP L+ R AL+ S E I Sbjct: 126 DFARFQEEEA--WWLRDYALFMTLKSHHGGLPWNAWPLALRTREERALKEAEASLAEEIA 183 Query: 264 LFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLV 323 Q+LF RQW ++E A G+ +GDMPI+V SA+VWA+ + F L+++G P +V Sbjct: 184 FHAFTQWLFFRQWGALKEEAEALGIAFIGDMPIFVAEDSAEVWAHPEWFHLDEEGRPTVV 243 Query: 324 SGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWA 383 +GVPPD FSETGQ WG+PLY W+ +E + +S+W+ R+R+A +L+ RIDHFRGF +W Sbjct: 244 AGVPPDYFSETGQRWGNPLYRWEVLEEEGFSFWIARLRKALELFHLVRIDHFRGFEAYWE 303 Query: 384 VPSEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAV 443 +P+ A+ GRW PG+ LF I + G+I I+AEDLGVIT +V LR G PGM V Sbjct: 304 IPASCPTAVEGRWVKAPGEKLFARIQEAFGRIPILAEDLGVITPEVEALRDRFGLPGMKV 363 Query: 444 LQFAFGGGADNPHLPHNHEVNQ--VVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAG- 500 LQFAF G +NP LPHN+ + VVY+GTHDNDT GW+ T E+ +YL+ G Sbjct: 364 LQFAFDNGMENPFLPHNYPEHGRVVVYTGTHDNDTTLGWYRTATPHERDFLKRYLADWGI 423 Query: 501 ----EDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSARMNTPATEVGNWGWRIPSSTSF 556 E ++ W++++ +S A+ A+ P+QD+L LGS ARMN P GNW WR+ Sbjct: 424 TFREEAEVPWALMRLGMASRARLAVYPVQDVLALGSEARMNYPGRPSGNWAWRLRPG--- 480 Query: 557 DNLETESDRLRDLLSLYGRL 576 + E +RL L GR+ Sbjct: 481 EIKEEHGERLLSLAEATGRV 500 >1TZ7-A nrPDB Length = 505 Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust. Identities = 207/504 (41%), Positives = 293/504 (58%), Gaps = 18/504 (3%) Query: 75 VPDPESRRRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSVWQVLPLVPP--DEG 132 VP R AG+LLH TS P+GIGDLG+EA+RF+D+L G S+WQVLPL P + G Sbjct: 15 VPRGSHMRLAGILLHVTSLPSPYGIGDLGKEAYRFLDFLKECGFSLWQVLPLNPTSLEAG 74 Query: 133 GSPYAGQDANCGNTLLISLDELVKDGLLIKDELPQPIDADSVNYQTANKLKSPLITKAAK 192 SPY+ GN +LI +EL+++ L+ + +L + +++ Y+ + K L+ KA K Sbjct: 75 NSPYSSNSLFAGNYVLIDPEELLEEDLIKERDLKRFPLGEAL-YEVVYEYKKELLEKAFK 133 Query: 193 RLIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALE 252 N L DF + S WL D A + AI W+EW E LK R AL+ Sbjct: 134 -----NFRRFELLEDFLKEHS--YWLRDYALYMAIKEE-EGKEWYEWDEELKRREKEALK 185 Query: 253 AIYESQKEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKHF 312 + K + QF+F +QW+K+R YAR +G+ I+GD+P+Y Y SADVW N + F Sbjct: 186 RVLNKLKGRFYFHVFVQFVFFKQWEKLRRYARERGISIVGDLPMYPSYSSADVWTNPELF 245 Query: 313 LLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRI 372 L+ PL V+GVPPD FS+TGQLWG+P+Y+W+ E + + WW+ R+ L+D R+ Sbjct: 246 KLDGDLKPLFVAGVPPDFFSKTGQLWGNPVYNWEEHEKEGFRWWIRRVLHNLKLFDFLRL 305 Query: 373 DHFRGFAGFWAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVEL 432 DHFRGF +W VP + A+ GRW PGK+LF + K IAEDLG IT +V L Sbjct: 306 DHFRGFEAYWEVPYGEETAVNGRWVKAPGKTLFKKLLSYFPKNPFIAEDLGFITDEVRYL 365 Query: 433 RKSIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDNDTIRGWWDTLDQEEKSKA 492 R++ PG V++FAF ++ HLPHN E N V Y+ THD IRGW++ L +E + + Sbjct: 366 RETFKIPGSRVIEFAF-YDKESEHLPHNVEENNVYYTSTHDLPPIRGWFENLGEESRKRL 424 Query: 493 MKYLSIA-GEDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSARMNTPATEVGNWGWRIP 551 +YL E+ ++ +I+ S A+ AII MQD+L LG+ ARMN P GNW WRI Sbjct: 425 FEYLGREIKEEKVNEELIRLVLISRAKFAIIQMQDLLNLGNEARMNYPGRPFGNWRWRIK 484 Query: 552 SSTSFDNLETESDRLRDLLSLYGR 575 + + + ++ LL +YGR Sbjct: 485 EDYT-----QKKEFIKKLLGIYGR 503 >4S3P-A nrPDB Length = 696 Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 96/415 (23%), Positives = 160/415 (38%), Gaps = 41/415 (9%) Query: 98 GIGDLGEEAFRFIDWLHSTGCSVW--QVLPLVPPD-EGGSPYAGQDANCGNTLLISLDEL 154 GIGD G+ +D G + + L P + E SPY+ N + I ++ Sbjct: 160 GIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA- 218 Query: 155 VKDGLL------------IKDELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGELK 202 V+D L + L Q DAD V+Y T LK + A K + E Sbjct: 219 VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQM 278 Query: 203 SKLLDFRNDPSISCWLE---DAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQK 259 + F + S + + DA + + + W WPE +N + E + Sbjct: 279 AAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEHR 338 Query: 260 EFIDLFIAKQFLFQRQWQKVREYAR--RQGVDIMGDMPIYVGYHSADVWANKKHFLLNKK 317 + +D ++ Q+L Q+ E ++ + + D+ + V A+ W +++ + L Sbjct: 339 DDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKAS 398 Query: 318 GFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRG 377 G PPD+ GQ WG P D + + Y ++ +R RIDH Sbjct: 399 ------VGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVMS 452 Query: 378 FAGFWAVPSEAKVAMVGRWKVGPGKSLFD--AISKGVGKIKIIAEDLGVITKDVVELRKS 435 W +P + A G + P L A+ + +I EDLG + ++V +S Sbjct: 453 MLRLWWIPY-GETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGKLRS 511 Query: 436 IGAPGMAVLQFAFGGGADNPH-----LPHNHEVNQVVYSGTHDNDTIRGWWDTLD 485 G VL F +N H P + + + THD T+RG+W+ D Sbjct: 512 SGVYSYKVLYF------ENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWECGD 560 >5B68-A nrPDB Length = 714 Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 113/307 (36%), Gaps = 31/307 (10%) Query: 245 NRHLSALEAIYESQ---KEFIDLFIAKQFLFQRQWQKVREYARRQG--VDIMGDMPIYVG 299 +R + E+++ ++ E ++ Q+L Q ++ A G + IM D+ + V Sbjct: 333 DRETAQSESVHGTEPDRDELTMFYMWLQWLCDEQLAAAQKRAVDAGMSIGIMADLAVGVH 392 Query: 300 YHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNR 359 AD N H L P G PPD +++ GQ W P + + + Y W N Sbjct: 393 PGGADA-QNLSHVLA-----PDASVGAPPDGYNQQGQDWSQPPWHPVRLAEEGYIPWRNL 446 Query: 360 IRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKSLFD--AISKGVGKIKI 417 +R R+DH G + +P A G + +L A+ + + Sbjct: 447 LRTVLRHSGGIRVDHVLGLFRLFVMPRMQSPA-TGTYIRFDHNALVGILALEAELAGAVV 505 Query: 418 IAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDNDTI 477 I EDLG V + G G ++L F P + + THD Sbjct: 506 IGEDLGTFEPWVQDALAQRGIMGTSILWFEHSPSQPGPRRQEEYRPLALTTVTTHDLPPT 565 Query: 478 RGWWDTLDQEEKSKAMKYLSIAGED-------DISWS--VIQAAFSSTAQTAIIPMQDIL 528 G+ + E + L + D D+ W ++ A S+ A +P ++ + Sbjct: 566 AGYLEG----EHIALRERLGVLNTDPAAELAEDLQWQAEILDVAASANA----LPAREYV 617 Query: 529 GLGSSAR 535 GL R Sbjct: 618 GLERDQR 624 >3D2L-A nrPDB Length = 243 Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 15/92 (16%) Query: 164 ELPQPIDA-----DSVNY-QTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCW 217 ELP+P+DA DS+NY QT +K +A RL+ G+L L D + + Sbjct: 92 ELPEPVDAITILCDSLNYLQTEADVKQTF--DSAARLLTDGGKL---LFDVHSPYKMETL 146 Query: 218 LEDAAYFAAIDNTLNAYSWFEWP--EPLKNRH 247 Y A ++Y WF P EPL H Sbjct: 147 FNGKTY--ATHAEQSSYIWFADPGEEPLSVVH 176 >1F1Z-A nrPDB Length = 273 Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 62 GEDFPSEYEQWLPVPD-PESRRRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSV 120 G+ +Y WL V + P S R + H T R H + DL F ++W S+ + Sbjct: 22 GQGHGKDYIPWLTVQEVPSSGRSHRIYSHKTG-RVHHLLSDLELAVFLSLEW-ESSVLDI 79 Query: 121 WQVLPLVPPD 130 + PL+P D Sbjct: 80 REQFPLLPSD 89 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5CPT-A nrPDB 850 0.0 1X1N-A nrPDB 774 0.0 2X1I-A nrPDB 679 0.0 2OWC-A nrPDB 666 0.0 1TZ7-A nrPDB 634 0.0 4S3P-A nrPDB 473 e-134 5B68-A nrPDB 347 7e-96 Sequences not found previously or not previously below threshold: 6D8K-A nrPDB 37 0.028 4TQT-A nrPDB 34 0.16 1S7T-A nrPDB 34 0.24 5GUW-M nrPDB 34 0.24 1BII-A nrPDB 33 0.47 3H3A-A nrPDB 32 0.96 2RC9-A nrPDB 32 0.98 6BJW-A nrPDB 32 1.0 4FLN-A nrPDB 31 1.4 3GZY-B nrPDB 31 1.5 5OQI-A nrPDB 30 2.2 3WEN-A nrPDB 30 3.7 2V3G-A nrPDB 29 5.7 3H6E-A nrPDB 29 6.6 CONVERGED! >5CPT-A nrPDB Length = 564 Score = 850 bits (2197), Expect = 0.0, Method: Composition-based stats. Identities = 532/533 (99%), Positives = 532/533 (99%) Query: 44 FRMEVVSSNSTCLSSISVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLG 103 F MEVVSSNSTCLSSISVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLG Sbjct: 32 FTMEVVSSNSTCLSSISVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLG 91 Query: 104 EEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDANCGNTLLISLDELVKDGLLIKD 163 EEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDANCGNTLLISLDELVKDGLLIKD Sbjct: 92 EEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDANCGNTLLISLDELVKDGLLIKD 151 Query: 164 ELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAY 223 ELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAY Sbjct: 152 ELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAY 211 Query: 224 FAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYA 283 FAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYA Sbjct: 212 FAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYA 271 Query: 284 RRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLY 343 RRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLY Sbjct: 272 RRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLY 331 Query: 344 DWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKS 403 DWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKS Sbjct: 332 DWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKS 391 Query: 404 LFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEV 463 LFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEV Sbjct: 392 LFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEV 451 Query: 464 NQVVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIP 523 NQVVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIP Sbjct: 452 NQVVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIP 511 Query: 524 MQDILGLGSSARMNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL 576 MQDILGLGSSARMNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL Sbjct: 512 MQDILGLGSSARMNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL 564 >1X1N-A nrPDB Length = 524 Score = 774 bits (1999), Expect = 0.0, Method: Composition-based stats. Identities = 386/521 (74%), Positives = 449/521 (86%), Gaps = 4/521 (0%) Query: 60 SVGEDFPSEYEQWLPVPDPESRRRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCS 119 +VGEDFP +Y WLP DP RRRAG+LLHPTSF GP+GIGDLG +AF+F+DWLH GCS Sbjct: 4 AVGEDFPIDYADWLPKRDPNDRRRAGILLHPTSFPGPYGIGDLGPQAFKFLDWLHLAGCS 63 Query: 120 VWQVLPLVPP----DEGGSPYAGQDANCGNTLLISLDELVKDGLLIKDELPQPIDADSVN 175 +WQVLPLVPP +E GSPY+GQDANCGNTLLISL+ELV DGLL +ELP+P+ D VN Sbjct: 64 LWQVLPLVPPGKRGNEDGSPYSGQDANCGNTLLISLEELVDDGLLKMEELPEPLPTDRVN 123 Query: 176 YQTANKLKSPLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYS 235 Y T +++K PLITKAAKRL+ GELK +L +FR DP+IS WLEDAAYFAAIDN++N S Sbjct: 124 YSTISEIKDPLITKAAKRLLSSEGELKDQLENFRRDPNISSWLEDAAYFAAIDNSVNTIS 183 Query: 236 WFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMP 295 W++WPEPLKNRHL+ALE +Y+S+K+FID+FIA+QFLFQRQW+KVR+YAR +G+ IMGDMP Sbjct: 184 WYDWPEPLKNRHLAALEEVYQSEKDFIDIFIAQQFLFQRQWKKVRDYARSKGISIMGDMP 243 Query: 296 IYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSW 355 IYVGYHSADVWANKK FLLN+KGFPL+VSGVPPD FSETGQLWGSPLYDWKAME D +SW Sbjct: 244 IYVGYHSADVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSW 303 Query: 356 WVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKI 415 WV RI+RA DL+DE RIDHFRGFAGFWAVPSE K+A++GRWKVGPGK LFDAI + VGKI Sbjct: 304 WVRRIQRATDLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKVGPGKPLFDAILQAVGKI 363 Query: 416 KIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDND 475 IIAEDLGVIT+DVV+LRKSI APGMAVLQFAFG A+NPHLPHNHE NQVVY+GTHDND Sbjct: 364 NIIAEDLGVITEDVVQLRKSIEAPGMAVLQFAFGSDAENPHLPHNHEQNQVVYTGTHDND 423 Query: 476 TIRGWWDTLDQEEKSKAMKYLSIAGEDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSAR 535 TIRGWWDTL QEEKS +KYLS E++IS +I+ A SS A+ AIIPMQD+LGLGS +R Sbjct: 424 TIRGWWDTLPQEEKSNVLKYLSNIEEEEISRGLIEGAVSSVARIAIIPMQDVLGLGSDSR 483 Query: 536 MNTPATEVGNWGWRIPSSTSFDNLETESDRLRDLLSLYGRL 576 MN PAT+ GNW WRIPSSTSFDNL+ E+ +LRD+L+ YGRL Sbjct: 484 MNIPATQFGNWSWRIPSSTSFDNLDAEAKKLRDILATYGRL 524 >2X1I-A nrPDB Length = 500 Score = 679 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 207/502 (41%), Positives = 282/502 (56%), Gaps = 15/502 (2%) Query: 83 RAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDAN 142 G+LLHPTS GP G+G LGEEA F+ +L G WQVLPL P G SPY A Sbjct: 6 AYGLLLHPTSLPGPWGVGVLGEEARGFLRFLKEAGARYWQVLPLGPTGYGDSPYQSFSAF 65 Query: 143 CGNTLLISLDELVKDGLLIKDELPQPIDADSVNYQTANKLKSPLITKAAKRLID-GNGEL 201 GN LI L LV G + ++ P V+Y K P + A + + E Sbjct: 66 AGNPYLIDLRPLVDRGFVRLEDPGFP--EGRVDYGLLYAWKWPALRAAFQGFRQKASPEE 123 Query: 202 KSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKEF 261 K F+ + + WL D A F + + W WP L+ R AL+ S E Sbjct: 124 KEDFARFQEEEA--WWLRDYALFMTLKSHHGGLPWNAWPLALRTREERALKEAEASLAEE 181 Query: 262 IDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPL 321 I Q+LF RQW ++E A G+ +GDMPI+V SA+VWA+ + F L+++G P Sbjct: 182 IAFHAFTQWLFFRQWGALKEEAEALGIAFIGDMPIFVAEDSAEVWAHPEWFHLDEEGRPT 241 Query: 322 LVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGF 381 +V+GVPPD FSETGQ WG+PLY W+ +E + +S+W+ R+R+A +L+ RIDHFRGF + Sbjct: 242 VVAGVPPDYFSETGQRWGNPLYRWEVLEEEGFSFWIARLRKALELFHLVRIDHFRGFEAY 301 Query: 382 WAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGM 441 W +P+ A+ GRW PG+ LF I + G+I I+AEDLGVIT +V LR G PGM Sbjct: 302 WEIPASCPTAVEGRWVKAPGEKLFARIQEAFGRIPILAEDLGVITPEVEALRDRFGLPGM 361 Query: 442 AVLQFAFGGGADNPHLPHNHEVNQ--VVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIA 499 VLQFAF G +NP LPHN+ + VVY+GTHDNDT GW+ T E+ +YL+ Sbjct: 362 KVLQFAFDNGMENPFLPHNYPEHGRVVVYTGTHDNDTTLGWYRTATPHERDFLKRYLADW 421 Query: 500 G-----EDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSARMNTPATEVGNWGWRIPSST 554 G E ++ W++++ +S A+ A+ P+QD+L LGS ARMN P GNW WR+ Sbjct: 422 GITFREEAEVPWALMRLGMASRARLAVYPVQDVLALGSEARMNYPGRPSGNWAWRLRPG- 480 Query: 555 SFDNLETESDRLRDLLSLYGRL 576 + E +RL L GR+ Sbjct: 481 --EIKEEHGERLLSLAEATGRV 500 >2OWC-A nrPDB Length = 503 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 204/503 (40%), Positives = 282/503 (56%), Gaps = 15/503 (2%) Query: 82 RRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSVWQVLPLVPPDEGGSPYAGQDA 141 R G+LLHPTS GP+G+G LG+EA F+ +L G WQVLPL P G SPY A Sbjct: 8 RAFGLLLHPTSLPGPYGVGVLGQEARDFLRFLKEAGGRYWQVLPLGPTGYGDSPYQSFSA 67 Query: 142 NCGNTLLISLDELVKDGLLIKDELPQPIDADSVNYQTANKLKSPLITKAAKRLID-GNGE 200 GN LI L L + G + ++ P V+Y K P + +A + + + E Sbjct: 68 FAGNPYLIDLRPLAERGYVRLEDPGFP--QGRVDYGLLYAWKWPALKEAFRGFKEKASPE 125 Query: 201 LKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQKE 260 + FR + WLED A F A+ W WP PL+ R AL + E Sbjct: 126 EREAFAAFREREA--WWLEDYALFMALKGAHGGLPWNRWPLPLRKREEKALREAKSALAE 183 Query: 261 FIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFP 320 + Q+LF RQW ++ A G+ I+GDMPI+V SA+VWA+ + F L+++G P Sbjct: 184 EVAFHAFTQWLFFRQWGALKAEAEALGIRIIGDMPIFVAEDSAEVWAHPEWFHLDEEGRP 243 Query: 321 LLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAG 380 +V+GVPPD FSETGQ WG+PLY W +E + +S+W+ R+ +A +L+ RIDHFRGF Sbjct: 244 TVVAGVPPDYFSETGQRWGNPLYRWDVLEREGFSFWIRRLEKALELFHLVRIDHFRGFEA 303 Query: 381 FWAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPG 440 +W +P+ A+ GRW PG+ LF I + G++ ++AEDLGVIT +V LR G PG Sbjct: 304 YWEIPASCPTAVEGRWVKAPGEKLFQKIQEVFGEVPVLAEDLGVITPEVEALRDRFGLPG 363 Query: 441 MAVLQFAFGGGADNPHLPHNHEVNQ--VVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSI 498 M VLQFAF G +NP LPHN+ + VVY+GTHDNDT GW+ T EK+ +YL+ Sbjct: 364 MKVLQFAFDDGMENPFLPHNYPAHGRVVVYTGTHDNDTTLGWYRTATPHEKAFMARYLAD 423 Query: 499 AG-----EDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSARMNTPATEVGNWGWRIPSS 553 G E+++ W+++ S A+ A+ P+QD+L LGS ARMN P GNW WR+ Sbjct: 424 WGITFREEEEVPWALMHLGMKSVARLAVYPVQDVLALGSEARMNYPGRPSGNWAWRLLPG 483 Query: 554 TSFDNLETESDRLRDLLSLYGRL 576 + RLR + RL Sbjct: 484 ---ELSPEHGARLRAMAEATERL 503 >1TZ7-A nrPDB Length = 505 Score = 634 bits (1634), Expect = 0.0, Method: Composition-based stats. Identities = 207/504 (41%), Positives = 293/504 (58%), Gaps = 18/504 (3%) Query: 75 VPDPESRRRAGVLLHPTSFRGPHGIGDLGEEAFRFIDWLHSTGCSVWQVLPLVPP--DEG 132 VP R AG+LLH TS P+GIGDLG+EA+RF+D+L G S+WQVLPL P + G Sbjct: 15 VPRGSHMRLAGILLHVTSLPSPYGIGDLGKEAYRFLDFLKECGFSLWQVLPLNPTSLEAG 74 Query: 133 GSPYAGQDANCGNTLLISLDELVKDGLLIKDELPQPIDADSVNYQTANKLKSPLITKAAK 192 SPY+ GN +LI +EL+++ L+ + +L + +++ Y+ + K L+ KA K Sbjct: 75 NSPYSSNSLFAGNYVLIDPEELLEEDLIKERDLKRFPLGEAL-YEVVYEYKKELLEKAFK 133 Query: 193 RLIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALE 252 N L DF + S WL D A + AI W+EW E LK R AL+ Sbjct: 134 -----NFRRFELLEDFLKEH--SYWLRDYALYMAIKEEE-GKEWYEWDEELKRREKEALK 185 Query: 253 AIYESQKEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKHF 312 + K + QF+F +QW+K+R YAR +G+ I+GD+P+Y Y SADVW N + F Sbjct: 186 RVLNKLKGRFYFHVFVQFVFFKQWEKLRRYARERGISIVGDLPMYPSYSSADVWTNPELF 245 Query: 313 LLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRI 372 L+ PL V+GVPPD FS+TGQLWG+P+Y+W+ E + + WW+ R+ L+D R+ Sbjct: 246 KLDGDLKPLFVAGVPPDFFSKTGQLWGNPVYNWEEHEKEGFRWWIRRVLHNLKLFDFLRL 305 Query: 373 DHFRGFAGFWAVPSEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVEL 432 DHFRGF +W VP + A+ GRW PGK+LF + K IAEDLG IT +V L Sbjct: 306 DHFRGFEAYWEVPYGEETAVNGRWVKAPGKTLFKKLLSYFPKNPFIAEDLGFITDEVRYL 365 Query: 433 RKSIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDNDTIRGWWDTLDQEEKSKA 492 R++ PG V++FAF ++ HLPHN E N V Y+ THD IRGW++ L +E + + Sbjct: 366 RETFKIPGSRVIEFAF-YDKESEHLPHNVEENNVYYTSTHDLPPIRGWFENLGEESRKRL 424 Query: 493 MKYLSIA-GEDDISWSVIQAAFSSTAQTAIIPMQDILGLGSSARMNTPATEVGNWGWRIP 551 +YL E+ ++ +I+ S A+ AII MQD+L LG+ ARMN P GNW WRI Sbjct: 425 FEYLGREIKEEKVNEELIRLVLISRAKFAIIQMQDLLNLGNEARMNYPGRPFGNWRWRIK 484 Query: 552 SSTSFDNLETESDRLRDLLSLYGR 575 + + + ++ LL +YGR Sbjct: 485 EDYT-----QKKEFIKKLLGIYGR 503 >4S3P-A nrPDB Length = 696 Score = 473 bits (1218), Expect = e-134, Method: Composition-based stats. Identities = 94/411 (22%), Positives = 157/411 (38%), Gaps = 31/411 (7%) Query: 97 HGIGDLGEEAFRFIDWLHSTGCSVW--QVLPLVPPD-EGGSPYAGQDANCGNTLLISLDE 153 GIGD G+ +D G + + L P + E SPY+ N + I ++ Sbjct: 159 WGIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA 218 Query: 154 LVKDGLL------------IKDELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGEL 201 V+D L + L Q DAD V+Y T LK + A K + E Sbjct: 219 -VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDEQ 277 Query: 202 KSKLLDFRNDPSISCWLE---DAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALEAIYESQ 258 + F + S + + DA + + + W WPE +N + E Sbjct: 278 MAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFCEEH 337 Query: 259 KEFIDLFIAKQFLFQRQWQKVREYAR--RQGVDIMGDMPIYVGYHSADVWANKKHFLLNK 316 ++ +D ++ Q+L Q+ E ++ + + D+ + V A+ W +++ + L Sbjct: 338 RDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDRELYCLKA 397 Query: 317 KGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLYDECRIDHFR 376 G PPD+ GQ WG P D + + Y ++ +R RIDH Sbjct: 398 S------VGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHVM 451 Query: 377 GFAGFWAVPSEAKVAMVGRWKVGPGKSLFD--AISKGVGKIKIIAEDLGVITKDVVELRK 434 W +P + A G + P L A+ + +I EDLG + ++V + Sbjct: 452 SMLRLWWIPY-GETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGKLR 510 Query: 435 SIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDNDTIRGWWDTLD 485 S G VL F P + + + THD T+RG+W+ D Sbjct: 511 SSGVYSYKVLYFENDHEK-TFRAPKAYPEQSMAVAATHDLPTLRGYWECGD 560 >5B68-A nrPDB Length = 714 Score = 347 bits (890), Expect = 7e-96, Method: Composition-based stats. Identities = 92/487 (18%), Positives = 168/487 (34%), Gaps = 73/487 (14%) Query: 83 RAGVLLHPTSFRG--PHGIGDLGEEAFRFIDWLHSTGCSVW--QVL---PLVPPDEGGSP 135 R+GV+ S R G+GD + + + PL P + SP Sbjct: 177 RSGVMAQIYSVRSTLSWGMGDFNDLGNLASVVAQDGADFLLINPMHAAEPLPPTE--DSP 234 Query: 136 YAGQDANCGNTLLISLDELVKDGLLI---KDEL--------PQPIDADSVNYQTANKLKS 184 Y N + I ++++ + L +D++ + + +D + K Sbjct: 235 YLPTTRRFINPIYIRVEDIPEFNQLEIDLRDDIAEMAAEFRERNLTSDIIERNDVYAAKL 294 Query: 185 PLITKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLK 244 ++ + + + E ++ + F L D A + A Sbjct: 295 QVLRAIFE--MPRSSEREANFVSFVQREGQG--LIDFATWCA------------------ 332 Query: 245 NRHLSALEAIYESQ---KEFIDLFIAKQFLFQRQWQKVREYARRQG--VDIMGDMPIYVG 299 +R + E+++ ++ E ++ Q+L Q ++ A G + IM D+ + V Sbjct: 333 DRETAQSESVHGTEPDRDELTMFYMWLQWLCDEQLAAAQKRAVDAGMSIGIMADLAVGVH 392 Query: 300 YHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDWKAMESDQYSWWVNR 359 AD N H L P G PPD +++ GQ W P + + + Y W N Sbjct: 393 PGGADA-QNLSHVLA-----PDASVGAPPDGYNQQGQDWSQPPWHPVRLAEEGYIPWRNL 446 Query: 360 IRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKVGPGKSLFD--AISKGVGKIKI 417 +R R+DH G + +P A G + +L A+ + + Sbjct: 447 LRTVLRHSGGIRVDHVLGLFRLFVMPRMQSPA-TGTYIRFDHNALVGILALEAELAGAVV 505 Query: 418 IAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGADNPHLPHNHEVNQVVYSGTHDNDTI 477 I EDLG V + G G ++L F P + + THD Sbjct: 506 IGEDLGTFEPWVQDALAQRGIMGTSILWFEHSPSQPGPRRQEEYRPLALTTVTTHDLPPT 565 Query: 478 RGWWDTLDQEEKSKAMKYLSIAGED-------DISWS--VIQAAFSSTAQTAIIPMQDIL 528 G+ + E + L + D D+ W ++ A S+ A +P ++ + Sbjct: 566 AGYLEG----EHIALRERLGVLNTDPAAELAEDLQWQAEILDVAASANA----LPAREYV 617 Query: 529 GLGSSAR 535 GL R Sbjct: 618 GLERDQR 624 >6D8K-A nrPDB Length = 597 Score = 36.6 bits (83), Expect = 0.028, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 43/125 (34%), Gaps = 15/125 (12%) Query: 331 FSETGQLWGSPLYDWKAMESD-----QYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVP 385 +S G L + DW + + W+ +D R+ H R F F AV Sbjct: 72 YSFQGGLRLNVPGDWNSQTPELKYYEGTVWYAR-------HFDAKRLTHKRQFLYFGAVS 124 Query: 386 SEAKVAMVGRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQ 445 +V + G G + F V + E+ I +V R P M+ Sbjct: 125 YRCRVYLNGAEI-GSHEGGFTPFQIEVTDLLNEGEN--FIAIEVNNRRTKDAIPAMSFDW 181 Query: 446 FAFGG 450 + +GG Sbjct: 182 WNYGG 186 >4TQT-A nrPDB Length = 497 Score = 34.3 bits (77), Expect = 0.16, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 54/190 (28%), Gaps = 25/190 (13%) Query: 194 LIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRHLSALEA 253 L D G L L ++ + D ++ AI W E N ++ Sbjct: 105 LPDSEGNLLDALQEWFQKAGKAR--TDYSFHMAITG---------WNERTFNEMAEVVKR 153 Query: 254 IYESQKEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMPIYVGYHSADVWANKKHFL 313 + K F+ A + + A +G MP+ + V + + Sbjct: 154 GINTFKHFMAYKGALMVNDDEMFASFQRCAE------LGAMPLVHAENGDIVAQLQAKLM 207 Query: 314 LNKKGFPLLVS-GVPPDLFSETGQLW-------GSPLYDWKAMESDQYSWWVNRIRRAQD 365 P + PP++ E G PLY + ++ Sbjct: 208 AEGNDGPEAHAYSRPPEVEGEATNRAIMIADQAGVPLYVVHVSCEQSHEAIRRARQKGMR 267 Query: 366 LYDECRIDHF 375 ++ E I H Sbjct: 268 VFGEPLIQHL 277 >1S7T-A nrPDB Length = 348 Score = 33.6 bits (75), Expect = 0.24, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 8/94 (8%) Query: 340 SPLYDWKA--MESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMV---G 394 +P Y+ +A ME + +W ++A+ R+D R G++ + G Sbjct: 42 NPRYEPRARWMEQEGPEYWERETQKAKGNEQSFRVD-LRTLLGYYNQSKGGSHTIQVISG 100 Query: 395 RWKVGPGKSLFDAISKGVGKIKIIA--EDLGVIT 426 G+ L IA EDL T Sbjct: 101 CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWT 134 >5GUW-M nrPDB Length = 568 Score = 33.6 bits (75), Expect = 0.24, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 11/89 (12%) Query: 142 NCGNTLLISLDELVKDGLLIKDELPQPIDADSVNYQTANKLKSPLITKAAKRLIDGNGEL 201 N G++ +S +++ I+ PQP + P + ++ K L+ Sbjct: 115 NWGSSGELSKEQITLMAKYIQHTPPQPP-----------EWGMPEMRESWKVLVKPEDRP 163 Query: 202 KSKLLDFRNDPSISCWLEDAAYFAAIDNT 230 K +L D S L DA A +D Sbjct: 164 KKQLNDLDLPNLFSVTLRDAGQIALVDGD 192 >1BII-A nrPDB Length = 365 Score = 32.8 bits (73), Expect = 0.47, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 8/94 (8%) Query: 340 SPLYDWKA--MESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMV---G 394 +P Y+ +A +E + +W RRA+ R+D R ++ + + G Sbjct: 66 NPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVD-LRTALRYYNQSAGGSHTLQWMAG 124 Query: 395 RWKVGPGKSLFDAISKGVGKIKIIA--EDLGVIT 426 G+ L IA EDL T Sbjct: 125 CDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWT 158 >3H3A-A nrPDB Length = 441 Score = 31.6 bits (70), Expect = 0.96, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 42/124 (33%), Gaps = 6/124 (4%) Query: 165 LPQPIDADSVNYQTANKLKSPLITKAAKRLIDGN--GELKSKLLDFRNDPSISCWLEDAA 222 L +++ + L + ++ L+ +L + + + A Sbjct: 179 LRAIRFEQRFDFRIEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMA 238 Query: 223 YFAAIDNTL-NAYSWFEWPEPLKN--RHLSALEAIYESQKEFID-LFIAKQFLFQRQWQK 278 F I + Y E ++N R++ +E + F L + +F W++ Sbjct: 239 QFDVIKHLFPKTYYTPSMDEKMENLFRNIPWVEENFGEVDRFYAVLHVFLEFYDDESWKE 298 Query: 279 VREY 282 VR+ Sbjct: 299 VRDR 302 >2RC9-A nrPDB Length = 294 Score = 31.6 bits (70), Expect = 0.98, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 35/113 (30%) Query: 394 GRWKVGPGKSLFDAISKGVGKIKIIAEDLGVITKDVVELRKSIGAPGMAVLQFAFGGGAD 453 G WK G L + G + + + + V++ + + +L G Sbjct: 98 GAWKNGHWTGLVGDLLSGTANMAVTSFSINTARSQVIDFTSPFFSTSLGILVRTRGTELS 157 Query: 454 NPHLPHNHEVNQVVYSGTHDNDTIRGWWDTLDQEEKSKAMKYLSIAGEDDISW 506 H P H +Q GT + + E +Y A D + + Sbjct: 158 GIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEMHEYMRRYNVPATPDGVQY 210 >6BJW-A nrPDB Length = 635 Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Query: 236 WFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQRQWQKVREYARRQGVDIMGDMP 295 W+E +PLK+ + A Y KE D ++F ++ V EY + Q + ++ Sbjct: 57 WYE--KPLKDADTMPVPASYNDLKEGTDFRDHYGWVFYQRNISVPEYVKSQRI-VLRCAA 113 Query: 296 IYVGYHSADVWANKKHFLLNKKGF 319 + H A ++ N K +K GF Sbjct: 114 V---THYAMIYLNGKLICEHKGGF 134 >4FLN-A nrPDB Length = 539 Score = 30.9 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 1/63 (1%) Query: 185 PLITKAAKRLIDGNGELKSKLLDF-RNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPL 243 P A K E K L DF R+ + + DA++ A+ ++ ++ P Sbjct: 7 PPQKMAFKAFGSPKKEKKESLSDFSRDQQTDPAKIHDASFLNAVVKVYCTHTAPDYSLPW 66 Query: 244 KNR 246 + + Sbjct: 67 QKQ 69 >3GZY-B nrPDB Length = 186 Score = 30.9 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 21/155 (13%) Query: 234 YSWFEWPEPLKNRHLSALEAIYESQKEFIDLFIAKQFLFQ-----RQWQKVR--EYARRQ 286 + W P L+ +H +E Y + + +D + + W +R AR Q Sbjct: 10 FEWPAKPVSLELQH--QVEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQ 67 Query: 287 GVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLYD-- 344 G++ + P H D A + + +K L + PP S T L + + Sbjct: 68 GLEYV---PAGANAHFDDTHATM-YGRIRQKTSDLNWAEDPP---SRTRHLVSNVIVREM 120 Query: 345 --WKAME-SDQYSWWVNRIRRAQDLYDECRIDHFR 376 +E + + + +R+ R D++ R D R Sbjct: 121 DTPGTLEVASAFLLYRSRLERQVDVFAGERRDVLR 155 >5OQI-A nrPDB Length = 431 Score = 30.5 bits (67), Expect = 2.2, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 8/94 (8%) Query: 340 SPLYDWKA--MESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMV---G 394 +P Y+ +A ME + +W ++A+ R+D R G + + G Sbjct: 184 NPRYEPRARWMEQEGPEYWERATQKAKGNEQSFRVD-LRTLLGCYNQSKGGSHTIQVISG 242 Query: 395 RWKVGPGKSLFDAISKGVGKIKIIA--EDLGVIT 426 G+ L IA EDL T Sbjct: 243 CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWT 276 >3WEN-A nrPDB Length = 913 Score = 29.7 bits (65), Expect = 3.7, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Query: 329 DLFSETGQLWGSPLYDWKAMESDQYSWWVNRIRRAQDLY--DECRIDHFRGFAGFWAVPS 386 D G +W P+Y ++ S+WV+ I+R +D+ D ID + P+ Sbjct: 423 DGNPYLGSVWPGPVYYPDFLDPAARSFWVDEIKRFRDILPIDGIWIDMNEASNFITSAPT 482 Query: 387 EAKVAMVGRWK 397 +K Sbjct: 483 PGSTLDNPPYK 493 >2V3G-A nrPDB Length = 283 Score = 28.9 bits (63), Expect = 5.7, Method: Composition-based stats. Identities = 11/84 (13%), Positives = 26/84 (30%) Query: 188 TKAAKRLIDGNGELKSKLLDFRNDPSISCWLEDAAYFAAIDNTLNAYSWFEWPEPLKNRH 247 A K + G + F N + W+ A + ++ +W W + Sbjct: 21 ESAIKSFQELQGRKLDIVHQFINWSTDFSWVRPYADAVYNNGSILMITWEPWEYNTVDIK 80 Query: 248 LSALEAIYESQKEFIDLFIAKQFL 271 +A + + + + +L Sbjct: 81 NGKADAYITRMAQDMKAYGKEIWL 104 >3H6E-A nrPDB Length = 482 Score = 28.9 bits (63), Expect = 6.6, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 13/39 (33%), Gaps = 2/39 (5%) Query: 320 PLLVSGVP--PDLFSETGQLWGSPLYDWKAMESDQYSWW 356 P +G P PD + QLW M + W Sbjct: 114 PFARTGSPALPDGLNIGSQLWWLDQLHPDVMANATLLPW 152 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.128 0.356 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,237,626 Number of Sequences: 36641 Number of extensions: 923266 Number of successful extensions: 2458 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 2392 Number of HSP's gapped (non-prelim): 35 length of query: 576 length of database: 10,336,785 effective HSP length: 102 effective length of query: 474 effective length of database: 6,599,403 effective search space: 3128117022 effective search space used: 3128117022 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.6 bits)