BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9HAN9 (279 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1GZU-A nrPDB 577 e-165 1NUQ-A nrPDB 260 4e-70 5Z9R-A nrPDB 253 6e-68 4YMI-A nrPDB 46 1e-05 1YUM-A nrPDB 45 3e-05 1KAM-A nrPDB 39 0.003 2H29-A nrPDB 37 0.010 3DV2-A nrPDB 36 0.017 4WSO-A nrPDB 35 0.030 3L93-A nrPDB 33 0.11 4YBR-A nrPDB 32 0.43 3NV7-A nrPDB 31 0.45 1K4M-A nrPDB 31 0.59 3X1M-A nrPDB 30 1.5 6MC8-A nrPDB 30 1.5 2BMB-A nrPDB 29 1.8 2FIW-A nrPDB 28 4.2 >1GZU-A nrPDB Length = 290 Score = 577 bits (1488), Expect = e-165, Method: Compositional matrix adjust. Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 2 ENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLI 61 ENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLI Sbjct: 13 ENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLI 72 Query: 62 PAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLE 121 PAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLE Sbjct: 73 PAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLE 132 Query: 122 RPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANY 181 RPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANY Sbjct: 133 RPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANY 192 Query: 182 GLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVP 241 GLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVP Sbjct: 193 GLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVP 252 Query: 242 DLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT 279 DLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT Sbjct: 253 DLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT 290 >1NUQ-A nrPDB Length = 252 Score = 260 bits (665), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 127/253 (50%), Positives = 167/253 (66%), Gaps = 19/253 (7%) Query: 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 65 + VVLLACGSFNPITNMHLR+FE+A+D+++ TG Y V++GIISPV D Y KK L ++H Sbjct: 4 RIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHH 63 Query: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125 RV MA LA + S W+ VD WES Q +W ET+KVLRHH KL S P +E P Sbjct: 64 RVAMARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHSKLLRS-------PPQMEGP-- 114 Query: 126 KRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC 185 K+L AVP++KLLCGAD+L++F PNLWK I +IV +GL+C Sbjct: 115 ----------DHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGLVC 164 Query: 186 VTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQ 245 V R +D + +I ES +L H+ NIH+ E + N+IS+T IRRAL +GQS++YL+PD V Sbjct: 165 VGRVSHDPKGYIAESPILRMHQHNIHLAKEPVQNEISATYIRRALGQGQSVKYLIPDAVI 224 Query: 246 EYIEKHNLYSSES 258 YI+ H LY+ S Sbjct: 225 TYIKDHGLYTKGS 237 >5Z9R-A nrPDB Length = 281 Score = 253 bits (646), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 122/259 (47%), Positives = 175/259 (67%), Gaps = 20/259 (7%) Query: 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 65 + VVLLACGSFNPITNMHLRLFE+A+D+++ TGRY V++GIISPV D+Y KK L+ ++H Sbjct: 40 RIPVVLLACGSFNPITNMHLRLFEVARDHLHQTGRYQVIEGIISPVNDSYGKKDLVASHH 99 Query: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125 RV MA LA + S W+ VD WES Q +W ET+KVLRHH +L S Q + P Sbjct: 100 RVAMARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHRELLRSSA--QMDGP------- 150 Query: 126 KRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC 185 D S+ S + A+P++KLLCGAD+L++F PNLWK I +IV +GL+C Sbjct: 151 --------DPSKTPS---ASAALPELKLLCGADVLKTFQTPNLWKDTHIQEIVEKFGLVC 199 Query: 186 VTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQ 245 V+R+G+D +++I +S +L + + NIH+ E + N+IS+T +R+AL +GQS++YL+P+ V Sbjct: 200 VSRSGHDPERYISDSPILQQFQHNIHLAREPVLNEISATYVRKALGQGQSVKYLLPEAVI 259 Query: 246 EYIEKHNLYSSESEDRNAG 264 YI LY ++ + G Sbjct: 260 TYIRDQGLYINDGSWKGKG 278 >4YMI-A nrPDB Length = 233 Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 65/269 (24%) Query: 1 MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKG- 59 M SE+ + ++ G+F+PI N HL D R+ + + I P G ++K+G Sbjct: 22 MVQSERRRLGVMG-GTFDPIHNGHLVAASEVAD------RFALDEVIFVPTGQPWQKQGR 74 Query: 60 -LIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSP 118 + PA HR +M +AT ++ + S D Sbjct: 75 KVSPAEHRYLMTVIATASNP--------------------------RFTVSRAD------ 102 Query: 119 TLERPGRKRKWTETQDS-SQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQI 177 ++R G T T D+ + ++ P + + GAD L S W+ Q+ Sbjct: 103 -IDRGGA----TYTVDTLTDLRTAHPDAD----LYFITGADALASILSWENWE-----QL 148 Query: 178 VANYGLICVTRAGND-AQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQS- 235 I V+R G + + I +++ S + V A ISST R +R GQ+ Sbjct: 149 FTLAKFIGVSRPGYELSSDHIAHAELPPDGLSLVEVP----ALAISSTDCR--IRAGQAR 202 Query: 236 -IRYLVPDLVQEYIEKHNLYSSESEDRNA 263 I YLVPD V +Y+ KH LYS ++ Sbjct: 203 PIWYLVPDGVVQYVAKHRLYSGNKGNQGG 231 >1YUM-A nrPDB Length = 242 Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 19/36 (52%), Positives = 27/36 (75%) Query: 221 ISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSS 256 +S+T+IR L G+S+R+LVPD V YIE H+LY + Sbjct: 197 VSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLYRA 232 >1KAM-A nrPDB Length = 194 Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 17/107 (15%) Query: 150 KVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSN 209 ++ + GAD++E +P +K +++ ++ I V R G + +L+ Sbjct: 105 QLFFIIGADMIE--YLPKWYKLDELLNLIQ---FIGVKRPGFHVET---PYPLLFAD--- 153 Query: 210 IHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSS 256 V E+ ++SST IR + + YL+PD V++Y+E++ LY S Sbjct: 154 ---VPEF---EVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLYES 194 >2H29-A nrPDB Length = 189 Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 24/35 (68%) Query: 220 DISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLY 254 DISST IR+ + G+SI+ LVP V+ YI+ LY Sbjct: 153 DISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLY 187 >3DV2-A nrPDB Length = 201 Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 21/115 (18%) Query: 145 TKAVPKVKL--LCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDV 202 TK P V+ + G D++E +P + E + +V G V R G Sbjct: 93 TKKYPDVQFHFIIGGDMVEY--LPKWYNIEALLDLVTFVG---VARPG------------ 135 Query: 203 LWKHRSNIHVVNEWIAN-DISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSS 256 +K R+ + I +SS+ +R + ++ +YL+P+ VQ YIE++ LY S Sbjct: 136 -YKLRTPYPITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYES 189 >4WSO-A nrPDB Length = 271 Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust. Identities = 56/260 (21%), Positives = 93/260 (35%), Gaps = 67/260 (25%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 G+F+PI + HL L D + + + ++ P G Y+K+ + A HR+ M A Sbjct: 57 GTFDPIHDGHLALARRFADVLR------LTELVLMPAGQPYQKQDVSAAEHRLAMTRAAA 110 Query: 75 KNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQD 134 + VL + + +H + T+E +W E Sbjct: 111 GS--------------------LVLPGVAVSVATDEIEHAGPTYTVE---TLERWRE--- 144 Query: 135 SSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC-VTRAGNDA 193 + A + LL GAD L W+ + ++ +C TR G D Sbjct: 145 ---------RLGADASLSLLIGADQLVRLDTWRDWRR------LFDFAHVCAATRPGFDF 189 Query: 194 QKFIY-----------ESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPD 242 +DVL + +++ +A D+++T IR LR + VPD Sbjct: 190 AAASPAVAAEIASRQASADVLRATPAGRLLIDTTLALDVAATDIRAHLRACIARHAQVPD 249 Query: 243 LVQE--------YIEKHNLY 254 E YI +H LY Sbjct: 250 ASAEHVSPAVWAYILQHRLY 269 >3L93-A nrPDB Length = 162 Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 9/78 (11%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 G+F+PITN HL L A + +I + D+ KK + RV +A+ T Sbjct: 12 GTFDPITNGHLDLVTRAS---------AMFSHVILAIADSSSKKPMFTLDERVALAKKVT 62 Query: 75 KNSKWVEVDTWESLQKEW 92 K VEV + L E+ Sbjct: 63 APLKNVEVLGFSELMAEF 80 >4YBR-A nrPDB Length = 201 Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust. Identities = 51/243 (20%), Positives = 96/243 (39%), Gaps = 55/243 (22%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK-KGLIPAYHRVIMAELA 73 G+F+PI HL D + + + + P G ++K + + A HR +M +A Sbjct: 12 GTFDPIHYGHLVAASEVADLFD------LDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIA 65 Query: 74 TKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQ 133 T ++ + S D + PT T+ Sbjct: 66 TASNP--------------------------RFSVSRVDIDRGGPTY-----------TK 88 Query: 134 DS-SQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGND 192 D+ + +L P ++ + GAD L S W E++ ++ + V+R G + Sbjct: 89 DTLADLHALHPDSE----LYFTTGADALASIMSWQGW--EELFELAR---FVGVSRPGYE 139 Query: 193 AQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIEKHN 252 + + + +L + + + E A ISST R+ + + + YL+PD V +Y+ K Sbjct: 140 LRN-EHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKRR 198 Query: 253 LYS 255 LY+ Sbjct: 199 LYT 201 >3NV7-A nrPDB Length = 157 Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 9/74 (12%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 G+F+P+TN H+ + + + + + +I V + K + R+ M +LAT Sbjct: 9 GTFDPVTNGHIDIIHRSSE---------LFEKLIVAVAHSSAKNPMFSLDERLKMIQLAT 59 Query: 75 KNSKWVEVDTWESL 88 K+ K VE +E L Sbjct: 60 KSFKNVECVAFEGL 73 >1K4M-A nrPDB Length = 213 Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 220 DISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLY 254 +IS+T IR L+ G+S L+P+ V YI + LY Sbjct: 178 NISATIIRERLQNGESCEDLLPEPVLTYINQQGLY 212 >3X1M-A nrPDB Length = 159 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 9/82 (10%) Query: 11 LLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMA 70 +L G+F+PIT H L E A + +I V + KK L RV +A Sbjct: 4 VLYPGTFDPITKGHGDLIERASRLFDH---------VIIAVAASPKKNPLFSLEQRVALA 54 Query: 71 ELATKNSKWVEVDTWESLQKEW 92 + TK+ VEV + +L + Sbjct: 55 QEVTKHLPNVEVVGFSTLLAHF 76 >6MC8-A nrPDB Length = 308 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 10/99 (10%) Query: 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGII----SPVGDAYKKKGLIP 62 T LA ++ IT++ R F+ ++ M + + ++ ++ S GDA + +P Sbjct: 199 TPATALAKAAWKVITSIKDRTFQ--RELMERSNQVGMLGALLGARHSGAGDALNQ---LP 253 Query: 63 AYHRVIMAELATKNSK-WVEVDTWESLQKEWKETLKVLR 100 H + + + + + EVD W+++Q+E ETL L+ Sbjct: 254 EAHFAVSSAVVRETGREGREVDRWKAMQREATETLDELQ 292 >2BMB-A nrPDB Length = 545 Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 10/104 (9%) Query: 78 KW-VEVDTWESLQKEWKETLKVLRH------HQEKLEASDCD---HQQNSPTLERPGRKR 127 +W + +D K WK+ L+++RH + + +++ + +N P L P RK+ Sbjct: 430 RWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQVYVNLRNMPVLLGPSRKK 489 Query: 128 KWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKS 171 K + T AV + G+D++ V N KS Sbjct: 490 FIGHITKDVDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKS 533 >2FIW-A nrPDB Length = 172 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 14/57 (24%), Positives = 26/57 (45%) Query: 179 ANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQS 235 A LI A ++A +F + + K R+ + + EW+AN + + + G S Sbjct: 113 ARGALILTVDASDNAAEFFAKRGYVAKQRNTVSINGEWLANTTMTKSLADSAAPGAS 169 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1GZU-A nrPDB 430 e-121 1NUQ-A nrPDB 371 e-103 5Z9R-A nrPDB 370 e-103 4YMI-A nrPDB 233 5e-62 1YUM-A nrPDB 87 7e-18 Sequences not found previously or not previously below threshold: 4YBR-A nrPDB 158 3e-39 4WSO-A nrPDB 85 3e-17 1KAM-A nrPDB 78 5e-15 1K4M-A nrPDB 65 3e-11 3DV2-A nrPDB 62 2e-10 2H29-A nrPDB 61 5e-10 3X1M-A nrPDB 39 0.003 3L93-A nrPDB 38 0.006 3NV7-A nrPDB 37 0.009 5O0B-A nrPDB 37 0.009 3ND6-A nrPDB 36 0.017 5JBN-A nrPDB 33 0.14 6G7T-A nrPDB 33 0.16 3NBK-A nrPDB 33 0.16 1N1D-A nrPDB 33 0.20 1OD6-A nrPDB 31 0.45 5LD2-D nrPDB 31 0.50 4GOX-A nrPDB 31 0.52 4MAF-A nrPDB 31 0.65 4NAH-A nrPDB 31 0.69 1D0M-A nrPDB 30 1.1 1O6B-A nrPDB 29 1.5 6JOG-A nrPDB 29 1.6 3PXU-A nrPDB 28 4.3 5Y0R-A nrPDB 28 5.9 >1GZU-A nrPDB Length = 290 Score = 430 bits (1105), Expect = e-121, Method: Composition-based stats. Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 2 ENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLI 61 ENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLI Sbjct: 13 ENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLI 72 Query: 62 PAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLE 121 PAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLE Sbjct: 73 PAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLE 132 Query: 122 RPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANY 181 RPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANY Sbjct: 133 RPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANY 192 Query: 182 GLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVP 241 GLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVP Sbjct: 193 GLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVP 252 Query: 242 DLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT 279 DLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT Sbjct: 253 DLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT 290 >1NUQ-A nrPDB Length = 252 Score = 371 bits (951), Expect = e-103, Method: Composition-based stats. Identities = 127/258 (49%), Positives = 168/258 (65%), Gaps = 19/258 (7%) Query: 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 65 + VVLLACGSFNPITNMHLR+FE+A+D+++ TG Y V++GIISPV D Y KK L ++H Sbjct: 4 RIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHH 63 Query: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125 RV MA LA + S W+ VD WES Q +W ET+KVLRHH KL S P +E P Sbjct: 64 RVAMARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHSKLLRS-------PPQMEGP-- 114 Query: 126 KRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC 185 K+L AVP++KLLCGAD+L++F PNLWK I +IV +GL+C Sbjct: 115 ----------DHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGLVC 164 Query: 186 VTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQ 245 V R +D + +I ES +L H+ NIH+ E + N+IS+T IRRAL +GQS++YL+PD V Sbjct: 165 VGRVSHDPKGYIAESPILRMHQHNIHLAKEPVQNEISATYIRRALGQGQSVKYLIPDAVI 224 Query: 246 EYIEKHNLYSSESEDRNA 263 YI+ H LY+ S + Sbjct: 225 TYIKDHGLYTKGSTWKGK 242 >5Z9R-A nrPDB Length = 281 Score = 370 bits (949), Expect = e-103, Method: Composition-based stats. Identities = 122/259 (47%), Positives = 175/259 (67%), Gaps = 20/259 (7%) Query: 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 65 + VVLLACGSFNPITNMHLRLFE+A+D+++ TGRY V++GIISPV D+Y KK L+ ++H Sbjct: 40 RIPVVLLACGSFNPITNMHLRLFEVARDHLHQTGRYQVIEGIISPVNDSYGKKDLVASHH 99 Query: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125 RV MA LA + S W+ VD WES Q +W ET+KVLRHH +L S Q + P Sbjct: 100 RVAMARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHRELLRSSA--QMDGP------- 150 Query: 126 KRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC 185 D S+ S + A+P++KLLCGAD+L++F PNLWK I +IV +GL+C Sbjct: 151 --------DPSKTPSA---SAALPELKLLCGADVLKTFQTPNLWKDTHIQEIVEKFGLVC 199 Query: 186 VTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQ 245 V+R+G+D +++I +S +L + + NIH+ E + N+IS+T +R+AL +GQS++YL+P+ V Sbjct: 200 VSRSGHDPERYISDSPILQQFQHNIHLAREPVLNEISATYVRKALGQGQSVKYLLPEAVI 259 Query: 246 EYIEKHNLYSSESEDRNAG 264 YI LY ++ + G Sbjct: 260 TYIRDQGLYINDGSWKGKG 278 >4YMI-A nrPDB Length = 233 Score = 233 bits (594), Expect = 5e-62, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 106/267 (39%), Gaps = 61/267 (22%) Query: 1 MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKG- 59 M SE+ + ++ G+F+PI N HL D R+ + + I P G ++K+G Sbjct: 22 MVQSERRRLGVMG-GTFDPIHNGHLVAASEVAD------RFALDEVIFVPTGQPWQKQGR 74 Query: 60 -LIPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSP 118 + PA HR +M +AT ++ + S D Sbjct: 75 KVSPAEHRYLMTVIATASNP--------------------------RFTVSRAD------ 102 Query: 119 TLERPGRKRKWTETQDS-SQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQI 177 ++R G T T D+ + ++ P + + GAD L S W+ Q+ Sbjct: 103 -IDRGGA----TYTVDTLTDLRTAHPDAD----LYFITGADALASILSWENWE-----QL 148 Query: 178 VANYGLICVTRAGND-AQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSI 236 I V+R G + + I +++ S + V A ISST R + + I Sbjct: 149 FTLAKFIGVSRPGYELSSDHIAHAELPPDGLSLVEVP----ALAISSTDCRIRAGQARPI 204 Query: 237 RYLVPDLVQEYIEKHNLYSSESEDRNA 263 YLVPD V +Y+ KH LYS ++ Sbjct: 205 WYLVPDGVVQYVAKHRLYSGNKGNQGG 231 >4YBR-A nrPDB Length = 201 Score = 158 bits (399), Expect = 3e-39, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 96/254 (37%), Gaps = 62/254 (24%) Query: 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK-KGLIPAYH 65 + ++ G+F+PI HL D + + + + P G ++K + + A H Sbjct: 5 RRLGVMG-GTFDPIHYGHLVAASEVAD------LFDLDEVVFVPSGQPWQKGRQVSAAEH 57 Query: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125 R +M +AT ++ + S D ++R G Sbjct: 58 RYLMTVIATASNP--------------------------RFSVSRVD-------IDRGG- 83 Query: 126 KRKWTETQDS-SQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLI 184 T T+D+ + +L P + ++ GAD L S W+ ++ + Sbjct: 84 ---PTYTKDTLADLHALHPDS----ELYFTTGADALASIMSWQGWE-----ELFELARFV 131 Query: 185 CVTRAGND-AQKFIYE--SDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVP 241 V+R G + + I + + + + A ISST R+ + + + YL+P Sbjct: 132 GVSRPGYELRNEHITSLLGQLAKDALTLVEIP----ALAISSTDCRQRAEQSRPLWYLMP 187 Query: 242 DLVQEYIEKHNLYS 255 D V +Y+ K LY+ Sbjct: 188 DGVVQYVSKRRLYT 201 >1YUM-A nrPDB Length = 242 Score = 87.3 bits (214), Expect = 7e-18, Method: Composition-based stats. Identities = 48/262 (18%), Positives = 98/262 (37%), Gaps = 64/262 (24%) Query: 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA-YKKKGLIPAYH 65 + L G+F+P+ H+R + ++ + + + P +++ + A Sbjct: 23 KRIGLFG-GTFDPVHIGHMRSAVEMAE------QFALDELRLLPNARPPHRETPQVSAAQ 75 Query: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125 R+ M E A + + VD E Sbjct: 76 RLAMVERAVAGVERLTVDPRELQ------------------------------------- 98 Query: 126 KRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC 185 + K + T D+ +S+ + A ++ +L G D + W++ ++ + ++ Sbjct: 99 RDKPSYTIDT--LESVRAELAADDQLFMLIGWDAFCGLPTWHRWEA-----LLDHCHIVV 151 Query: 186 VTRAGNDAQ-----------KFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQ 234 + R D++ + + + L I V + +S+T+IR L G+ Sbjct: 152 LQRPDADSEPPESLRDLLAARSVADPQALKGPGGQITFVWQ-TPLAVSATQIRALLGAGR 210 Query: 235 SIRYLVPDLVQEYIEKHNLYSS 256 S+R+LVPD V YIE H+LY + Sbjct: 211 SVRFLVPDAVLNYIEAHHLYRA 232 >4WSO-A nrPDB Length = 271 Score = 85.3 bits (209), Expect = 3e-17, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 92/271 (33%), Gaps = 74/271 (27%) Query: 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHR 66 + +L G+F+PI + HL L D + T + ++ P G Y+K+ + A HR Sbjct: 50 RRIGILG-GTFDPIHDGHLALARRFADVLRLT------ELVLMPAGQPYQKQDVSAAEHR 102 Query: 67 VIMAELATKN----SKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLER 122 + M A + V V T E T++ L +E+L Sbjct: 103 LAMTRAAAGSLVLPGVAVSVATDEIEHAGPTYTVETLERWRERL---------------- 146 Query: 123 PGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYG 182 A + LL GAD L W+ ++ Sbjct: 147 -----------------------GADASLSLLIGADQLVRLDTWRDWR-----RLFDFAH 178 Query: 183 LICVTRAGNDAQKFI-----------YESDVLWKHRSNIHVVNEWIANDISSTKIRRALR 231 + TR G D +DVL + +++ +A D+++T IR LR Sbjct: 179 VCAATRPGFDFAAASPAVAAEIASRQASADVLRATPAGRLLIDTTLALDVAATDIRAHLR 238 Query: 232 RGQSIRYLVPD--------LVQEYIEKHNLY 254 + VPD V YI +H LY Sbjct: 239 ACIARHAQVPDASAEHVSPAVWAYILQHRLY 269 >1KAM-A nrPDB Length = 194 Score = 77.6 bits (189), Expect = 5e-15, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 91/253 (35%), Gaps = 68/253 (26%) Query: 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKK--GLIPAY 64 ++ + G+F+P N HL + + G + + P K+ ++ Sbjct: 7 KKIGIFG-GTFDPPHNGHLLMANEV---LYQAG---LDEIWFMPNQIPPHKQNEDYTDSF 59 Query: 65 HRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPG 124 HRV M +LA +++ +++ E +ER G Sbjct: 60 HRVEMLKLAIQSNPSFKLELVE---------------------------------MEREG 86 Query: 125 RKRKWTETQDS-SQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGL 183 + T D+ S K P ++ + GAD++E + +++ Sbjct: 87 ----PSYTFDTVSLLKQRYPN----DQLFFIIGADMIEYLPKW-----YKLDELLNLIQF 133 Query: 184 ICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDL 243 I V R G F E+ ++SST IR + + YL+PD Sbjct: 134 IGVKRPG-----FHVETPYPLLFADVPEF-------EVSSTMIRERFKSKKPTDYLIPDK 181 Query: 244 VQEYIEKHNLYSS 256 V++Y+E++ LY S Sbjct: 182 VKKYVEENGLYES 194 >1K4M-A nrPDB Length = 213 Score = 64.9 bits (156), Expect = 3e-11, Method: Composition-based stats. Identities = 47/255 (18%), Positives = 86/255 (33%), Gaps = 65/255 (25%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVG-DAYKKKGLIPAYHRVIMAELA 73 G+F+P+ HL+ E + + T + I P ++ + + R M ELA Sbjct: 10 GTFDPVHYGHLKPVETLANLIGLT------RVTIIPNNVPPHRPQPEANSVQRKHMLELA 63 Query: 74 TKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQ 133 + +D E + T + L+ + Q+ P + Sbjct: 64 IADKPLFTLDERELKRNAPSYTAQTLKEWR----------QEQGPDV------------- 100 Query: 134 DSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRAGNDA 193 + + G D L +F +++ I+ N LI R G Sbjct: 101 ----------------PLAFIIGQDSLLTFPTWYEYET-----ILDNAHLIVCRRPGYPL 139 Query: 194 Q-----------KFIYESD--VLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLV 240 + + + + + I++ N IS+T IR L+ G+S L+ Sbjct: 140 EMAQPQYQQWLEDHLTHNPEDLHLQPAGKIYLAETPWFN-ISATIIRERLQNGESCEDLL 198 Query: 241 PDLVQEYIEKHNLYS 255 P+ V YI + LY Sbjct: 199 PEPVLTYINQQGLYR 213 >3DV2-A nrPDB Length = 201 Score = 62.2 bits (149), Expect = 2e-10, Method: Composition-based stats. Identities = 42/253 (16%), Positives = 84/253 (33%), Gaps = 68/253 (26%) Query: 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKG--LIPAY 64 ++ ++ G+F+P HL + +N + + P K+G + Sbjct: 2 RKIGIIG-GTFDPPHYGHLLIANEVYHALN------LEEVWFLPNQIPPHKQGRNITSVE 54 Query: 65 HRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPG 124 R+ M ELAT+ +E + + P Sbjct: 55 SRLQMLELATEA--------------------------EEHFSICLEELSRKGP------ 82 Query: 125 RKRKWTETQDSS-QKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGL 183 + T D+ Q P + + G D++E I ++ Sbjct: 83 -----SYTYDTMLQLTKKYPDV----QFHFIIGGDMVEYLPKWYN-----IEALLDLVTF 128 Query: 184 ICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDL 243 + V R G + + + + + +SS+ +R + ++ +YL+P+ Sbjct: 129 VGVARPGYKLR-----TPYP---ITTVEIPE----FAVSSSLLRERYKEKKTCKYLLPEK 176 Query: 244 VQEYIEKHNLYSS 256 VQ YIE++ LY S Sbjct: 177 VQVYIERNGLYES 189 >2H29-A nrPDB Length = 189 Score = 61.1 bits (146), Expect = 5e-10, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 81/245 (33%), Gaps = 61/245 (24%) Query: 10 VLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIM 69 ++L G FNPI H+ + + + + +SP+ K I HR+ M Sbjct: 4 IVLYGGQFNPIHTAHMIVASEVF-HELQPDEFYFLPSFMSPLK---KHHDFIDVQHRLTM 59 Query: 70 AELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKW 129 ++ D + ++ Sbjct: 60 IQMII-------------------------------------DELGFGDICDDEIKRGGQ 82 Query: 130 TETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLICVTRA 189 + T D+ + + ++ + G D ++ E + ++V + V R Sbjct: 83 SYTYDTIK---AFKEQHKDSELYFVIGTDQYNQLEKW--YQIEYLKEMVT---FVVVNRD 134 Query: 190 GNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYIE 249 N ++ N + + DISST IR+ + G+SI+ LVP V+ YI+ Sbjct: 135 KNS------------QNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIK 182 Query: 250 KHNLY 254 LY Sbjct: 183 GEGLY 187 >3X1M-A nrPDB Length = 159 Score = 38.7 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 9/135 (6%) Query: 11 LLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMA 70 +L G+F+PIT H L E A + +I V + KK L RV +A Sbjct: 4 VLYPGTFDPITKGHGDLIERAS---------RLFDHVIIAVAASPKKNPLFSLEQRVALA 54 Query: 71 ELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWT 130 + TK+ VEV + +L + + K + SD +++ + R + Sbjct: 55 QEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVES 114 Query: 131 ETQDSSQKKSLEPKT 145 S+K S T Sbjct: 115 MFLTPSEKYSFISST 129 >3L93-A nrPDB Length = 162 Score = 37.6 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 9/131 (6%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 G+F+PITN HL L A + +I + D+ KK + RV +A+ T Sbjct: 12 GTFDPITNGHLDLVTRAS---------AMFSHVILAIADSSSKKPMFTLDERVALAKKVT 62 Query: 75 KNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQD 134 K VEV + L E+ + + SD +++ + R + + Sbjct: 63 APLKNVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLI 122 Query: 135 SSQKKSLEPKT 145 S+K S + Sbjct: 123 PSEKWSFISSS 133 >3NV7-A nrPDB Length = 157 Score = 37.2 bits (84), Expect = 0.009, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 G+F+P+TN H+ D ++ + + + +I V + K + R+ M +LAT Sbjct: 9 GTFDPVTNGHI-------DIIHRSS--ELFEKLIVAVAHSSAKNPMFSLDERLKMIQLAT 59 Query: 75 KNSKWVEVDTWESLQK 90 K+ K VE +E L Sbjct: 60 KSFKNVECVAFEGLLA 75 >5O0B-A nrPDB Length = 162 Score = 36.8 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 9/79 (11%) Query: 10 VLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIM 69 + GSF+P+T HL +FE A + I++ + + K G+ R+ M Sbjct: 4 GAVCPGSFDPVTLGHLDVFERAAA--------QFDEVIVAVLINP-NKAGMFTVDERIEM 54 Query: 70 AELATKNSKWVEVDTWESL 88 +T + + V++ + L Sbjct: 55 IRESTADLPNLRVESGQGL 73 >3ND6-A nrPDB Length = 171 Score = 36.0 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 9/82 (10%) Query: 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHR 66 + L GSF+P+TN HL L E + + II + K+ P + Sbjct: 1 MRKIALFPGSFDPMTNGHLNLIERSAKLF--------DEVIIGVFINTSKQTLFTPEEKK 52 Query: 67 VIMAELATKNSKWVEVDTWESL 88 ++ E ATK V V E+ Sbjct: 53 YLIEE-ATKEMPNVRVIMQETQ 73 >5JBN-A nrPDB Length = 170 Score = 32.9 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 G+F+PITN H+ + A + +I + + KK + RV +A+ AT Sbjct: 12 GTFDPITNGHIDIVTRAT---------QMFDHVILAIAASPSKKPMFTLEERVALAQQAT 62 Query: 75 KNSKWVEVDTWESLQKEW 92 + VEV + L + Sbjct: 63 AHLGNVEVVGFSDLMANF 80 >6G7T-A nrPDB Length = 163 Score = 32.9 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Query: 10 VLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIM 69 + GSF+P+T H+ +FE A + +++ + + K G+ R+ M Sbjct: 5 GAVCPGSFDPVTLGHVDIFERAAA--------QFDEVVVAILVNP-AKTGMFDLDERIAM 55 Query: 70 AELATKNSKWVEV 82 + +T + + V Sbjct: 56 VKESTTHLPNLRV 68 >3NBK-A nrPDB Length = 177 Score = 32.9 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Query: 10 VLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIM 69 + GSF+P+T H+ +FE A + +++ + + K G+ R+ M Sbjct: 23 GAVCPGSFDPVTLGHVDIFERAAA--------QFDEVVVAILVNP-AKTGMFDLDERIAM 73 Query: 70 AELATKNSKWVEV 82 + +T + + V Sbjct: 74 VKESTTHLPNLRV 86 >1N1D-A nrPDB Length = 129 Score = 32.6 bits (72), Expect = 0.20, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 11 LLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMA 70 ++ G+F+ + H++L E AK G Y VV +KK HR ++ Sbjct: 4 VITYGTFDLLHWGHIKLLERAK----QLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLIL 59 Query: 71 ELATKNSKWVEVDTWESLQKE 91 E + + WE +++ Sbjct: 60 ETIRYVDEVIPEKNWEQKKQD 80 >1OD6-A nrPDB Length = 160 Score = 31.4 bits (69), Expect = 0.45, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 11/110 (10%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKG--LIPAYHRVIMAEL 72 GSF+P+TN HL + + A + + + V + K+G L A R+ + Sbjct: 7 GSFDPLTNGHLDVIQRAS---------RLFEKVTVAVLENPSKRGQYLFSAEERLAIIRE 57 Query: 73 ATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLER 122 AT + VE T+ L ++ + + SD +++ L R Sbjct: 58 ATAHLANVEAATFSGLLVDFVRRVGAQAIVKGLRAVSDYEYELQMAHLNR 107 >5LD2-D nrPDB Length = 609 Score = 31.4 bits (69), Expect = 0.50, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 22/120 (18%) Query: 158 DLLESFAVPNLWKSEDITQIVANYGLICVTRAG--------NDAQKFIYESDVLWKHRSN 209 DLL++ A P+L I Q Y L+C R G ++F+ + + +H + Sbjct: 421 DLLQARAEPDL-----IIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHS 475 Query: 210 -------IHVVNEWIANDISSTKIRRAL--RRGQSIRYLVPDLVQEYIEKHNLYSSESED 260 + + A + + I AL +G + + +PD + ++ L E+ Sbjct: 476 RWYEGRPVMIARNDSALGLFNGDIGIALDRGQGTRVWFAMPDGNIKSVQPSRLPEHETTW 535 >4GOX-A nrPDB Length = 313 Score = 31.0 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 189 AGNDAQKFIY-ESDVLWKHRSNIHVVNEWIANDISSTKIR--RALRRGQSIRYLVPDLV 244 + + I S++L+ IH+V A S T++R + L Q Y + + + Sbjct: 130 PSYGSDRHILDHSEILFDQAKYIHLVRHPYAVIESFTRLRMDKLLGAEQQNPYALAESI 188 >4MAF-A nrPDB Length = 404 Score = 31.0 bits (68), Expect = 0.65, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 51/172 (29%), Gaps = 38/172 (22%) Query: 18 NPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIP------AYHRVI--- 68 NP+ N H L + + G Y ++ P+G Y K +P + +V+ Sbjct: 202 NPVHNGHALLMTDTRKRLLEMG-YKNPVLLLHPLG-GYTKADDVPLDWRMKQHEKVLEDG 259 Query: 69 -----MAELATKNSKWVEVDTWESLQKEWKETLKV---------------LRHHQEKLEA 108 ++ S E +W ++ + H EK + Sbjct: 260 VLDPETTVVSIFPSPMHYAGPTE---VQWHAKARINAGANFYIVGRDPAGMSHPVEKRDL 316 Query: 109 SDCDHQQN----SPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCG 156 D DH + +P LER D +Q K + G Sbjct: 317 YDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRPQDFLFISG 368 >4NAH-A nrPDB Length = 160 Score = 30.6 bits (67), Expect = 0.69, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 9/82 (10%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 GSF+PIT HL + E + D + I V KK+G R+ + E + Sbjct: 10 GSFDPITYGHLDIIERSTDRFDE---------IHVCVLKNSKKEGTFSLEERMDLIEQSV 60 Query: 75 KNSKWVEVDTWESLQKEWKETL 96 K+ V+V + L ++ E + Sbjct: 61 KHLPNVKVHQFSGLLVDYCEQV 82 >1D0M-A nrPDB Length = 322 Score = 30.2 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 72/232 (31%), Gaps = 22/232 (9%) Query: 51 VGDAYKKKGLIPAYHRVIMAELATKNSKWVEV-------DTWESLQKEWKETLKVLRHHQ 103 + A++ G+ P +I+ + + +W V D +L + + Sbjct: 102 LNRAWQVYGVPP---EIIVGIIGVET-RWGRVMGKTRILDALATLSFNYPRRAEYFSGEL 157 Query: 104 EKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESF 163 E D Q + L+ S K + L D + S Sbjct: 158 ETFLLMARDEQDDPLNLKGSFAGAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSV 217 Query: 164 AVP---NLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIAND 220 A + W D ++AN +A F + + + + + + N Sbjct: 218 ANYFKAHGWVKGDQVAVMAN------GQAPGLPNGFKTKYSISQLAAAGL-TPQQPLGNH 270 Query: 221 ISSTKIRRALRRGQSIRYLVPDLVQEYIEKHNLYSSESEDR-NAGVILAPLQ 271 ++ +R + G Y +P+ H+ + + + + V LA +Q Sbjct: 271 QQASLLRLDVGTGYQYWYGLPNFYTITRYNHSTHYAMAVWQLGQAVALARVQ 322 >1O6B-A nrPDB Length = 169 Score = 29.5 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 9/108 (8%) Query: 15 GSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELAT 74 GSF+P+T HL + + + + + V + KK L R + T Sbjct: 9 GSFDPVTYGHLDIIKRGA---------HIFEQVYVCVLNNSSKKPLFSVEERCELLREVT 59 Query: 75 KNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLER 122 K+ + V+T + L ++ + SD +++ ++ R Sbjct: 60 KDIPNITVETSQGLLIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNR 107 >6JOG-A nrPDB Length = 163 Score = 29.5 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 9/135 (6%) Query: 11 LLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMA 70 ++ G+F+PITN H+ L A + ++ + + K L RV +A Sbjct: 6 VIYPGTFDPITNGHVDLVTRAS---------RMFDEVVVAIAIGHHKNPLFSLEERVALA 56 Query: 71 ELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWT 130 + + + VE ++ L + + K + SD +++ + R Sbjct: 57 QSSLGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEA 116 Query: 131 ETQDSSQKKSLEPKT 145 S++ S T Sbjct: 117 VFLTPSEQYSFISST 131 >3PXU-A nrPDB Length = 170 Score = 27.9 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 59/170 (34%), Gaps = 12/170 (7%) Query: 9 VVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVI 68 VV + G+F+P+T H L A ++ ++ V D+ KK R+ Sbjct: 6 VVAVYPGTFDPLTRGHEDLVRRAS---------SIFDTLVVGVADSRAKKPFFSLEERLK 56 Query: 69 MAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRK 128 +A + V+V + L K++ + SD +++ + R Sbjct: 57 IANEVLGHYPNVKVMGFTGLLKDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDV 116 Query: 129 WTETQDSSQKKSLEPKTKAVPKVKLLCGADLLE-SFAVPNLWKSEDITQI 177 T S + T +L G D+ + F W +E + + Sbjct: 117 ETMFMTPSDQYQFISGTIVREIAQL--GGDVSKFVFPSVEKWLTEKVAAM 164 >5Y0R-A nrPDB Length = 425 Score = 27.5 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 15/38 (39%) Query: 17 FNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA 54 +NP N HL A++ + V+ G G+ Sbjct: 10 YNPFHNGHLYHLTSARELVKPDYTIAVMSGNFCQRGEP 47 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.116 0.298 Lambda K H 0.267 0.0349 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,571,045 Number of Sequences: 36641 Number of extensions: 330073 Number of successful extensions: 1009 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 951 Number of HSP's gapped (non-prelim): 62 length of query: 279 length of database: 10,336,785 effective HSP length: 96 effective length of query: 183 effective length of database: 6,819,249 effective search space: 1247922567 effective search space used: 1247922567 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.2 bits)