BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9LQ04 (301 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4QQR-A nrPDB 624 e-179 4WOK-A nrPDB 41 7e-04 2PK3-A nrPDB 37 0.012 1KC3-A nrPDB 37 0.015 1RKX-A nrPDB 35 0.052 4I8P-A nrPDB 34 0.092 4G5H-A nrPDB 32 0.44 2C54-A nrPDB 31 0.61 4J2O-A nrPDB 30 0.92 1NVM-A nrPDB 30 1.2 1WVG-A nrPDB 30 1.8 3EH1-A nrPDB 30 1.9 1VKH-A nrPDB 29 2.7 3AJA-A nrPDB 29 2.9 5H9U-C nrPDB 29 3.2 3ZDS-A nrPDB 28 3.5 4BM5-A nrPDB 28 3.9 3CKY-A nrPDB 28 3.9 1VL0-A nrPDB 28 4.0 3L76-A nrPDB 28 4.2 5VYM-A nrPDB 28 5.3 6GPK-A nrPDB 27 7.3 1BXK-A nrPDB 27 9.3 >4QQR-A nrPDB Length = 301 Score = 624 bits (1609), Expect = e-179, Method: Compositional matrix adjust. Identities = 301/301 (100%), Positives = 301/301 (100%) Query: 1 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVK 60 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVK Sbjct: 1 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVK 60 Query: 61 PSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYD 120 PSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYD Sbjct: 61 PSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYD 120 Query: 121 SGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNF 180 SGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNF Sbjct: 121 SGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNF 180 Query: 181 ITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYI 240 ITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYI Sbjct: 181 ITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYI 240 Query: 241 DPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKTEVK 300 DPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKTEVK Sbjct: 241 DPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKTEVK 300 Query: 301 A 301 A Sbjct: 301 A 301 >4WOK-A nrPDB Length = 336 Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 32/175 (18%) Query: 11 SSFNFLIYGKTGWIGGLLGKLCEAQG---ITYT--------------YGSGRLQDRQSIV 53 S+ N L+ G G+IG KL QG + Y + G + D+ +V Sbjct: 10 SANNVLVVGGAGFIGSHTAKLLAGQGYAPVVYDNLSTGHQSAVRWGDFVEGDILDQARLV 69 Query: 54 ADIESVKPSHV--FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINY 111 +E P V F A+ G D + + R NV GT +L D CR + + Sbjct: 70 ETMEKYAPVAVIHFAASAYVGESVEDPAKYY-----RNNVGGTQSLLDACRLTRTQNVIF 124 Query: 112 ATGC-IFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLR 165 ++ C + S P+G G E P + Y +TK + E +L +Y LR Sbjct: 125 SSSCATYGVPSRLPIGEG----EAQNPI---NPYGRTKLIAEHMLADYAVAYGLR 172 >2PK3-A nrPDB Length = 321 Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 22/162 (13%) Query: 12 SFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGR---------------LQDRQSIVADI 56 S LI G G++G L Q + +G+ R + D Q + I Sbjct: 12 SMRALITGVAGFVGKYLANHLTEQNVE-VFGTSRNNEAKLPNVEMISLDIMDSQRVKKVI 70 Query: 57 ESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCI 116 +KP ++F+ A + + W +K T TNV GTL + D R+ L G Sbjct: 71 SDIKPDYIFHLAAKSSVKD-SWL--NKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSS 127 Query: 117 FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNY 158 EY P S + + + P S Y +KA V L + Y Sbjct: 128 EEYGMILPEESPVSEENQLRPM---SPYGVSKASVGMLARQY 166 >1KC3-A nrPDB Length = 299 Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust. Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 26/242 (10%) Query: 13 FNFLIYGKTGWIGGLLGKLCEAQG--ITYTYGS----GRLQDRQSIVADIESVKPSHVFN 66 N L++GKTG +G L + G I S G + + + + ++P + N Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVN 60 Query: 67 AAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLG 126 AA T VD ES N +A E G +++Y+T +F P Sbjct: 61 AAAHTA---VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVF------PGT 111 Query: 127 SGIGFKEEDTPNFTGSFYSKTKAMVEELLK-NYENVCTLRVRMPISSDLTNPRNFITKIA 185 I ++E D + + Y KTK E+ L+ N R + N + ++A Sbjct: 112 GDIPWQETDATSPL-NVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLA 170 Query: 186 RYEKVVDI-------PNSMTILDELLPISIEMA--KRNLTGIYNFTNPGVVSHNEILEMY 236 + + + + P +L + +I +A K + G+Y+ G + ++ + Sbjct: 171 KERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALV 230 Query: 237 RD 238 D Sbjct: 231 FD 232 >1RKX-A nrPDB Length = 357 Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 17/122 (13%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103 G ++D+ ++ I +P VF+ A +P V S VET TNV GT+ L + R Sbjct: 64 GDIRDQNKLLESIREFQPEIVFHMAA---QPLVRLSYSEPVETYSTNVMGTVYLLEAIRH 120 Query: 104 KGLV--LINYATG-CIFEYDSGHPLGSGIGFKEEDTPNFTGSF--YSKTKAMVEELLKNY 158 G V ++N + C YD+ + G++E + G + YS +K E + +Y Sbjct: 121 VGGVKAVVNITSDKC---YDNKEWI---WGYRENEA---MGGYDPYSNSKGCAELVTSSY 171 Query: 159 EN 160 N Sbjct: 172 RN 173 >4I8P-A nrPDB Length = 520 Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 95 LTLADICREKGLV--LINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMV 151 L LADIC+E GL ++N TG D+G PL + + D FTGSF + K M Sbjct: 212 LELADICKEVGLPSGVLNIVTG--LGPDAGAPLSA---HPDVDKVAFTGSFETGKKIMA 265 >4G5H-A nrPDB Length = 363 Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 5/51 (9%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGT 94 G ++D QS+ + V +VF+AA + P+ CE VE ++TN+ GT Sbjct: 80 GDVRDSQSVETAMRDV--DYVFHAAALKQVPS---CEFFPVEAVKTNIIGT 125 >2C54-A nrPDB Length = 379 Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust. Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 21/192 (10%) Query: 63 HVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSG 122 HVFN A G + + +S+ + N + + + R G+ YA+ + Sbjct: 96 HVFNLAADMG--GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFK 153 Query: 123 HPLGSGIGFKEEDT-PNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNP---- 177 + + KE D P Y + EEL K+Y + R+ ++ P Sbjct: 154 QLETTNVSLKESDAWPAEPQDAYGLERLATEELCKHYNKDFGIECRIGRFHNIYGPFGTW 213 Query: 178 ------------RNFITKIARYEKVVD--IPNSMTILDELLPISIEMAKRNLTGIYNFTN 223 R T R+E D S T +DE + + + K + N + Sbjct: 214 KGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGS 273 Query: 224 PGVVSHNEILEM 235 +VS NE+ EM Sbjct: 274 DEMVSMNEMAEM 285 >4J2O-A nrPDB Length = 363 Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGT 94 G ++D SI+ V ++++AA + P+ CE H +E ++TNV GT Sbjct: 78 GDVRDYNSILNATRGV--DYIYHAAALKQVPS---CEFHPMEAVKTNVLGT 123 >1NVM-A nrPDB Length = 345 Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 5/125 (4%) Query: 2 VADANGSSSSSFNFLIYGKTG--WIGGLLGKLCEAQGITYTY-GSGRLQD-RQSIVADIE 57 VA +G SSFN+ T +I + G++ AQ T G G + D + + A Sbjct: 49 VAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGAR 108 Query: 58 SVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIF 117 V+ + A V+ + ++++ + ++T+ + + A+ E+G ++ +Y CI+ Sbjct: 109 VVRVATHCTEADVS-KQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIY 167 Query: 118 EYDSG 122 DSG Sbjct: 168 MADSG 172 >1WVG-A nrPDB Length = 359 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103 G ++D + + + I KP VF+ A +P V ++T TNV GT+ L + ++ Sbjct: 64 GDIRDFEKLRSSIAEFKPEIVFHMAA---QPLVRLSYEQPIKTYSTNVMGTVHLLETVKQ 120 Query: 104 KG 105 G Sbjct: 121 VG 122 >3EH1-A nrPDB Length = 751 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Query: 179 NFITKIARYEKVVDIPNSMTILDELLPISIEMAK---------RNLTGIYNFTNPGVVSH 229 NFI + Y IP MT L EL +S E A+ R L+ I + + Sbjct: 661 NFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAK 720 Query: 230 NEILE-MYRDYIDPSFTWKNFTLEEQAKV 257 E + + D + +F++ F L Q ++ Sbjct: 721 AEFFQHLIEDRTEAAFSYYEFLLHVQQQI 749 >1VKH-A nrPDB Length = 273 Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Query: 134 EDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYEKVV 191 E+TPN + K+M E VC + +S ++TNPRN ++ ++V Sbjct: 56 ENTPNDFNQLANTIKSMDTE-----STVCQYSIEYRLSPEITNPRNLYDAVSNITRLV 108 >3AJA-A nrPDB Length = 302 Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust. Identities = 14/53 (26%), Positives = 24/53 (45%) Query: 83 KVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSGIGFKEED 135 + E +RT V + D C V+ ++ G + D +G+G G +ED Sbjct: 112 RAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDED 164 >5H9U-C nrPDB Length = 413 Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 15/64 (23%) Query: 40 TYGSGRLQDRQ--------------SIVADIESVKPSHVFNAA-GVTGRPNVDWCESHKV 84 T+G+G L D + +I+ +++ ++P + +A G GRP W E+ +V Sbjct: 345 TFGTGVLPDEKLTEIAKKVFDPRPLAIIEELDLLRPIYTPTSAYGHFGRPGFPWEETDRV 404 Query: 85 ETIR 88 E +R Sbjct: 405 EALR 408 >3ZDS-A nrPDB Length = 433 Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust. Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Query: 169 PISSD-LTNPRNFITKIARYEKV 190 PI S+ L NPR+F+T +A YE+ Sbjct: 213 PIGSNGLANPRDFLTPVAHYEEA 235 >4BM5-A nrPDB Length = 348 Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 21/41 (51%) Query: 214 NLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQ 254 N +Y GV N + EMYR Y+ SF K+ T +E+ Sbjct: 49 NEQAVYPVNLRGVFDLNILQEMYRQYLIQSFAAKSRTEKER 89 >3CKY-A nrPDB Length = 301 Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust. Identities = 13/47 (27%), Positives = 23/47 (48%) Query: 51 SIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTL 97 +++ D+ SV PS A V +D+ ++ + AGTLT+ Sbjct: 92 TVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTI 138 >1VL0-A nrPDB Length = 292 Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 13/159 (8%) Query: 1 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVAD---IE 57 M +D LI G G +G + K + + + + D +++A Sbjct: 1 MGSDKIHHHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFN 60 Query: 58 SVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIF 117 KP+ V N A T VD CE + N G LA G ++ +T +F Sbjct: 61 EKKPNVVINCAAHTA---VDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVF 117 Query: 118 EYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLK 156 + ++ P+ +E P S Y KTK E +K Sbjct: 118 DGEAKEPITEF----DEVNPQ---SAYGKTKLEGENFVK 149 >3L76-A nrPDB Length = 600 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 192 DIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGV-VSHNEILEMYRDYIDPSFTWKNFT 250 D+P +T L+P + MA+ + + G V H +E+ R+Y P +++ Sbjct: 176 DVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWS 235 Query: 251 LEEQAKVIVAPRSNNEL 267 E KV+ P N L Sbjct: 236 DEPGTKVVAPPVQNRSL 252 >5VYM-A nrPDB Length = 232 Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 10/63 (15%) Query: 77 DWCESHKVETIRT----NVAGTLTLADICREKGLVLINYATGCIFE----YDSGHPLGSG 128 DW S+K + T + A T LAD G V++ YATG I E + G+P G+G Sbjct: 57 DWS-SYKTVVLPTVLILSAADTQRLADFAAAGGRVVVGYATGLIDEHFHTWLGGYP-GAG 114 Query: 129 IGF 131 G Sbjct: 115 DGL 117 >6GPK-A nrPDB Length = 373 Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 20/152 (13%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTG-RPNVDWCESHKVETIRTNVAGTLTLADICR 102 G L D +V I VKP+ ++N + + + D E T + GTL L D + Sbjct: 86 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY----TADVDGVGTLRLLDAVK 141 Query: 103 EKGLV----LINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNY 158 GL+ +T ++ P ++E TP + S Y K ++ N+ Sbjct: 142 TCGLINSVKFYQASTSQLYGKVQEIP-------QKETTPFYPRSPYGAAKLYAYWIVVNF 194 Query: 159 ENVCTLRVRMPISSDLTNPR---NFIT-KIAR 186 L I + +PR NF+T KI+R Sbjct: 195 REAYNLFAVNGILFNHESPRRGANFVTRKISR 226 >1BXK-A nrPDB Length = 355 Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust. Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 8/174 (4%) Query: 16 LIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAAGVTGRPN 75 ++ K + G L+ AQ + + + DR + +P V + A + + Sbjct: 30 VVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLAAES---H 86 Query: 76 VDWCESHKVETIRTNVAGTLTLADICREKGLVLI-NYATGCIFEYDSGHP----LGSGIG 130 VD I TN+ GT TL + R L + + F + S L S Sbjct: 87 VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDD 146 Query: 131 FKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKI 184 F E TP S YS +KA + L++ + L + S+ P +F K+ Sbjct: 147 FFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKL 200 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4QQR-A nrPDB 577 e-165 4WOK-A nrPDB 203 1e-52 Sequences not found previously or not previously below threshold: 1I3M-A nrPDB 69 2e-12 1UDA-A nrPDB 69 3e-12 3ENK-A nrPDB 69 3e-12 2C20-A nrPDB 65 4e-11 1ORR-A nrPDB 62 2e-10 1Z45-A nrPDB 61 5e-10 2PZM-A nrPDB 60 9e-10 2PK3-A nrPDB 58 5e-09 6BI4-A nrPDB 58 5e-09 4WPG-A nrPDB 57 9e-09 1KC3-A nrPDB 55 4e-08 1GY8-A nrPDB 54 5e-08 1BXK-A nrPDB 52 2e-07 4LIS-A nrPDB 52 4e-07 1RKX-A nrPDB 52 4e-07 6GPK-A nrPDB 50 1e-06 1R66-A nrPDB 49 2e-06 1KEU-A nrPDB 49 2e-06 1OC2-A nrPDB 47 1e-05 3RUE-A nrPDB 46 2e-05 2C54-A nrPDB 46 2e-05 5U9C-A nrPDB 45 4e-05 1DB3-A nrPDB 45 6e-05 5UZH-A nrPDB 44 1e-04 1WVG-A nrPDB 43 1e-04 2Z95-A nrPDB 43 2e-04 6AQY-A nrPDB 42 2e-04 2HUN-A nrPDB 42 4e-04 1N7G-A nrPDB 40 0.002 1RPN-A nrPDB 37 0.010 3M2P-A nrPDB 36 0.021 2Q1T-A nrPDB 36 0.024 4EJ0-A nrPDB 35 0.030 1EQ2-A nrPDB 35 0.049 2X86-A nrPDB 33 0.15 4G5H-A nrPDB 33 0.18 4B4O-A nrPDB 31 0.79 4J2O-A nrPDB 31 0.82 3EH1-A nrPDB 30 1.0 1LU9-A nrPDB 30 1.8 2GN9-A nrPDB 29 1.8 3ZDS-A nrPDB 29 2.0 6C6P-A nrPDB 29 3.1 2RDY-A nrPDB 29 3.1 3L76-A nrPDB 29 3.4 5D0Q-A nrPDB 29 3.6 3EFC-A nrPDB 29 3.6 2QCZ-A nrPDB 29 3.6 3HFS-A nrPDB 28 4.4 1ND3-A nrPDB 28 6.4 1VKH-A nrPDB 28 6.4 2IWK-A nrPDB 28 6.9 3S61-A nrPDB 27 7.1 >4QQR-A nrPDB Length = 301 Score = 577 bits (1487), Expect = e-165, Method: Composition-based stats. Identities = 301/301 (100%), Positives = 301/301 (100%) Query: 1 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVK 60 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVK Sbjct: 1 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVK 60 Query: 61 PSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYD 120 PSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYD Sbjct: 61 PSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYD 120 Query: 121 SGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNF 180 SGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNF Sbjct: 121 SGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNF 180 Query: 181 ITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYI 240 ITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYI Sbjct: 181 ITKIARYEKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYI 240 Query: 241 DPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKTEVK 300 DPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKTEVK Sbjct: 241 DPSFTWKNFTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKTEVK 300 Query: 301 A 301 A Sbjct: 301 A 301 >4WOK-A nrPDB Length = 336 Score = 203 bits (515), Expect = 1e-52, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 32/175 (18%) Query: 11 SSFNFLIYGKTGWIGGLLGKLCEAQG---ITYT--------------YGSGRLQDRQSIV 53 S+ N L+ G G+IG KL QG + Y + G + D+ +V Sbjct: 10 SANNVLVVGGAGFIGSHTAKLLAGQGYAPVVYDNLSTGHQSAVRWGDFVEGDILDQARLV 69 Query: 54 ADIESVKPSHV--FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINY 111 +E P V F A+ G D + + R NV GT +L D CR + + Sbjct: 70 ETMEKYAPVAVIHFAASAYVGESVEDPAKYY-----RNNVGGTQSLLDACRLTRTQNVIF 124 Query: 112 ATGC-IFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLR 165 ++ C + S P+G G E P + Y +TK + E +L +Y LR Sbjct: 125 SSSCATYGVPSRLPIGEG----EAQNPI---NPYGRTKLIAEHMLADYAVAYGLR 172 >1I3M-A nrPDB Length = 348 Score = 69.0 bits (167), Expect = 2e-12, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 45/180 (25%) Query: 12 SFNFLIYGKTGWIGGLLG-KLCEA------------------------------QGITYT 40 + L+ G G+IG +L EA G + Sbjct: 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE 61 Query: 41 YGSGRLQDRQSIVADIESVKPSHV--FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLA 98 + + D+ ++ + V F G + + R N+ GT+ L Sbjct: 62 FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYY-----RVNLTGTIQLL 116 Query: 99 DICREKGLVLINYATGCI-FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKN 157 +I + G+ + +++ + PL E + Y K+K +EE++++ Sbjct: 117 EIMKAHGVKNLVFSSSATVYGNPQYLPL------DEAHPTGGCTNPYGKSKFFIEEMIRD 170 >1UDA-A nrPDB Length = 338 Score = 69.0 bits (167), Expect = 3e-12, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 39/175 (22%) Query: 15 FLIYGKTGWIGGLLG--------------KLCEAQ-----------GITYTYGSGRLQDR 49 L+ G +G+IG LC ++ G T+ G +++ Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62 Query: 50 QSIVADIESVKPSHV--FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLV 107 + + V F G E + NV GTL L R + Sbjct: 63 ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYD-----NNVNGTLRLISAMRAANVK 117 Query: 108 LINYATGCI-FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV 161 +++ + + P +P Y K+K MVE++L + + Sbjct: 118 NFIFSSSATVYGDNPKIPYVESFPTGTPQSP------YGKSKLMVEQILTDLQKA 166 >3ENK-A nrPDB Length = 341 Score = 68.6 bits (166), Expect = 3e-12, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 46/199 (23%) Query: 8 SSSSSFNFLIYGKTGWIGGLLGKLCEAQGI-------------------------TYTYG 42 S S+ L+ G G+IG A G T + Sbjct: 1 SMSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFH 60 Query: 43 SGRLQDRQSIVADIESVKPSHV--FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADI 100 + D +++ ++ + F A G E + R N+ L+L + Sbjct: 61 ETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYY-----RNNLDSLLSLLRV 115 Query: 101 CREKGLVLINYATGCI-FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE 159 RE+ + I +++ + P+ +E P + Y +TK M E++L++ E Sbjct: 116 MRERAVKRIVFSSSATVYGVPERSPI-------DETFPLSATNPYGQTKLMAEQILRDVE 168 Query: 160 NV------CTLRVRMPISS 172 TLR P+ + Sbjct: 169 AADPSWRVATLRYFNPVGA 187 >2C20-A nrPDB Length = 330 Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 33/177 (18%) Query: 13 FNFLIYGKTGWIGGLLGKLCEAQGITY------------------TYGSGRLQDRQ--SI 52 + LI G G+IG K +G++ + +G L+D+ Sbjct: 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRD 61 Query: 53 VADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINY- 111 V E+++ F A + G + + NV G L L ++ E + + Sbjct: 62 VFTQENIEAVMHFAADSLVGVSMEKPLQYYN-----NNVYGALCLLEVMDEFKVDKFIFS 116 Query: 112 ATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRM 168 +T + + E+T + Y +TK +E++L Y LR ++ Sbjct: 117 STAATYGEVD-------VDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKI 166 >1ORR-A nrPDB Length = 347 Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 47/225 (20%) Query: 15 FLIYGKTGWIGGLLGKLCEAQGI------------------------TYTYGSGRLQDRQ 50 LI G G++G L +QGI + + G ++++ Sbjct: 4 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 63 Query: 51 SIVADIESVKPSHVFNAAGVTG--RPNVDWCESHKVETIRTNVAGTLTLADICREKGLV- 107 + I P F+ AG + C ++ NV GTL L + R+ Sbjct: 64 DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEI-----NVGGTLNLLEAVRQYNSNC 118 Query: 108 LINYATGCIF----------EYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKN 157 I Y++ E ++ + +E T S Y +K ++ + + Sbjct: 119 NIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLD 178 Query: 158 YENVCTLRVRMPISSDLTNPRNFITKIARY-----EKVVDIPNSM 197 Y + L + S + R F T + +K V+I N + Sbjct: 179 YARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI 223 >1Z45-A nrPDB Length = 699 Score = 61.3 bits (147), Expect = 5e-10, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 80/249 (32%), Gaps = 57/249 (22%) Query: 8 SSSSSFNFLIYGKTGWIGGLLGKLCEAQGI-----------TYT--------------YG 42 S S+S L+ G G+IG G TY + Sbjct: 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFY 66 Query: 43 SGRLQDRQSIVADIESVKPSHV--FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADI 100 L DR+ + + K V F G + N+ GT+ L ++ Sbjct: 67 EVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYY-----HNNILGTVVLLEL 121 Query: 101 CREKGLVLINYATGCI-FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE 159 ++ + +++ + + P + E+ P + Y TK +E +L + Sbjct: 122 MQQYNVSKFVFSSSATVYGDATRFP---NMIPIPEECPLGPTNPYGHTKYAIENILNDLY 178 Query: 160 NV-------CTLRVRMPISSDLTNPRNFITKIARYEKVVDIPNSMTILDELLPISIEMAK 212 N LR PI + +P I E + IPN+ LLP ++A Sbjct: 179 NSDKKSWKFAILRYFNPIGA---HPSGLIG-----EDPLGIPNN------LLPYMAQVAV 224 Query: 213 RNLTGIYNF 221 +Y F Sbjct: 225 GRREKLYIF 233 >2PZM-A nrPDB Length = 330 Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 118/302 (39%), Gaps = 62/302 (20%) Query: 11 SSFNFLIYGKTGWIGGLLGKLCEAQG----ITYTY----------------GSGRLQDRQ 50 S LI G G +G L + QG + + G + D Sbjct: 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAG 78 Query: 51 SIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLV-LI 109 + +S KP+HV ++A P DW E TNV G++ +A + G+ L+ Sbjct: 79 LLERAFDSFKPTHVVHSAAAYKDP-DDWAE-----DAATNVQGSINVAKAASKAGVKRLL 132 Query: 110 NYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN-VCTLRVRM 168 N+ T + + P+ D+P + Y +K E L + V +LR+ Sbjct: 133 NFQTALCYGRPATVPI-------PIDSPTAPFTSYGISKTAGEAFLMMSDVPVVSLRL-- 183 Query: 169 PISSDLTNPRNFITKIARYEKVV---------DIPNSMTILDELLPIS-IEMAKRNLTGI 218 +++T PR I I + K + D + + L I+ + + + TG+ Sbjct: 184 ---ANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRPTGV 240 Query: 219 YNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNN----ELDATKLKT 274 +N + S E+ ++ DY+ TL E V VAP +++ LD +K +T Sbjct: 241 FNVSTGEGHSIKEVFDVVLDYVGA-------TLAEPVPV-VAPGADDVPSVVLDPSKTET 292 Query: 275 EF 276 EF Sbjct: 293 EF 294 >2PK3-A nrPDB Length = 321 Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 61/169 (36%), Gaps = 20/169 (11%) Query: 12 SFNFLIYGKTGWIGGLLGKLCEAQGI--------------TYTYGSGRLQDRQSIVADIE 57 S LI G G++G L Q + S + D Q + I Sbjct: 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVIS 71 Query: 58 SVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIF 117 +KP ++F+ A + +V +K T TNV GTL + D R+ L G Sbjct: 72 DIKPDYIFHLAA---KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSE 128 Query: 118 EYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRV 166 EY P S + E+ S Y +KA V L + Y + + Sbjct: 129 EYGMILPEESPVS---EENQLRPMSPYGVSKASVGMLARQYVKAYGMDI 174 >6BI4-A nrPDB Length = 346 Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 100/269 (37%), Gaps = 56/269 (20%) Query: 10 SSSFNFLIYGKTGWIGGL----------LGKLCEAQGITYT----------------YGS 43 S++ N L+ G G+IG K+ +TY+ + Sbjct: 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVK 81 Query: 44 GRLQDRQSIVADIESVKPSHV---FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADI 100 G +Q+ ++ + + V F A R + + TNV GT+TL ++ Sbjct: 82 GEIQN-GELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYD-----TNVIGTVTLLEL 135 Query: 101 CRE-KGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE 159 ++ + L+ +T ++ LG F EE TP S YS +KA + + Y Sbjct: 136 VKKYPHIKLVQVSTDEVYG-----SLGKTGRFTEE-TPLAPNSPYSSSKASADMIALAYY 189 Query: 160 NVCTLRVRMPISSDLTNPRNF--------IT------KIARYEKVVDIPNSMTILDELLP 205 L V + S+ P + +T K+ Y +++ + + + D Sbjct: 190 KTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSA 249 Query: 206 ISIEMAKRNLTGIYNFTNPGVVSHNEILE 234 I + + K + +YN ++ E++E Sbjct: 250 IDVVLHKGRVGEVYNIGGNNEKTNVEVVE 278 >4WPG-A nrPDB Length = 289 Score = 57.0 bits (136), Expect = 9e-09, Method: Composition-based stats. Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 12/149 (8%) Query: 15 FLIYGKTGWIGGLLGKLCEAQGITY---TYGSGRLQDRQSIVADIESVKPSHVFNAAGVT 71 LI G G +G L L + +G+ Y + + + A VKP+ V++ A T Sbjct: 7 ILITGSNGQLGTELRYLLDERGVDYVAVDVAEMDITNEDKVEAVFAQVKPTLVYHCAAYT 66 Query: 72 GRPNVDWCESH-KVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSGIG 130 VD E K NV G+ +A C + G L+ +T + +D P+G Sbjct: 67 A---VDAAEDEGKALNEAINVTGSENIAKACGKYGATLVYISTD--YVFDGNKPVGQ--E 119 Query: 131 FKEEDTPNFTGSFYSKTKAMVEELLKNYE 159 + E D P+ Y +TK + E ++ Y Sbjct: 120 WVETDHPDPKTE-YGRTKRLGELAVERYA 147 >1KC3-A nrPDB Length = 299 Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 16/150 (10%) Query: 14 NFLIYGKTGWIGGLLGKLCEAQG--ITYTYGS----GRLQDRQSIVADIESVKPSHVFNA 67 N L++GKTG +G L + G I S G + + + + ++P + NA Sbjct: 2 NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNA 61 Query: 68 AGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGS 127 A T VD ES N +A E G +++Y+T +F G+ Sbjct: 62 AAHTA---VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP-------GT 111 Query: 128 GIGFKEEDTPNFTGSFYSKTKAMVEELLKN 157 G +E + Y KTK E+ L++ Sbjct: 112 GDIPWQETDATSPLNVYGKTKLAGEKALQD 141 >1GY8-A nrPDB Length = 397 Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 9/126 (7%) Query: 44 GRLQDRQSIVADIESVKPS-HVFNAAGV--TGRPNVDWCESHKVETIRTNVAGTLTLADI 100 G +++ + P V + G D + + NV G L L Sbjct: 76 GDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYD-----NNVVGILRLLQA 130 Query: 101 CREKGLVLINYATGC-IFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE 159 I +++ IF + + + + + S Y ++K + E ++++ Sbjct: 131 MLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCA 190 Query: 160 NVCTLR 165 ++ Sbjct: 191 EAYGIK 196 >1BXK-A nrPDB Length = 355 Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 22/188 (11%) Query: 9 SSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHV--FN 66 + +S ++ K + G L+ AQ + + + DR + +P V Sbjct: 23 NETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHLA 82 Query: 67 AAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICR----------EKGLVLINYATGCI 116 A R I TN+ GT TL + R + + +T + Sbjct: 83 AESHVDRSIDGPAAF-----IETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV 137 Query: 117 FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTN 176 + L S F E TP S YS +KA + L++ + L + S+ Sbjct: 138 YG-----DLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYG 192 Query: 177 PRNFITKI 184 P +F K+ Sbjct: 193 PYHFPEKL 200 >4LIS-A nrPDB Length = 371 Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 53/179 (29%), Gaps = 37/179 (20%) Query: 12 SFNFLIYGKTGWIGGLLG-KLCEA------------------------QGITYTYGSGRL 46 S + L+ G TG+IG L EA G + + Sbjct: 3 SGSVLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIELISGKKAEFAQLDV 62 Query: 47 QDRQSIVADIES---VKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103 D + E+ + F A G + + V NV GT+ L Sbjct: 63 TDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHV-----NVYGTICLLRSMVR 117 Query: 104 KGLVLINYATGCI-FEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV 161 + I +++ + + P + E P + Y TK +E + + N Sbjct: 118 HNVTNIVFSSSATVYGDATRFP---DMIPIPEHCPLGPTNPYGNTKFAIELAITDVINA 173 >1RKX-A nrPDB Length = 357 Score = 51.6 bits (122), Expect = 4e-07, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 63/180 (35%), Gaps = 30/180 (16%) Query: 6 NGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGIT---YTYGS------------------- 43 N S + G TG+ GG L + G T Y+ + Sbjct: 3 NNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSE 62 Query: 44 -GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICR 102 G ++D+ ++ I +P VF+ A +P V S VET TNV GT+ L + R Sbjct: 63 IGDIRDQNKLLESIREFQPEIVFHMAA---QPLVRLSYSEPVETYSTNVMGTVYLLEAIR 119 Query: 103 EKGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC 162 G V YD+ I E+ YS +K E + +Y N Sbjct: 120 HVGGVKAVVNITSDKCYDNK----EWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSF 175 >6GPK-A nrPDB Length = 373 Score = 50.5 bits (119), Expect = 1e-06, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 20/152 (13%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNV-DWCESHKVETIRTNVAGTLTLADICR 102 G L D +V I VKP+ ++N + D E T + GTL L D + Sbjct: 86 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEY----TADVDGVGTLRLLDAVK 141 Query: 103 EKGLVL-INY---ATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNY 158 GL+ + + +T ++ P ++E TP + S Y K ++ N+ Sbjct: 142 TCGLINSVKFYQASTSQLYGKVQEIP-------QKETTPFYPRSPYGAAKLYAYWIVVNF 194 Query: 159 ENVCTLRVRMPISSDLTNPR---NFIT-KIAR 186 L I + +PR NF+T KI+R Sbjct: 195 REAYNLFAVNGILFNHESPRRGANFVTRKISR 226 >1R66-A nrPDB Length = 337 Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 60/186 (32%), Gaps = 45/186 (24%) Query: 15 FLIYGKTGWIGGLLGK-LCEA-------------QGITYT----------------YGSG 44 L+ G G+IG + L +TY + G Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62 Query: 45 RLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREK 104 ++D + ++ V F A R TNV GT TL + Sbjct: 63 DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVF-----TETNVQGTQTLLQCAVDA 117 Query: 105 GLVLINY-ATGCIFE-YDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC 162 G+ + + +T ++ DS G E +P S Y+ +KA + + + Y Sbjct: 118 GVGRVVHVSTDEVYGSIDS--------GSWTESSPLEPNSPYAASKAGSDLVARAYHRTY 169 Query: 163 TLRVRM 168 L VR+ Sbjct: 170 GLDVRI 175 >1KEU-A nrPDB Length = 361 Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 62/210 (29%), Gaps = 45/210 (21%) Query: 15 FLIYGKTGWIGG---------------------LLGKLCEAQGIT----YTYGSGRLQDR 49 LI G G+IG G L I+ Y + + D Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62 Query: 50 QSIVADIESVKPSHV--FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICR----- 102 I E +P V A R I TN+ GT L ++ R Sbjct: 63 AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAF-----IETNIVGTYALLEVARKYWSA 117 Query: 103 --EKGLVLINY---ATGCIFE---YDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEEL 154 E + +T ++ + + E T S YS +KA + L Sbjct: 118 LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177 Query: 155 LKNYENVCTLRVRMPISSDLTNPRNFITKI 184 ++ + L + S+ P +F K+ Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGPYHFPEKL 207 >1OC2-A nrPDB Length = 348 Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 66/205 (32%), Gaps = 37/205 (18%) Query: 10 SSSFNFLIYGKTGWIG-------------------------GLLGKLCEAQGITYTYGSG 44 S N ++ G G+IG G L G G Sbjct: 2 SQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVG 61 Query: 45 RLQDRQSIVADIESVKPSHV-FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103 + D +V + + + V + A D I TN GT TL + R+ Sbjct: 62 DIAD-AELVDKLAAKADAIVHYAAESHNDNSLNDPSPF-----IHTNFIGTYTLLEAARK 115 Query: 104 KGLVLINYATGCIFE-YDSGHPL---GSGIGFK-EEDTPNFTGSFYSKTKAMVEELLKNY 158 + + +T ++ L G G G K +T S YS TKA + ++K + Sbjct: 116 YDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAW 175 Query: 159 ENVCTLRVRMPISSDLTNPRNFITK 183 ++ + S+ P I K Sbjct: 176 VRSFGVKATISNCSNNYGPYQHIEK 200 >3RUE-A nrPDB Length = 351 Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 52/158 (32%), Gaps = 20/158 (12%) Query: 16 LIYGKTGWIGGLLGKLCEAQGITYT-------YGSGRLQDRQSIVADIESVKPSHVFNAA 68 ++ G + G L E + + T + G ++D + ++ V A Sbjct: 51 VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDHVLHQAAL 110 Query: 69 GVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINY-ATGCIFEYDSGHPLGS 127 G R VD + T TN+ G L + + + Y A+ + P Sbjct: 111 GSVPRSIVDP-----ITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALP--- 162 Query: 128 GIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLR 165 K E+ S Y+ TK + E + Y + Sbjct: 163 ----KVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFK 196 >2C54-A nrPDB Length = 379 Score = 46.2 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 92/264 (34%), Gaps = 43/264 (16%) Query: 10 SSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADI------------- 56 S + I G G+I + + + +G + + + + + D+ Sbjct: 27 SENLKISITGAGGFIASHIARRLKHEG--HYVIASDWKKNEHMTEDMFCDEFHLVDLRVM 84 Query: 57 ESVKPS-----HVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINY 111 E+ HVFN A G + + +S+ + N + + + R G+ Y Sbjct: 85 ENCLKVTEGVDHVFNLAADMG--GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFY 142 Query: 112 ATG-CIFEYDSGHPLGSGIGFKEEDT-PNFTGSFYSKTKAMVEELLKNYENVCTLRVRMP 169 A+ CI+ + + KE D P Y + EEL K+Y + R+ Sbjct: 143 ASSACIYPEFKQLET-TNVSLKESDAWPAEPQDAYGLERLATEELCKHYNKDFGIECRIG 201 Query: 170 ISSDLTNP----------------RNFITKIARYEKVVD--IPNSMTILDELLPISIEMA 211 ++ P R T R+E D S T +DE + + + Sbjct: 202 RFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261 Query: 212 KRNLTGIYNFTNPGVVSHNEILEM 235 K + N + +VS NE+ EM Sbjct: 262 KSDFREPVNIGSDEMVSMNEMAEM 285 >5U9C-A nrPDB Length = 292 Score = 45.1 bits (105), Expect = 4e-05, Method: Composition-based stats. Identities = 53/242 (21%), Positives = 91/242 (37%), Gaps = 31/242 (12%) Query: 8 SSSSSFNFLIYGKTGWIGGLLGKLCEAQG---ITYTYGSGRLQDRQSIVADIESVKPSHV 64 S++ LI G TG +G + + I + L ++I + I + KP + Sbjct: 1 SNAMKRKILITGGTGMLGAYVTSALKDTDYNVIVTERNTLNLSVPEAIFSYITAEKPDVI 60 Query: 65 FNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHP 124 + A +VD CE N T +A + G L+ ++ +F Sbjct: 61 LHFAA---ETDVDLCEREPARAGIYNHLATEQIAQAAKFCGAWLLYLSSSNVFG------ 111 Query: 125 LGSG-IGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCT-----LRVRMPISSDLTNPR 178 G G + + E D P ++Y ++K + E ++N CT +R I Sbjct: 112 -GEGKLSYNELDIP-LPMNYYGRSKLIGESSVRN---ACTNNHLIIRAGWMIGGGPDKDH 166 Query: 179 NFITKIARYEK--------VVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHN 230 F+ KI + K V D S+T +L I + TG +F + G +S Sbjct: 167 KFVGKIIQQIKAGSTSIKAVSDRLGSITSAMQLCNFIIWAINKRHTGTLHFASSGTISRF 226 Query: 231 EI 232 +I Sbjct: 227 DI 228 >1DB3-A nrPDB Length = 372 Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 22/153 (14%) Query: 44 GRLQDRQSIVADIESVKPSHVFN--AAGVTGRPNVDWCESHKVETIRTNVAGTLTLADIC 101 G L D ++ + V+P V+N A + V+ + GTL L + Sbjct: 62 GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAM-----GTLRLLEAI 116 Query: 102 R----EKGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKN 157 R EK +T ++ P ++E TP + S Y+ K + N Sbjct: 117 RFLGLEKKTRFYQASTSELYGLVQEIP-------QKETTPFYPRSPYAVAKLYAYWITVN 169 Query: 158 YENVCTLRVRMPISSDLTNPR---NFIT-KIAR 186 Y + I + +PR F+T KI R Sbjct: 170 YRESYGMYACNGILFNHESPRRGETFVTRKITR 202 >5UZH-A nrPDB Length = 345 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 21/159 (13%) Query: 10 SSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAAG 69 SSSFN TG + L K + G L D ++++ I +KP ++N A Sbjct: 35 SSSFN------TGRV-EHLYKDIHITKAKFKLLYGDLTDTGNLISIIAKIKPDEIYNLAA 87 Query: 70 VTGRPNVDWCESHKVETIRTNVAGTLTLADICR----EKGLVLINYATGCIFEYDSGHPL 125 + +V T + GTL L + R EK +T ++ P Sbjct: 88 ---QSHVKVSFEMPEYTANVDGIGTLRLLEAIRACGLEKKTKFYQASTSELYGLVQEVP- 143 Query: 126 GSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTL 164 ++E TP + S Y+ K ++ NY + Sbjct: 144 ------QKETTPFYPRSPYACAKLYSYWIVVNYREAYNM 176 >1WVG-A nrPDB Length = 359 Score = 43.2 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 7/119 (5%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103 G ++D + + + I KP VF+ A +P V ++T TNV GT+ L + ++ Sbjct: 64 GDIRDFEKLRSSIAEFKPEIVFHMAA---QPLVRLSYEQPIKTYSTNVMGTVHLLETVKQ 120 Query: 104 KGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC 162 G + YD+ + E+ P YS +K E + + N Sbjct: 121 VGNIKAVVNITSDKCYDNR----EWVWGYRENEPMGGYDPYSNSKGCAELVASAFRNSF 175 >2Z95-A nrPDB Length = 345 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 16/124 (12%) Query: 45 RLQDRQSIVADIESVKPSHVFN--AAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICR 102 L + +I+ IE V+P V+N A G + +V+ I G L + + R Sbjct: 60 DLLEFSNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAI-----GVLRILEALR 114 Query: 103 EKGLVLINY--ATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN 160 Y +T +F P + E TP + S Y+ K + NY Sbjct: 115 TVKPDTKFYQASTSEMFGKVQEIP-------QTEKTPFYPRSPYAVAKLFGHWITVNYRE 167 Query: 161 VCTL 164 + Sbjct: 168 AYNM 171 >6AQY-A nrPDB Length = 341 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 10/159 (6%) Query: 2 VADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYG-----SGRLQDRQSIVADI 56 V+D + + L+ G TG G + + + + I + G L+D + Sbjct: 14 VSDQPITLTQDDVILVTGGTGLFGKAVEHIVKKEQIKGKWVFLGSKDGDLRDADACKQPF 73 Query: 57 ESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYA-TGC 115 E +P++V + A G + + KV NV + C + G+ + C Sbjct: 74 EKYRPTYVIHLAAFVGGLFKN--MNFKVSFWLDNVNMNNNILTCCYDFGVKKTISCLSTC 131 Query: 116 IFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEEL 154 +F +P+ E P+F+ + Y+ K M++ L Sbjct: 132 VFPDKIEYPITE--EKLHEGPPHFSNNAYAYAKRMLDML 168 >2HUN-A nrPDB Length = 336 Score = 41.6 bits (96), Expect = 4e-04, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 14/148 (9%) Query: 39 YTYGSGRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLA 98 YT+ G + D + + + V A R + +NV GT TL Sbjct: 56 YTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSP-----EIFLHSNVIGTYTLL 110 Query: 99 DICREKG--LVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLK 156 + R + + ++ +T ++ G E+ S YS TKA + L+ Sbjct: 111 ESIRRENPEVRFVHVSTDEVYGDILK-------GSFTENDRLMPSSPYSATKAASDMLVL 163 Query: 157 NYENVCTLRVRMPISSDLTNPRNFITKI 184 + L + ++ P F K+ Sbjct: 164 GWTRTYNLNASITRCTNNYGPYQFPEKL 191 >1N7G-A nrPDB Length = 381 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 15/150 (10%) Query: 44 GRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103 L D S+ I+ +KP V+N A + + + + T G L L + R Sbjct: 90 ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVAT---GALRLLEAVRS 146 Query: 104 KGL---VLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN 160 + + Y ++ S GS + E TP S Y+ +K NY Sbjct: 147 HTIDSGRTVKY-----YQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYRE 201 Query: 161 VCTLRVRMPISSDLTNPR---NFIT-KIAR 186 L I + +PR NF+T KI R Sbjct: 202 AYGLFACNGILFNHESPRRGENFVTRKITR 231 >1RPN-A nrPDB Length = 335 Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 66/211 (31%), Gaps = 42/211 (19%) Query: 10 SSSFNFLIYGKTGWIGGLLGKLCEAQGITY------------------------TYGSGR 45 S + + L+ G TG G L KL +G Y G Sbjct: 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGD 71 Query: 46 LQDRQSIVADIESVKPSHVFNAAG--VTGRPNVDWCESHKVETIRTNVAGTLTLADICRE 103 + D S+ + +P V+N A G + V+ + G L + R+ Sbjct: 72 MADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGL-----GVTHLLEAIRQ 126 Query: 104 KGLVLINY--ATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV 161 Y +T +F ++E+TP + S Y K + NY Sbjct: 127 FSPETRFYQASTSEMFGLIQA-------ERQDENTPFYPRSPYGVAKLYGHWITVNYRES 179 Query: 162 CTLRVRMPISSDLTNPRNFITKIARYEKVVD 192 L I + +P I + R KV D Sbjct: 180 FGLHASSGILFNHESPLRGIEFVTR--KVTD 208 >3M2P-A nrPDB Length = 311 Score = 35.8 bits (81), Expect = 0.021, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 13/162 (8%) Query: 12 SFNFLIYGKTGWIGGLLGKLCEAQG-----ITYTYGSGRLQDRQSIVADIESVKPSHVFN 66 S + G TG++G + + + G +T + G+ + D + V+D + N Sbjct: 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLN 61 Query: 67 AAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCI-FEYDSGHPL 125 K+ N T L D C E + I YA+ + ++ P Sbjct: 62 DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPW 121 Query: 126 GSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVR 167 KE P+ Y +K E + Y L ++ Sbjct: 122 NE----KELPLPDLM---YGVSKLACEHIGNIYSRKKGLCIK 156 >2Q1T-A nrPDB Length = 377 Score = 35.8 bits (81), Expect = 0.024, Method: Composition-based stats. Identities = 34/191 (17%), Positives = 60/191 (31%), Gaps = 41/191 (21%) Query: 6 NGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGI---------------------TYTYGSG 44 N S ++ N ++ G G++G L K G+ + Sbjct: 26 NASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSET 85 Query: 45 RLQDRQSIVADIESVKPSHVFNAAGVTGR--PNVDWCESHKVETIRTNVAGTLTLADICR 102 + D + + + +VF+ A G D H+ N TL L + + Sbjct: 86 SITDDALLASLQDEYD--YVFHLATYHGNQSSIHDPLADHE-----NNTLTTLKLYERLK 138 Query: 103 -EKGLVLINY-ATGCIFEYDSGHPLGSGIGFKEEDTPNFTGS--FYSKTKAMVEELLKNY 158 K L + Y A GC + +E D + + YS +K E Y Sbjct: 139 HFKRLKKVVYSAAGCSIAEKT---FDDAKATEETDIVSLHNNDSPYSMSKIFGEF----Y 191 Query: 159 ENVCTLRVRMP 169 + ++P Sbjct: 192 SVYYHKQHQLP 202 >4EJ0-A nrPDB Length = 342 Score = 35.5 bits (80), Expect = 0.030, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 23/157 (14%) Query: 15 FLIYGKTGWIGGLLGKLCEAQGITY--------------TYGSGRLQDRQSIVADIESVK 60 ++ G G+IG L K +G T + D +E Sbjct: 15 LIVTGAAGFIGANLVKALNERGETRIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVERFA 74 Query: 61 PSHVFNAAGVTGR-PNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEY 119 V D E+ + N + + D C +G + ++ I+ Sbjct: 75 RGDFGKVRAVFHEGACSDTMETDGRYMMDNNFRYSRAVLDACLAQGAQFLYASSAAIYGG 134 Query: 120 DSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLK 156 S F EE + Y +K + +++++ Sbjct: 135 SSR--------FVEEREVEAPLNVYGYSKFLFDQVIR 163 >1EQ2-A nrPDB Length = 310 Score = 34.7 bits (78), Expect = 0.049, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 48/158 (30%), Gaps = 23/158 (14%) Query: 15 FLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVA----DIESVKPSHVFNAAGV 70 ++ G G+IG + K +GIT L+D V +I F + Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIM 61 Query: 71 TGRPNVD------------WCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFE 118 G D E + N + L C E+ + + ++ + Sbjct: 62 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG 121 Query: 119 YDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLK 156 G F E + Y +K + +E ++ Sbjct: 122 -------GRTSDFIESREYEKPLNVYGYSKFLFDEYVR 152 >2X86-A nrPDB Length = 357 Score = 33.2 bits (74), Expect = 0.15, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 23/158 (14%) Query: 15 FLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVA----DIESVKPSHVFNAAGV 70 ++ G G+IG + K +GIT L+D V +I F + Sbjct: 49 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIM 108 Query: 71 TGRPNVD------------WCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFE 118 G D E + N + L C E+ + + ++ + Sbjct: 109 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG 168 Query: 119 YDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLK 156 G F E + + +K + +E ++ Sbjct: 169 -------GRTSDFIESREYEKPLNVFGYSKFLFDEYVR 199 >4G5H-A nrPDB Length = 363 Score = 32.8 bits (73), Expect = 0.18, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 41 YGSGRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADI 100 + G ++D QS+ + V +VF+AA + P+ CE VE ++TN+ GT + Sbjct: 77 FYIGDVRDSQSVETAMRDVD--YVFHAAALKQVPS---CEFFPVEAVKTNIIGTENVLQS 131 Query: 101 CREKGLVLINYATGCIFEYD 120 + + + + Y Sbjct: 132 AIHQNVKKVICLSTDKAAYP 151 >4B4O-A nrPDB Length = 298 Score = 30.8 bits (68), Expect = 0.79, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 15/127 (11%) Query: 15 FLIYGKTGWIGGLLGKLCEAQGITYTYGS-----GRLQDRQSIVADIESVKPSHVFNAAG 69 L+ G TG+IG L +L A+G T S GR+ + + + S + V A Sbjct: 3 VLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGRITWDELAASGLPSCD-AAVNLAGE 61 Query: 70 VTGRPNVDWCESHKVETIRTNVAGTLTLADICRE-----KGLVLIN----YATGCIFEYD 120 P W E+ + E + + + T LA + K VL+ Y EYD Sbjct: 62 NILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYD 121 Query: 121 SGHPLGS 127 P G Sbjct: 122 EDSPGGD 128 >4J2O-A nrPDB Length = 363 Score = 30.8 bits (68), Expect = 0.82, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Query: 41 YGSGRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADI 100 + G ++D SI+ V ++++AA + P+ CE H +E ++TNV GT + + Sbjct: 75 FYIGDVRDYNSILNATRGVD--YIYHAAALKQVPS---CEFHPMEAVKTNVLGTENVLEA 129 >3EH1-A nrPDB Length = 751 Score = 30.5 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 10/89 (11%) Query: 179 NFITKIARYEKVVDIPNSMTILDELLPISIEMAK---------RNLTGIYNFTNPGVVSH 229 NFI + Y IP MT L EL +S E A+ R L+ I + + Sbjct: 661 NFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAK 720 Query: 230 NEILE-MYRDYIDPSFTWKNFTLEEQAKV 257 E + + D + +F++ F L Q ++ Sbjct: 721 AEFFQHLIEDRTEAAFSYYEFLLHVQQQI 749 >1LU9-A nrPDB Length = 287 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 1/55 (1%) Query: 1 MVADANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVAD 55 +V A G S ++ TG +G L +G GR D+ AD Sbjct: 108 LVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLC-GRKLDKAQAAAD 161 >2GN9-A nrPDB Length = 344 Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 25/120 (20%) Query: 41 YGSGRLQDRQSIVADIESVKPSHVFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADI 100 + G ++D + + +E V +AA + P E + +E I+TN+ G + + Sbjct: 74 FFIGDVRDLERLNYALEGVD--ICIHAAALKHVPI---AEYNPLECIKTNIMGASNVINA 128 Query: 101 CREKGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN 160 C + + + + + P + Y TK ++L + N Sbjct: 129 CLKNAISQVI-----------------ALSTDKAANPI---NLYGATKLCSDKLFVSANN 168 >3ZDS-A nrPDB Length = 433 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%) Query: 169 PISSD-LTNPRNFITKIARYEK 189 PI S+ L NPR+F+T +A YE+ Sbjct: 213 PIGSNGLANPRDFLTPVAHYEE 234 >6C6P-A nrPDB Length = 458 Score = 28.9 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 1/70 (1%) Query: 7 GSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFN 66 G+SS + +I G +G L + G T L++ IV + HV Sbjct: 1 GTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPDRIVGEFLQPGGYHVLK 60 Query: 67 AAGVTGRPNV 76 G+ G Sbjct: 61 DLGL-GDTVE 69 >2RDY-A nrPDB Length = 803 Score = 28.9 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 3/41 (7%) Query: 5 ANGSSSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGR 45 ANG ++ N YG GW+ L +G G Sbjct: 403 ANGKKTAEIN---YGARGWVAHHNADLWGQTAPVGDFGHGD 440 >3L76-A nrPDB Length = 600 Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Query: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGV-VSHNEILEMYRDYIDPSFTW 246 E D+P +T L+P + MA+ + + G V H +E+ R+Y P Sbjct: 172 EIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVR 231 Query: 247 KNFTLEEQAKVIVAPRSNNEL 267 +++ E KV+ P N L Sbjct: 232 SSWSDEPGTKVVAPPVQNRSL 252 >5D0Q-A nrPDB Length = 810 Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 13/142 (9%) Query: 103 EKGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC 162 + +ATG FE G + + ++ P +S K++ +++LK Sbjct: 59 ISNTIRALFATG-NFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEAS 117 Query: 163 TLRV-----RMPISSDLTNPRNFITKIARYEK-----VVDIPNSMTILDELLP--ISIEM 210 +RV R I+ +F + +Y V +P + L + +S E+ Sbjct: 118 GVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEI 177 Query: 211 AKRNLTGIYNFTNPGVVSHNEI 232 + N+ G + FT ++SH ++ Sbjct: 178 QQINIVGNHAFTTDELISHFQL 199 >3EFC-A nrPDB Length = 395 Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 13/142 (9%) Query: 103 EKGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC 162 + +ATG FE G + + ++ P +S K++ +++LK Sbjct: 42 ISNTIRALFATG-NFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEAS 100 Query: 163 TLRV-----RMPISSDLTNPRNFITKIARYEK-----VVDIPNSMTILDELLP--ISIEM 210 +RV R I+ +F + +Y V +P + L + +S E+ Sbjct: 101 GVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEI 160 Query: 211 AKRNLTGIYNFTNPGVVSHNEI 232 + N+ G + FT ++SH ++ Sbjct: 161 QQINIVGNHAFTTDELISHFQL 182 >2QCZ-A nrPDB Length = 335 Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 13/142 (9%) Query: 103 EKGLVLINYATGCIFEYDSGHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVC 162 + +ATG FE G + + ++ P +S K++ +++LK Sbjct: 43 ISNTIRALFATG-NFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEAS 101 Query: 163 TLRV-----RMPISSDLTNPRNFITKIARYEK-----VVDIPNSMTILDELLP--ISIEM 210 +RV R I+ +F + +Y V +P + L + +S E+ Sbjct: 102 GVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEI 161 Query: 211 AKRNLTGIYNFTNPGVVSHNEI 232 + N+ G + FT ++SH ++ Sbjct: 162 QQINIVGNHAFTTDELISHFQL 183 >3HFS-A nrPDB Length = 338 Score = 28.1 bits (61), Expect = 4.4, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 28/122 (22%) Query: 17 IYGKTGWIGGLLGKLCEAQGITYTYGSGR------------LQD-------RQSIVADIE 57 + G TG++ LL KL +G LQ+ R + ++ Sbjct: 14 VVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELS 73 Query: 58 SVKPSH----VFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADIC-REKGLVLINYA 112 P VF+ A + D + + I+ + G + + C R K + + Sbjct: 74 FEAPIAGCDFVFHVATPVHFASEDP----ENDMIKPAIQGVVNVMKACTRAKSVKRVILT 129 Query: 113 TG 114 + Sbjct: 130 SS 131 >1ND3-A nrPDB Length = 285 Score = 27.8 bits (60), Expect = 6.4, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 229 HNEILEMYRDYIDPSFTWKNFTLEEQAKV 257 H +L++ +Y D SFT N L+E A++ Sbjct: 78 HESVLDIVDNYNDQSFTKWNINLQEMAQI 106 >1VKH-A nrPDB Length = 273 Score = 27.8 bits (60), Expect = 6.4, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 128 GIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARY 187 G E+TPN + K+M E VC + +S ++TNPRN ++ Sbjct: 50 GAWNDPENTPNDFNQLANTIKSMDTE-----STVCQYSIEYRLSPEITNPRNLYDAVSNI 104 Query: 188 EKVV 191 ++V Sbjct: 105 TRLV 108 >2IWK-A nrPDB Length = 642 Score = 27.8 bits (60), Expect = 6.9, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 193 IPNSMTILDELLPISIEMAKR---NLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNF 249 +PN ++ D P+ E K+ + I +T + N++ +Y + PSF+ +F Sbjct: 504 LPNIRSVWDRNDPLWAETRKQAEADEVDIDEWTEAVIRDGNKV-RVYMTSVAPSFSQPSF 562 Query: 250 TLEEQAKVIVAPRSNNELD 268 T++E +V V + +E+D Sbjct: 563 TVKEGDEVTVIVTNLDEID 581 >3S61-A nrPDB Length = 463 Score = 27.4 bits (59), Expect = 7.1, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 32/97 (32%), Gaps = 1/97 (1%) Query: 64 VFNAAGVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGH 123 VF+ + C S K I + G + A+ + + I + Sbjct: 207 VFHHSQYLEHMAKQPCSSGKPMKIAI-IGGGQSAAEAFIDLNDSYPSVQADMILRASALK 265 Query: 124 PLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN 160 P E P FT YS+ A E LL+ Y N Sbjct: 266 PADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.131 0.355 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,356,515 Number of Sequences: 36641 Number of extensions: 453172 Number of successful extensions: 1465 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 53 Number of HSP's that attempted gapping in prelim test: 1379 Number of HSP's gapped (non-prelim): 92 length of query: 301 length of database: 10,336,785 effective HSP length: 97 effective length of query: 204 effective length of database: 6,782,608 effective search space: 1383652032 effective search space used: 1383652032 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 59 (27.4 bits)