BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9H4G4 (154 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4AIW-A nrPDB 324 1e-89 1CFE-A nrPDB 75 2e-14 2EPF-A nrPDB 64 4e-11 1XX5-A nrPDB 62 7e-11 1WVR-A nrPDB 58 2e-09 1RC9-A nrPDB 56 7e-09 5ZHO-A nrPDB 30 0.53 5LSQ-A nrPDB 28 1.3 5T2H-A nrPDB 27 3.0 4NNZ-A nrPDB 27 3.1 5T2N-A nrPDB 27 3.6 4V6W-AT nrPDB 27 5.1 4Z9D-A nrPDB 25 9.8 >4AIW-A nrPDB Length = 154 Score = 324 bits (830), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 154/154 (100%), Positives = 154/154 (100%) Query: 1 MGKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSR 60 MGKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSR Sbjct: 1 MGKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSR 60 Query: 61 GQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120 GQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA Sbjct: 61 GQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120 Query: 121 SASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK 154 SASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK Sbjct: 121 SASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK 154 >1CFE-A nrPDB Length = 135 Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 8/133 (6%) Query: 12 EVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS 71 + L HN+ R + GV P+ NL AQ Y+ + A L HS GENLA Sbjct: 6 DYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA------GENLAKGG 59 Query: 72 YDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSFV 129 D TG+ W SE +YN+ G H+T +VW+N+ ++G G+A ++G F+ Sbjct: 60 GDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFI 119 Query: 130 VARYFPAGNVVNE 142 Y P GN + + Sbjct: 120 SCNYDPVGNWIGQ 132 >2EPF-A nrPDB Length = 210 Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 19/146 (13%) Query: 7 KQFHNEVLKAHNEYRQKHGVPPLKLCKNL-----NREAQQYSEALASTRILKHSPESSRG 61 K + E++ HN R+ V P +N+ N A Q ++ A HSP ++R Sbjct: 3 KNYQKEIVDKHNALRR--SVKPTA--RNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRT 58 Query: 62 ----QCGENLAWASYDQTGKEVADRWYSEIKNYNF----QQPGFTSGTGHFTAMVWKNTK 113 +CGEN+ +S V WY EIKN+ + + PG S GH+T +VW + Sbjct: 59 VGKLRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPG--SVIGHYTQVVWYKSH 116 Query: 114 KMGVGKASASDGSSFVVARYFPAGNV 139 +G A S V +Y PAGN+ Sbjct: 117 LIGCASAKCSSSKYLYVCQYCPAGNI 142 >1XX5-A nrPDB Length = 221 Score = 62.4 bits (150), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 21/147 (14%) Query: 7 KQFHNEVLKAHNEYRQKHGVPP-----LKLCKNLNREAQQYSEALASTRILKHSPESSRG 61 K+ E++ HN R++ V P LK+ EA +E A+T L HSP++ R Sbjct: 12 KKKQKEIVDLHNSLRRR--VSPTASNMLKM--EWYPEAASNAERWANTCSLNHSPDNLRV 67 Query: 62 ----QCGENLAWASYDQTGKEVADRWYSEIKNYNF----QQPGFTSGTGHFTAMVWKNTK 113 QCGE++ +S +T E+ W+ E KN+ + PG S TGH+T +VW T Sbjct: 68 LEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGANPPG--SVTGHYTQIVWYQTY 125 Query: 114 KMG--VGKASASDGSSFVVARYFPAGN 138 + G V +S S F V +Y P+GN Sbjct: 126 RAGCAVSYCPSSAWSYFYVCQYCPSGN 152 >1WVR-A nrPDB Length = 221 Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 9/142 (6%) Query: 8 QFHNEVLKAHNEYRQKHGVPPLKLCK-NLNREAQQYSEALASTRILKHSPESSRG----Q 62 + NE++ HN R+ + K EA +E A I HS SR + Sbjct: 13 EIQNEIIDLHNSLRRSVNPTASNMLKMEWYPEAAANAERWAYRCIESHSSRDSRVIGGIK 72 Query: 63 CGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKA 120 CGEN+ A+Y ++ W+ E K++ + S GH+T +VW + + G A Sbjct: 73 CGENIYMATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAA 132 Query: 121 --SASDGSSFVVARYFPAGNVV 140 +S S F V +Y PAGN++ Sbjct: 133 YCPSSKYSYFYVCQYCPAGNII 154 >1RC9-A nrPDB Length = 221 Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 19/147 (12%) Query: 8 QFHNEVLKAHNEYRQKHGVPPLKLCKNLNR-----EAQQYSEALASTRILKHSPESSRG- 61 + NE++ HN R+ V P N+ R EA +E A I HS SR Sbjct: 13 EIQNEIVDLHNSLRR--SVNPTA--SNMLRMEWYPEAADNAERWAYRCIESHSSYESRVI 68 Query: 62 ---QCGENLAWASYDQTGKEVADRWYSEIKNYNF---QQPGFTSGTGHFTAMVWKNTKKM 115 +CGEN+ + Y ++ W+ E K++ + P + TGH+T +VW + ++ Sbjct: 69 EGIKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPP-NAVTGHYTQIVWYKSYRI 127 Query: 116 GVGKA--SASDGSSFVVARYFPAGNVV 140 G A +S S F V +Y PAGN + Sbjct: 128 GCAAAYCPSSPYSYFFVCQYCPAGNFI 154 >5ZHO-A nrPDB Length = 162 Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 42 YSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKNYN 91 Y + L S R+LKH P++ W Y ++G + +Y+ I N N Sbjct: 26 YQKPLNSVRLLKHGPDTYNSNLAAFELW--YGKSGTTITSVYYNTINNQN 73 >5LSQ-A nrPDB Length = 359 Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 22 QKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVA 80 QK G+ +K +R+ Q EA+A+++ P + + C +L ++ Y +G+EV Sbjct: 40 QKDGIFQIKTDSEQDRKTQ---EAMAASKQFCKEPLTFKSSCVSDLTYSGYVASGEEVT 95 >5T2H-A nrPDB Length = 299 Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 96 GFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVN 141 GFT+G GHF N KK+ G A G F ++++ N++N Sbjct: 168 GFTAGEGHFGV----NLKKVK-GTAKVYVGLRFAISQHIRDKNLMN 208 >4NNZ-A nrPDB Length = 439 Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 79 VADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKAS 121 V+ WY +Y + PG T + M++K ++K+G G+AS Sbjct: 30 VSQLWYRIGSSY--ETPGLTGLSHALEHMMFKGSRKLGPGEAS 70 >5T2N-A nrPDB Length = 296 Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust. Identities = 10/15 (66%), Positives = 11/15 (73%) Query: 96 GFTSGTGHFTAMVWK 110 GFTSG GHF +WK Sbjct: 168 GFTSGEGHFGVNLWK 182 >4V6W-AT nrPDB Length = 156 Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust. Identities = 11/40 (27%), Positives = 23/40 (57%) Query: 21 RQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSR 60 R+++GV P C+ + A++ +AL R+++ P+ R Sbjct: 82 RKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGR 121 >4Z9D-A nrPDB Length = 175 Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust. Identities = 12/32 (37%), Positives = 15/32 (46%) Query: 120 ASASDGSSFVVARYFPAGNVVNEGFFEENVLP 151 + SDG ARY P VN G + V+P Sbjct: 143 SQVSDGPGTTNARYVPGSTFVNPGVIPQLVVP 174 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4AIW-A nrPDB 236 3e-63 1RC9-A nrPDB 195 7e-51 1WVR-A nrPDB 194 1e-50 1XX5-A nrPDB 189 5e-49 2EPF-A nrPDB 178 9e-46 1CFE-A nrPDB 169 6e-43 Sequences not found previously or not previously below threshold: 4BJO-A nrPDB 32 0.12 3MYU-A nrPDB 31 0.26 5B16-A nrPDB 30 0.44 4BS5-A nrPDB 29 0.89 5M25-A nrPDB 29 1.1 5FGU-A nrPDB 28 1.4 2H9P-A nrPDB 28 1.5 6IWR-A nrPDB 28 1.8 3IYO-A nrPDB 27 2.5 2ZZQ-A nrPDB 27 2.5 1GXS-A nrPDB 27 3.6 2ZTN-A nrPDB 27 3.9 4P9G-A nrPDB 27 4.2 5ZQJ-A nrPDB 26 4.9 6IFE-A nrPDB 26 5.1 CONVERGED! >4AIW-A nrPDB Length = 154 Score = 236 bits (602), Expect = 3e-63, Method: Composition-based stats. Identities = 154/154 (100%), Positives = 154/154 (100%) Query: 1 MGKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSR 60 MGKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSR Sbjct: 1 MGKSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSR 60 Query: 61 GQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120 GQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA Sbjct: 61 GQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKA 120 Query: 121 SASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK 154 SASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK Sbjct: 121 SASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK 154 >1RC9-A nrPDB Length = 221 Score = 195 bits (495), Expect = 7e-51, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 9/144 (6%) Query: 8 QFHNEVLKAHNEYRQKHGVPPLKLCK-NLNREAQQYSEALASTRILKHSPESSRG----Q 62 + NE++ HN R+ + + EA +E A I HS SR + Sbjct: 13 EIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIK 72 Query: 63 CGENLAWASYDQTGKEVADRWYSEIKNYNFQQP--GFTSGTGHFTAMVWKNTKKMGV--G 118 CGEN+ + Y ++ W+ E K++ + + TGH+T +VW + ++G Sbjct: 73 CGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAA 132 Query: 119 KASASDGSSFVVARYFPAGNVVNE 142 +S S F V +Y PAGN + + Sbjct: 133 YCPSSPYSYFFVCQYCPAGNFIGK 156 >1WVR-A nrPDB Length = 221 Score = 194 bits (493), Expect = 1e-50, Method: Composition-based stats. Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 9/154 (5%) Query: 8 QFHNEVLKAHNEYRQKHGVPPLKLCK-NLNREAQQYSEALASTRILKHSPESSRG----Q 62 + NE++ HN R+ + K EA +E A I HS SR + Sbjct: 13 EIQNEIIDLHNSLRRSVNPTASNMLKMEWYPEAAANAERWAYRCIESHSSRDSRVIGGIK 72 Query: 63 CGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTS--GTGHFTAMVWKNTKKMGV--G 118 CGEN+ A+Y ++ W+ E K++ + S GH+T +VW + + G Sbjct: 73 CGENIYMATYPAKWTDIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAA 132 Query: 119 KASASDGSSFVVARYFPAGNVVNEGFFEENVLPP 152 +S S F V +Y PAGN++ + PP Sbjct: 133 YCPSSKYSYFYVCQYCPAGNIIGKTATPYKSGPP 166 >1XX5-A nrPDB Length = 221 Score = 189 bits (479), Expect = 5e-49, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 9/155 (5%) Query: 7 KQFHNEVLKAHNEYRQKHGVPPLKLCK-NLNREAQQYSEALASTRILKHSPESSRG---- 61 K+ E++ HN R++ + K EA +E A+T L HSP++ R Sbjct: 12 KKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRVLEGI 71 Query: 62 QCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVG- 118 QCGE++ +S +T E+ W+ E KN+ + S TGH+T +VW T + G Sbjct: 72 QCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGANPPGSVTGHYTQIVWYQTYRAGCAV 131 Query: 119 -KASASDGSSFVVARYFPAGNVVNEGFFEENVLPP 152 +S S F V +Y P+GN + + PP Sbjct: 132 SYCPSSAWSYFYVCQYCPSGNFQGKTATPYKLGPP 166 >2EPF-A nrPDB Length = 210 Score = 178 bits (451), Expect = 9e-46, Method: Composition-based stats. Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 7/142 (4%) Query: 7 KQFHNEVLKAHNEYRQKHGVPPLKLCK-NLNREAQQYSEALASTRILKHSPESSRG---- 61 K + E++ HN R+ + + N A Q ++ A HSP ++R Sbjct: 3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKL 62 Query: 62 QCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVGK 119 +CGEN+ +S V WY EIKN+ + S GH+T +VW + +G Sbjct: 63 RCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCAS 122 Query: 120 ASASDGSSFVVARYFPAGNVVN 141 A S V +Y PAGN+ Sbjct: 123 AKCSSSKYLYVCQYCPAGNIRG 144 >1CFE-A nrPDB Length = 135 Score = 169 bits (427), Expect = 6e-43, Method: Composition-based stats. Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 8/138 (5%) Query: 7 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGEN 66 + + L HN+ R + GV P+ NL AQ Y+ + A L HS GEN Sbjct: 1 QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA------GEN 54 Query: 67 LAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASD 124 LA D TG+ W SE +YN+ G H+T +VW+N+ ++G G+A ++ Sbjct: 55 LAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNN 114 Query: 125 GSSFVVARYFPAGNVVNE 142 G F+ Y P GN + + Sbjct: 115 GWWFISCNYDPVGNWIGQ 132 >4BJO-A nrPDB Length = 338 Score = 31.7 bits (70), Expect = 0.12, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 21/48 (43%) Query: 88 KNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFP 135 ++Y Q + GHF MVW+ + V + S A+Y+P Sbjct: 96 RSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWP 143 >3MYU-A nrPDB Length = 344 Score = 30.9 bits (68), Expect = 0.26, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 17/79 (21%) Query: 67 LAWASYDQTGKEVADRWYSEIKNYNFQQPGFTS-------GTGHFTAMV----------W 109 L + + ++ +W ++ ++ S TG + + W Sbjct: 118 LFLSPPYKEWDDIKQKWTGNRYDFLYEPSKLVSFYRSMILITGSASEITAIKKAWNEKNW 177 Query: 110 KNTKKMGVGKASASDGSSF 128 K G+G + S F Sbjct: 178 NQFMKFGIGHGQTNSASRF 196 >5B16-A nrPDB Length = 986 Score = 30.2 bits (66), Expect = 0.44, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 16/37 (43%) Query: 86 EIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASA 122 +I Y Q S +T V+ +++G GK + Sbjct: 893 DIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPS 929 >4BS5-A nrPDB Length = 225 Score = 29.0 bits (63), Expect = 0.89, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 1/81 (1%) Query: 33 KNLNREAQQYSEALASTRI-LKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKNYN 91 K ++ + S+ A+T P E +A G + + + K+ Sbjct: 101 KAMDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGV 160 Query: 92 FQQPGFTSGTGHFTAMVWKNT 112 + P T H +V T Sbjct: 161 YDDPSCTGNVNHGVLVVGYGT 181 >5M25-A nrPDB Length = 434 Score = 28.6 bits (62), Expect = 1.1, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 13/33 (39%) Query: 117 VGKASASDGSSFVVARYFPAGNVVNEGFFEENV 149 K + + P N++ G F+E+V Sbjct: 221 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 253 >5FGU-A nrPDB Length = 567 Score = 28.2 bits (61), Expect = 1.4, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 2/50 (4%) Query: 9 FHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPES 58 +++ YR+K P + + A+ KHSP++ Sbjct: 289 ITKDMIDMSAGYREKWESKP--EPSGWYSYFFKNTNQRATESDYKHSPKN 336 >2H9P-A nrPDB Length = 329 Score = 28.2 bits (61), Expect = 1.5, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 13/33 (39%) Query: 117 VGKASASDGSSFVVARYFPAGNVVNEGFFEENV 149 K + + P N++ G F+E+V Sbjct: 116 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 148 >6IWR-A nrPDB Length = 597 Score = 27.9 bits (60), Expect = 1.8, Method: Composition-based stats. Identities = 6/32 (18%), Positives = 12/32 (37%), Gaps = 2/32 (6%) Query: 67 LAWASYD--QTGKEVADRWYSEIKNYNFQQPG 96 + S + V + W+ E K+Y + Sbjct: 394 IYVGSSPTLKNYVRVVEVWWDEYKDYFYASRP 425 >3IYO-A nrPDB Length = 660 Score = 27.5 bits (59), Expect = 2.5, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 9/116 (7%) Query: 35 LNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKNYNFQ- 93 + EA Y++ + +++ P G ++ + + QT + I + + + Sbjct: 175 MATEASNYAQYRVARATIRYRPLVPNAVGGYAISISFWPQTTTTPTSVDMNSITSTDVRI 234 Query: 94 --QPG------FTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVN 141 QPG S H+ W++ + GV + A+ G + P + N Sbjct: 235 LVQPGIASELVIPSERLHYRNQGWRSVETSGVAEEEATSGLVMLCIHGSPVNSYTN 290 >2ZZQ-A nrPDB Length = 552 Score = 27.5 bits (59), Expect = 2.5, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 9/116 (7%) Query: 35 LNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKNYNFQ- 93 + EA Y++ + +++ P G ++ + + QT + I + + + Sbjct: 119 MATEASNYAQYRVARATIRYRPLVPNAVGGYAISISFWPQTTTTPTSVDMNSITSTDVRI 178 Query: 94 --QPG------FTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVN 141 QPG S H+ W++ + GV + A+ G + P + N Sbjct: 179 LVQPGIASELVIPSERLHYRNQGWRSVETSGVAEEEATSGLVMLCIHGSPVNSYTN 234 >1GXS-A nrPDB Length = 270 Score = 27.1 bits (58), Expect = 3.6, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Query: 52 LKHSPESSRGQCGEN-LAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHF----TA 106 +S SS G++ +A +Y +W+ +YN+++ +GHF + Sbjct: 113 FSYSNTSSDLSMGDDKMAQDTYTF-----LVKWFERFPHYNYREFYIAGESGHFIPQLSQ 167 Query: 107 MVWKN 111 +V++N Sbjct: 168 VVYRN 172 >2ZTN-A nrPDB Length = 478 Score = 26.7 bits (57), Expect = 3.9, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 9/116 (7%) Query: 35 LNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKNYNFQ- 93 + EA Y++ +++ P G ++ + + QT + I + + + Sbjct: 47 MATEASNYAQYRVVRATIRYRPLVPNAVGGYAISISFWPQTTTTPTSVDMNSITSTDVRI 106 Query: 94 --QPG------FTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVN 141 QPG S H+ W++ + GV + A+ G + P + N Sbjct: 107 LVQPGIASELVIPSERLHYRNQGWRSVETTGVAEEEATSGLVMLCIHGSPVNSYTN 162 >4P9G-A nrPDB Length = 197 Score = 26.7 bits (57), Expect = 4.2, Method: Composition-based stats. Identities = 4/53 (7%), Positives = 16/53 (30%) Query: 44 EALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSEIKNYNFQQPG 96 + + + +R + + + W + ++ ++ PG Sbjct: 80 NRWCDILLAREAGLVNRHYHPHEVFAYTISGKWGYLEHDWTATRGDFVYETPG 132 >5ZQJ-A nrPDB Length = 541 Score = 26.3 bits (56), Expect = 4.9, Method: Composition-based stats. Identities = 6/32 (18%), Positives = 13/32 (40%) Query: 55 SPESSRGQCGENLAWASYDQTGKEVADRWYSE 86 +P+ S + GE+ A ++S+ Sbjct: 12 NPDPSICRAGEDYYMAVSTFEWFPGVQIYHSK 43 >6IFE-A nrPDB Length = 553 Score = 26.3 bits (56), Expect = 5.1, Method: Composition-based stats. Identities = 6/32 (18%), Positives = 13/32 (40%) Query: 55 SPESSRGQCGENLAWASYDQTGKEVADRWYSE 86 +P+ S + GE+ A ++S+ Sbjct: 30 NPDPSICRVGEDYYMAVSTFEWFPGVQIYHSK 61 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.303 0.122 0.350 Lambda K H 0.267 0.0376 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,707,902 Number of Sequences: 36641 Number of extensions: 196186 Number of successful extensions: 409 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 355 Number of HSP's gapped (non-prelim): 40 length of query: 154 length of database: 10,336,785 effective HSP length: 89 effective length of query: 65 effective length of database: 7,075,736 effective search space: 459922840 effective search space used: 459922840 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 54 (25.5 bits)