BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9H008 (270 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2X4D-A nrPDB 544 e-155 3HLT-A nrPDB 201 3e-52 2HO4-A nrPDB 188 2e-48 2P27-A nrPDB 83 1e-16 1PW5-A nrPDB 81 6e-16 4BX2-A nrPDB 80 1e-15 4BKM-A nrPDB 78 3e-15 2C4N-A nrPDB 63 1e-10 3PDW-A nrPDB 62 2e-10 4I9G-A nrPDB 56 2e-08 4KNV-A nrPDB 34 0.051 2GFH-A nrPDB 34 0.061 3KC2-A nrPDB 33 0.13 3QUB-A nrPDB 32 0.40 2HI0-A nrPDB 31 0.46 3U9T-A nrPDB 29 1.6 3V7I-A nrPDB 29 1.7 1KSU-A nrPDB 29 1.7 3MEM-A nrPDB 29 2.0 4G9B-A nrPDB 28 3.2 4PNH-A nrPDB 28 5.2 3NA6-A nrPDB 28 5.2 5B42-A nrPDB 28 5.8 >2X4D-A nrPDB Length = 271 Score = 544 bits (1401), Expect = e-155, Method: Compositional matrix adjust. Identities = 265/270 (98%), Positives = 266/270 (98%) Query: 1 MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKS 60 MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNES S Sbjct: 2 MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAAS 61 Query: 61 RAELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNC 120 RAELVGQLQRLGFDISEQEVTAPAPAACQILKE+GLRPYLLIHDGVRSEFDQIDTSNPNC Sbjct: 62 RAELVGQLQRLGFDISEQEVTAPAPAACQILKERGLRPYLLIHDGVRSEFDQIDTSNPNC 121 Query: 121 VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYAC 180 VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYY TSGLMLDVGPYMKALEYAC Sbjct: 122 VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYAC 181 Query: 181 GIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRP 240 GIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRP Sbjct: 182 GIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRP 241 Query: 241 SDEHHPEVKADGYVDNLAEAVDLLLQHADK 270 SDEHHPEVKADGYVDNLAEAVDLLLQHADK Sbjct: 242 SDEHHPEVKADGYVDNLAEAVDLLLQHADK 271 >3HLT-A nrPDB Length = 266 Score = 201 bits (510), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 112/258 (43%), Positives = 158/258 (61%), Gaps = 6/258 (2%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQ 69 ++ VL+D+SG L+ A A+ G+ EA+ RL+ + + +RF TN +++S+ +L+ +L+ Sbjct: 6 ALKAVLVDLSGTLHIEDA----AVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLR 61 Query: 70 RLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGES 129 +L FDISE E+ AA +L+ + +RP LL+ D +F I TS+PN VV+ A E Sbjct: 62 KLEFDISEDEIFTSLTAARSLLERKQVRPMLLVDDRALPDFKGIQTSDPNAVVMGLAPEH 121 Query: 130 FSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGK 189 F YQ +N AF++L L+ LI++ K RYYK GL L GP++ ALEYA KA VVGK Sbjct: 122 FHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKATVVGK 179 Query: 190 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVK 249 P FF AL+ G E +AVMIGDD DVGGAQ GM + V+TGK+R SDE Sbjct: 180 PEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKYRASDEEKINPP 239 Query: 250 ADGYVDNLAEAVDLLLQH 267 ++ AVD +LQH Sbjct: 240 PYLTCESFPHAVDHILQH 257 >2HO4-A nrPDB Length = 259 Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/258 (40%), Positives = 155/258 (60%), Gaps = 6/258 (2%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQ 69 ++ VL+D++G L+ A A+ G+ EA+ RL+ + + VRF TN +++++ +L+ +L+ Sbjct: 6 ALKAVLVDLNGTLHIEDA----AVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLK 61 Query: 70 RLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGES 129 +L F+ISE E+ AA +++++ +RP LL+ D EF + T +PN VVI A E Sbjct: 62 KLEFEISEDEIFTSLTAARNLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEH 121 Query: 130 FSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGK 189 F YQ +N AF++L L+ LI++ K RYYK GL L GP++ ALEYA KA VVGK Sbjct: 122 FHYQLLNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGK 179 Query: 190 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVK 249 P FF AL+ +AVMIGDD DV GAQ GM + V+TGK++ +DE Sbjct: 180 PEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPP 239 Query: 250 ADGYVDNLAEAVDLLLQH 267 ++ AVD +LQH Sbjct: 240 PYLTCESFPHAVDHILQH 257 >2P27-A nrPDB Length = 306 Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 26/253 (10%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +GVL D GVL++ G A+ G+ E + RL R+ F +N S+++R EL + Sbjct: 18 LGRAQGVLFDCDGVLWN----GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALR 73 Query: 68 LQRLGFD-ISEQEVTAPAPAACQILKEQGLRP-------YLLIHDGVRSEFDQI------ 113 RLGF + +++ + A A ++L+++ P ++L +G+R+E Sbjct: 74 FARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAG 133 Query: 114 -----DTSNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLML 167 D + P V+ E FS+ + A L + E +L++ + ++ + G Sbjct: 134 DPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT 192 Query: 168 D-VGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRC 226 G A+E A G +A VVGKPSP F+ + ++ + +M+GD + D+ RC Sbjct: 193 PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRC 252 Query: 227 GMRALQVRTGKFR 239 GM + TG R Sbjct: 253 GMTTVLTLTGVSR 265 >1PW5-A nrPDB Length = 253 Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 32/268 (11%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L + +LD+ G Y + + GS+E + LK + F TN S + V + Sbjct: 2 LDKIELFILDMDGTFYLDDS----LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRK 57 Query: 68 LQRLGFDISEQEV-TAPAPAACQILKEQG-LRPYLLIHDGVRSEFDQ----IDTSNPNCV 121 L+ +G D+ + V T+ A +LK G R +LL ++ F+ ID NP+ V Sbjct: 58 LRNMGVDVPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFV 117 Query: 122 VIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKET---------SGLMLDVGPY 172 V+ ++ +Y+ + A I L KG++Y T G + D G Sbjct: 118 VLG-FDKTLTYERLKKA-----------CILLRKGKFYIATHPDINCPSKEGPVPDAGSI 165 Query: 173 MKALEYACGIKAEVV-GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRAL 231 M A+E + G K +++ GKP+P + GV + M+GD + DV + G+ ++ Sbjct: 166 MAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSI 225 Query: 232 QVRTGKFRPSDEHHPEVKADGYVDNLAE 259 V TG+ P D E K D NL E Sbjct: 226 LVLTGETTPEDLERAETKPDFVFKNLGE 253 >4BX2-A nrPDB Length = 293 Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/246 (26%), Positives = 117/246 (47%), Gaps = 22/246 (8%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +GVL D GVL++ G + G+ E + RL R+ F +N S+++R EL + Sbjct: 17 LGQAQGVLFDCDGVLWN----GERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALR 72 Query: 68 LQRLGF-DISEQEVTAPAPAACQILKEQGLRP-------YLLIHDGVRSEFDQIDT---- 115 RLGF + +++ + A A ++L+++ P ++L +G+R+E Sbjct: 73 FARLGFAGLRAEQLFSSALCAARLLRQRLPGPPDASGAVFVLGGEGLRAELRAAGLRLAG 132 Query: 116 ---SNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLD-VG 170 +P V+ E FS+ + A L + + +L++ + ++ + G G Sbjct: 133 DPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDC-LLVATDRDPWHPLSDGSRTPGTG 191 Query: 171 PYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA 230 A+E A G +A VVGKPSP F+ + V+ + +M+GD + D+ RCGM Sbjct: 192 SLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTT 251 Query: 231 LQVRTG 236 + TG Sbjct: 252 VLTLTG 257 >4BKM-A nrPDB Length = 309 Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 33/258 (12%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +GVL D GVL++ G + G+ E + RL R+ F +N S+++R EL + Sbjct: 20 LGQAQGVLFDCDGVLWN----GERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALR 75 Query: 68 LQRLGF-DISEQEVTAPAPAACQILKEQ-----GLRPYLLIHDGVRSEFDQIDTSN---- 117 RLGF + +++ + A A ++L+++ + Y+L + +E + + ++ Sbjct: 76 FARLGFAGLRAEQLFSSALCAARLLRQRLAGVPDPKAYVLGSPALAAELEAVGVTSVGVG 135 Query: 118 PNCV-------------------VIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRY 158 P+ + V+ FSY + A + L + + ++ + R Sbjct: 136 PDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQPDCLLVGTNMDNRL 195 Query: 159 YKETSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVG 218 E + G ++A+E A +A+++GKPSP F+ + V+ + +M+GD + Sbjct: 196 PLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSPYMFQCITEDFSVDPARTLMVGDRLET 255 Query: 219 DVGGAQRCGMRALQVRTG 236 D+ RCGM + TG Sbjct: 256 DILFGHRCGMTTVLTLTG 273 >2C4N-A nrPDB Length = 250 Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 58/250 (23%), Positives = 106/250 (42%), Gaps = 33/250 (13%) Query: 11 VRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQR 70 ++ V+ DI GVL A+ G+ E + + L + TN ++ +L + Sbjct: 3 IKNVICDIDGVLMHDN----VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFAT 58 Query: 71 LGFDISEQEVTAPAPAACQILKEQ-GLRPYL-----LIHDGVRSEFDQIDTSNPNCVVIA 124 G D+ + A A L+ Q G + Y+ LIH+ ++ F D NP+ V++ Sbjct: 59 AGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDV-NPDFVIVG 117 Query: 125 DAGESFSYQNMNNAFQVLMELEKPVLI---SLGKGRYYKETSGLMLDVGPYMKALEYACG 181 + S+++ M+ A + + + + G+G Y G +E G Sbjct: 118 ET-RSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPA--------CGALCAGIEKISG 168 Query: 182 IKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG----- 236 K VGKPSP ++AL + + + V++GD++ D+ + G+ + V +G Sbjct: 169 RKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLD 228 Query: 237 -----KFRPS 241 FRPS Sbjct: 229 DIDSMPFRPS 238 >3PDW-A nrPDB Length = 266 Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 13/260 (5%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +G L+D+ G +Y+ G I + E V LK + F TN S ++ ++ + Sbjct: 3 LKTYKGYLIDLDGTMYN----GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADK 58 Query: 68 LQRLGFDISEQEVTAPAPAACQILKEQ--GLRPYLLIHDGVRSEFDQ----IDTSNPNCV 121 L +E++V + A Q + +Q Y++ +G+R ++ N + V Sbjct: 59 LVSFDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQAIEENGLTFGGENADFV 118 Query: 122 VIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACG 181 V+ S +Y+ A L IS GL+ G L + G Sbjct: 119 VVG-IDRSITYEKF--AVGCLAIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTG 175 Query: 182 IKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPS 241 ++ +GKP + A++ +G + + +M+GD+ D+ GM L V TG + Sbjct: 176 VQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKRE 235 Query: 242 DEHHPEVKADGYVDNLAEAV 261 K +D+L E + Sbjct: 236 HMTDDMEKPTHAIDSLTEWI 255 >4I9G-A nrPDB Length = 361 Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 22/233 (9%) Query: 14 VLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGF 73 +L+D+ G ++ G G+V+++++++ +L F TN + +S E+ L LGF Sbjct: 19 LLIDLDGTVF----CGRQPTGGAVQSLSQVRSRKL---FVTNNASRSADEVAAHLCELGF 71 Query: 74 DISEQEVTAPAPAACQILKEQ---GLRPYLLIHDGVRSEFDQIDT-------SNPNCVVI 123 + ++V A +A +L Q G R ++ + + +E + P+ VV Sbjct: 72 TATGEDVVTSAQSAAHLLAGQLAPGARVLIVGTEALANEVAAVGLRPVRRFEDRPDAVV- 130 Query: 124 ADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIK 183 G S + + A L + ++ GL+ G + AL A G+ Sbjct: 131 --QGLSMTTGWSDLAEAALAIRAGALWVAANVDPTLPTERGLLPGNGSMVAALRTATGMD 188 Query: 184 AEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG 236 V GKP+P A+ A A+++GD + D+ GA G+ +L V TG Sbjct: 189 PRVAGKPAPALMTEAVARGDFRA--ALVVGDRLDTDIEGANAAGLPSLMVLTG 239 >4KNV-A nrPDB Length = 241 Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 22/42 (52%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA 230 KP+P F +GV+ VM+GD + D+ G G++A Sbjct: 159 KPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLKA 200 >2GFH-A nrPDB Length = 260 Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 22/42 (52%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA 230 KP+P F +GV+ VM+GD + D+ G G++A Sbjct: 176 KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKA 217 >3KC2-A nrPDB Length = 352 Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 207 HQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 266 H M+GD+ D+ GAQ G + V+TG + D+ E K V+++ +AV L+ Sbjct: 291 HAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLK-ECKPTLIVNDVFDAVTKTLE 349 >3QUB-A nrPDB Length = 243 Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Query: 188 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG 236 GKP+PE + AL+ G++A +AV+I + +G V + G+ + V TG Sbjct: 165 GKPNPEPYLMALKKGGLKADEAVVIENAPLG-VEAGHKAGIFTIAVNTG 212 >2HI0-A nrPDB Length = 240 Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust. Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 175 ALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVR 234 + ++A G K+ + KP+P+ ++ +GV + V IGD + D+ A+ M + V Sbjct: 151 SFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEI-DIQTARNSEMDEIAVN 209 Query: 235 TGKFR 239 G FR Sbjct: 210 WG-FR 213 >3U9T-A nrPDB Length = 655 Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 20/40 (50%) Query: 231 LQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQHADK 270 LQ G R D H P + DG+ LA DL+L+ D+ Sbjct: 475 LQSEPGHRRDDDPHSPWSRNDGWRSALARESDLMLRCRDE 514 >3V7I-A nrPDB Length = 413 Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust. Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 22/124 (17%) Query: 2 APWGKRLAGV--------RGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFC 53 APW R+ G+ RG +L + + GGG + + EA+ VR Sbjct: 57 APWAPRIDGIAASTGIESRGWMLPLEAAV---APGGGGDLGAAREAL---------VRDG 104 Query: 54 TNESQKSRAELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQI 113 E +RA + L+ + + QE TAPA A Q E+ R L I ++ D + Sbjct: 105 FTEQDANRA--IAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCL 162 Query: 114 DTSN 117 TSN Sbjct: 163 ITSN 166 >1KSU-A nrPDB Length = 571 Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 18/37 (48%) Query: 78 QEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQID 114 E+T A+ IL + G YL+ D VR +ID Sbjct: 397 NEITTRDKASAAILAQTGKSAYLIFDDSVRKSLSKID 433 >3MEM-A nrPDB Length = 457 Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 13/93 (13%) Query: 169 VGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGM 228 +G + +E + A+VV S F+ +A + V + ++G D+V ++ G Sbjct: 205 MGDLVDVVESDPSLAAQVVSWASSSFYAAAGRVHSVHDAVSRVLGFDLVMNLAMGLALG- 263 Query: 229 RALQVRTGKFRPSDEHHPEVKADGYVDNLAEAV 261 RAL+ HP+ DGYVD +A+ Sbjct: 264 RALK------------HPQDHPDGYVDYWQQAI 284 >4G9B-A nrPDB Length = 243 Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTG-----KFRPSDE 243 KP PE F +A +GV + I D G + GMR++ + G PS E Sbjct: 149 KPDPEIFLAACAGLGVPPQACIGIEDAQAG-IDAINASGMRSVGIGAGLTGAQLLLPSTE 207 Query: 244 HHPEVKADGYVDNLAE 259 + + N+AE Sbjct: 208 SLTWPRLSAFWQNVAE 223 >4PNH-A nrPDB Length = 199 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Query: 14 VLLDISGVL-YDSGA-----GGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSR 61 V+LD GV+ DS A A+ GS+EA+ARL + +V TN+S R Sbjct: 22 VVLDRDGVINVDSDAFVKSPDEWVALPGSLEAIARLNHAGYRVVVATNQSGIGR 75 >3NA6-A nrPDB Length = 331 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 86 AACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMEL 145 A + ++GLR +LIH G+ QID P+ + G+ + + + F+++++L Sbjct: 219 ARSNAIAKKGLR-NVLIHFGILQGEMQID---PSVTLDMPDGDCYLFSEHDGLFEIMIDL 274 Query: 146 EKPV 149 +PV Sbjct: 275 GEPV 278 >5B42-A nrPDB Length = 102 Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust. Identities = 13/54 (24%), Positives = 24/54 (44%) Query: 107 RSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYK 160 R ++++ N C + AG+ S + + + LE P + G+ YYK Sbjct: 35 RINYEKLKDENLACRISVKAGQKLSEEKIRELIKTWRNLENPHVCPHGRPIYYK 88 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2X4D-A nrPDB 358 1e-99 3HLT-A nrPDB 307 3e-84 2HO4-A nrPDB 303 4e-83 3PDW-A nrPDB 273 5e-74 4BX2-A nrPDB 257 3e-69 1PW5-A nrPDB 252 9e-68 2P27-A nrPDB 252 1e-67 4BKM-A nrPDB 250 5e-67 2C4N-A nrPDB 231 2e-61 4I9G-A nrPDB 199 1e-51 Sequences not found previously or not previously below threshold: 4KNV-A nrPDB 50 1e-06 2GFH-A nrPDB 50 1e-06 3QUB-A nrPDB 48 5e-06 3KC2-A nrPDB 47 6e-06 2YY6-A nrPDB 44 9e-05 3L8H-A nrPDB 43 2e-04 4PNH-A nrPDB 42 3e-04 4RN3-A nrPDB 37 0.006 3KBB-A nrPDB 36 0.013 2O2X-A nrPDB 35 0.043 3L8F-A nrPDB 34 0.053 3L1U-A nrPDB 34 0.062 3OCV-A nrPDB 34 0.064 1RQL-A nrPDB 33 0.12 2HSZ-A nrPDB 33 0.13 2HI0-A nrPDB 33 0.15 1CR6-A nrPDB 33 0.16 2HDO-A nrPDB 32 0.20 3TR2-A nrPDB 32 0.27 1XTZ-A nrPDB 31 0.47 4JB3-A nrPDB 31 0.52 3ZVN-A nrPDB 31 0.64 1M1B-A nrPDB 31 0.64 4GXB-A nrPDB 30 0.76 1U7O-A nrPDB 30 0.86 6BWI-A nrPDB 30 0.96 4DW8-A nrPDB 30 1.0 5HHZ-A nrPDB 29 1.9 5GVX-A nrPDB 29 2.6 3ZWK-A nrPDB 29 3.3 3LEH-A nrPDB 29 3.5 3PCT-A nrPDB 28 5.3 1HV8-A nrPDB 28 5.8 1QME-A nrPDB 27 6.4 1RKQ-A nrPDB 27 7.2 >2X4D-A nrPDB Length = 271 Score = 358 bits (919), Expect = 1e-99, Method: Composition-based stats. Identities = 265/270 (98%), Positives = 266/270 (98%) Query: 1 MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKS 60 MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNES S Sbjct: 2 MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAAS 61 Query: 61 RAELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNC 120 RAELVGQLQRLGFDISEQEVTAPAPAACQILKE+GLRPYLLIHDGVRSEFDQIDTSNPNC Sbjct: 62 RAELVGQLQRLGFDISEQEVTAPAPAACQILKERGLRPYLLIHDGVRSEFDQIDTSNPNC 121 Query: 121 VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYAC 180 VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYY TSGLMLDVGPYMKALEYAC Sbjct: 122 VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLMLDVGPYMKALEYAC 181 Query: 181 GIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRP 240 GIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRP Sbjct: 182 GIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRP 241 Query: 241 SDEHHPEVKADGYVDNLAEAVDLLLQHADK 270 SDEHHPEVKADGYVDNLAEAVDLLLQHADK Sbjct: 242 SDEHHPEVKADGYVDNLAEAVDLLLQHADK 271 >3HLT-A nrPDB Length = 266 Score = 307 bits (787), Expect = 3e-84, Method: Composition-based stats. Identities = 112/258 (43%), Positives = 158/258 (61%), Gaps = 6/258 (2%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQ 69 ++ VL+D+SG L+ A A+ G+ EA+ RL+ + + +RF TN +++S+ +L+ +L+ Sbjct: 6 ALKAVLVDLSGTLHIEDA----AVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLR 61 Query: 70 RLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGES 129 +L FDISE E+ AA +L+ + +RP LL+ D +F I TS+PN VV+ A E Sbjct: 62 KLEFDISEDEIFTSLTAARSLLERKQVRPMLLVDDRALPDFKGIQTSDPNAVVMGLAPEH 121 Query: 130 FSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGK 189 F YQ +N AF++L L+ LI++ K RYYK GL L GP++ ALEYA KA VVGK Sbjct: 122 FHYQILNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKATVVGK 179 Query: 190 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVK 249 P FF AL+ G E +AVMIGDD DVGGAQ GM + V+TGK+R SDE Sbjct: 180 PEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKYRASDEEKINPP 239 Query: 250 ADGYVDNLAEAVDLLLQH 267 ++ AVD +LQH Sbjct: 240 PYLTCESFPHAVDHILQH 257 >2HO4-A nrPDB Length = 259 Score = 303 bits (777), Expect = 4e-83, Method: Composition-based stats. Identities = 104/258 (40%), Positives = 155/258 (60%), Gaps = 6/258 (2%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQ 69 ++ VL+D++G L+ A A+ G+ EA+ RL+ + + VRF TN +++++ +L+ +L+ Sbjct: 6 ALKAVLVDLNGTLHIEDA----AVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLK 61 Query: 70 RLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGES 129 +L F+ISE E+ AA +++++ +RP LL+ D EF + T +PN VVI A E Sbjct: 62 KLEFEISEDEIFTSLTAARNLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEH 121 Query: 130 FSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGK 189 F YQ +N AF++L L+ LI++ K RYYK GL L GP++ ALEYA KA VVGK Sbjct: 122 FHYQLLNQAFRLL--LDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGK 179 Query: 190 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVK 249 P FF AL+ +AVMIGDD DV GAQ GM + V+TGK++ +DE Sbjct: 180 PEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPP 239 Query: 250 ADGYVDNLAEAVDLLLQH 267 ++ AVD +LQH Sbjct: 240 PYLTCESFPHAVDHILQH 257 >3PDW-A nrPDB Length = 266 Score = 273 bits (698), Expect = 5e-74, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 13/263 (4%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +G L+D+ G +Y+ G I + E V LK + F TN S ++ ++ + Sbjct: 3 LKTYKGYLIDLDGTMYN----GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADK 58 Query: 68 LQRLGFDISEQEVTAPAPAACQILKEQ--GLRPYLLIHDGVRSEFDQ----IDTSNPNCV 121 L +E++V + A Q + +Q Y++ +G+R ++ N + V Sbjct: 59 LVSFDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQAIEENGLTFGGENADFV 118 Query: 122 VIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACG 181 V+ S +Y+ A L IS GL+ G L + G Sbjct: 119 VVG-IDRSITYEKF--AVGCLAIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTG 175 Query: 182 IKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPS 241 ++ +GKP + A++ +G + + +M+GD+ D+ GM L V TG + Sbjct: 176 VQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKRE 235 Query: 242 DEHHPEVKADGYVDNLAEAVDLL 264 K +D+L E + + Sbjct: 236 HMTDDMEKPTHAIDSLTEWIPYI 258 >4BX2-A nrPDB Length = 293 Score = 257 bits (657), Expect = 3e-69, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 128/280 (45%), Gaps = 28/280 (10%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +GVL D GVL++ G + G+ E + RL R+ F +N S+++R EL + Sbjct: 17 LGQAQGVLFDCDGVLWN----GERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALR 72 Query: 68 LQRLGF-DISEQEVTAPAPAACQILKEQGLRP-------YLLIHDGVRSEFDQID----- 114 RLGF + +++ + A A ++L+++ P ++L +G+R+E Sbjct: 73 FARLGFAGLRAEQLFSSALCAARLLRQRLPGPPDASGAVFVLGGEGLRAELRAAGLRLAG 132 Query: 115 --TSNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLM-LDVG 170 +P V+ E FS+ + A L + + +L++ + ++ + G G Sbjct: 133 DPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDC-LLVATDRDPWHPLSDGSRTPGTG 191 Query: 171 PYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA 230 A+E A G +A VVGKPSP F+ + V+ + +M+GD + D+ RCGM Sbjct: 192 SLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTT 251 Query: 231 LQVRTGKFRPSDEHHPEVK------ADGYVDNLAEAVDLL 264 + TG + YV+++A+ ++ L Sbjct: 252 VLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGL 291 >1PW5-A nrPDB Length = 253 Score = 252 bits (644), Expect = 9e-68, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 14/259 (5%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L + +LD+ G Y + + GS+E + LK + F TN S + V + Sbjct: 2 LDKIELFILDMDGTFYLDDS----LLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRK 57 Query: 68 LQRLGFDISEQEVTAP-APAACQILKEQG-LRPYLLIHDGVRSEFDQ----IDTSNPNCV 121 L+ +G D+ + V A +LK G R +LL ++ F+ ID NP+ V Sbjct: 58 LRNMGVDVPDDAVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFV 117 Query: 122 VIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACG 181 V+ ++ +Y+ + A +L + I+ G + D G M A+E + G Sbjct: 118 VLG-FDKTLTYERLKKACILL--RKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTG 174 Query: 182 IKAEVV-GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRP 240 K +++ GKP+P + GV + M+GD + DV + G+ ++ V TG+ P Sbjct: 175 RKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTP 234 Query: 241 SDEHHPEVKADGYVDNLAE 259 D E K D NL E Sbjct: 235 EDLERAETKPDFVFKNLGE 253 >2P27-A nrPDB Length = 306 Score = 252 bits (643), Expect = 1e-67, Method: Composition-based stats. Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 32/279 (11%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +GVL D GVL++ G A+ G+ E + RL R+ F +N S+++R EL + Sbjct: 18 LGRAQGVLFDCDGVLWN----GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALR 73 Query: 68 LQRLGFD-ISEQEVTAPAPAACQILKEQGLRP-------YLLIHDGVRSEFDQI------ 113 RLGF + +++ + A A ++L+++ P ++L +G+R+E Sbjct: 74 FARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAG 133 Query: 114 -----DTSNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLM- 166 D + P V+ E FS+ + A L + E +L++ + ++ + G Sbjct: 134 DPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT 192 Query: 167 LDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRC 226 G A+E A G +A VVGKPSP F+ + ++ + +M+GD + D+ RC Sbjct: 193 PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRC 252 Query: 227 GMRALQVRTGKFRPSDEH------HPEVKADGYVDNLAE 259 GM + TG R + ++ YV+++A+ Sbjct: 253 GMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIAD 291 >4BKM-A nrPDB Length = 309 Score = 250 bits (638), Expect = 5e-67, Method: Composition-based stats. Identities = 65/292 (22%), Positives = 129/292 (44%), Gaps = 39/292 (13%) Query: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67 L +GVL D GVL++ G + G+ E + RL R+ F +N S+++R EL + Sbjct: 20 LGQAQGVLFDCDGVLWN----GERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALR 75 Query: 68 LQRLGF-DISEQEVTAPAPAACQILKEQ-----GLRPYLLIHDGVRSEFDQIDTSN---- 117 RLGF + +++ + A A ++L+++ + Y+L + +E + + ++ Sbjct: 76 FARLGFAGLRAEQLFSSALCAARLLRQRLAGVPDPKAYVLGSPALAAELEAVGVTSVGVG 135 Query: 118 PNCV-------------------VIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRY 158 P+ + V+ FSY + A + L + + ++ + R Sbjct: 136 PDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQPDCLLVGTNMDNRL 195 Query: 159 YKETSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVG 218 E + G ++A+E A +A+++GKPSP F+ + V+ + +M+GD + Sbjct: 196 PLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSPYMFQCITEDFSVDPARTLMVGDRLET 255 Query: 219 DVGGAQRCGMRALQVRTGKFRPSDEHHPEVK------ADGYVDNLAEAVDLL 264 D+ RCGM + TG + YV+++A+ ++ L Sbjct: 256 DILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGL 307 >2C4N-A nrPDB Length = 250 Score = 231 bits (590), Expect = 2e-61, Method: Composition-based stats. Identities = 55/261 (21%), Positives = 108/261 (41%), Gaps = 18/261 (6%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQ 69 ++ V+ DI GVL A+ G+ E + + L + TN ++ +L + Sbjct: 2 TIKNVICDIDGVLMHDN----VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFA 57 Query: 70 RLGFDISEQEVTAPAPAACQILKEQ-GLRPYLLI-----HDGVRSEFDQIDTSNPNCVVI 123 G D+ + A A L+ Q G + Y++ H+ ++ F D NP+ V++ Sbjct: 58 TAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDV-NPDFVIV 116 Query: 124 ADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIK 183 + S+++ M+ A + I+ + G G +E G K Sbjct: 117 GET-RSYNWDMMHKAAYFVA--NGARFIATNPDTH---GRGFYPACGALCAGIEKISGRK 170 Query: 184 AEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDE 243 VGKPSP ++AL + + + V++GD++ D+ + G+ + V +G D Sbjct: 171 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDI 230 Query: 244 HHPEVKADGYVDNLAEAVDLL 264 + ++AE +D++ Sbjct: 231 DSMPFRPSWIYPSVAE-IDVI 250 >4I9G-A nrPDB Length = 361 Score = 199 bits (505), Expect = 1e-51, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 22/245 (8%) Query: 14 VLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGF 73 +L+D+ G ++ G G+V+++++++ +L F TN + +S E+ L LGF Sbjct: 19 LLIDLDGTVF----CGRQPTGGAVQSLSQVRSRKL---FVTNNASRSADEVAAHLCELGF 71 Query: 74 DISEQEVTAPAPAACQILKEQ---GLRPYLLIHDGVRSEFDQIDT-------SNPNCVVI 123 + ++V A +A +L Q G R ++ + + +E + P+ VV Sbjct: 72 TATGEDVVTSAQSAAHLLAGQLAPGARVLIVGTEALANEVAAVGLRPVRRFEDRPDAVV- 130 Query: 124 ADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIK 183 G S + + A L + ++ GL+ G + AL A G+ Sbjct: 131 --QGLSMTTGWSDLAEAALAIRAGALWVAANVDPTLPTERGLLPGNGSMVAALRTATGMD 188 Query: 184 AEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDE 243 V GKP+P A+ A A+++GD + D+ GA G+ +L V TG D Sbjct: 189 PRVAGKPAPALMTEAVARGDFRA--ALVVGDRLDTDIEGANAAGLPSLMVLTGVNSAWDA 246 Query: 244 HHPEV 248 + E Sbjct: 247 VYAEP 251 >4KNV-A nrPDB Length = 241 Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 3/103 (2%) Query: 128 ESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVV 187 + + A + E +L+ R + Y A+ + E Sbjct: 101 QHMTLAEDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAVVVGGEQREE-- 158 Query: 188 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA 230 KP+P F +GV+ VM+GD + D+ G G++A Sbjct: 159 -KPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLKA 200 >2GFH-A nrPDB Length = 260 Score = 49.7 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 7/118 (5%) Query: 149 VLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQ 208 +L+ R + Y A+ K E KP+P F +GV+ Sbjct: 139 LLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEE---KPAPSIFYHCCDLLGVQPGD 195 Query: 209 AVMIGDDIVGDVGGAQRCGMRAL--QVRTG--KFRPSDEHHPEVKADGYVDNLAEAVD 262 VM+GD + D+ G G++A ++G S H V + + L +++D Sbjct: 196 CVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQSID 253 >3QUB-A nrPDB Length = 243 Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 94/245 (38%), Gaps = 52/245 (21%) Query: 1 MAPWGKRL-AGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQK 59 + P G + ++ VL D+ GVL++S + EA ++ ++ Sbjct: 13 LVPRGSHMRKKLKAVLFDMDGVLFNS-------MPYHSEAWHQVMKTH------------ 53 Query: 60 SRAELVGQLQRLGFDISEQEVTAPA----PAACQILKEQGLRPYLLIHDGVRSEFDQIDT 115 G D+S +E A + I+ ++ L + + E + I Sbjct: 54 ------------GLDLSREEAYMHAGRTGASTINIVFQRE-----LGKEATQEEIESIYH 96 Query: 116 SNPNCVVIADAGESFSYQNMNNAFQVLMELEK---PVLISLGKGRYYKETSGLMLDVGPY 172 ++ E+ + M A+++L +++ ++ G G+ G + Sbjct: 97 EK--SILFNSYPEA---ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEHNFPGMF 151 Query: 173 MKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQ 232 K L + GKP+PE + AL+ G++A +AV+I ++ V + G+ + Sbjct: 152 HKEL-MVTAFDVKY-GKPNPEPYLMALKKGGLKADEAVVI-ENAPLGVEAGHKAGIFTIA 208 Query: 233 VRTGK 237 V TG Sbjct: 209 VNTGP 213 >3KC2-A nrPDB Length = 352 Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 10/108 (9%) Query: 13 GVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNE---SQKSRAELVGQLQ 69 DI GVL+ G IAG+ +A+ L R+++ TN S+++R E + Sbjct: 15 AFAFDIDGVLF----RGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFIS--S 68 Query: 70 RLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSN 117 +L D+S ++ ++ + R + VR + + Sbjct: 69 KLDVDVSPLQIIQSHTPYKSLVNKY-SRILAVGTPSVRGVAEGYGFQD 115 Score = 43.6 bits (101), Expect = 9e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 207 HQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQ 266 H M+GD+ D+ GAQ G + V+TG + D+ E K V+++ +AV L+ Sbjct: 291 HAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNEGDDLK-ECKPTLIVNDVFDAVTKTLE 349 >2YY6-A nrPDB Length = 213 Score = 43.6 bits (101), Expect = 9e-05, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEV 248 KPSP L+ +G E +A+++GD D+ +R G + G + + + Sbjct: 137 KPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTKTALALWGYVKLNSQI---- 191 Query: 249 KADGYVDNLAEAVDLLLQH 267 D + ++ V L+ H Sbjct: 192 -PDFTLSRPSDLVKLMDNH 209 >3L8H-A nrPDB Length = 179 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEV 248 KP P ++ + V+ +GD + D+ A + G V+TG R + Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLR-DLQAAAQAGCAPWLVQTGNGRKTLAQGGLP 159 Query: 249 KADGYVDNLAEAVDLLLQHA 268 + ++LA + LLQ A Sbjct: 160 EGTRVCEDLAAVAEQLLQEA 179 Score = 30.1 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 11 VRGVLLDISGVL------YDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSR 61 ++ ++LD GV+ + A+ GS++A+ARL ++ V TN+S +R Sbjct: 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLAR 57 >4PNH-A nrPDB Length = 199 Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPS 241 KP P K + ++ ++GD + D+ G R V TGK + + Sbjct: 119 KPMPGMMKLIAERFEIDPADTPVVGDSLR-DLQAGAALGFRPHLVLTGKGKKT 170 Score = 33.5 bits (75), Expect = 0.096, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 55/174 (31%), Gaps = 29/174 (16%) Query: 12 RGVLLDISGVL------YDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSR---- 61 + V+LD GV+ + A+ GS+EA+ARL + +V TN+S R Sbjct: 20 KLVVLDRDGVINVDSDAFVKSPDEWVALPGSLEAIARLNHAGYRVVVATNQSGIGRGLFD 79 Query: 62 ------AELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDT 115 L V A + P ++ R E D DT Sbjct: 80 MATLNAMHLKMHRAAAAVGGRIDAVFFCPHTADDHCDCRKPMPGMMKLIAERFEIDPADT 139 Query: 116 SNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDV 169 V+ D+ A L P L+ GKG+ GL Sbjct: 140 P-----VVGDSLRDL------QAGAALGFR--PHLVLTGKGKKTLAAGGLPEGT 180 >4RN3-A nrPDB Length = 213 Score = 37.4 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 70/228 (30%), Gaps = 55/228 (24%) Query: 9 AGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSR------- 61 ++ V+ D GV++DS ++ R+ + R + ++ R Sbjct: 9 GAIKAVIYDCDGVMFDS-------FEANLAFYQRIMEMMGRPRLSRDNEEQMRILHTYAN 61 Query: 62 AELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCV 121 E++ F A + + L P +++ +G R + +DT Sbjct: 62 REVLAHF----FPSPGD--WEEAVRCAGAIDYRELVPLMIMEEGFR---EALDTLKGRVG 112 Query: 122 VIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACG 181 + S S + L SL T+ + + Sbjct: 113 LGVCTNRSTSMDMV------------LRLFSLDSYFSIVMTASRVTNP------------ 148 Query: 182 IKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMR 229 KP PE L+ G+ +A+ +GD D A+ G+ Sbjct: 149 -------KPHPEPLLKVLEHFGIGPREALFVGDS-EVDRLSAEAAGVP 188 >3KBB-A nrPDB Length = 216 Score = 36.2 bits (82), Expect = 0.013, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 44/223 (19%) Query: 11 VRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRS-RLKVRFCTNESQKSRAELVGQLQ 69 + V+ D+ GVL D+ EA R+ S +L ++ Sbjct: 1 MEAVIFDMDGVLMDTE-------PLYFEAYRRVAESYGKPYT----------EDLHRRI- 42 Query: 70 RLGFDISEQ-EVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGE 128 +G E + A L+ R H+ + F ++ NP Sbjct: 43 -MGVPEREGLPILMEALEIKDSLENFKKRV----HEEKKRVFSELLKENPGV-------- 89 Query: 129 SFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVG 188 A + + + ++ + LD+ Y + + +K G Sbjct: 90 -------REALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKN---G 139 Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRAL 231 KP PE + L+ + V + V++ +D V A+ G+ + Sbjct: 140 KPDPEIYLLVLERLNVVPEK-VVVFEDSKSGVEAAKSAGIERI 181 >2O2X-A nrPDB Length = 218 Score = 34.7 bits (78), Expect = 0.043, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGM 228 KP+P A + + ++ +++++GD + D+ +R G+ Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLA-DMQAGKRAGL 175 >3L8F-A nrPDB Length = 187 Score = 34.3 bits (77), Expect = 0.053, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA-LQVRTGKFRPSDEHHPE 247 KP P SA + ++ + M+GD + D+ A + + VRTGK + + Sbjct: 111 KPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQAAVAANVGTKVLVRTGKPITPEAENAA 169 Query: 248 VKADGYVDNLAEAV 261 + +L +A+ Sbjct: 170 DWVLNSLADLPQAI 183 >3L1U-A nrPDB Length = 211 Score = 34.3 bits (77), Expect = 0.062, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA-LQVRTGKFRPSDEHHPE 247 KP P SA + ++ + M+GD + D+ A + + VRTGK + + Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQAAVAANVGTKVLVRTGKPITPEAENAA 189 Query: 248 VKADGYVDNLAEAV 261 + +L +A+ Sbjct: 190 DWVLNSLADLPQAI 203 >3OCV-A nrPDB Length = 262 Score = 34.3 bits (77), Expect = 0.064, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%) Query: 26 GAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAE-LVGQLQRLGFDISEQEVT--- 81 A A+ G+VE + KV + TN + + ++RLGF+ E+ Sbjct: 96 DARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLK 155 Query: 82 --APAPAAC-QILKEQGLRPYLLIHDGV 106 A AA +++QG L + D + Sbjct: 156 KDKSAKAARFAEIEKQGYEIVLYVGDNL 183 >1RQL-A nrPDB Length = 267 Score = 33.2 bits (74), Expect = 0.12, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 18/131 (13%) Query: 125 DAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGP--------YMKAL 176 +A Y+ ++ + ++ + G+ + + Sbjct: 80 EADIQEMYEEFEEILFAILPRYASPINAVKEVIASLRERGIKIGSTTGYTREMMDIVAKE 139 Query: 177 EYACGIKAEVV--------GKPSPEF-FKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCG 227 G K + + G+P P +K+A++ + + +GD + D+ + G Sbjct: 140 AALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTV-SDMKEGRNAG 198 Query: 228 MRALQVRTGKF 238 M + V G Sbjct: 199 MWTVGVILGSS 209 >2HSZ-A nrPDB Length = 243 Score = 33.2 bits (74), Expect = 0.13, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 3/71 (4%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEV 248 KP P F G+ Q + +GD D+ A G + + G + + Sbjct: 170 KPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVVGLTYGYNY--NIPIAQS 226 Query: 249 KADGYVDNLAE 259 K D D+ A+ Sbjct: 227 KPDWIFDDFAD 237 >2HI0-A nrPDB Length = 240 Score = 32.8 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 169 VGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGM 228 G + ++A G K+ + KP+P+ ++ +GV + V IGD D+ A+ M Sbjct: 149 PGSF----DFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDS-EIDIQTARNSEM 203 Query: 229 RALQVRTG 236 + V G Sbjct: 204 DEIAVNWG 211 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 21/43 (48%) Query: 32 AIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGFD 74 G ++ + L++ +K+ +N+ ++ LV +L FD Sbjct: 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPGSFD 153 >1CR6-A nrPDB Length = 554 Score = 32.8 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHP 246 KP P+ + L + + ++ V + DD ++ A+ GM + V + Sbjct: 160 KPEPQIYNFLLDTLKAKPNEVVFL-DDFGSNLKPARDMGMVTILVHNTASALRELEKV 216 >2HDO-A nrPDB Length = 209 Score = 32.4 bits (72), Expect = 0.20, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 69/237 (29%), Gaps = 45/237 (18%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQ 69 + ++ DI G L +S T + L Sbjct: 3 TYQALMFDIDGTLTNSQPAYTTVMR------EVLATYGKPF------------------- 37 Query: 70 RLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGES 129 Q AA Q + E G+ SEFD + V+ + + Sbjct: 38 -----SPAQAQKTFPMAAEQAMTELGI---------AASEFDHFQAQYED-VMASHYDQI 82 Query: 130 FSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGK 189 Y + + F+ L + L + R + SG+ A+ + + K Sbjct: 83 ELYPGITSLFEQL--PSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR--K 138 Query: 190 PSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHP 246 P P +AL+ + V A+ IGD + D AQ + G +D Sbjct: 139 PDPLPLLTALEKVNVAPQNALFIGDSV-SDEQTAQAANVDFGLAVWGMDPNADHQKV 194 >3TR2-A nrPDB Length = 239 Score = 32.0 bits (71), Expect = 0.27, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Query: 58 QKSRAELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSN 117 Q+ ++V ++ L V A A +L++Q R +LL+ G+R E D+ Sbjct: 139 QEKVPDIVCRMATLAKSAGLDGVVCSAQEAA-LLRKQFDRNFLLVTPGIRLETDEKGDQK 197 Query: 118 ----PNCVVIADAG 127 P + A + Sbjct: 198 RVMTPRAAIQAGSD 211 >1XTZ-A nrPDB Length = 264 Score = 31.2 bits (69), Expect = 0.47, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%) Query: 19 SGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGFDISEQ 78 G G+ +L + K +S+K + +G+ R G I + Sbjct: 107 DGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKHLGKNWRQGVPI--E 164 Query: 79 EVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNA 138 V + L EQ + I G ++ + T N N ++ AD GE + ++ Sbjct: 165 IVPSSYVRVKNDLLEQLHAEKVDIRQGGSAKAGPVVTDNNNFIIDADFGEISDPRKLHRE 224 Query: 139 FQVLM-ELEKPVLISLGKGRYYKETSGLM 166 ++L+ +E + I Y+ + G + Sbjct: 225 IKLLVGVVETGLFIDNASKAYFGNSDGSV 253 >4JB3-A nrPDB Length = 228 Score = 31.2 bits (69), Expect = 0.52, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 189 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEH 244 KP+PE F ++ V + + + DD ++ + G Q G + Sbjct: 169 KPAPEIFDFMIKDSHVIPSETLFV-DDGSSNIHIGKELGFETFQPENGADWRQELT 223 >3ZVN-A nrPDB Length = 416 Score = 30.8 bits (68), Expect = 0.64, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 5/76 (6%) Query: 57 SQKSRAEL--VGQLQRLGFDIS---EQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFD 111 + + + +L L + +E PAA L R E Sbjct: 192 PGRKKKDFSCADRLFALNVGLPFATPEEFFLKWPAARFELPAFDPRTISSAGPLYLPESS 251 Query: 112 QIDTSNPNCVVIADAG 127 + + NP VV Sbjct: 252 SLLSPNPEVVVAVGFP 267 >1M1B-A nrPDB Length = 295 Score = 30.8 bits (68), Expect = 0.64, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 14/141 (9%) Query: 109 EFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMEL-EKPVLISLGKGRYYKETSGLML 167 E + + + ++ DA Y N NNA +++ +L ++ V + + + + +T+ L Sbjct: 69 EVLEFMSDASDVPILLDADT--GYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHD 126 Query: 168 D-VGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIG---DDIVGDVGGA 223 P E+A IKA + P+F + + +A + G D+ + Sbjct: 127 GRAQPLADIEEFALKIKACKDSQTDPDF--CIVARV-----EAFIAGWGLDEALKRAEAY 179 Query: 224 QRCGMRALQVRTGKFRPSDEH 244 + G A+ + + K PSD Sbjct: 180 RNAGADAILMHSKKADPSDIE 200 >4GXB-A nrPDB Length = 280 Score = 30.5 bits (67), Expect = 0.76, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 9/126 (7%) Query: 35 GSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGFDISEQEVTAPAPAACQILKEQ 94 G+ V +L+ L T E L++ +D + + +L Q Sbjct: 63 GAFSFVRKLQEFELPYVSVT---SLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQ 119 Query: 95 GL----RPYLLIHDGVRSEFDQID--TSNPNCVVIADAGESFSYQNMNNAFQVLMELEKP 148 + R ++L+ + + S + +A + Y + E + P Sbjct: 120 TVSDIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCP 179 Query: 149 VLISLG 154 V++S G Sbjct: 180 VVVSAG 185 >1U7O-A nrPDB Length = 164 Score = 30.5 bits (67), Expect = 0.86, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 4/95 (4%) Query: 12 RGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRL 71 + + D+ L+ + ++ R + E E++G+LQ L Sbjct: 6 KLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEV----PEVLGRLQSL 61 Query: 72 GFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGV 106 G ++ T+ A Q+L+ L Y + + Sbjct: 62 GVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY 96 >6BWI-A nrPDB Length = 977 Score = 30.1 bits (66), Expect = 0.96, Method: Composition-based stats. Identities = 10/75 (13%), Positives = 28/75 (37%), Gaps = 5/75 (6%) Query: 22 LYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGFDISEQEVT 81 ++ G+ ++ G+ + + R E R +L + + +G D+ + Sbjct: 379 FWEMGSNAVSSALGACLLLRVMARLEPDA-----EEAARRKDLAFKFEGMGVDLFGECYR 433 Query: 82 APAPAACQILKEQGL 96 + A ++L + Sbjct: 434 SSEVRAARLLLRRCP 448 >4DW8-A nrPDB Length = 279 Score = 30.1 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQ 69 + ++LD+ G L +S + + E + R++ +++ + L +L+ Sbjct: 4 KYKLIVLDLDGTLTNSK---KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELR 60 Query: 70 RLGFD 74 F Sbjct: 61 MNEFG 65 >5HHZ-A nrPDB Length = 524 Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 11/93 (11%) Query: 19 SGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVR-FCTNESQKSRAELVGQLQRLG----F 73 ++ A +A+ G+ E++ L R ++ FC ++ L G R F Sbjct: 425 DEEVFYLVAFLRSALPGAPESLEALARQNQRILDFCAGTGIGAKQYLPGHKARHEWAEHF 484 Query: 74 DISEQEVTAPAPAACQILKEQGLRPYLLIHDGV 106 + + ++ E R L G+ Sbjct: 485 GAARWDRF------ARLKAEFDPRAILAAGQGI 511 >5GVX-A nrPDB Length = 430 Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 9/64 (14%) Query: 13 GVLLDISGVLYD--SGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQR 70 V D G L D G++EA+ +L S +L QR Sbjct: 182 AVFFDFDGTLSDIVEDPDAAWLAPGALEALQKLAARCPIAVL-------SGRDLADVTQR 234 Query: 71 LGFD 74 +G Sbjct: 235 VGLP 238 >3ZWK-A nrPDB Length = 259 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Query: 14 VLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQK 59 V D+ G L D + + EA+ RL+ + V T +++K Sbjct: 3 VFTDLDGTLLDERGE----LGPAREALERLRALGVPVVPVTAKTRK 44 >3LEH-A nrPDB Length = 425 Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 2/57 (3%) Query: 64 LVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNC 120 L + + G + + +L ++ R +L + + D +D PN Sbjct: 170 LASDIAKYGIGTPGES--TQGAGSIAMLVKKDPRILILHDETLAQTRDIMDFWRPNY 224 >3PCT-A nrPDB Length = 260 Score = 27.8 bits (60), Expect = 5.3, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 26 GAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQK-SRAELVGQLQRLGFD 74 A AI G+VE + + + F +N +A V ++RLGF Sbjct: 96 DARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 >1HV8-A nrPDB Length = 367 Score = 27.8 bits (60), Expect = 5.8, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 7/88 (7%) Query: 38 EAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGFD---ISEQEVTAPAPAACQILKEQ 94 EA+ RL +++ ++++ EL L+ +GF I + ++ K++ Sbjct: 228 EALCRLLKNKEFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQK 287 Query: 95 GLRPYLLIHDGVRSEFDQIDTSNPNCVV 122 +R + R ID ++ NCV+ Sbjct: 288 KIRILIATDVMSR----GIDVNDLNCVI 311 >1QME-A nrPDB Length = 702 Score = 27.4 bits (59), Expect = 6.4, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 16/154 (10%) Query: 73 FDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCV--VIADAGESF 130 + Q V + QI E+ + + D + S NP+ + V E + Sbjct: 489 VTVPGQNVALKS-GTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEHY 547 Query: 131 SYQNMNNAFQVLMELEKPVLISLGKGRY------------YKETSGLMLDVGPYMKALEY 178 S + ++E + SL Y S + G + L Sbjct: 548 SGIQLGEFANPILERASAMKDSLNLQTTAKALEQVSQQSPYPMPSVKDISPGDLAEELRR 607 Query: 179 ACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMI 212 ++ VVG + SA + + +Q V+I Sbjct: 608 NL-VQPIVVGTGTKIKNSSAEEGKNLAPNQQVLI 640 >1RKQ-A nrPDB Length = 282 Score = 27.4 bits (59), Expect = 7.2, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 3/59 (5%) Query: 10 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQL 68 ++ + +D+ G L T A+A + + V T + +L Sbjct: 4 AIKLIAIDMDGTLLLPD---HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKEL 59 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.131 0.314 Lambda K H 0.267 0.0395 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,595,514 Number of Sequences: 36641 Number of extensions: 302154 Number of successful extensions: 1081 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 986 Number of HSP's gapped (non-prelim): 86 length of query: 270 length of database: 10,336,785 effective HSP length: 95 effective length of query: 175 effective length of database: 6,855,890 effective search space: 1199780750 effective search space used: 1199780750 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.0 bits)