BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9H211 (546 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2WVR-C nrPDB 1086 0.0 6M9T-A nrPDB 34 0.17 >2WVR-C nrPDB Length = 546 Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/546 (99%), Positives = 545/546 (99%) Query: 1 MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRD 60 MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRD Sbjct: 1 MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRD 60 Query: 61 QARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTI 120 QARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTI Sbjct: 61 QARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTI 120 Query: 121 SELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPG 180 SELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPG Sbjct: 121 SELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPG 180 Query: 181 LPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIK 240 LPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEE NVGQIK Sbjct: 181 LPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIK 240 Query: 241 TVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQ 300 TVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQ Sbjct: 241 TVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQ 300 Query: 301 KLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTA 360 KLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTA Sbjct: 301 KLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTA 360 Query: 361 QEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ 420 QEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ Sbjct: 361 QEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ 420 Query: 421 DLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACA 480 DLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACA Sbjct: 421 DLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACA 480 Query: 481 RMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQT 540 RMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQT Sbjct: 481 RMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQT 540 Query: 541 RAEEGL 546 RAEEGL Sbjct: 541 RAEEGL 546 >6M9T-A nrPDB Length = 537 Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 14/179 (7%) Query: 141 KASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPGLPGLVLPYKYQVLAEMFRSM 200 K+ + +A +S +A GR K A + F+ + G++ K L ++ S+ Sbjct: 307 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDATVRGILRNAK---LKPVYDSL 363 Query: 201 DTI-----VGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIKTVYPASYRFRQERSV 255 D + + M+ ET A ++ + ++R++E V K+ + R +R + Sbjct: 364 DAVRRAALINMVFQMGETGV-AGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVI 422 Query: 256 PTFKDGTRR---SDYQLTIEPLLEQEADGAAPQLTASRLL--QRRQIFSQKLVEHVKEH 309 TF+ GT S ++T E ++ A + S LL + IF+Q VEH K H Sbjct: 423 TTFRTGTWDAYGSWGRITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNQTSVEHCKTH 481 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2WVR-C nrPDB 943 0.0 Sequences not found previously or not previously below threshold: 3IYO-A nrPDB 35 0.060 6M9T-A nrPDB 35 0.11 6EDT-F nrPDB 34 0.13 5AOO-B nrPDB 34 0.16 3TTT-A nrPDB 33 0.32 5GKA-B nrPDB 33 0.39 4N78-F nrPDB 32 0.69 4XBR-A nrPDB 32 0.70 5VM1-A nrPDB 32 0.86 2Q0N-A nrPDB 32 0.91 3G88-A nrPDB 31 1.3 4JDH-A nrPDB 31 1.4 5MH6-A nrPDB 31 1.5 4N78-D nrPDB 30 2.4 4FIE-A nrPDB 30 2.6 6FWS-A nrPDB 30 3.4 4IKM-A nrPDB 30 3.9 6AZ1-Y nrPDB 29 4.6 4FW9-A nrPDB 28 7.7 CONVERGED! >2WVR-C nrPDB Length = 546 Score = 943 bits (2438), Expect = 0.0, Method: Composition-based stats. Identities = 545/546 (99%), Positives = 545/546 (99%) Query: 1 MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRD 60 MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRD Sbjct: 1 MEQRRVTDFFARRRPGPPRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRD 60 Query: 61 QARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTI 120 QARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTI Sbjct: 61 QARPPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTI 120 Query: 121 SELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPG 180 SELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPG Sbjct: 121 SELASCLQRARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPG 180 Query: 181 LPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIK 240 LPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEE NVGQIK Sbjct: 181 LPGLVLPYKYQVLAEMFRSMDTIVGMLHNRSETPTFAKVQRGVQDMMRRRFEERNVGQIK 240 Query: 241 TVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQ 300 TVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQ Sbjct: 241 TVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEADGAAPQLTASRLLQRRQIFSQ 300 Query: 301 KLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTA 360 KLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTA Sbjct: 301 KLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVDEVPDIEPAALPQPPATEKLTTA 360 Query: 361 QEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ 420 QEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ Sbjct: 361 QEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ 420 Query: 421 DLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACA 480 DLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACA Sbjct: 421 DLLERIRAKEAQKQLAQMTRCPEQEQRLQRLERLPELARVLRSVFVSERKPALSMEVACA 480 Query: 481 RMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQT 540 RMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQT Sbjct: 481 RMVGSCCTIMSPGEMEKHLLLLSELLPDWLSLHRIRTDTYVKLDKAADLAHITARLAHQT 540 Query: 541 RAEEGL 546 RAEEGL Sbjct: 541 RAEEGL 546 >3IYO-A nrPDB Length = 660 Score = 35.4 bits (80), Expect = 0.060, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%) Query: 31 SPARPALRAPASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDEVSSPSTPEAP--DI 88 +P P + A A A R+ ARP + RDQA+ PA R ++P T AP D Sbjct: 60 NPFAPDVTAAAGAGPRVRQPARPLGSAWRDQAQRPAVASRRRPTTAGAAPLTAVAPAHDT 119 Query: 89 PACP 92 P P Sbjct: 120 PPVP 123 >6M9T-A nrPDB Length = 537 Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 14/179 (7%) Query: 141 KASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPGLPGLVLPYKYQVLAEMFRSM 200 K+ + +A +S +A GR K A + F+ + G++ K L ++ S+ Sbjct: 307 KSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDATVRGILRNAK---LKPVYDSL 363 Query: 201 DTI-----VGMLHNRSETPTFAKVQRGVQDMMRRRFEECNVGQIKTVYPASYRFRQERSV 255 D + + M+ ET A ++ + ++R++E V K+ + R +R + Sbjct: 364 DAVRRAALINMVFQMGETGV-AGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVI 422 Query: 256 PTFKDGT---RRSDYQLTIEPLLEQEADGAAPQLTASRLL--QRRQIFSQKLVEHVKEH 309 TF+ GT S ++T E ++ A + S LL + IF+Q VEH K H Sbjct: 423 TTFRTGTWDAYGSWGRITTETAIQLMAIMCVLSVCWSPLLIMMLKMIFNQTSVEHCKTH 481 >6EDT-F nrPDB Length = 531 Score = 34.3 bits (77), Expect = 0.13, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Query: 18 PRIAPPKLACRTPSPA-RPALRAPASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDE 76 P +A K + T P R A ++PA++ SG++ A+ AA PPA+R + + Sbjct: 2 PHMAATKASTATDEPVKRTATKSPAASASGAKTGAKRTAAKSA-SGSPPAKRATKPAARS 60 Query: 77 VSSPSTPEAPDIPACP 92 V S P+ P Sbjct: 61 VKPASAPQDTTTSTIP 76 >5AOO-B nrPDB Length = 370 Score = 34.3 bits (77), Expect = 0.16, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%) Query: 350 QPPATEKLTTAQEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPA 409 +P A +A + + KA+++ R AAPSS +P+P+L A P+ + Sbjct: 74 EPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPAAPSSTANPQPSLIALNPSATQS 133 Query: 410 ASPSALKG 417 + S L G Sbjct: 134 GNASILTG 141 >3TTT-A nrPDB Length = 753 Score = 33.1 bits (74), Expect = 0.32, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 14/112 (12%) Query: 372 SPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASPSALKGVSQ-----DLLERI 426 SP + + ++ + S AP GS RPA TPP P A P +LK + LE + Sbjct: 14 SPLHDSSEAKPGMDSLAPED-GSHRPAAEPTPPGAQPTA-PGSLKAPDTRNEKLNSLEDV 71 Query: 427 RAKEAQKQLA--QMTRCPEQEQRLQRLERLPELAR--VLR---SVFVSERKP 471 R L Q R + + L+ R P L +LR + F ER P Sbjct: 72 RKGSENYALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIP 123 >5GKA-B nrPDB Length = 367 Score = 32.7 bits (73), Expect = 0.39, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%) Query: 350 QPPATEKLTTAQEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPA 409 +P A +A + + KA+++ R AAPSS +P+P+L A P+ + Sbjct: 71 EPAAARASESATDSAIEGIDAAGKAASKAITRKLDRPAAPSSTANPQPSLIALNPSATQS 130 Query: 410 ASPSALKG 417 + S L G Sbjct: 131 GNASILTG 138 >4N78-F nrPDB Length = 514 Score = 32.0 bits (71), Expect = 0.69, Method: Composition-based stats. Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 3/92 (3%) Query: 18 PRIAPPKLACRTPSPARPALRAPASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDEV 77 P +PP + P+PA A P ATS S PA A A + D Sbjct: 275 PTPSPPSV---FPAPAGSAGTPPLPATSASAPAPLVPATVPSSTAPDAAAGGAQTLADGF 331 Query: 78 SSPSTPEAPDIPACPSPGQKIKKSTPAAGQPP 109 +SP+ P P P Q + PA+ P Sbjct: 332 TSPTPPVVSSTPPTGHPVQFYSMNRPASRHTP 363 >4XBR-A nrPDB Length = 366 Score = 32.0 bits (71), Expect = 0.70, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 331 WHPRFNVDEVPDIEPAALPQPPATEKLTTAQEVLARARNL--ISPRMEKALSQLALRSAA 388 W V E+ D EP +PP + R +NL +SP ++ L +L +R A Sbjct: 274 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 333 Query: 389 PSSPGSPRPALPATPPATPPAA 410 + + P A PPA+ Sbjct: 334 QRATAAELLKHPFLAKAGPPAS 355 >5VM1-A nrPDB Length = 491 Score = 31.6 bits (70), Expect = 0.86, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%) Query: 134 GARVRALKASAQDAGESCTPEAEGRPEEPCGEKA------PAYQRFHALAQPGLPGL 184 AR+ + A+ D CTP R EP E+A AYQR+HAL P L L Sbjct: 437 AARLGLIAATGADPFTICTPPQTARTIEP--EQALLSAYDEAYQRYHAL-YPALHAL 490 >2Q0N-A nrPDB Length = 301 Score = 31.6 bits (70), Expect = 0.91, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 331 WHPRFNVDEVPDIEPAALPQPPATEKLTTAQEVLARARNL--ISPRMEKALSQLALRSAA 388 W V E+ D EP +PP + R +NL +SP ++ L +L +R A Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 268 Query: 389 PSSPGSPRPALPATPPATPPAA 410 + + P A PPA+ Sbjct: 269 QRATAAELLKHPFLAKAGPPAS 290 >3G88-A nrPDB Length = 249 Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 341 PDIEPAALPQPPATEKL-TTAQEVLARARNLISPRMEKALSQLALRSAAPSSPGSP-RPA 398 P +E P PPA E+L EVLA L P +A + L AP+ P P RP Sbjct: 186 PRVEEELAPLPPALERLGGRLGEVLA----LQLPLSGEARHLVVLEKTAPTPPAYPRRPG 241 Query: 399 LPATPP 404 +P P Sbjct: 242 VPERHP 247 >4JDH-A nrPDB Length = 346 Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 331 WHPRFNVDEVPDIEPAALPQPPATEKLTTAQEVLARARNL--ISPRMEKALSQLALRSAA 388 W V E+ D EP +PP + R +NL +SP ++ L +L +R A Sbjct: 254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 313 Query: 389 PSSPGSPRPALPATPPATPPAA 410 + + P A PPA+ Sbjct: 314 QRATAAELLKHPFLAKAGPPAS 335 >5MH6-A nrPDB Length = 308 Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 2/135 (1%) Query: 70 LRLSVDEVSSPSTPEAPD-IPACPSPGQKIKKSTPAAGQPPHLTSAQDQDTISELASCLQ 128 +R S D V + ST PD + + + + +TP + + +A + +T+ E AS + Sbjct: 164 VRRSGDPVDNVSTVYTPDRLHEAIADARFVVLATPLTDETEGMVAAPEFETMREDASLVN 223 Query: 129 RARELGARVRALKASAQDAGESCTPEAEGRPEEPCGEKAPAYQRFHALAQPGLPGLVLPY 188 AR V + +A D+G+ + EEP E +P + L P + Y Sbjct: 224 VARG-PVVVESDLVAALDSGDIAGAALDVFSEEPLPEDSPLWDFEDVLITPHVSAATSKY 282 Query: 189 KYQVLAEMFRSMDTI 203 V A + +++ I Sbjct: 283 HEDVAALIRENIEKI 297 >4N78-D nrPDB Length = 559 Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 383 ALRSAAPSSPGSPRPALPATPP-----ATPPAASPSALKGVSQDLLERIRAKEAQKQLAQ 437 L ++PG P +P +PP A+ P PS L +S + A QL + Sbjct: 454 GLHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRK 513 Query: 438 MTRCPEQEQRLQRLE 452 + EQE + +R+E Sbjct: 514 VEEQREQEAKHERIE 528 >4FIE-A nrPDB Length = 423 Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%) Query: 331 WHPRFNVDEVPDIEPAALPQPPATEKLTTAQEVLARARNL--ISPRMEKALSQLALRSAA 388 W V E+ D EP +PP + R +NL +SP ++ L +L +R A Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 390 Query: 389 PSSPGSPRPALPATPPATPPAA 410 + + P A PPA+ Sbjct: 391 QRATAAELLKHPFLAKAGPPAS 412 >6FWS-A nrPDB Length = 716 Score = 29.7 bits (65), Expect = 3.4, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 14/79 (17%) Query: 403 PPATPPAASPSALKGVSQDLLERIRA------------KEAQKQLAQMTRCPEQEQRL-Q 449 P PP A P L ++L E I + +EA+ + A M P++ + Q Sbjct: 292 PKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFA-MGELPDEVLEICQ 350 Query: 450 RLERLPELARVLRSVFVSE 468 RL +L E+ R L +F+++ Sbjct: 351 RLAKLTEMLRGLAELFLND 369 >4IKM-A nrPDB Length = 469 Score = 29.7 bits (65), Expect = 3.9, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Query: 415 LKGVSQDLLERIRAKEAQKQLAQM--TRCPEQEQRLQRLERLPELARVLRSVFVSERKPA 472 LKGV DL + E +K+L + TR + E L +E+ +LA + +SER P Sbjct: 389 LKGVLDDLQDNEVLTENEKELVEQEKTRQSKNEALLSMVEKKGDLALDVLFRSISERDPY 448 Query: 473 L 473 L Sbjct: 449 L 449 >6AZ1-Y nrPDB Length = 159 Score = 29.3 bits (64), Expect = 4.6, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%) Query: 33 ARPALRAPASATSGSRKRARPPAAPGRDQARPPARRRLRLSVDEVSSPS 81 ARP A A +K ARPPA G ARPPA++ R + ++P+ Sbjct: 111 ARPP--AQKGARPSGQKGARPPAQKG---ARPPAQKGARPPAQKGAAPA 154 >4FW9-A nrPDB Length = 732 Score = 28.5 bits (62), Expect = 7.7, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 16/109 (14%) Query: 64 PPARRRLRLSVDEVSSPSTPEAPDIPACPSPGQKIKKSTPAAGQPPHLTSAQDQ------ 117 PP+ + + +S+ S PD+ P +K+ T +GQ HL A + Sbjct: 54 PPSLGKHEALLAYLSTQSVETPPDLLYVPLSERKVAVMTLPSGQEIHLAEAVEGLLLEVN 113 Query: 118 --DTISELASCLQRARELGARVR--------ALKASAQDAGESCTPEAE 156 D + S L+ +L AR + AL+ AQ+AG + + E Sbjct: 114 RLDELFRQGSFLREKTQLEARFKEAREQQLEALRREAQEAGFALSTNGE 162 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.303 0.133 0.414 Lambda K H 0.267 0.0397 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,076,157 Number of Sequences: 36641 Number of extensions: 834838 Number of successful extensions: 3130 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 66 Number of HSP's that attempted gapping in prelim test: 2767 Number of HSP's gapped (non-prelim): 334 length of query: 546 length of database: 10,336,785 effective HSP length: 102 effective length of query: 444 effective length of database: 6,599,403 effective search space: 2930134932 effective search space used: 2930134932 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 61 (28.2 bits)