BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9HD40 (501 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3HL2-A nrPDB 1042 0.0 3BC8-A nrPDB 865 0.0 2Z67-A nrPDB 229 2e-60 2C44-A nrPDB 37 0.021 3IF2-A nrPDB 33 0.32 3CF4-G nrPDB 31 1.0 6EM4-A nrPDB 31 1.1 2E7J-A nrPDB 31 1.2 3ZXU-A nrPDB 30 2.4 6ENZ-A nrPDB 30 3.0 5VBF-A nrPDB 30 3.3 5X45-A nrPDB 29 3.6 3V3T-A nrPDB 28 6.9 3IBV-A nrPDB 28 7.7 >3HL2-A nrPDB Length = 501 Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/501 (100%), Positives = 501/501 (100%) Query: 1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAI 60 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAI Sbjct: 1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAI 60 Query: 61 MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS 120 MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS Sbjct: 61 MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS 120 Query: 121 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI 180 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI Sbjct: 121 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI 180 Query: 181 TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV 240 TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV Sbjct: 181 TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV 240 Query: 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND Sbjct: 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 Query: 301 SFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN 360 SFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN Sbjct: 301 SFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN 360 Query: 361 ERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFR 420 ERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFR Sbjct: 361 ERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFR 420 Query: 421 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTEDVD 480 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTEDVD Sbjct: 421 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTEDVD 480 Query: 481 IEEMALKLDNVLLDTYQDASS 501 IEEMALKLDNVLLDTYQDASS Sbjct: 481 IEEMALKLDNVLLDTYQDASS 501 >3BC8-A nrPDB Length = 450 Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/449 (90%), Positives = 437/449 (97%) Query: 19 RQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGR 78 RQGCEARR+HEHLIRLLLE+GKCPE+GWDESTLELFLHELA+MDSNNFLGNCGVGEREGR Sbjct: 1 RQGCEARRAHEHLIRLLLEQGKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGR 60 Query: 79 VASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDIIKLAGVHTVANCF 138 VASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVL++IKLAGVH+VA+CF Sbjct: 61 VASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVASCF 120 Query: 139 VVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDEL 198 VVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM+TAGFEPVVIENVLEGDEL Sbjct: 121 VVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDEL 180 Query: 199 RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQ 258 RTDLKAVEAK+QELGP+ ILC+HSTT+CFAPRVPDRLEELAVICANYDIPH+VNNAYG+Q Sbjct: 181 RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQ 240 Query: 259 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASP 318 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFN+ FIQ+ISKMYPGRASASP Sbjct: 241 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASP 300 Query: 319 SLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLK 378 SLDVLITLLSLG +GY+KLLKERKEMF YLS Q+KKL+EA+NERLL TPHNPISLAMTLK Sbjct: 301 SLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLK 360 Query: 379 TLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAAS 438 T+D H DKAVTQLGSMLFTRQVSGAR VPLG++QTVSG+TFRGFMSH +NYPCAYLNAA+ Sbjct: 361 TIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA 420 Query: 439 AIGMKMQDVDLFIKRLDRCLKAVRKERSK 467 AIGMKMQDVDLFIKRLD+CL VRKE+++ Sbjct: 421 AIGMKMQDVDLFIKRLDKCLNIVRKEQTR 449 >2Z67-A nrPDB Length = 456 Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 141/425 (33%), Positives = 238/425 (56%), Gaps = 32/425 (7%) Query: 40 KCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSG 99 K PENG D+ ++LFL L++MD++ + +GERE R S + F HGIGRSG Sbjct: 57 KIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSG 116 Query: 100 DISAVQPKAAGSSLLNKITNSLVLDIIKLAG--VHTVANCFVVPMATGMSLTLCFLTLRH 157 ++ QPKA+G+S++ +TN ++ K G VH +A P++TGMS++LC L+ Sbjct: 117 NLVDPQPKASGASIMYALTNKILESFFKQLGLNVHAIA----TPISTGMSISLC-LSAAR 171 Query: 158 KRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQ---ELGP 214 K+ + +I+P KS K++ G ++E VL+GD + ++ +E ++ ELG Sbjct: 172 KKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGN 231 Query: 215 DCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGR 274 C+ ST + F PR D + E+A IC NYDIPHI+N AY +Q++ + +++ + R Sbjct: 232 RP--CVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-R 288 Query: 275 IDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGY 334 +DA V S DKN + P+GG ++ + FI+EIS YPGRASA+P ++ L++LLS+GS Y Sbjct: 289 VDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNY 348 Query: 335 KKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSM 394 +L+K +K L + LS+ + L +PI+ +++ + ++ + Sbjct: 349 LELVKNQKNSKKLLDELLNDLSKKTGGKFLDV-ESPIASCISVNS-------DPVEIAAK 400 Query: 395 LFTRQVSGARVVPLGSMQTVS-GYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKR 453 L+ +V+G R G +T G + G +H Y+ +AIG++ +D+ + + Sbjct: 401 LYNLRVTGPR----GIKKTDHFGNCYLGTYTHD------YIVMNAAIGVRTEDIVNSVSK 450 Query: 454 LDRCL 458 L++ L Sbjct: 451 LEKIL 455 >2C44-A nrPDB Length = 471 Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 16/118 (13%) Query: 201 DLKAVEAKVQELGPD----CILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVN---- 252 DL+ +E ++E+GP+ + I S ++ P L+ + I YDIP +++ Sbjct: 172 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231 Query: 253 --NAYGVQSSKCMH---LIQQGAR--VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFI 303 NAY ++ + + I+Q R D S K+ MVP+GG ++ +DSF Sbjct: 232 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGG-LLCMKDDSFF 288 >3IF2-A nrPDB Length = 444 Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%) Query: 186 PVVIENVLEGDE----LRTDLKAVE--AKVQELGPDCILCIHSTTSCFAPRVPDRLEELA 239 P + E +G+E R D +A+E ++E I C T + + LA Sbjct: 173 PHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLA 232 Query: 240 VICANYDIPHIVNNAYGV 257 I YDIP I++NAYG+ Sbjct: 233 EIAKRYDIPLIIDNAYGM 250 >3CF4-G nrPDB Length = 170 Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 17/99 (17%) Query: 120 SLVLDIIKLAGVHTVANCFVVPMA-TGMSLTLCFLTLRHKRPKAKYI------------I 166 +L LD L V ++ +P+A TG SL + L K AKYI Sbjct: 43 TLALDPELLDRVVKISKAANIPIAATGSSLAV----LADKDVDAKYINAHMLGFYLTDPK 98 Query: 167 WPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAV 205 WP +D + +IT GF+ I VL + ++LK + Sbjct: 99 WPGLDGNGNYDMIITIGFKKFYINQVLSAAKNFSNLKTI 137 >6EM4-A nrPDB Length = 291 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 7/50 (14%) Query: 26 RSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGER 75 R H+ L L L K P NG T++ ++ L MD NF GNC G R Sbjct: 92 RKHQDLY-LWLSK---PPNG---PTIKFYIQNLHTMDELNFTGNCLKGSR 134 >2E7J-A nrPDB Length = 371 Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 16/61 (26%) Query: 231 VPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPV 290 +PD ++++A +C+ YD+P +VN AY +GR+ ++ + +F+V Sbjct: 163 LPD-VKKIAKVCSEYDVPLLVNGAYA---------------IGRMPVSLKEIGADFIVGS 206 Query: 291 G 291 G Sbjct: 207 G 207 >3ZXU-A nrPDB Length = 296 Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 3/105 (2%) Query: 194 EGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNN 253 E + ++ D++A+E ++Q + I HS S ++PD ++ + N + +++ Sbjct: 6 ETEAVQQDIEALEREIQTIKIQ-IANAHSGASKDEVKIPDAYKQF--LSENINFSNLMRK 62 Query: 254 AYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGF 298 S + + G G+I S+ NF V G +AGF Sbjct: 63 DENTTLSINLSPRKPGTTTGQIQGIDSSIRSNFGVSSGHNEVAGF 107 >6ENZ-A nrPDB Length = 530 Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust. Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 80 ASALVARRHYRFIHGIGRSGDIS 102 SALV+R+H R +HGI R+ ++ Sbjct: 315 GSALVSRKHRRLLHGIHRADSVA 337 >5VBF-A nrPDB Length = 478 Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 13/131 (9%) Query: 178 SMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP-DRLE 236 +M G PV++ + D R K + G C+ S T F R DR Sbjct: 249 TMELGGHAPVLV--CADADVERAAAMLAAYKFRNAGQVCV----SPTRFFVQRAAFDRF- 301 Query: 237 ELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFV-QSLDKNFMVPVGGAII 295 +CA D + YG+ + M + RV IDAFV + K + GG + Sbjct: 302 ----VCAYLDAVGTIRVGYGLDAGVTMGPLAHARRVDEIDAFVADATAKGAQIATGGMRL 357 Query: 296 AGFNDSFIQEI 306 G F + Sbjct: 358 PGPGHYFAPTV 368 >5X45-A nrPDB Length = 139 Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Query: 198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGV 257 L DL+ V GPD I C T C+ R DR V C ++D I + Y Sbjct: 33 LTADLQVDSTNVP--GPDVIPCCDCTAGCYYSRSKDRY--FPVECVSHDWYEIQESGYYP 88 Query: 258 QSSKCMHLIQQG 269 + + LI +G Sbjct: 89 KHIQYNLLIGEG 100 >3V3T-A nrPDB Length = 360 Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 38/197 (19%) Query: 324 ITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKT---- 379 I++ L +N +K KE F+ L N +SE++ E ++ + IS +T+K Sbjct: 159 ISIYLLDNNKREKESDINKE-FATLFNDFMNMSESHAEGVVD--EDEISKLLTMKKSNVI 215 Query: 380 --LDEHRDKAVT---QLGSMLFTRQ---------VSGARVVPLGSMQTVSGY---TFRGF 422 D+ D V L +F +S RVV + +++++ GY TF+G+ Sbjct: 216 LEFDDKEDIQVALAKSLKESIFAEYTTNTCEFMGISTTRVVDVEAIKSIVGYPRRTFKGY 275 Query: 423 MSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESD--------DNYD 474 S N + A+ I + V + + ++ +K R+ SK + D+ D Sbjct: 276 NSKKN------IVVATGIEPQKTTVQMMNEIIEDKMKQRREVTSKSENMIIEPIALDDED 329 Query: 475 KTEDVDIEEMALKLDNV 491 + E + +DNV Sbjct: 330 NKSVISSNEKEISIDNV 346 >3IBV-A nrPDB Length = 980 Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 450 FIKRL-DRCLKAVRKERSKESDDNYDKTEDVDIEEMALKL 488 F+K L + +K ++ + S+E DD+ D E+ + +EM KL Sbjct: 379 FLKSLLEAIIKKMKYDESQEWDDDPDSEEEAEFQEMRKKL 418 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3HL2-A nrPDB 914 0.0 3BC8-A nrPDB 811 0.0 2Z67-A nrPDB 583 e-167 Sequences not found previously or not previously below threshold: 3MC6-C nrPDB 47 2e-05 2C44-A nrPDB 44 2e-04 3IF2-A nrPDB 40 0.003 4Q6R-A nrPDB 38 0.009 2E7J-A nrPDB 37 0.019 6JRL-A nrPDB 35 0.070 5W1B-A nrPDB 33 0.37 3ELE-A nrPDB 32 0.46 4IM4-A nrPDB 32 0.70 4JIS-A nrPDB 32 0.88 5VBF-A nrPDB 31 0.99 3IBV-A nrPDB 30 1.7 5JH9-A nrPDB 30 1.9 6H23-A nrPDB 29 5.1 6BDY-A nrPDB 29 5.5 3IV9-A nrPDB 29 5.5 6EM4-A nrPDB 28 7.4 1TG6-A nrPDB 28 9.1 >3HL2-A nrPDB Length = 501 Score = 914 bits (2361), Expect = 0.0, Method: Composition-based stats. Identities = 501/501 (100%), Positives = 501/501 (100%) Query: 1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAI 60 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAI Sbjct: 1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAI 60 Query: 61 MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS 120 MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS Sbjct: 61 MDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNS 120 Query: 121 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI 180 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI Sbjct: 121 LVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI 180 Query: 181 TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV 240 TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV Sbjct: 181 TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV 240 Query: 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND Sbjct: 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND 300 Query: 301 SFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN 360 SFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN Sbjct: 301 SFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN 360 Query: 361 ERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFR 420 ERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFR Sbjct: 361 ERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFR 420 Query: 421 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTEDVD 480 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTEDVD Sbjct: 421 GFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTEDVD 480 Query: 481 IEEMALKLDNVLLDTYQDASS 501 IEEMALKLDNVLLDTYQDASS Sbjct: 481 IEEMALKLDNVLLDTYQDASS 501 >3BC8-A nrPDB Length = 450 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 405/449 (90%), Positives = 437/449 (97%) Query: 19 RQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGR 78 RQGCEARR+HEHLIRLLLE+GKCPE+GWDESTLELFLHELA+MDSNNFLGNCGVGEREGR Sbjct: 1 RQGCEARRAHEHLIRLLLEQGKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGR 60 Query: 79 VASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDIIKLAGVHTVANCF 138 VASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVL++IKLAGVH+VA+CF Sbjct: 61 VASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLNVIKLAGVHSVASCF 120 Query: 139 VVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDEL 198 VVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM+TAGFEPVVIENVLEGDEL Sbjct: 121 VVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDEL 180 Query: 199 RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQ 258 RTDLKAVEAK+QELGP+ ILC+HSTT+CFAPRVPDRLEELAVICANYDIPH+VNNAYG+Q Sbjct: 181 RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQ 240 Query: 259 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASP 318 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFN+ FIQ+ISKMYPGRASASP Sbjct: 241 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASP 300 Query: 319 SLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLK 378 SLDVLITLLSLG +GY+KLLKERKEMF YLS Q+KKL+EA+NERLL TPHNPISLAMTLK Sbjct: 301 SLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLK 360 Query: 379 TLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAAS 438 T+D H DKAVTQLGSMLFTRQVSGAR VPLG++QTVSG+TFRGFMSH +NYPCAYLNAA+ Sbjct: 361 TIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA 420 Query: 439 AIGMKMQDVDLFIKRLDRCLKAVRKERSK 467 AIGMKMQDVDLFIKRLD+CL VRKE+++ Sbjct: 421 AIGMKMQDVDLFIKRLDKCLNIVRKEQTR 449 >2Z67-A nrPDB Length = 456 Score = 583 bits (1502), Expect = e-167, Method: Composition-based stats. Identities = 141/425 (33%), Positives = 238/425 (56%), Gaps = 32/425 (7%) Query: 40 KCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSG 99 K PENG D+ ++LFL L++MD++ + +GERE R S + F HGIGRSG Sbjct: 57 KIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSG 116 Query: 100 DISAVQPKAAGSSLLNKITNSLVLDIIKLAG--VHTVANCFVVPMATGMSLTLCFLTLRH 157 ++ QPKA+G+S++ +TN ++ K G VH +A P++TGMS++LC L+ Sbjct: 117 NLVDPQPKASGASIMYALTNKILESFFKQLGLNVHAIA----TPISTGMSISLC-LSAAR 171 Query: 158 KRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQ---ELGP 214 K+ + +I+P KS K++ G ++E VL+GD + ++ +E ++ ELG Sbjct: 172 KKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGN 231 Query: 215 DCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGR 274 C+ ST + F PR D + E+A IC NYDIPHI+N AY +Q++ + +++ + R Sbjct: 232 RP--CVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY-R 288 Query: 275 IDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGY 334 +DA V S DKN + P+GG ++ + FI+EIS YPGRASA+P ++ L++LLS+GS Y Sbjct: 289 VDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNY 348 Query: 335 KKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSM 394 +L+K +K L + LS+ + L +PI+ +++ + ++ + Sbjct: 349 LELVKNQKNSKKLLDELLNDLSKKTGGKFLDV-ESPIASCISVNS-------DPVEIAAK 400 Query: 395 LFTRQVSGARVVPLGSMQTVS-GYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKR 453 L+ +V+G R G +T G + G +H Y+ +AIG++ +D+ + + Sbjct: 401 LYNLRVTGPR----GIKKTDHFGNCYLGTYTHD------YIVMNAAIGVRTEDIVNSVSK 450 Query: 454 LDRCL 458 L++ L Sbjct: 451 LEKIL 455 >3MC6-C nrPDB Length = 497 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 86/245 (35%), Gaps = 34/245 (13%) Query: 147 SLTLCFLTLR-----HKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTD 201 SL L L+ + H+ II P K+ G + +E L+ + D Sbjct: 138 SLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVE--LDPTTYQVD 195 Query: 202 LKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYG----- 256 L KV++ + + + F + D +E L I Y +P V++ G Sbjct: 196 L----GKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVS 251 Query: 257 -VQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQE---ISKMYPG 312 ++ + +L RV + + K P G ++I N ++ + G Sbjct: 252 FMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTG 311 Query: 313 RASASP----------SLDVLITLLSLGSNGY----KKLLKERKEMFSYLSNQIKKLSEA 358 SP + T++++G NGY ++++ + Y+ I L Sbjct: 312 GLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIM 371 Query: 359 YNERL 363 N R Sbjct: 372 GNPRY 376 >2C44-A nrPDB Length = 471 Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 15/117 (12%) Query: 201 DLKAVEAKVQELGPDCILCIHSTTSCFA----PRVPDRLEELAVICANYDIPHIVNNAYG 256 DL+ +E ++E+GP+ + I +T + + P L+ + I YDIP ++++A Sbjct: 172 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 231 Query: 257 VQSSKCMHLIQQGAR-----------VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSF 302 +++ + + + D S K+ MVP+GG + + F Sbjct: 232 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFF 288 >3IF2-A nrPDB Length = 444 Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 6/83 (7%) Query: 181 TAGFEPVVIENVLEGDE----LRTDLKAVEA--KVQELGPDCILCIHSTTSCFAPRVPDR 234 A P + E +G+E R D +A+E ++E I C T + Sbjct: 168 FAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEE 227 Query: 235 LEELAVICANYDIPHIVNNAYGV 257 + LA I YDIP I++NAYG+ Sbjct: 228 MAHLAEIAKRYDIPLIIDNAYGM 250 >4Q6R-A nrPDB Length = 511 Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 32/243 (13%) Query: 158 KRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCI 217 K K I+ P+ + K+ G + V + + D++A+ + Sbjct: 171 KGIKTPEIVAPQSAHAAFNKAASYFGMKIVRVPLT---KMMEVDVRAMRRAI----SRNT 223 Query: 218 LCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQ------GAR 271 + +T F V D + E+A + Y IP V+ G M R Sbjct: 224 AMLVCSTPQFPHGVIDPVPEVAKLAVKYKIPLHVDACLGGFLIVFMEKAGYPLEHPFDFR 283 Query: 272 VGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQE---ISKMYPGRASASPSL-------- 320 V + + K P G +++ + + + + G ASP++ Sbjct: 284 VKGVTSISADTHKYGYAPKGSSLVLYSDKKYRNYQFFVDTDWQGGIYASPTIAGSRPGGI 343 Query: 321 --DVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLK 378 L+ G NGY + K+ + +L ++++ + + + NP + L Sbjct: 344 SAACWAALMHFGENGYVEATKQIIKTARFLKSELENI------KGIFVFGNPQLSVIALG 397 Query: 379 TLD 381 + D Sbjct: 398 SRD 400 >2E7J-A nrPDB Length = 371 Score = 37.0 bits (84), Expect = 0.019, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 18/24 (75%) Query: 234 RLEELAVICANYDIPHIVNNAYGV 257 ++++A +C+ YD+P +VN AY + Sbjct: 165 DVKKIAKVCSEYDVPLLVNGAYAI 188 >6JRL-A nrPDB Length = 510 Score = 35.0 bits (79), Expect = 0.070, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 10/107 (9%) Query: 155 LRHKRPKAKYIIWPRIDQKSCF-KSMITAGFEPVVI----ENVLEGDELRTDLKAVEAKV 209 L + + + + SC K+ + A ++ + VL GD LR ++ A Sbjct: 174 LSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAA- 232 Query: 210 QELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYG 256 G ++C+ +T D +E L+ +C + + V+ AY Sbjct: 233 ---GRIPVICV-ATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYA 275 >5W1B-A nrPDB Length = 467 Score = 32.7 bits (73), Expect = 0.37, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 15/116 (12%) Query: 201 DLKAVEAKVQELGPDCILCIHSTTSCFA----PRVPDRLEELAVICANYDIPHIVNNAYG 256 D+K ++ + + G D I+ I ST +C + P L+E+ I + I ++++A Sbjct: 168 DIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARF 227 Query: 257 VQSSKCMHLIQQGAR-----------VGRIDAFVQSLDKNFMVPVGGAIIAGFNDS 301 +++ + + DA S K+ ++ +GG + N+ Sbjct: 228 CENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEE 283 >3ELE-A nrPDB Length = 398 Score = 32.4 bits (72), Expect = 0.46, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 4/80 (5%) Query: 130 GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVI 189 G H A+ + M SL++CF L I P + F + AG ++ Sbjct: 94 GTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVF--VNAAG--ARLV 149 Query: 190 ENVLEGDELRTDLKAVEAKV 209 E + + + D A+E ++ Sbjct: 150 EVPADTEHFQIDFDALEERI 169 >4IM4-A nrPDB Length = 336 Score = 32.0 bits (71), Expect = 0.70, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 7/128 (5%) Query: 320 LDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNE-RLLHTPH--NPISLAMT 376 L V+ T+ + G N K+ + + L + L N+ R++ + H +P AM Sbjct: 169 LAVVNTIRASGGNNDKRFILVPTNAATGLDVALNDLVIPNNDSRVIVSIHAYSPYFFAMD 228 Query: 377 LK-TLDEHRDKAVTQLGSML---FTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCA 432 + T D L S L + R V R V +G T+ ++H +Y Sbjct: 229 VNGTSYWGSDYDKASLTSELDAIYNRFVKNGRAVIIGEFGTIDKNNLSSRVAHAEHYARE 288 Query: 433 YLNAASAI 440 ++ A+ Sbjct: 289 AVSRGIAV 296 >4JIS-A nrPDB Length = 247 Score = 31.6 bits (70), Expect = 0.88, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 19/82 (23%) Query: 264 HLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK---MYPGRASASPSL 320 I + G +D + ++D IIA + FI +I MY G+ S + Sbjct: 126 ENIDAVLQYGAVDTVISAID---------TIIASEDQEFISDIPVRDNMYQGQTPQSFRI 176 Query: 321 DVLITLLSLGSNGYKKLLKERK 342 L+ L Y KL E+K Sbjct: 177 SKLVEL-------YNKLSDEQK 191 >5VBF-A nrPDB Length = 478 Score = 31.2 bits (69), Expect = 0.99, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 83/254 (32%), Gaps = 36/254 (14%) Query: 178 SMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP-DRLE 236 +M G PV++ + D R K + G C+ S T F R DR Sbjct: 249 TMELGGHAPVLV--CADADVERAAAMLAAYKFRNAGQVCV----SPTRFFVQRAAFDRF- 301 Query: 237 ELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQ-SLDKNFMVPVGGAII 295 +CA D + YG+ + M + RV IDAFV + K + GG + Sbjct: 302 ----VCAYLDAVGTIRVGYGLDAGVTMGPLAHARRVDEIDAFVADATAKGAQIATGGMRL 357 Query: 296 AGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 G PG A + LG +L+ + L Sbjct: 358 PG-------------PGHYFAPTVV--------LGPTRDTRLMNDEPFGPIVGIVPFDDL 396 Query: 356 SEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVS 415 +A E P S A T + HR + G + G +P G ++ S Sbjct: 397 DDALAEAN-RLPFGLASYAFTTSARNAHRISRALEAGMVNINHFGMGPAEIPFGGVK-DS 454 Query: 416 GYTFRGFMSHTNNY 429 G+ G M + Y Sbjct: 455 GFGSEGGMEAFDGY 468 >3IBV-A nrPDB Length = 980 Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 454 LDRCLKAVRKERSKESDDNYDKTEDVDIEEMALKLDNVLLDTYQDASS 501 L+ +K ++ + S+E DD+ D E+ + +EM KL + DT S Sbjct: 384 LEAIIKKMKYDESQEWDDDPDSEEEAEFQEMRKKL-KIFQDTINSIDS 430 >5JH9-A nrPDB Length = 516 Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 37/221 (16%) Query: 227 FAPRVPDRLEE----LAVICANYDI----PHIVNNAYGVQSSKCMHLIQQGARVGRIDAF 278 FAPR+ DRL +A+IC D+ + + + + L +QGA+ G +++ Sbjct: 300 FAPRLDDRLCSFAAMIALICYAKDVNTEESDLFSTVTLYDNEEIGSLTRQGAKGGLLESV 359 Query: 279 VQSLDKNFM-VPVGGAIIAGFNDSFIQEISKMY-PGRASAS-----PSLDVLITLLSLGS 331 V+ F PV + + +++ +Y P P +V IT LSL Sbjct: 360 VERSSSAFTKKPVDLHTVWANSIILSADVNHLYNPNFPEVYLKNHFPVPNVGIT-LSLDP 418 Query: 332 NGYKKLLKERKEMFSYLSNQIKKLSEAYNER--LLHTPHNP-----ISLAMTLKTLDEHR 384 NG+ + +++L+ ++ +N I ++ +T Sbjct: 419 NGHMA-------TDVVGTALVEELARRNGDKVQYFQIKNNSRSGGTIGPSLASQTGARTI 471 Query: 385 DKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSH 425 D + QL SM R +G++ V LG F GF H Sbjct: 472 DLGIAQL-SMHSIRAATGSKDVGLGVK------FFNGFFKH 505 >6H23-A nrPDB Length = 229 Score = 28.9 bits (63), Expect = 5.1, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 30/203 (14%) Query: 15 PAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIM--DSNNFLGNCGV 72 P V Q R+++ RLL E+ C D+S L + +L + +SN + + Sbjct: 4 PIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMAI 63 Query: 73 GEREGRVASALVARRHYRFIHG------IGRSGDISAVQPKAAGSSLLNKITNSLVLDII 126 G V + L ++I +G++ + ++ A + + + NS ++ Sbjct: 64 NSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQ 123 Query: 127 KLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEP 186 G A + M L K Y I+ + ++S Sbjct: 124 PSGGARGQATDIAIQAEEIMKLK-----------KQLYNIYAKHTKQS-----------L 161 Query: 187 VVIENVLEGDELRTDLKAVEAKV 209 VIE+ +E D + ++A E + Sbjct: 162 QVIESAMERDRYMSPMEAQEFGI 184 >6BDY-A nrPDB Length = 333 Score = 28.9 bits (63), Expect = 5.5, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 13/104 (12%) Query: 169 RIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFA 228 ID F + AG P ++E+ + G E + K + +L + L F Sbjct: 50 YIDWTPFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFP 109 Query: 229 P-RVPDRLEELAVICANYDIPHIVNNAYGVQ--------SSKCM 263 RV D +E I + H++N ++ ++ ++ C+ Sbjct: 110 ANRVGDDIE----IYRDETRTHVINVSHHLRQQTEKTGFANYCL 149 >3IV9-A nrPDB Length = 579 Score = 28.9 bits (63), Expect = 5.5, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 13/104 (12%) Query: 169 RIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFA 228 ID F + AG P ++E+ + G E + K + +L + L F Sbjct: 296 YIDWTPFFMTWSLAGKYPRILEDEVVGVEAQRLFKDANDMLDKLSAEKTLNPRGVVGLFP 355 Query: 229 P-RVPDRLEELAVICANYDIPHIVNNAYGVQ--------SSKCM 263 RV D +E I + H++N ++ ++ ++ C+ Sbjct: 356 ANRVGDDIE----IYRDETRTHVINVSHHLRQQTEKTGFANYCL 395 >6EM4-A nrPDB Length = 291 Score = 28.5 bits (62), Expect = 7.4, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 8/53 (15%) Query: 23 EARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGER 75 EAR+ H+ L L L K P NG T++ ++ L MD NF GNC G R Sbjct: 90 EARK-HQDLY-LWLSK---PPNG---PTIKFYIQNLHTMDELNFTGNCLKGSR 134 >1TG6-A nrPDB Length = 277 Score = 28.1 bits (61), Expect = 9.1, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 30/203 (14%) Query: 15 PAYVRQGCEARRSHEHLIRLLLEKGKCPENGWDESTLELFLHELAIM--DSNNFLGNCGV 72 P V Q R+++ RLL E+ C D+S L + +L + +SN + + Sbjct: 60 PIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIHMYI 119 Query: 73 GEREGRVASALVARRHYRFIHG------IGRSGDISAVQPKAAGSSLLNKITNSLVLDII 126 G V + L ++I +G++ + ++ A + + + NS ++ Sbjct: 120 NSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQ 179 Query: 127 KLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEP 186 G A + M L K Y I+ + ++S Sbjct: 180 PSGGARGQATDIAIQAEEIMKLK-----------KQLYNIYAKHTKQS-----------L 217 Query: 187 VVIENVLEGDELRTDLKAVEAKV 209 VIE+ +E D + ++A E + Sbjct: 218 QVIESAMERDRYMSPMEAQEFGI 240 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.133 0.360 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,012,224 Number of Sequences: 36641 Number of extensions: 694551 Number of successful extensions: 2035 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 30 Number of HSP's that attempted gapping in prelim test: 2000 Number of HSP's gapped (non-prelim): 48 length of query: 501 length of database: 10,336,785 effective HSP length: 101 effective length of query: 400 effective length of database: 6,636,044 effective search space: 2654417600 effective search space used: 2654417600 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 61 (28.1 bits)