BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9H5Q4 (396 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6ERQ-F nrPDB 779 0.0 6ERO-A nrPDB 624 e-179 4GC9-A nrPDB 56 3e-08 3FUV-A nrPDB 42 7e-04 1ZQ9-A nrPDB 40 0.002 3Q8X-B nrPDB 39 0.003 6IFX-A nrPDB 38 0.008 6IFV-A nrPDB 38 0.008 3GRV-A nrPDB 37 0.016 3FYD-A nrPDB 36 0.025 2H1R-A nrPDB 35 0.079 1WY7-A nrPDB 33 0.28 1AT3-A nrPDB 32 0.44 >6ERQ-F nrPDB Length = 377 Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/376 (99%), Positives = 375/376 (99%) Query: 21 GRFCILGSEAATRKHLPARNHCGLSDSSPQLWPEPDFRNPPRKASKASLDFKRYVTDRRL 80 RFCILGSEAATRKHLPARNHCGLSDSSPQLWPEPDFRNPPRKASKASLDFKRYVTDRRL Sbjct: 2 ARFCILGSEAATRKHLPARNHCGLSDSSPQLWPEPDFRNPPRKASKASLDFKRYVTDRRL 61 Query: 81 AETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNL 140 AETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNL Sbjct: 62 AETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNL 121 Query: 141 DGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGE 200 DGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGE Sbjct: 122 DGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGE 181 Query: 201 KRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEI 260 KRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEI Sbjct: 182 KRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEI 241 Query: 261 KVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIF 320 KVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIF Sbjct: 242 KVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIF 301 Query: 321 FHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERS 380 FHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERS Sbjct: 302 FHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERS 361 Query: 381 KDCAYKWLYDETLEDR 396 KDCAYKWLYDETLEDR Sbjct: 362 KDCAYKWLYDETLEDR 377 >6ERO-A nrPDB Length = 313 Score = 624 bits (1610), Expect = e-179, Method: Compositional matrix adjust. Identities = 309/334 (92%), Positives = 309/334 (92%), Gaps = 23/334 (6%) Query: 63 KASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVA 122 KASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVA Sbjct: 3 KASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVA 62 Query: 123 LESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVP 182 LESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVP Sbjct: 63 LESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVP 122 Query: 183 WTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPG 242 WTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPG Sbjct: 123 WTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPG 182 Query: 243 NPDLYHVLSVIWQLACEIKVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMI 302 NPDLYHVLSVIWQLACEIKVLHMEP SS KLYLIQMI Sbjct: 183 NPDLYHVLSVIWQLACEIKVLHMEPGSS-----------------------GKLYLIQMI 219 Query: 303 PRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKV 362 PRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKV Sbjct: 220 PRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKV 279 Query: 363 VNMHPQDFKTLFETIERSKDCAYKWLYDETLEDR 396 VNMHPQDFKTLFETIERSKDCAYKWLYDETLEDR Sbjct: 280 VNMHPQDFKTLFETIERSKDCAYKWLYDETLEDR 313 >4GC9-A nrPDB Length = 345 Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 34/203 (16%) Query: 75 VTDR--RLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAG-AKVVALESDKTFIP 131 +TD+ R A +LA +Y+ E PGPG +T+++L A A+++ +E D FIP Sbjct: 43 LTDKIVRKAGSLADVYV----------YEVGPGPGGITRSILNANVAELLVVEKDTRFIP 92 Query: 132 HLESLGKNLDGKLRVIHCDF--FKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIP- 188 L+ L GKLR++H D +K++ G I+ W D P Sbjct: 93 GLQMLSDAAPGKLRIVHGDVLTYKIEKAFPGNIR-----------------RQWEDDPPN 135 Query: 189 LKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYH 248 + ++G P + K ++ + +GR ++ + ++ ++L+A G+ + Sbjct: 136 VHIIGNLPFSVSTPLIIKWLENISLKDGPFVYGRTKMTLTFQKEVAERLVATTGSKQ-HS 194 Query: 249 VLSVIWQLACEIKVLHMEPWSSF 271 LS++ Q C ++ L P +F Sbjct: 195 RLSIMAQYLCNVEHLFTIPGKAF 217 >3FUV-A nrPDB Length = 271 Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 64/223 (28%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDG-KLRVIHCDFFKLDPR 157 + E PG G LT+ALLEAGA+V A+E D P LE + L G +R++ D Sbjct: 50 VFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLE---ETLSGLPVRLVFQD------- 99 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 ++ P +G +L + +P+ PL T + Sbjct: 100 --ALLYPWEEVPQG---SLLVANLPYHIATPL------------------------VTRL 130 Query: 218 YKFGRIEVNMFIGEKEF-QKLMADPGNPDLYHVLSV-IWQLACEIKVLHMEP-------- 267 K GR +F+ +KE +++ A P P Y VL++ + A ++ + P Sbjct: 131 LKTGRFARLVFLVQKEVAERMTARPKTPA-YGVLTLRVAHHAVAERLFDLPPGAFFPPPK 189 Query: 268 -WSSFDIYTRKGPLENP------------KRRELLDQLQQKLY 297 WSS T G L++P +R+ LL+ L Y Sbjct: 190 VWSSLVRLTPTGALDDPGLFRLVEAAFGKRRKTLLNALAAAGY 232 >1ZQ9-A nrPDB Length = 285 Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Query: 94 RPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIP--HLESLGKNLDGKLRVIHCDF 151 RP ++LE PG G +T LLE KVVA E D + H G + KL+V+ D Sbjct: 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 Query: 152 FKLD 155 K D Sbjct: 87 LKTD 90 >3Q8X-B nrPDB Length = 287 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 49/225 (21%), Positives = 93/225 (41%), Gaps = 36/225 (16%) Query: 69 LDFKRYVTDRRLAETLAQIYLGKPS--RPPHLLLECNPGPG---ILTQALLEAGAKVVAL 123 ++F + RL + L ++ GK + P LL PG G + + E V+ + Sbjct: 5 VNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVI 64 Query: 124 ESDKTFIPHLESLGKNLDGKLRVIHCDFFK-LDPRSGGVIKP--PAMSSRGLFKNLGIEA 180 ++D H N D +++ D K + P S + + +S +G NL IE Sbjct: 65 DNDTFKQQH-----PNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGY--NLVIEG 117 Query: 181 VPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKE-FQKLMA 239 T D+P++ M ++G + ++ +A ++N ++G E ++ + A Sbjct: 118 TGRTTDVPIQTATMLQAKGYETKMYVMAVP-------------KINSYLGTIERYETMYA 164 Query: 240 DP-----GNPDLYHVLSVIWQLACEIKVLHMEP-WSSFDIYTRKG 278 D P H + V+ L ++ LH +S +Y R+G Sbjct: 165 DDPMTARATPKQAHDI-VVKNLPTNLETLHKTGLFSDIRLYNREG 208 >6IFX-A nrPDB Length = 287 Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRS 158 ++E PG G LT+ L + KVVA E D+ +P L+ + + VIH D K D +S Sbjct: 52 VIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLSPYEN-VTVIHQDVLKADVKS 110 >6IFV-A nrPDB Length = 215 Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRS 158 ++E PG G LT+ L + KVVA E D+ +P L+ + + VIH D K D +S Sbjct: 52 VIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILKDTLSPYEN-VTVIHQDVLKADVKS 110 >3GRV-A nrPDB Length = 295 Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 39/174 (22%) Query: 98 LLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPR 157 ++LE G GILT+ L + KV +E DK+ P+ L K L + +I D K+D Sbjct: 53 VVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKL-KELYNNIEIIWGDALKVDLN 111 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 L N + +P+ P+ L K +DL Sbjct: 112 K-------------LDFNKVVANLPYQISSPITF-----------KLIKRGFDLAVLMYQ 147 Query: 218 YKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSF 271 Y+F + +++A G D Y LSV Q +++++ P S+F Sbjct: 148 YEFAK-------------RMVAAAGTKD-YGRLSVAVQSRADVEIVAKVPPSAF 187 >3FYD-A nrPDB Length = 263 Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust. Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 39/174 (22%) Query: 98 LLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPR 157 ++LE G GILT+ L + KV +E DK+ P+ L K L + +I D K+D Sbjct: 24 VVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKL-KELYNNIEIIWGDALKVDLN 82 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 L N + +P+ P+ L K +DL Sbjct: 83 K-------------LDFNKVVANLPYQISSPITF-----------KLIKRGFDLAVLMYQ 118 Query: 218 YKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSF 271 Y+F + +++A G D Y LSV Q +++++ P S+F Sbjct: 119 YEFAK-------------RMVAAAGTKD-YGRLSVAVQSRADVEIVAKVPPSAF 158 >2H1R-A nrPDB Length = 299 Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust. Identities = 58/253 (22%), Positives = 106/253 (41%), Gaps = 61/253 (24%) Query: 84 LAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGK 143 L +I + ++LE G G LT LL KV+ ++ D I + K Sbjct: 31 LDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEV---------K 81 Query: 144 LRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRA 203 R ++ + L+ G IK +F + TA+IP K+ Sbjct: 82 KRCLYEGYNNLEVYEGDAIKT-------VFPKFDV----CTANIPYKISS---------- 120 Query: 204 LWKLAYDLYSCTSIYKFGRIEVNMFIGEKEF-QKLMADPGNPDLYHVLSVIWQLACEIKV 262 L + L S ++K V MF +KEF ++++A+ G+ + Y L++ +L C++ Sbjct: 121 --PLIFKLISHRPLFKCA---VLMF--QKEFAERMLANVGDSN-YSRLTINVKLFCKVTK 172 Query: 263 LHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIFFH 322 + SSF NP + +D + ++++IP+++ F N + + Sbjct: 173 VCNVNRSSF----------NPPPK--VDSV-----IVKLIPKESSFLTNFDEWD-----N 210 Query: 323 LLKHCFGRRSATV 335 LL+ CF R+ T+ Sbjct: 211 LLRICFSRKRKTL 223 >1WY7-A nrPDB Length = 207 Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 21/125 (16%) Query: 48 SPQLWPEPDFRNPPRKASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPG 107 +P++W E +R P AS+ LA +L I ++ + G G Sbjct: 20 NPKVWLE-QYRTPGNAASELLW----------LAYSLGDI-------EGKVVADLGAGTG 61 Query: 108 ILTQALLEAGAK-VVALESDKTFIPHL-ESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPP 165 +L+ L GAK V+ +E DK + L E+LG+ GK +V D + + R VI P Sbjct: 62 VLSYGALLLGAKEVICVEVDKEAVDVLIENLGE-FKGKFKVFIGDVSEFNSRVDIVIMNP 120 Query: 166 AMSSR 170 S+ Sbjct: 121 PFGSQ 125 >1AT3-A nrPDB Length = 247 Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 12/91 (13%) Query: 256 LACEIKVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLI-QMIPRQNLFTK---N 311 +AC +E +S I+ R+GP L + ++ LYLI +P +L TK + Sbjct: 86 IACVQLERVLETAASAAIFERRGPA--------LSREERLLYLITNYLPSVSLSTKRRGD 137 Query: 312 LTPMNYNIFFHLLKHCFGRRSATVIDHLRSL 342 P + +F H+ GRR T++ + SL Sbjct: 138 EVPPDRTLFAHVALCAIGRRLGTIVTYDTSL 168 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6ERQ-F nrPDB 683 0.0 6ERO-A nrPDB 547 e-156 4GC9-A nrPDB 201 6e-52 3FUV-A nrPDB 151 7e-37 Sequences not found previously or not previously below threshold: 4JXJ-A nrPDB 73 2e-13 6IFV-A nrPDB 71 9e-13 3TQS-A nrPDB 69 3e-12 6IFX-A nrPDB 61 8e-10 1ZQ9-A nrPDB 59 4e-09 1QYR-A nrPDB 56 4e-08 3UZU-A nrPDB 55 6e-08 3GRV-A nrPDB 52 3e-07 3FYD-A nrPDB 52 3e-07 2H1R-A nrPDB 46 3e-05 1WY7-A nrPDB 38 0.006 1I4W-A nrPDB 37 0.021 3R9X-B nrPDB 35 0.046 3DMF-A nrPDB 34 0.11 5WQO-A nrPDB 32 0.37 5HJK-A nrPDB 32 0.56 2BKL-A nrPDB 30 1.4 2RHI-A nrPDB 30 2.0 2FR7-A nrPDB 30 2.5 >6ERQ-F nrPDB Length = 377 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 375/376 (99%), Positives = 375/376 (99%) Query: 21 GRFCILGSEAATRKHLPARNHCGLSDSSPQLWPEPDFRNPPRKASKASLDFKRYVTDRRL 80 RFCILGSEAATRKHLPARNHCGLSDSSPQLWPEPDFRNPPRKASKASLDFKRYVTDRRL Sbjct: 2 ARFCILGSEAATRKHLPARNHCGLSDSSPQLWPEPDFRNPPRKASKASLDFKRYVTDRRL 61 Query: 81 AETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNL 140 AETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNL Sbjct: 62 AETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNL 121 Query: 141 DGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGE 200 DGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGE Sbjct: 122 DGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGE 181 Query: 201 KRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEI 260 KRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEI Sbjct: 182 KRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEI 241 Query: 261 KVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIF 320 KVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIF Sbjct: 242 KVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIF 301 Query: 321 FHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERS 380 FHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERS Sbjct: 302 FHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERS 361 Query: 381 KDCAYKWLYDETLEDR 396 KDCAYKWLYDETLEDR Sbjct: 362 KDCAYKWLYDETLEDR 377 >6ERO-A nrPDB Length = 313 Score = 547 bits (1410), Expect = e-156, Method: Composition-based stats. Identities = 309/334 (92%), Positives = 309/334 (92%), Gaps = 23/334 (6%) Query: 63 KASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVA 122 KASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVA Sbjct: 3 KASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVA 62 Query: 123 LESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVP 182 LESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVP Sbjct: 63 LESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVP 122 Query: 183 WTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPG 242 WTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPG Sbjct: 123 WTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPG 182 Query: 243 NPDLYHVLSVIWQLACEIKVLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMI 302 NPDLYHVLSVIWQLACEIKVLHMEP SS KLYLIQMI Sbjct: 183 NPDLYHVLSVIWQLACEIKVLHMEPGSS-----------------------GKLYLIQMI 219 Query: 303 PRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKV 362 PRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKV Sbjct: 220 PRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVIDHLRSLTPLDARDILMQIGKQEDEKV 279 Query: 363 VNMHPQDFKTLFETIERSKDCAYKWLYDETLEDR 396 VNMHPQDFKTLFETIERSKDCAYKWLYDETLEDR Sbjct: 280 VNMHPQDFKTLFETIERSKDCAYKWLYDETLEDR 313 >4GC9-A nrPDB Length = 345 Score = 201 bits (510), Expect = 6e-52, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 34/204 (16%) Query: 75 VTDR--RLAETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAG-AKVVALESDKTFIP 131 +TD+ R A +LA +Y+ E PGPG +T+++L A A+++ +E D FIP Sbjct: 43 LTDKIVRKAGSLADVYV----------YEVGPGPGGITRSILNANVAELLVVEKDTRFIP 92 Query: 132 HLESLGKNLDGKLRVIHCDF--FKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIP- 188 L+ L GKLR++H D +K++ G I+ W D P Sbjct: 93 GLQMLSDAAPGKLRIVHGDVLTYKIEKAFPGNIR-----------------RQWEDDPPN 135 Query: 189 LKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYH 248 + ++G P + K ++ + +GR ++ + ++ ++L+A G+ + Sbjct: 136 VHIIGNLPFSVSTPLIIKWLENISLKDGPFVYGRTKMTLTFQKEVAERLVATTGSKQ-HS 194 Query: 249 VLSVIWQLACEIKVLHMEPWSSFD 272 LS++ Q C ++ L P +F Sbjct: 195 RLSIMAQYLCNVEHLFTIPGKAFV 218 >3FUV-A nrPDB Length = 271 Score = 151 bits (380), Expect = 7e-37, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 90/223 (40%), Gaps = 64/223 (28%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDG-KLRVIHCDFFKLDPR 157 + E PG G LT+ALLEAGA+V A+E D P LE + L G +R++ D Sbjct: 50 VFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLE---ETLSGLPVRLVFQD------- 99 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 ++ P +G +L + +P+ PL T + Sbjct: 100 --ALLYPWEEVPQG---SLLVANLPYHIATPL------------------------VTRL 130 Query: 218 YKFGRIEVNMFIGEKEF-QKLMADPGNPDLYHVLSV-IWQLACEIKVLHMEP-------- 267 K GR +F+ +KE +++ A P P Y VL++ + A ++ + P Sbjct: 131 LKTGRFARLVFLVQKEVAERMTARPKTPA-YGVLTLRVAHHAVAERLFDLPPGAFFPPPK 189 Query: 268 -WSSFDIYTRKGPLENP------------KRRELLDQLQQKLY 297 WSS T G L++P +R+ LL+ L Y Sbjct: 190 VWSSLVRLTPTGALDDPGLFRLVEAAFGKRRKTLLNALAAAGY 232 >4JXJ-A nrPDB Length = 276 Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 58/280 (20%) Query: 99 LLECNPGPGILTQALLEAGAK-VVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPR 157 +LE PG G LT+++L K + +E+D+ IP L + + L +I D KL Sbjct: 54 VLEIGPGTGGLTRSILHKNPKLLTVIETDERCIPLLNEIKQYHPN-LNIIKQDALKL--- 109 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 +S K I +P+ L + + + S Sbjct: 110 --------KLSDLNTNKITIISNLPYHIGTEL--------------VIRWLKESSLVAS- 146 Query: 218 YKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSFDIYTRK 277 + + + ++ +++ A P Y LSVI L ++ FD+ Sbjct: 147 -------MTLMLQKEVVERICAKPSTKA-YGRLSVICSLIATVE-------KCFDV-APT 190 Query: 278 GPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVID 337 PK + +L ++ IP +L +K + K F R + Sbjct: 191 AFYPPPKVYSAIVKLTP----LENIPNSDLISK---------VELITKMAFAGRRKMIKS 237 Query: 338 HLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETI 377 L++L P + ++L ++ ++ + N+ P D+ +L I Sbjct: 238 SLKNLAP-NISELLAKLNISDNCRAENLTPNDYLSLASLI 276 >6IFV-A nrPDB Length = 215 Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 33/176 (18%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLD--GKLRVIHCDFFKLDP 156 ++E PG G LT+ L + KVVA E D+ +P L+ L + VIH D K D Sbjct: 52 VIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILK---DTLSPYENVTVIHQDVLKADV 108 Query: 157 RSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTS 216 +S + + + VV P + KL + Sbjct: 109 KS-------------------VIEEQFQDCDEIMVVANLPYYVTTPIIMKLLEEHLPLKG 149 Query: 217 IYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSFD 272 I + + ++ +++ ADP + + Y LS+ Q E K + + P + F Sbjct: 150 IV--------VMLQKEVAERMAADPSSKE-YGSLSIAVQFYTEAKTVMIVPKTVFV 196 >3TQS-A nrPDB Length = 255 Score = 69.4 bits (168), Expect = 3e-12, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 92/246 (37%), Gaps = 58/246 (23%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRS 158 L+E PG G LT LL + +E D+ + L+ N + + D + D S Sbjct: 33 LVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQK-KYNQQKNITIYQNDALQFDFSS 91 Query: 159 GGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIY 218 D PL+VVG P L+ L ++ Sbjct: 92 V------------------------KTDKPLRVVGNLPYNISTPLLFHLFSQIHCIE--- 124 Query: 219 KFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSFDIYTRKG 278 +++ + ++ +++ A+ G+ D Y LSV+ Q C+ L +F T Sbjct: 125 -----DMHFMLQKEVVRRITAEVGSHD-YGRLSVMAQYFCDNTYLFTVSPQAF---TPPP 175 Query: 279 PLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNI--FFHLLKHCFGRRSATVI 336 +E+ +I++IPR N TP+ N+ H++K F R TV Sbjct: 176 RVESA--------------IIRLIPRH-----NFTPVAKNLDQLSHVVKEAFSYRRKTVG 216 Query: 337 DHLRSL 342 + L+ L Sbjct: 217 NALKKL 222 >6IFX-A nrPDB Length = 287 Score = 61.3 bits (147), Expect = 8e-10, Method: Composition-based stats. Identities = 47/238 (19%), Positives = 84/238 (35%), Gaps = 58/238 (24%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLD--GKLRVIHCDFFKLDP 156 ++E PG G LT+ L + KVVA E D+ +P L+ L + VIH D K D Sbjct: 52 VIEIGPGIGALTEQLAKRAKKVVAFEIDQRLLPILK---DTLSPYENVTVIHQDVLKADV 108 Query: 157 RSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTS 216 +S + + + VV P + KL + Sbjct: 109 KS-------------------VIEEQFQDCDEIMVVANLPYYVTTPIIMKLLEEHLPLKG 149 Query: 217 IYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSFDIYTR 276 I + + ++ +++ + LS+ Q E K + + P + F Sbjct: 150 IV--------VMLQKEVAERMANTKRS------LSIAVQFYTEAKTVMIVPKTVFV---P 192 Query: 277 KGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIFFHLLKHCFGRRSAT 334 + +++ +I++I R + N + FF L+K F +R T Sbjct: 193 QPNVDSA--------------VIRLILRDG---PAVDVENESFFFQLIKASFAQRRKT 233 >1ZQ9-A nrPDB Length = 285 Score = 58.6 bits (140), Expect = 4e-09, Method: Composition-based stats. Identities = 49/198 (24%), Positives = 68/198 (34%), Gaps = 50/198 (25%) Query: 94 RPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLD--GKLRVIHCDF 151 RP ++LE PG G +T LLE KVVA E D + L + KL+V+ D Sbjct: 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 Query: 152 FKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDL 211 K D +P+ V P + ++KL Sbjct: 87 LKTD-------------------------LPFFD----TCVANLPYQISSPFVFKLLLHR 117 Query: 212 YSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVL-------H 264 F R + MF + +L+A PG+ LY LS+ QL + L Sbjct: 118 P-------FFRCAILMF-QREFALRLVAKPGDK-LYCRLSINTQLLARVDHLMKVGKNNF 168 Query: 265 MEP---WSSFDIYTRKGP 279 P SS K P Sbjct: 169 RPPPKVESSVVRIEPKNP 186 >1QYR-A nrPDB Length = 252 Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 42/195 (21%) Query: 99 LLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPRS 158 ++E PG LT+ + E ++ +E D+ L++ Sbjct: 25 MVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHP--------------------- 63 Query: 159 GGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIY 218 + P + + PL+V G P ++ L Y Sbjct: 64 --FLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFS--------Y 113 Query: 219 KFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACE-IKVLHMEPW--------- 268 +++ + ++ +L+A P + Y LSV+ Q C I VL + P Sbjct: 114 TDAIADMHFMLQKEVVNRLVAGPNSKA-YGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVD 172 Query: 269 SSFDIYTRKGPLENP 283 S+ + +P Sbjct: 173 SAVVRLVPHATMPHP 187 >3UZU-A nrPDB Length = 279 Score = 54.7 bits (130), Expect = 6e-08, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 48/207 (23%) Query: 91 KPSRPPHLLLECNPGPGILTQALL----EAGAKVVALESDKTFIPHLESLGKNLDGKLRV 146 +P R ++ E PG G LT ++ G+ + A+E D+ I LE L L + Sbjct: 39 RPERGERMV-EIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGEL---LEL 94 Query: 147 IHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWK 206 D D G + +P + L+++G P L+ Sbjct: 95 HAGDALTFD--FGSIARPG-------------------DEPSLRIIGNLPYNISSPLLFH 133 Query: 207 LAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQL-ACEIKVLHM 265 L I+ + + + ++++A+PG + LSV+ Q K++ + Sbjct: 134 LMSFAPVV--------IDQHFMLQNEVVERMVAEPGTKA-FSRLSVMLQYRYVMDKLIDV 184 Query: 266 EPW---------SSFDIYTRKGPLENP 283 P S+ P E P Sbjct: 185 PPESFQPPPKVDSAIVRMIPHAPHELP 211 >3GRV-A nrPDB Length = 295 Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 39/174 (22%) Query: 98 LLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPR 157 ++LE G GILT+ L + KV +E DK+ P+ L + L + +I D K+D Sbjct: 53 VVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVD-- 109 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 L N + +P+ P+ L K +DL Sbjct: 110 -----------LNKLDFNKVVANLPYQISSPI-----------TFKLIKRGFDLAV---- 143 Query: 218 YKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSF 271 + + ++++A G D Y LSV Q +++++ P S+F Sbjct: 144 ---------LMYQYEFAKRMVAAAGTKD-YGRLSVAVQSRADVEIVAKVPPSAF 187 >3FYD-A nrPDB Length = 263 Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 39/174 (22%) Query: 98 LLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPR 157 ++LE G GILT+ L + KV +E DK+ P+ L + L + +I D K+D Sbjct: 24 VVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVD-- 80 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 L N + +P+ P+ L K +DL Sbjct: 81 -----------LNKLDFNKVVANLPYQISSPI-----------TFKLIKRGFDLAV---- 114 Query: 218 YKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSF 271 + + ++++A G D Y LSV Q +++++ P S+F Sbjct: 115 ---------LMYQYEFAKRMVAAAGTKD-YGRLSVAVQSRADVEIVAKVPPSAF 158 >2H1R-A nrPDB Length = 299 Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 99/254 (38%), Gaps = 59/254 (23%) Query: 82 ETLAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLD 141 L +I + ++LE G G LT LL KV+ ++ D I + Sbjct: 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEV-------- 80 Query: 142 GKLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEK 201 K R ++ + L+ G IK + ++ +P+ PL Sbjct: 81 -KKRCLYEGYNNLEVYEGDAIK-----TVFPKFDVCTANIPYKISSPL-----IFKLISH 129 Query: 202 RALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIK 261 R L+K A + ++ ++++A+ G+ + Y L++ +L C++ Sbjct: 130 RPLFKCA-----------------VLMFQKEFAERMLANVGDSN-YSRLTINVKLFCKVT 171 Query: 262 VLHMEPWSSFDIYTRKGPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIFF 321 + SSF NP + ++++IP+++ F LT N++ + Sbjct: 172 KVCNVNRSSF----------NPPPKV-------DSVIVKLIPKESSF---LT--NFDEWD 209 Query: 322 HLLKHCFGRRSATV 335 +LL+ CF R+ T+ Sbjct: 210 NLLRICFSRKRKTL 223 >1WY7-A nrPDB Length = 207 Score = 38.2 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 73/201 (36%), Gaps = 32/201 (15%) Query: 48 SPQLWPEPDFRNPPRKASKASLDFKRYVTDRRLAETLAQIYLGKPSRPPHLLLECNPGPG 107 +P++W E +R P AS+ LA +L I ++ + G G Sbjct: 20 NPKVWLE-QYRTPGNAASELLW----------LAYSLGDI-------EGKVVADLGAGTG 61 Query: 108 ILTQALLEAGA-KVVALESDKTFIPHL-ESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPP 165 +L+ L GA +V+ +E DK + L E+LG+ GK +V D + + R VI P Sbjct: 62 VLSYGALLLGAKEVICVEVDKEAVDVLIENLGE-FKGKFKVFIGDVSEFNSRVDIVIMNP 120 Query: 166 AMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGR--- 222 S+ + + + + + K + + R Sbjct: 121 PFGSQRKHADRPFLLKAFEISDVVYSIHL-----AKPEVRRFIEKFSWEHGFVVTHRLTT 175 Query: 223 ---IEVNMFIGEKEFQKLMAD 240 I + F K+ +++ D Sbjct: 176 KIEIPLQFFFHRKKLERITVD 196 >1I4W-A nrPDB Length = 353 Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 27/59 (45%) Query: 184 TADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQKLMADPG 242 + V G + + + + + +Y+FG++++ +++ +KL+A PG Sbjct: 139 HINDKFLTVANVTGEGSEGLIMQWLSCIGNKNWLYRFGKVKMLLWMPSTTARKLLARPG 197 >3R9X-B nrPDB Length = 248 Score = 35.5 bits (80), Expect = 0.046, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 102/283 (36%), Gaps = 71/283 (25%) Query: 99 LLECNPGPGILTQALLEAG-AKVVALESDKTFIPHLESLGKNLDGKLRVIHCDFFKLDPR 157 ++E G G LT+ LL+ K+ +E D+ + +L+S+G +L VI+ D Sbjct: 34 VVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDE---RLEVINED------- 83 Query: 158 SGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKRALWKLAYDLYSCTSI 217 +S+ F +LG E LKVVG P + Y+ C + Sbjct: 84 ----------ASKFPFCSLGKE---------LKVVGNLPYNVASLIIENTVYN-KDCVPL 123 Query: 218 YKFGRIEVNMFIGEKEFQKLMADPGNPDLYHVLSVIWQLACEIKVLHMEPWSSFDIYTRK 277 F + ++ +KL LSV + ++ + Sbjct: 124 AVF-------MVQKEVAEKLQGKKDT----GWLSVFVRTFYDVNYVMTV----------- 161 Query: 278 GPLENPKRRELLDQLQQKLYLIQMIPRQNLFTKNLTPMNYNIFFHLLKHCFGRRSATVID 337 R + + + +I+++ + K+L NY F L F R Sbjct: 162 ------PPRFFVPPPKVQSAVIKLVKNEKFPVKDLK--NYKKF---LTKIFQNRRKV--- 207 Query: 338 HLRSLTPLDARDILMQIGKQEDEKVVNMHPQDFKTLFETIERS 380 LR P ++L + G D +V + +DF L+ IE S Sbjct: 208 -LRKKIP---EELLKEAGINPDARVEQLSLEDFFKLYRLIEDS 246 >3DMF-A nrPDB Length = 381 Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 27/63 (42%) Query: 89 LGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIH 148 LG +L+ G G LT L GA+VV +E D + L+ + K + +H Sbjct: 227 LGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALH 286 Query: 149 CDF 151 D Sbjct: 287 SDV 289 >5WQO-A nrPDB Length = 234 Score = 32.4 bits (72), Expect = 0.37, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 92 PSRPPHLLLECNPGPG---ILTQALLEAGAKVVALESDKTFIPHLESLGKNLDGKLRVIH 148 P H +L G L A L+ GA+V A+ P L++L + +L+ + Sbjct: 2 PLGSMHNVLIVGASRGIGLGLADAFLQRGAQVFAVARRPQGSPGLQALAERAGERLQAVT 61 Query: 149 CDFFKLD 155 D + D Sbjct: 62 GDLNQHD 68 >5HJK-A nrPDB Length = 352 Score = 31.6 bits (70), Expect = 0.56, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%) Query: 133 LESLGKNLDGKLRVIHCDFFKLDPRSGGVIKPPAMSSRGL 172 LE L GK+++IH D F++ P + + + +G+ Sbjct: 245 LELNRDRLKGKIKIIHGDVFEVLPNLPNFDRVVSPTPKGV 284 >2BKL-A nrPDB Length = 695 Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 21/144 (14%) Query: 143 KLRVIHCDFFKLDPRSGGVIKPPAMSSRGLFKNLGIEAVPWTADIPLKVVGMFPSRGEKR 202 + V+H K D + ++ + + N +PW + V GE Sbjct: 431 PMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYG 490 Query: 203 ALWKLAYDLYSCTSIYKFGRIEVNMFIGEKEFQ--KL-------------MADPGNPDLY 247 W A L +++ + +K Q +L A P+LY Sbjct: 491 KAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELY 550 Query: 248 HVLSVIWQLACEIKVLHMEPWSSF 271 + C + +L M + F Sbjct: 551 GAV------VCAVPLLDMVRYHLF 568 >2RHI-A nrPDB Length = 345 Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 18/123 (14%) Query: 33 RKHLPARNHCG---LSDSSPQLWPEPDFR------NPPRKASKASLDFKRYVTDRRLAET 83 R H + C ++ +SP + P F PP+ + + +Y+ R Sbjct: 78 RLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSWSQYLRSTRAQAA 137 Query: 84 LAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALES-----DKTFIPHLESLGK 138 +++ + PP L + + + +V + S D F+ H ++ Sbjct: 138 PKHLFVSQSHSPPPLGFQVGMKLEAVDR----MNPSLVCVASVTDVVDSRFLVHFDNWDD 193 Query: 139 NLD 141 D Sbjct: 194 TYD 196 >2FR7-A nrPDB Length = 412 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 84 LAQIYLGKPSRPPHLLLECNPGPGILTQALLEAGAKVVALESDKTFIPHLESLGKN 139 L+ KP RPP L+LE +P T+A+L +KV++ + K + Sbjct: 84 LSDFKKEKPWRPPSLILEADPPAHTRTRAVL---SKVLSPATMKRLRDGFAAAADA 136 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.129 0.374 Lambda K H 0.267 0.0395 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,512,576 Number of Sequences: 36641 Number of extensions: 632421 Number of successful extensions: 1581 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 1520 Number of HSP's gapped (non-prelim): 46 length of query: 396 length of database: 10,336,785 effective HSP length: 99 effective length of query: 297 effective length of database: 6,709,326 effective search space: 1992669822 effective search space used: 1992669822 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 60 (27.8 bits)