BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9HBL8
         (299 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2EXX-A nrPDB                                                          617   e-177
5F5N-A nrPDB                                                           87   1e-17
2VUU-A nrPDB                                                           65   5e-11
4G5H-A nrPDB                                                           33   0.12 
4J2O-A nrPDB                                                           32   0.26 
3SLK-A nrPDB                                                           31   0.67 
3IGH-X nrPDB                                                           30   1.00 
2J3M-A nrPDB                                                           29   2.5  
3E9N-A nrPDB                                                           29   2.6  
4XAV-A nrPDB                                                           29   2.9  
5A9T-A nrPDB                                                           28   3.8  
2QYS-A nrPDB                                                           28   6.7  
2P4H-X nrPDB                                                           27   9.0  
4N4U-A nrPDB                                                           27   9.9  

>2EXX-A nrPDB
          Length = 306

 Score =  617 bits (1591), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQD 60
           MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQD
Sbjct: 8   MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQD 67

Query: 61  DQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL 120
           DQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL
Sbjct: 68  DQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL 127

Query: 121 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT 180
           TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT
Sbjct: 128 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT 187

Query: 181 GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAK 240
           GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAK
Sbjct: 188 GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAK 247

Query: 241 MTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNLL 299
           MTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNLL
Sbjct: 248 MTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNLL 306


>5F5N-A nrPDB
          Length = 289

 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 9/224 (4%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQV 63
            + ++V G TG QGG+  R LL  G   VR + R+P   AA+ L   G  +V GD +DQ 
Sbjct: 1   NRTILVTGATGTQGGATVRALLARGR-PVRALVRDPGTDAARALAAAGVSLVTGDLNDQA 59

Query: 64  IMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG 123
            +  A+   +  F V  +        E++QG+ +AD A   G+ +VVYS +    + +  
Sbjct: 60  SLRAAMADVHGVFSVQTFMTPGGLGAELRQGRAVADAAAATGVRHVVYSSVGGADRAS-- 117

Query: 124 RLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLP-TGD 182
                HF+ K  +E + R +GVP T +R P +F +  + + PQ A DG + ++ LP    
Sbjct: 118 --GVPHFETKWTIERHLRSLGVPTTVLR-PTFFMDNFAAWGPQ-AVDG-TLVVRLPLKPQ 172

Query: 183 VPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAA 226
             +  ++  D+G    +    P+ YVG  + L+    T  E AA
Sbjct: 173 TRVQLIAAEDIGVFAATAFDDPDTYVGAALELAGDELTGPELAA 216


>2VUU-A nrPDB
          Length = 352

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 15/221 (6%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ 62
           KK + V   TG Q  S+ R     G   VR    + +   A+EL+ +    + QG   + 
Sbjct: 5   KKTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 63

Query: 63  V-IMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL 120
           V +M+    GA+  FI T    +     E+  GK LAD A+R G + + +YS + +   L
Sbjct: 64  VPLMDTLFEGAHLAFINT----TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD-HSL 118

Query: 121 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLP----QKAPDGKSYLL 176
                A   +  K  VE Y R +G+P T V    Y  N  S   P    +  PDG     
Sbjct: 119 YGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWH 178

Query: 177 SLPTGDVPMDGMSVS-DLGPVVLSLLK-MPEKYVGQNIGLS 215
           +    D+P+  +    D+GP +L + K  P+K+ G  I L+
Sbjct: 179 APFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALT 219


>4G5H-A nrPDB
          Length = 363

 Score = 33.5 bits (75), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 12/40 (30%), Positives = 27/40 (67%)

Query: 3  DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 42
          D K++++ GGTG+ G +V +  L+    ++R+ +R+ +K+
Sbjct: 24 DDKILLITGGTGSFGNAVMKRFLDSNIKEIRIFSRDEKKQ 63


>4J2O-A nrPDB
          Length = 363

 Score = 32.3 bits (72), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 13/42 (30%), Positives = 27/42 (64%)

Query: 1  MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 42
          M   K++++ GGTG+ G +V +  LE    ++R+ +R+ +K+
Sbjct: 20 MFKDKVLLITGGTGSFGNAVLKRFLETDIKEIRIFSRDEKKQ 61


>3SLK-A nrPDB
          Length = 795

 Score = 30.8 bits (68), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 7   VVVFGGTGAQGGSVARTL-LEDGTFKVRVVT-RNPRKKAAKELRLQ----GAEV 54
           V+V GGTGA G  VAR L +E G   + +V+ R P    A EL  Q    GAEV
Sbjct: 533 VLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEV 586


>3IGH-X nrPDB
          Length = 486

 Score = 30.4 bits (67), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 24/128 (18%)

Query: 171 GKSYLLSLPTGDVPMDGMSVSDLGPVVLS---LLKMPEKYVGQNIGLSTCRHTAEEYAAL 227
            ++ LLS P  D P      S  G +V+    L+++ EK   +++GL    H   + A  
Sbjct: 271 ARTALLSKPYSDDP------STSGQLVMEREELIRITEK--ARSLGLDVAIHAIGDKAL- 321

Query: 228 LTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQ 287
                        +  + +E  GFPG  + A++ R   L   +++++ L + P  +  D 
Sbjct: 322 ------------DVALDVFETTGFPGRIEHASLVRDDQLERVKNLKVRLSVQPHFIISDW 369

Query: 288 WLEQHKGD 295
           W+ +  G+
Sbjct: 370 WIVERVGE 377


>2J3M-A nrPDB
          Length = 572

 Score = 28.9 bits (63), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 215 STCRHTAEEYAALL----TKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDR 270
           + C  T  +YAA L    + +T K  H+ ++   D EK+  P    +A +  F+ + P R
Sbjct: 220 TICYSTESDYAANLEMATSLYTPKKSHETQL---DLEKIATPEVGTIAEVANFFEVEPQR 276

Query: 271 DIELTL 276
            I+  L
Sbjct: 277 IIKSVL 282


>3E9N-A nrPDB
          Length = 245

 Score = 28.9 bits (63), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 4  KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQV 63
          KK+ VV G TG  G  + + L  D    V  + RNP   AA    ++G E ++ D   +V
Sbjct: 5  KKIAVVTGATGGMGIEIVKDLSRD--HIVYALGRNPEHLAALA-EIEGVEPIESDIVKEV 61

Query: 64 IME 66
          + E
Sbjct: 62 LEE 64


>4XAV-A nrPDB
          Length = 271

 Score = 28.9 bits (63), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 2   VDKKLVVVFGGTGAQGGSVARTLLEDGTFKV--RVVTRNPRKKAAKELRLQGAEVVQGDQ 59
           VD+K + +   +   G S+    L++ TF V   + T  P+ KA      +G   V   +
Sbjct: 148 VDEKGIWIIYASSVDGSSILVAQLDERTFSVTQHINTTYPKSKAGNAFIARGILYVTDTK 207

Query: 60  DDQVIMELALNG 71
           D +V     L G
Sbjct: 208 DTRVTFAFDLLG 219


>5A9T-A nrPDB
          Length = 290

 Score = 28.5 bits (62), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 1  MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA 43
          M D+ L V   G G  G ++A  LL+ G   V V  R+P K A
Sbjct: 1  MTDQNLPVTVAGLGPMGSALAAALLDRG-HDVTVWNRSPGKAA 42


>2QYS-A nrPDB
          Length = 318

 Score = 27.7 bits (60), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 4  KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQGAEVVQGDQDD 61
          K  +++FGGTG  G  + +  L+ G     V TR    K     E +  GA +V+G+ D+
Sbjct: 11 KSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDE 69

Query: 62 Q 62
           
Sbjct: 70 H 70


>2P4H-X nrPDB
          Length = 322

 Score = 27.3 bits (59), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 4  KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 42
          K  V V GGTG  G  + ++LLE+G      +  +P +K
Sbjct: 1  KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERK 39


>4N4U-A nrPDB
          Length = 326

 Score = 26.9 bits (58), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 74  ATFIVTNYWESCSQEQEVKQGKLLADLARRLG 105
           AT +V+ YWE  ++EQ  +  + LA++ + LG
Sbjct: 294 ATDLVSGYWEDWAREQGPEAVQALAEVRKALG 325


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2EXX-A nrPDB                                                          501   e-142
2VUU-A nrPDB                                                          274   3e-74
5F5N-A nrPDB                                                          256   1e-68

Sequences not found previously or not previously below threshold:

2ZCU-A nrPDB                                                           72   3e-13
1QYC-A nrPDB                                                           71   5e-13
2GAS-A nrPDB                                                           56   2e-08
2QYS-A nrPDB                                                           50   1e-06
2NNL-D nrPDB                                                           43   2e-04
2Q4B-A nrPDB                                                           42   3e-04
1QYD-A nrPDB                                                           41   6e-04
3HFS-A nrPDB                                                           41   6e-04
4R1U-A nrPDB                                                           40   0.001
4QUK-A nrPDB                                                           39   0.003
2GN9-A nrPDB                                                           36   0.024
1HE4-A nrPDB                                                           35   0.041
4N7R-A nrPDB                                                           35   0.054
3E9N-A nrPDB                                                           33   0.13 
2P4H-X nrPDB                                                           33   0.14 
5HZH-A nrPDB                                                           32   0.35 
1EZ0-A nrPDB                                                           31   0.63 
3M2P-A nrPDB                                                           31   0.67 
4J6F-A nrPDB                                                           30   0.90 
1PHP-A nrPDB                                                           30   1.1  
1MG2-A nrPDB                                                           30   1.2  
4RHH-A nrPDB                                                           30   1.3  
3RDE-A nrPDB                                                           30   1.6  
5XNM-B nrPDB                                                           30   1.6  
3IGH-X nrPDB                                                           30   1.7  
3AEK-B nrPDB                                                           29   2.1  
5ZZ8-h nrPDB                                                           29   2.2  
6ICZ-I nrPDB                                                           29   2.5  
5EJ2-A nrPDB                                                           29   3.3  
5EIO-A nrPDB                                                           29   4.0  
3SLK-A nrPDB                                                           29   4.0  
3FQD-A nrPDB                                                           28   4.7  
2ZIR-B nrPDB                                                           28   5.4  
2ZYZ-B nrPDB                                                           28   6.1  
4UU4-A nrPDB                                                           28   6.3  
2ZWS-A nrPDB                                                           28   6.4  

>2EXX-A nrPDB
          Length = 306

 Score =  501 bits (1291), Expect = e-142,   Method: Composition-based stats.
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 1   MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQD 60
           MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQD
Sbjct: 8   MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQD 67

Query: 61  DQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL 120
           DQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL
Sbjct: 68  DQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKL 127

Query: 121 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT 180
           TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT
Sbjct: 128 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT 187

Query: 181 GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAK 240
           GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAK
Sbjct: 188 GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAK 247

Query: 241 MTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNLL 299
           MTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNLL
Sbjct: 248 MTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNLL 306


>2VUU-A nrPDB
          Length = 352

 Score =  274 bits (701), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 15/242 (6%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ 62
           KK + V   TG Q  S+ R     G   VR    + +   A+EL+ +    + QG   + 
Sbjct: 5   KKTIAVVNATGRQAASLIRVAAAVG-HHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 63

Query: 63  V-IMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKL 120
           V +M+    GA+  FI T    +     E+  GK LAD A+R G + + +YS + +   L
Sbjct: 64  VPLMDTLFEGAHLAFINT----TSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD-HSL 118

Query: 121 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLP----QKAPDGKSYLL 176
                A   +  K  VE Y R +G+P T V    Y  N  S   P    +  PDG     
Sbjct: 119 YGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWH 178

Query: 177 SLPTGDVPMDGMSVS-DLGPVVLSLLKM-PEKYVGQNIGLSTCRHTAEEYAALLTKHTRK 234
           +    D+P+  +    D+GP +L + K  P+K+ G  I L+    +  +  A  ++   +
Sbjct: 179 APFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR 238

Query: 235 VV 236
            V
Sbjct: 239 RV 240


>5F5N-A nrPDB
          Length = 289

 Score =  256 bits (653), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 106/223 (47%), Gaps = 7/223 (3%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQV 63
            + ++V G TG QGG+  R LL  G   VR + R+P   AA+ L   G  +V GD +DQ 
Sbjct: 1   NRTILVTGATGTQGGATVRALLARGR-PVRALVRDPGTDAARALAAAGVSLVTGDLNDQA 59

Query: 64  IMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG 123
            +  A+   +  F V  +        E++QG+ +AD A   G+ +VVYS +    + +  
Sbjct: 60  SLRAAMADVHGVFSVQTFMTPGGLGAELRQGRAVADAAAATGVRHVVYSSVGGADRAS-- 117

Query: 124 RLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDV 183
                HF+ K  +E + R +GVP T +R P +F +  + + PQ A DG   +        
Sbjct: 118 --GVPHFETKWTIERHLRSLGVPTTVLR-PTFFMDNFAAWGPQ-AVDGTLVVRLPLKPQT 173

Query: 184 PMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAA 226
            +  ++  D+G    +    P+ YVG  + L+    T  E AA
Sbjct: 174 RVQLIAAEDIGVFAATAFDDPDTYVGAALELAGDELTGPELAA 216


>2ZCU-A nrPDB
          Length = 286

 Score = 72.1 bits (175), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 24/262 (9%)

Query: 6   LVVVFGGTGAQGGSVARTLLE-DGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVI 64
           ++ + G TG  G  V  +L++     ++  + RNP K  A+ L  QG  V Q D  D+  
Sbjct: 1   MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK--AQALAAQGITVRQADYGDEAA 58

Query: 65  MELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGR 124
           +  AL G     +++    S    Q   Q + + + A+  G+ ++ Y+ L +      G 
Sbjct: 59  LTSALQGVEKLLLIS----SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHADTSPLG- 113

Query: 125 LAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVP 184
           LA  H +     E+   D G+  T +R   Y EN L+   P     G     +   GD  
Sbjct: 114 LADEHIET----EKMLADSGIVYTLLRNGWYSENYLAS-APAALEHGVFIGAA---GDGK 165

Query: 185 MDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRH-TAEEYAALLTKHTRKVVHDAKMTP 243
           +   + +D       ++     + G+   L+     T  + AA LTK + K V    ++ 
Sbjct: 166 IASATRADYAAAAARVISEA-GHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSE 224

Query: 244 EDY----EKLGFPGARDLANMF 261
            D+    + +G P    LA+M 
Sbjct: 225 ADFAAALKSVGLPDG--LADML 244


>1QYC-A nrPDB
          Length = 308

 Score = 71.3 bits (173), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 96/261 (36%), Gaps = 21/261 (8%)

Query: 1   MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-------NPRKKAAKELRLQGAE 53
           M  +  +++ G TG  G  VA+  L+ G     ++ R       + + +  +  +  GA 
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGAN 59

Query: 54  VVQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSG 113
           +V G  DD   +   +       +V +   S   E +V   K + ++     +     S 
Sbjct: 60  IVHGSIDDHASL---VEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGT---VKRFFPSE 113

Query: 114 LE-NIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPC---YFENLLSHFLPQKAP 169
              ++  + A   A + F+ K +V       G+P T V   C   YF   L+       P
Sbjct: 114 FGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPP 173

Query: 170 DGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQ-NIGLSTCRHTAEEYAALL 228
             K  ++ L  G+  +  +   D+G   +  +  P        + L     +  E  AL 
Sbjct: 174 RDK--VVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALW 231

Query: 229 TKHTRKVVHDAKMTPEDYEKL 249
            K   K +  A +  E+  KL
Sbjct: 232 EKKIDKTLEKAYVPEEEVLKL 252


>2GAS-A nrPDB
          Length = 307

 Score = 55.9 bits (133), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 65/312 (20%), Positives = 110/312 (35%), Gaps = 38/312 (12%)

Query: 7   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTR------NPRKKAAKEL----RLQGAEVVQ 56
           +++ G TGA G  +    ++ G      + R      NP  K  +EL    +  G  +++
Sbjct: 5   ILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETK--EELIDNYQSLGVILLE 61

Query: 57  GDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE- 115
           GD +D    E  +       IV         E +VK  K + +      +     S    
Sbjct: 62  GDINDH---ETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG---NVKKFFPSEFGL 115

Query: 116 NIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSV---RLPCYFENLLSHFLPQKAPDGK 172
           ++ +  A       F+ K  +       GVP T +       YF   L+       P  K
Sbjct: 116 DVDRHDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDK 175

Query: 173 SYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQ-NIGLSTCRHTAEEYAALLTKH 231
             ++ L  G+V    ++ +D+G   +     P       +I L     T  E  AL  K 
Sbjct: 176 --VVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKK 233

Query: 232 TRKVVHDAKMTPE----DYEKLGFPGARDLANMFR-------FYALRPDRDIELTLRL-N 279
             K +    ++ E    D ++  FP    LA            Y + P +DIE +    +
Sbjct: 234 IGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAKDIEASEAYPD 293

Query: 280 PKALTLDQWLEQ 291
               T D++L Q
Sbjct: 294 VTYTTADEYLNQ 305


>2QYS-A nrPDB
          Length = 318

 Score = 50.1 bits (118), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 73/211 (34%), Gaps = 18/211 (8%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR--NPRKKAAKELRLQGAEVVQGDQDD 61
           K  +++FGGTG  G  + +  L+ G     V TR  + +     E +  GA +V+G+ D+
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDE 69

Query: 62  QVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE-NIKKL 120
              +   +           +       Q + Q K+L  +     +   + S       ++
Sbjct: 70  HEKLVELMKKVDVVISALAFP------QILDQFKILEAIKVAGNIKRFLPSDFGVEEDRI 123

Query: 121 TAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPC---YFENLLSHFLPQKAPDGKSYLLS 177
            A     A  + K  +     +  +P T V   C   YF N L         D K  +  
Sbjct: 124 NALPPFEALIERKRMIRRAIEEANIPYTYVSANCFASYFINYLLRPY-----DPKDEITV 178

Query: 178 LPTGDVPMDGMSVSDLGPVVLSLLKMPEKYV 208
             TG+         D+G   + +   P    
Sbjct: 179 YGTGEAKFAMNYEQDIGLYTIKVATDPRALN 209


>2NNL-D nrPDB
          Length = 337

 Score = 42.8 bits (99), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 15/127 (11%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR--KKAAKELRLQGA----EVVQG 57
            + V V G +G  G  +   LLE G + VR   R+P   KK    L L  A     + + 
Sbjct: 5   SETVCVTGASGFIGSWLVMRLLERG-YTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKA 63

Query: 58  DQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGK--------LLADLARRLGLHYV 109
           D  D+   + A+ G    F V    +  S++ E +  K        ++   A    +  +
Sbjct: 64  DLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRL 123

Query: 110 VYSGLEN 116
           V++    
Sbjct: 124 VFTSSAG 130


>2Q4B-A nrPDB
          Length = 253

 Score = 42.4 bits (98), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 62/177 (35%), Gaps = 36/177 (20%)

Query: 6   LVVVFGGTGAQGGSVARTLLE-DGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVI 64
            V+V G +G  G  V + L E    F  + + R+ +    KE     A+V  GD  D   
Sbjct: 6   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG---KEKIGGEADVFIGDITDADS 62

Query: 65  MELALNGAYATFIVTNYWESCSQEQEVKQG---------------------KLLADLARR 103
           +  A  G  A  I+T+         +  +G                     K   D A+ 
Sbjct: 63  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

Query: 104 LGLHY-VVYSGLEN------IKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLP 153
            G+ + VV   +        + KL  G +    +  K   E+Y  D G P T +R  
Sbjct: 123 AGVKHIVVVGSMGGTNPDHPLNKLGNGNILV--WKRK--AEQYLADSGTPYTIIRAG 175


>1QYD-A nrPDB
          Length = 313

 Score = 41.2 bits (95), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 18/220 (8%)

Query: 2   VDKKL-VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQ------GAEV 54
           +DKK  V++ GGTG  G  +    +  G     V+ R        ++++       GA++
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 59

Query: 55  VQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLG-LHYVVYS- 112
           ++   DD   +  AL       +V +          + +   L +  +  G +   + S 
Sbjct: 60  IEASLDDHQRLVDALKQVD---VVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSE 116

Query: 113 -GLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPC---YFENLLSHFLPQKA 168
            G++      A +  +  F  K +V        +P T V       YF   L+       
Sbjct: 117 FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMM 176

Query: 169 PDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYV 208
           P  +  +L    G+V    +   D+G   +  +  P+   
Sbjct: 177 PP-RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLN 215


>3HFS-A nrPDB
          Length = 338

 Score = 40.9 bits (94), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 2  VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP--RKKAAKELRLQ---GAEVVQ 56
          + KK   V GGTG     + + LL+ G + V    R+P  +KK +  L LQ     ++ +
Sbjct: 7  IGKKTACVVGGTGFVASLLVKLLLQKG-YAVNTTVRDPDNQKKVSHLLELQELGDLKIFR 65

Query: 57 GDQDDQVIMELALNGAYATFIVTNYWESCSQEQE 90
           D  D++  E  + G    F V       S++ E
Sbjct: 66 ADLTDELSFEAPIAGCDFVFHVATPVHFASEDPE 99


>4R1U-A nrPDB
          Length = 349

 Score = 40.1 bits (92), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 9/118 (7%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR---NPRKKAAKELRLQ--GAEVVQGD 58
            + V V G  G     + + LLE G + VR   R   +P+    KEL        + + D
Sbjct: 27  DQTVCVTGAGGFIASWLVKLLLERG-YTVRGTVRNPEDPKNGHLKELEGARERLTLHKVD 85

Query: 59  QDDQVIMELALNGAYATFIVTNYWESCS---QEQEVKQGKLLADLARRLGLHYVVYSG 113
             D   ++  ++G +  F   +          E  V   K +   +    +  VV++ 
Sbjct: 86  LLDLQSIQSVVHGCHGVFHTASPVTDNPDEMLEPAVNGTKNVIIASAEAKVRRVVFTS 143


>4QUK-A nrPDB
          Length = 319

 Score = 38.5 bits (88), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 6  LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR--KKAAKELRLQGA----EVVQGDQ 59
          +V V G +G     + R LL  G + V+   R+P   KK    ++L GA    ++ + + 
Sbjct: 2  VVCVTGASGYIASWLVRLLLHRG-YTVKATVRDPNDPKKVDHLVKLDGAKERLQLFKANL 60

Query: 60 DDQVIMELALNGAYATF 76
           ++   +  + G +  F
Sbjct: 61 LEEGAFDSVVQGCHGVF 77


>2GN9-A nrPDB
          Length = 344

 Score = 35.8 bits (81), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 1  MVDKKLVVVFGGTGAQGGSVARTLLE-DGTFKVRVVTRN--PRKKAAKELRLQGAEVVQG 57
          M+D + +++ GGTG+ G    R +L+     K+ V +R+   + + A E          G
Sbjct: 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG 77

Query: 58 DQDDQVIMELALNGA 72
          D  D   +  AL G 
Sbjct: 78 DVRDLERLNYALEGV 92


>1HE4-A nrPDB
          Length = 206

 Score = 35.1 bits (79), Expect = 0.041,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 18/210 (8%)

Query: 5   KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVI 64
           K + +FG TG  G +     ++ G ++V V+ R+  +  ++  R      V GD      
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPSEGPRPAHV--VVGDVLQAAD 60

Query: 65  MELALNGAYATFIVTNYWESCSQEQEVKQG-KLLADLARRLGLHYVV--YSGLENIKKLT 121
           ++  + G  A  ++       S    + +G + +    +  G+  VV   S         
Sbjct: 61  VDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK 120

Query: 122 AGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTG 181
                 A  D    + +  R+ G+   +V  P        H   Q      +  L    G
Sbjct: 121 VPPRLQAVTDDHIRMHKVLRESGLKYVAVMPP--------HIGDQPLTGAYTVTL---DG 169

Query: 182 DVPMDGMSVSDLGPVVLSLLKMPEKYVGQN 211
             P   +S  DLG  +L  L   ++Y G +
Sbjct: 170 RGPSRVISKHDLGHFMLRCLTT-DEYDGHS 198


>4N7R-A nrPDB
          Length = 472

 Score = 34.7 bits (78), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 12  GTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNG 71
           G G  G  V + L+  G  KV VV R+  + +A    + G E++    D+   M    + 
Sbjct: 214 GAGKMGKLVIKHLMAKGCTKVVVVNRSEERVSAIREEMPGIEIIYRPLDE---MLACASE 270

Query: 72  AYATFIVTNYWESCSQEQEVKQGKLLADLARRL-GLHYVVYSGLE 115
           A   F  T        ++ V   + L   +  + GL + V   + 
Sbjct: 271 ADVVFTSTASETPLFLKEHV---ENLPQASPEVGGLRHFVDISVP 312


>3E9N-A nrPDB
          Length = 245

 Score = 33.1 bits (74), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 2  VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDD 61
          + KK+ VV G TG  G  + + L  D    V  + RNP   AA    ++G E ++ D   
Sbjct: 3  LKKKIAVVTGATGGMGIEIVKDLSRD--HIVYALGRNPEHLAALA-EIEGVEPIESDIVK 59

Query: 62 QVIME 66
          +V+ E
Sbjct: 60 EVLEE 64


>2P4H-X nrPDB
          Length = 322

 Score = 33.1 bits (74), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 14/133 (10%)

Query: 4   KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP--RKKAAKELRLQGAE----VVQG 57
           K  V V GGTG  G  + ++LLE+G      +  +P  ++  +    L GA         
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNA 60

Query: 58  DQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLA--------RRLGLHYV 109
           D  +      A+ G    F   +  +    E E    K   D A            +   
Sbjct: 61  DLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRF 120

Query: 110 VYSGLENIKKLTA 122
           +Y+   +      
Sbjct: 121 IYTSSGSAVSFNG 133


>5HZH-A nrPDB
          Length = 332

 Score = 32.0 bits (71), Expect = 0.35,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 42/162 (25%)

Query: 45  KELRLQGAEVVQGDQDDQVIM----ELALNGAYATFIVTNYWESCSQ------------- 87
           +E+  + A  +QG + D+  +    +   N    T  + NY +S  +             
Sbjct: 93  EEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQ 152

Query: 88  --------EQEVKQGKLLADLARRLGLHYVVYSGLENIKKL-----TAGRLA-AAHFDGK 133
                     ++   + + D A R G+  ++    ENI +      + G+      +D  
Sbjct: 153 KGDVQYFIGVQLDGTEHVRDAAEREGVM-LIKKTAENIDEAAKELGSGGKPVNLGLWDTA 211

Query: 134 GEVEEY--FRDIGVPMTSVRLPCY-------FENLLSHFLPQ 166
           G +E+Y   R +  P T V L C+       FEN+ + + P+
Sbjct: 212 G-LEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPE 252


>1EZ0-A nrPDB
          Length = 510

 Score = 31.2 bits (69), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 8/76 (10%)

Query: 126 AAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPM 185
           A       GE+      + +    V    Y + +L    P +AP        LP  D+  
Sbjct: 81  ALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAP--------LPKPDIRR 132

Query: 186 DGMSVSDLGPVVLSLL 201
             +++  +     S  
Sbjct: 133 QQIALGPVAVFGASNF 148


>3M2P-A nrPDB
          Length = 311

 Score = 30.8 bits (68), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 7   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 66
           + V GGTG  G  V  ++  DG   + ++TR+   KA  +   + ++    D  +Q  + 
Sbjct: 5   IAVTGGTGFLGQYVVESIKNDGNTPI-ILTRSIGNKAINDYEYRVSDYTLEDLINQ--LN 61

Query: 67  LALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENI--KKLTAGR 124
                 +      +  +           + L D      +  +VY+   +    + +   
Sbjct: 62  DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPW 121


>4J6F-A nrPDB
          Length = 382

 Score = 30.5 bits (67), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 24/95 (25%)

Query: 5   KLVVVFGGTGAQGGSVARTLLEDGTFKV----------------RVVTRNPRKKAAKELR 48
           + V+V G +G  G ++ +     G   +                + V    +   A+ + 
Sbjct: 208 ETVLVTGASGGVGSAIIQLARARGAVPIAVAGPGKEAAMLDIGAQAVVTRGQGDLAEAVE 267

Query: 49  LQG--------AEVVQGDQDDQVIMELALNGAYAT 75
                      A++V G   + ++  L   G Y T
Sbjct: 268 AASGGRPIDVVADLVGGPLFNDLLKILRPEGRYTT 302


>1PHP-A nrPDB
          Length = 394

 Score = 30.5 bits (67), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 24/148 (16%)

Query: 15  AQGGSVARTLLEDGTFKVRVV-TRNPRKKAAKELRLQGAEVVQGDQDD------------ 61
                  R L+E G   +       P+ K  +ELRL       G+  +            
Sbjct: 38  RAALPTIRYLIEHGAKVILASHLGRPKGKVVEELRLDAVAKRLGELLERPVAKTNEAVGD 97

Query: 62  --QVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKK 119
             +  ++    G         ++    ++ + +  K  A+LA        V        +
Sbjct: 98  EVKAAVDRLNEGDVLLLENVRFY-PGEEKNDPELAKAFAELA-----DLYVNDAFGAAHR 151

Query: 120 LTAGRLAAAHFDGK---GEVEEYFRDIG 144
             A     AH+        +E+    +G
Sbjct: 152 AHASTEGIAHYLPAVAGFLMEKELEVLG 179


>1MG2-A nrPDB
          Length = 390

 Score = 30.1 bits (66), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 8/107 (7%)

Query: 145 VPMTSVRLP--CYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLK 202
           +P   + LP    F      ++    PDGK+ L    +    +  + +   G     +L 
Sbjct: 124 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE--GKAFKRMLD 181

Query: 203 MPEKY----VGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAKMTPED 245
           +P+ Y       +     CR  +    A  T+ T ++ H     PED
Sbjct: 182 VPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPED 228


>4RHH-A nrPDB
          Length = 705

 Score = 30.1 bits (66), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 31  KVRVVTRNPRKKAAKELRLQGAEVV----QGDQDDQVIMELALNGAYAT---FIVTNYWE 83
            V+    +P   + +EL+L     V      D  +      A  G   T     +    +
Sbjct: 119 PVKA-VPDPETASEEELKLALVPAVIVEMTIDNTNGTRTRRAFFGFEGTDPYTSMRRIDD 177

Query: 84  SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT 121
           +C Q + V QG++L   ++  G+   ++  +E+I   T
Sbjct: 178 TCPQLRGVGQGRILGIASKDEGVRSALHFSMEDILTAT 215


>3RDE-A nrPDB
          Length = 573

 Score = 29.7 bits (65), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 15/126 (11%)

Query: 24  LLEDGTF--KVRVVTRNPRKKAAK----ELRLQGAEVVQGDQDDQVIMELALNGAYATFI 77
           L+  G+     R V  +P+    K    EL  +      G+  D +I+ +A  G +   +
Sbjct: 14  LVPRGSHMGTARTVVDDPQGLFKKHREEELAERRKLYRWGNWKDGLILNIASTGIHDLPV 73

Query: 78  VTNYWESCSQEQEVKQGKLLADLARRLGLHYVV-YSGLENIKKLTAGRLAAAHFDGKGEV 136
              + E    + E    K LADLA +  L+ ++ ++ L++  ++         + G+ ++
Sbjct: 74  DERFLEDKRIDFEASLAKGLADLAVKDSLNVLMSWNSLDSFNRIF--------WSGQSKL 125

Query: 137 EEYFRD 142
            E  RD
Sbjct: 126 AERVRD 131


>5XNM-B nrPDB
          Length = 507

 Score = 29.7 bits (65), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 31/89 (34%), Gaps = 22/89 (24%)

Query: 113 GLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGK 172
            ++N   +  G L    F  K   E + R         R+P +FE       P    DG 
Sbjct: 329 SMDNGDGIAVGWLGHPIFRDKEGRELFVR---------RMPTFFETF-----PVVLVDGD 374

Query: 173 SYLLSLPTGDVPM----DGMSVSDLGPVV 197
             +     GDVP        SV  +G +V
Sbjct: 375 GIV----RGDVPFRRAESKYSVEQVGVIV 399


>3IGH-X nrPDB
          Length = 486

 Score = 29.7 bits (65), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 27/50 (54%)

Query: 246 YEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGD 295
           +E  GFPG  + A++ R   L   +++++ L + P  +  D W+ +  G+
Sbjct: 328 FETTGFPGRIEHASLVRDDQLERVKNLKVRLSVQPHFIISDWWIVERVGE 377


>3AEK-B nrPDB
          Length = 525

 Score = 29.3 bits (64), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 93  QGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYF-RDIGVPMTSVR 151
             + L   A   GL  ++      ++K      AA       ++E    + +G+P   + 
Sbjct: 317 MARPLRTAAAEYGLEALITDDYLEVEKAIEA--AAPELILGTQMERNIAKKLGLPCAVIS 374

Query: 152 LPCYFENLLSHFLPQKAPDGKSYL 175
            P + ++  + + PQ   +G + L
Sbjct: 375 APVHVQDFPARYAPQMGFEGANVL 398


>5ZZ8-h nrPDB
          Length = 112

 Score = 29.3 bits (64), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 4/81 (4%)

Query: 98  ADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFE 157
           AD  R LG+  +V +   N + +        H   +G V E+ R  G       L     
Sbjct: 14  ADNVRALGMRGLVLAT-NNAQFIMDNSYPHPH-GTQGAVREFLR--GQAAALTDLGVTHA 69

Query: 158 NLLSHFLPQKAPDGKSYLLSL 178
           N      P  A D  +  L  
Sbjct: 70  NNTFAPQPMFAGDAAAEWLRP 90


>6ICZ-I nrPDB
          Length = 855

 Score = 28.9 bits (63), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 132 GKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDG--KSYLLSLPTGDVPMDGMS 189
            +   +   R + +   S   P Y   L SH LP+ A  G  +   LS  + +  ++ + 
Sbjct: 129 TRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLK 188

Query: 190 VSD 192
            SD
Sbjct: 189 SSD 191


>5EJ2-A nrPDB
          Length = 308

 Score = 28.5 bits (62), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 145 VPMTSVRLPCYFENLLSHFLPQKAPDGK--SYLLSLPTGDVPMDGMSVSDLGPVVLSLLK 202
           +P          +     F P     G      +S     +P+  +  SD+   VL L  
Sbjct: 229 LPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQMMHTLPVPWVDASDISNAVLFLAS 288

Query: 203 MPEKYV 208
              +YV
Sbjct: 289 DESRYV 294


>5EIO-A nrPDB
          Length = 344

 Score = 28.5 bits (62), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 2  VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVT 36
          +DKK + + G +G  GG   R  L     +V+ VT
Sbjct: 1  MDKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVT 35


>3SLK-A nrPDB
          Length = 795

 Score = 28.5 bits (62), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/47 (46%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 6   LVVVFGGTGAQGGSVARTL-LEDG-TFKVRVVTRNPRKKAAKELRLQ 50
            V+V GGTGA G  VAR L +E G    V V  R P    A EL  Q
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQ 578


>3FQD-A nrPDB
          Length = 899

 Score = 28.1 bits (61), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 46/185 (24%), Gaps = 33/185 (17%)

Query: 22  RTLLEDGTFKVRVVTRNPRKKAAKELRLQ---GAEVVQGDQDDQVIMELALNGAYATFIV 78
           R     G  +      +  K AA  L+ Q      +     +D +    A     +    
Sbjct: 495 RAANRLGLSREAAAVSSVNKLAASALKAQLVSNETLQNVPLEDSIASSSAYEDTDSIESS 554

Query: 79  TNYWESCSQE-QEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKG--- 134
           T        +   V Q +   D            +   +  +L        +++ K    
Sbjct: 555 TPVVHPIDTKVSNVGQKRKAPDSTEE--------NENTDTVRLYEPGYRERYYEQKFHIS 606

Query: 135 ---------EVEEYFRDI---------GVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLL 176
                     V+ Y   +         G P  +   P ++    + F    + D K  L 
Sbjct: 607 PDEPEKIREAVKHYVHGLCWVLLYYYQGCPSWTWYYPYHYAPFAADFKDLASIDVKFELN 666

Query: 177 SLPTG 181
                
Sbjct: 667 QPFKP 671


>2ZIR-B nrPDB
          Length = 440

 Score = 27.8 bits (60), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 27/91 (29%), Gaps = 5/91 (5%)

Query: 128 AHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDG 187
            H             IG            E LL +    K PDG   +      DV    
Sbjct: 151 PHLAPTYAAVNALCIIG--TEEAYNVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAY 208

Query: 188 MSVSDLGPVVLSLLKMPEKYVGQNIGLSTCR 218
            + S      L+ +  P+ + G    ++ C+
Sbjct: 209 CAAS---VASLTNIITPDLFEGTAEWIARCQ 236


>2ZYZ-B nrPDB
          Length = 183

 Score = 27.8 bits (60), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 120 LTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLP 179
              GR    +FD   ++ +YFRD+G     V+    F  L S +      D    ++   
Sbjct: 80  AALGRERMRNFDEIYKIYKYFRDLGY---VVKSGLKFGALFSVYEKGPGIDHAPMVVVFL 136

Query: 180 TGDVPMDGMSVSDL 193
             D    G+S +D+
Sbjct: 137 EPD---KGISATDI 147


>4UU4-A nrPDB
          Length = 175

 Score = 27.8 bits (60), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 4  KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQ 59
            L ++FG T A G S+A  L  D    +RV        +A+    QG  V +GD 
Sbjct: 5  NTLPLIFGLTAALGSSMALALPSDREQPIRVQ-----ADSAELDDKQGVAVYRGDV 55


>2ZWS-A nrPDB
          Length = 646

 Score = 27.8 bits (60), Expect = 6.4,   Method: Composition-based stats.
 Identities = 6/31 (19%), Positives = 14/31 (45%)

Query: 91  VKQGKLLADLARRLGLHYVVYSGLENIKKLT 121
           V+  + +   +   G+ +VV++G  N     
Sbjct: 418 VRIRRAVQAASEAAGIRHVVFNGYANAYASY 448


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.315    0.131    0.346 

Lambda     K      H
   0.267   0.0401    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,604,828
Number of Sequences: 36641
Number of extensions: 472821
Number of successful extensions: 1506
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 1467
Number of HSP's gapped (non-prelim): 71
length of query: 299
length of database: 10,336,785
effective HSP length: 96
effective length of query: 203
effective length of database: 6,819,249
effective search space: 1384307547
effective search space used: 1384307547
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.4 bits)