BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9FRV0 (266 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4DYG-A nrPDB 504 e-143 2BAA-A nrPDB 454 e-128 3CQL-A nrPDB 383 e-107 3IWR-A nrPDB 375 e-105 4TX7-A nrPDB 375 e-104 4MST-A nrPDB 372 e-104 3W3E-A nrPDB 341 2e-94 1DXJ-A nrPDB 335 9e-93 2Z38-A nrPDB 325 1e-89 3HBH-A nrPDB 192 8e-50 5H7T-A nrPDB 186 8e-48 4IJ4-A nrPDB 176 1e-44 2CJL-A nrPDB 163 8e-41 4MCK-A nrPDB 162 1e-40 1WVU-A nrPDB 153 8e-38 4OK7-A nrPDB 40 0.001 3EDF-A nrPDB 27 9.5 >4DYG-A nrPDB Length = 244 Score = 504 bits (1298), Expect = e-143, Method: Compositional matrix adjust. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF Sbjct: 2 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 61 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS Sbjct: 62 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 121 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG Sbjct: 122 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 181 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 263 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR Sbjct: 182 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 241 Query: 264 PFA 266 PFA Sbjct: 242 PFA 244 >2BAA-A nrPDB Length = 243 Score = 454 bits (1169), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/243 (91%), Positives = 233/243 (95%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 SVSSI+S AQFDRMLLHRNDGACQAKGFYTYDAFVAAA AFPGFG TGS DA+KR+VAAF Sbjct: 1 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF 60 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 LAQTSHETTGGWATAPDGAFAWGYCFKQERGA++DYCTPSAQWPCAPGKRYYGRGPIQLS Sbjct: 61 LAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLS 120 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 HNYNYGPAGRAIGVDLL NPDLVATD TV FKTA+WFWMTAQ PKPSSHAVI G+WSPSG Sbjct: 121 HNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSG 180 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 263 ADRAAGR PGFGVITNIINGG+ECGHGQDSRVADRIGFYKRYCDILGVGYG+NLDCY+QR Sbjct: 181 ADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQR 240 Query: 264 PFA 266 PFA Sbjct: 241 PFA 243 >3CQL-A nrPDB Length = 243 Score = 383 bits (983), Expect = e-107, Method: Compositional matrix adjust. Identities = 176/241 (73%), Positives = 202/241 (83%) Query: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 84 + IIS + FD+ML HRN+ AC AKGFYTYDAF+AAA +FP FG TGSTD RKR++AAFL Sbjct: 2 IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFL 61 Query: 85 AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSH 144 QTSHETTGGW +APDG +AWGYCF +ER +++YC PS ++PCAPGK YYGRGPIQLS Sbjct: 62 GQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPIQLSW 121 Query: 145 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGA 204 NYNYGP G A+ V+LL NPDLVATD +SFKTALWFWMT QAPKPS H VITG+W PS A Sbjct: 122 NYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWMTPQAPKPSCHDVITGRWQPSAA 181 Query: 205 DRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRP 264 D AAGR PG+GVITNIINGGLECG G + +VADRIGF++RYC ILGVG G+NLDCYNQRP Sbjct: 182 DTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDCYNQRP 241 Query: 265 F 265 F Sbjct: 242 F 242 >3IWR-A nrPDB Length = 309 Score = 375 bits (964), Expect = e-105, Method: Compositional matrix adjust. Identities = 184/241 (76%), Positives = 207/241 (85%) Query: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 84 V SI+ F+R+LLHRNDGAC A+GFYTY+AF+AAA AFP FG TG+T+ RKR+VAAFL Sbjct: 58 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFL 117 Query: 85 AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSH 144 QTSHETTGGW TAPDG F+WGYCFKQE+ +DYC PS +WPCAPG++YYGRGPIQLS Sbjct: 118 GQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSF 177 Query: 145 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGA 204 N+NYGPAGRAIGVDLL NPDLVATD TVSFKTALWFWMT Q KPSSH VITG+W+PS A Sbjct: 178 NFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPA 237 Query: 205 DRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRP 264 D AAGRAPG+GVITNI+NGGLECGHG D RVA+RIGFY+RYC G+G G NLDCYNQRP Sbjct: 238 DAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRP 297 Query: 265 F 265 F Sbjct: 298 F 298 >4TX7-A nrPDB Length = 245 Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust. Identities = 172/245 (70%), Positives = 205/245 (83%), Gaps = 1/245 (0%) Query: 21 AHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDV 80 A +S++I A FD+ML HRNDGAC A+GFYTYDAF+AAA AFP FG TG T RKR++ Sbjct: 1 APSDLSALIPRATFDQMLKHRNDGACPARGFYTYDAFIAAARAFPSFGNTGDTATRKREI 60 Query: 81 AAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPI 140 AAFL QTSHETTGGW +APDG +AWGYCF +E+ +A YC+P+ Q+PCA G++YYGRGPI Sbjct: 61 AAFLGQTSHETTGGWPSAPDGPYAWGYCFVREQNPSA-YCSPTPQFPCASGQQYYGRGPI 119 Query: 141 QLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWS 200 Q+S NYNYG G AIGVDL+ NPDLVATDP VSFK+A+WFWMT Q+PKPSSH VIT +W+ Sbjct: 120 QISWNYNYGQCGNAIGVDLINNPDLVATDPVVSFKSAIWFWMTPQSPKPSSHDVITSQWT 179 Query: 201 PSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCY 260 PS AD AAG+ PG+G +TNIINGGLECG GQDSRV DRIGF+K+YCD+ GVGYG+NLDCY Sbjct: 180 PSAADVAAGKLPGYGTVTNIINGGLECGRGQDSRVEDRIGFFKQYCDLFGVGYGNNLDCY 239 Query: 261 NQRPF 265 +Q PF Sbjct: 240 SQAPF 244 >4MST-A nrPDB Length = 242 Score = 372 bits (955), Expect = e-104, Method: Compositional matrix adjust. Identities = 171/239 (71%), Positives = 195/239 (81%) Query: 27 SIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQ 86 SIIS + F+ ML HRND AC AKGFYTYDAF++AA AFP FG TG D KR++AAF Q Sbjct: 1 SIISRSTFEEMLKHRNDAACPAKGFYTYDAFISAAKAFPAFGTTGDVDTCKREIAAFFGQ 60 Query: 87 TSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNY 146 TSH TTGGW TAPDG +AWGYC+K+E A+ YC+PS +PCAPGK+YYGRGPIQLS NY Sbjct: 61 TSHATTGGWPTAPDGPYAWGYCYKEELNQASSYCSPSPAYPCAPGKKYYGRGPIQLSWNY 120 Query: 147 NYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADR 206 NYG G+A+G+DLL NPDLVATD +SFK A+WFWMT Q PKPS H VITG+WSP+G D Sbjct: 121 NYGQCGQALGLDLLNNPDLVATDRVISFKAAIWFWMTPQFPKPSCHDVITGQWSPTGHDI 180 Query: 207 AAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPF 265 +AGRAPG+GVITNIINGGLECG G D+RV DRIGFYKRYCD+ VGYG NLDCYNQ PF Sbjct: 181 SAGRAPGYGVITNIINGGLECGRGWDARVEDRIGFYKRYCDMFAVGYGSNLDCYNQTPF 239 >3W3E-A nrPDB Length = 242 Score = 341 bits (875), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 161/242 (66%), Positives = 186/242 (76%), Gaps = 2/242 (0%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 V S+I + FD++L HRND AC+ KGFY+Y+AF+ AA +F FG TG ++ RKR+VAAF Sbjct: 2 EVGSVIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAAF 61 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 LAQTSHETTGG AT+PDG +AWGYCF ER + YC S PC+ GK YYGRGPIQL+ Sbjct: 62 LAQTSHETTGGAATSPDGPYAWGYCFVTERDKSNRYCDGSG--PCSAGKSYYGRGPIQLT 119 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 HNYNY AGRA+GVDL+ NPDLVA D VSFKTALWFWMT Q KPS H VIT +W+PS Sbjct: 120 HNYNYNAAGRALGVDLINNPDLVARDAVVSFKTALWFWMTPQGNKPSCHDVITNRWTPSA 179 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 263 AD+AA R PGFGVITNIINGGLECG G DRIGFYKRYCD+ GV YG NL+C +QR Sbjct: 180 ADKAANRVPGFGVITNIINGGLECGKGPTPASGDRIGFYKRYCDVFGVSYGPNLNCRDQR 239 Query: 264 PF 265 PF Sbjct: 240 PF 241 >1DXJ-A nrPDB Length = 242 Score = 335 bits (860), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 159/241 (65%), Positives = 184/241 (76%), Gaps = 2/241 (0%) Query: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 84 V S+I + FD++L HRND AC+ KGFY+Y+AFV AA +F GFG TG T+ RKR+VAAFL Sbjct: 2 VGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAFL 61 Query: 85 AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSH 144 AQTSHETTGG A +PDG +AWGYCF ER + YC P PC GK YYGRGPIQL+H Sbjct: 62 AQTSHETTGGAAGSPDGPYAWGYCFVTERDKSNKYCDPGT--PCPAGKSYYGRGPIQLTH 119 Query: 145 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGA 204 NYNY AGRA+GVDL+ NPDLVA D +SFKTA+WFWMT Q KPS H VIT +W+PS A Sbjct: 120 NYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSAA 179 Query: 205 DRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRP 264 D AA R PGFGVITNIINGG+ECG G DRIGFYKRYCD+L + YG NL+C +QRP Sbjct: 180 DVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNCRDQRP 239 Query: 265 F 265 F Sbjct: 240 F 240 >2Z38-A nrPDB Length = 247 Score = 325 bits (833), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 149/244 (61%), Positives = 183/244 (75%), Gaps = 1/244 (0%) Query: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAA 82 G +S IIS QF +ML H ND C A GF+TYDAF+ AA +FP FG TG RK+++AA Sbjct: 3 GDLSGIISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAA 62 Query: 83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYC-TPSAQWPCAPGKRYYGRGPIQ 141 F QTSHETTGGW+ APDGA WGYC+K+E + +C + + +WPCAPGK YYGRGP+ Sbjct: 63 FFGQTSHETTGGWSGAPDGANTWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMM 122 Query: 142 LSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSP 201 LS NYNYGP GR +G++LL+NPD+ ++DP ++FKTA+WFWMT QAPKPS H VIT +W P Sbjct: 123 LSWNYNYGPCGRDLGLELLKNPDVASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEP 182 Query: 202 SGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYN 261 S AD +AGR PG+GVITNIINGGLEC ++V DRI FY RYC + GV G N+DC N Sbjct: 183 SAADISAGRLPGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDCDN 242 Query: 262 QRPF 265 QRPF Sbjct: 243 QRPF 246 >3HBH-A nrPDB Length = 204 Score = 192 bits (489), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 103/236 (43%), Positives = 132/236 (55%), Gaps = 32/236 (13%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 SV IIS + F+ L +C+ KGFYTY+AF+AAANA+ GFG TGS D +KR++AAF Sbjct: 1 SVGGIISQSFFNG-LAGGAASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAF 59 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 A HET G C+ E+ +YC S+ WPC GK Y+GRGP+QLS Sbjct: 60 FANVMHETGG-------------LCYINEKNPPINYCQSSSTWPCTSGKSYHGRGPLQLS 106 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 NYNYG AG++IG D L NP+ V D T+SFKTA+WFWM + H+ IT Sbjct: 107 WNYNYGAAGKSIGFDGLNNPEKVGQDSTISFKTAVWFWM----KNSNCHSAIT------- 155 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 GFG IN +EC G V+ R+ +YK+ C LGV G N+ C Sbjct: 156 ------SGQGFGGTIKAIN-SMECNGGNSGEVSSRVNYYKKICSQLGVDPGANVSC 204 >5H7T-A nrPDB Length = 212 Score = 186 bits (472), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 101/236 (42%), Positives = 133/236 (56%), Gaps = 33/236 (13%) Query: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 84 V SI+S F+ ++ G C GFYTYD+F++AANAF GFG +GS+D KR++AAF Sbjct: 9 VGSIVSSDVFNSIVGGAASG-CAGNGFYTYDSFISAANAFNGFGTSGSSDVNKREIAAFF 67 Query: 85 AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPS-AQWPCAPGKRYYGRGPIQLS 143 A +HET G +C+ +E+ + YC S Q+PCA GK Y+GRGP+QLS Sbjct: 68 ANAAHETGG-------------FCYIEEQNPTSIYCDASNTQYPCASGKTYHGRGPLQLS 114 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 NYNYG AG I D L NP++V TD T+SFKTA+WFWM + H IT Sbjct: 115 WNYNYGAAGSYIQFDGLNNPEIVGTDSTISFKTAVWFWMV----NSNCHTAIT------- 163 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 GFG IN +EC G + VA R+ +Y+++C L V G NL C Sbjct: 164 ------SGQGFGATIRAIN-SMECDGGNAATVASRVNYYQKFCQQLNVDTGSNLQC 212 >4IJ4-A nrPDB Length = 205 Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 105/241 (43%), Positives = 136/241 (56%), Gaps = 42/241 (17%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 S +S ++ A F+ +RN FYTYD V+A+N +P FG TGS D +KR++AAF Sbjct: 2 SWTSFVTPAVFEGWFPNRNP-------FYTYDGLVSASNGYPEFGTTGSLDDQKRELAAF 54 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYC-TPSAQWPCAPGKRYYGRGPIQL 142 L + + G F QE+ +DYC T S Q+PCA GK+YYGRGPIQL Sbjct: 55 LGNINQASGG-------------LQFIQEQNPQSDYCDTSSTQYPCAAGKQYYGRGPIQL 101 Query: 143 SHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPS 202 S NYNYG AG +G+DLL NPDLVA D TV+++TALWFWM K H IT SP Sbjct: 102 SWNYNYGEAGADLGLDLLNNPDLVAQDSTVAWRTALWFWM-----KRDCHGAITA--SP- 153 Query: 203 GADRAAGRAPGFGVITNIINGGLEC----GHGQDSRVADRIGFYKRYCDILGVGYGDNLD 258 P F IINGGLEC G + ++ +R+ +Y ++C LGV G +L Sbjct: 154 ---------PSFSGTIRIINGGLECNQPAGSIGNMQMENRVTYYTQFCQTLGVDPGTDLR 204 Query: 259 C 259 C Sbjct: 205 C 205 >2CJL-A nrPDB Length = 204 Score = 163 bits (412), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 96/233 (41%), Positives = 119/233 (51%), Gaps = 31/233 (13%) Query: 28 IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87 ++S AQFD+M RN FYTY AA +A+PGF TGS +K++ AAFLA Sbjct: 2 VVSEAQFDQMFPSRNS-------FYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANV 54 Query: 88 SHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGK-RYYGRGPIQLSHNY 146 HET G Y +Q YC S + C G +YYGRGP+QLS N+ Sbjct: 55 GHETGG-----------LVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNF 103 Query: 147 NYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADR 206 NY AG A+G+DLL NPDLV D V++KT LW+W T P G +P Sbjct: 104 NYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWNTQTGP---------GTMTPH---D 151 Query: 207 AAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 A GFG ING LEC G +V RI Y+R+ +LGV G NL C Sbjct: 152 AMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC 204 >4MCK-A nrPDB Length = 201 Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 36/232 (15%) Query: 28 IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87 ++S A F+ + G C+ K FYT AF++A NA+PGF G+ KR++AAF A Sbjct: 6 VVSDAFFNGIKNQAGSG-CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHV 64 Query: 88 SHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYN 147 +H+T +C+ E + YC S +WPCA G++YYGRGP+Q+S NYN Sbjct: 65 THQTGH-------------FCYISEINKSNAYCDASNRWPCAAGQKYYGRGPLQISWNYN 111 Query: 148 YGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRA 207 YGPAGR IG + L +P+ VA D ++FKTALWFWM + H ++ Sbjct: 112 YGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMN------NVHRLMP----------- 154 Query: 208 AGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 GFG IN GLEC +++ R+G+YK+YC L V G NL C Sbjct: 155 ----QGFGATIRAIN-GLECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 201 >1WVU-A nrPDB Length = 265 Score = 153 bits (386), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 90/233 (38%), Positives = 119/233 (51%), Gaps = 31/233 (13%) Query: 28 IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87 ++S AQF++M +RN FYTY A +A+P F TGS + +KR+ AAFLA Sbjct: 63 VVSEAQFNQMFPNRN-------AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANV 115 Query: 88 SHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKR-YYGRGPIQLSHNY 146 SHET G + Y + YC + + C G+ YYGRGPIQLS N+ Sbjct: 116 SHETGGLF-----------YIKEVNEANYPHYCDTTQSYGCPAGQAAYYGRGPIQLSWNF 164 Query: 147 NYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADR 206 NY AG A+G++LL NP LV DP V++KT LW+W + P G +P Sbjct: 165 NYKAAGDALGINLLANPYLVEQDPAVAWKTGLWYWNSQNGP---------GTMTP---HN 212 Query: 207 AAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 A GFG ING LEC G ++V RI + ++ ILG G NL C Sbjct: 213 AIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILGTTTGPNLSC 265 >4OK7-A nrPDB Length = 223 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 31/132 (23%) Query: 79 DVAAFLAQTSHETTG----------------GWATA----PDGAFAWGYC-------FKQ 111 D A F+AQ HE+ G G+ A PD A A G ++ Sbjct: 53 DQAMFIAQVGHESGGFTRLQENFNYSVNGLSGFIRAGRITPDQANALGRKTYEKSLPLER 112 Query: 112 ERGAAADYCTPSAQWPCAPGK--RYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATD 169 +R A A+ PG Y GRG IQ++ NY G + VDL+ P+L+A D Sbjct: 113 QR-AIANLVYSKRMGNNGPGDGWNYRGRGLIQITGLNNYRDCGNGLKVDLVAQPELLAQD 171 Query: 170 PTVSFKTALWFW 181 + ++A WF+ Sbjct: 172 EYAA-RSAAWFF 182 >3EDF-A nrPDB Length = 601 Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 29/148 (19%) Query: 72 STDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQW----P 127 ++ + RD A++ + GGWA AF+ Q+R AA D A W P Sbjct: 458 TSTVKGRDDASY----RRDFPGGWAGDKANAFSGAGLTSQQR-AAQDLVRKLANWRKNQP 512 Query: 128 CAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAP 187 R GP + + Y + I V + N D T PT F+ L Sbjct: 513 VIHNGRLMHFGPEENTWVYFRYNKDKRIMV-AMNNNDKPMTLPTARFQEML--------- 562 Query: 188 KPSSHAVITGKWSPSGADRAAGRAPGFG 215 K +PSG D +G+ G G Sbjct: 563 ----------KGAPSGVDFLSGKTVGLG 580 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3CQL-A nrPDB 397 e-111 4DYG-A nrPDB 393 e-110 4MST-A nrPDB 389 e-109 4TX7-A nrPDB 385 e-107 2Z38-A nrPDB 380 e-106 2BAA-A nrPDB 374 e-104 1DXJ-A nrPDB 369 e-103 3W3E-A nrPDB 367 e-102 3IWR-A nrPDB 357 3e-99 3HBH-A nrPDB 259 8e-70 2CJL-A nrPDB 256 1e-68 4IJ4-A nrPDB 254 3e-68 5H7T-A nrPDB 250 5e-67 4MCK-A nrPDB 250 6e-67 1WVU-A nrPDB 244 3e-65 4OK7-A nrPDB 99 2e-21 Sequences not found previously or not previously below threshold: 1X8H-A nrPDB 29 2.0 5H0I-A nrPDB 28 3.6 3KTN-A nrPDB 28 4.2 2IDA-A nrPDB 27 7.9 4QR8-A nrPDB 27 10.0 CONVERGED! >3CQL-A nrPDB Length = 243 Score = 397 bits (1019), Expect = e-111, Method: Composition-based stats. Identities = 176/242 (72%), Positives = 202/242 (83%) Query: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 84 + IIS + FD+ML HRN+ AC AKGFYTYDAF+AAA +FP FG TGSTD RKR++AAFL Sbjct: 2 IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFPSFGTTGSTDVRKREIAAFL 61 Query: 85 AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSH 144 QTSHETTGGW +APDG +AWGYCF +ER +++YC PS ++PCAPGK YYGRGPIQLS Sbjct: 62 GQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPIQLSW 121 Query: 145 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGA 204 NYNYGP G A+ V+LL NPDLVATD +SFKTALWFWMT QAPKPS H VITG+W PS A Sbjct: 122 NYNYGPCGEALRVNLLGNPDLVATDRVISFKTALWFWMTPQAPKPSCHDVITGRWQPSAA 181 Query: 205 DRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRP 264 D AAGR PG+GVITNIINGGLECG G + +VADRIGF++RYC ILGVG G+NLDCYNQRP Sbjct: 182 DTAAGRLPGYGVITNIINGGLECGKGPNPQVADRIGFFRRYCGILGVGTGNNLDCYNQRP 241 Query: 265 FA 266 F Sbjct: 242 FG 243 >4DYG-A nrPDB Length = 244 Score = 393 bits (1009), Expect = e-110, Method: Composition-based stats. Identities = 243/243 (100%), Positives = 243/243 (100%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF Sbjct: 2 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 61 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS Sbjct: 62 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 121 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG Sbjct: 122 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 181 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 263 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR Sbjct: 182 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 241 Query: 264 PFA 266 PFA Sbjct: 242 PFA 244 >4MST-A nrPDB Length = 242 Score = 389 bits (1000), Expect = e-109, Method: Composition-based stats. Identities = 171/240 (71%), Positives = 195/240 (81%) Query: 27 SIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQ 86 SIIS + F+ ML HRND AC AKGFYTYDAF++AA AFP FG TG D KR++AAF Q Sbjct: 1 SIISRSTFEEMLKHRNDAACPAKGFYTYDAFISAAKAFPAFGTTGDVDTCKREIAAFFGQ 60 Query: 87 TSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNY 146 TSH TTGGW TAPDG +AWGYC+K+E A+ YC+PS +PCAPGK+YYGRGPIQLS NY Sbjct: 61 TSHATTGGWPTAPDGPYAWGYCYKEELNQASSYCSPSPAYPCAPGKKYYGRGPIQLSWNY 120 Query: 147 NYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADR 206 NYG G+A+G+DLL NPDLVATD +SFK A+WFWMT Q PKPS H VITG+WSP+G D Sbjct: 121 NYGQCGQALGLDLLNNPDLVATDRVISFKAAIWFWMTPQFPKPSCHDVITGQWSPTGHDI 180 Query: 207 AAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRPFA 266 +AGRAPG+GVITNIINGGLECG G D+RV DRIGFYKRYCD+ VGYG NLDCYNQ PF Sbjct: 181 SAGRAPGYGVITNIINGGLECGRGWDARVEDRIGFYKRYCDMFAVGYGSNLDCYNQTPFG 240 >4TX7-A nrPDB Length = 245 Score = 385 bits (989), Expect = e-107, Method: Composition-based stats. Identities = 172/246 (69%), Positives = 205/246 (83%), Gaps = 1/246 (0%) Query: 21 AHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDV 80 A +S++I A FD+ML HRNDGAC A+GFYTYDAF+AAA AFP FG TG T RKR++ Sbjct: 1 APSDLSALIPRATFDQMLKHRNDGACPARGFYTYDAFIAAARAFPSFGNTGDTATRKREI 60 Query: 81 AAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPI 140 AAFL QTSHETTGGW +APDG +AWGYCF +E+ +A YC+P+ Q+PCA G++YYGRGPI Sbjct: 61 AAFLGQTSHETTGGWPSAPDGPYAWGYCFVREQNPSA-YCSPTPQFPCASGQQYYGRGPI 119 Query: 141 QLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWS 200 Q+S NYNYG G AIGVDL+ NPDLVATDP VSFK+A+WFWMT Q+PKPSSH VIT +W+ Sbjct: 120 QISWNYNYGQCGNAIGVDLINNPDLVATDPVVSFKSAIWFWMTPQSPKPSSHDVITSQWT 179 Query: 201 PSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCY 260 PS AD AAG+ PG+G +TNIINGGLECG GQDSRV DRIGF+K+YCD+ GVGYG+NLDCY Sbjct: 180 PSAADVAAGKLPGYGTVTNIINGGLECGRGQDSRVEDRIGFFKQYCDLFGVGYGNNLDCY 239 Query: 261 NQRPFA 266 +Q PF Sbjct: 240 SQAPFG 245 >2Z38-A nrPDB Length = 247 Score = 380 bits (976), Expect = e-106, Method: Composition-based stats. Identities = 149/244 (61%), Positives = 182/244 (74%), Gaps = 1/244 (0%) Query: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAA 82 G +S IIS QF +ML H ND C A GF+TYDAF+ AA +FP FG TG RK+++AA Sbjct: 3 GDLSGIISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFPSFGNTGDLAMRKKEIAA 62 Query: 83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSA-QWPCAPGKRYYGRGPIQ 141 F QTSHETTGGW+ APDGA WGYC+K+E + +C + +WPCAPGK YYGRGP+ Sbjct: 63 FFGQTSHETTGGWSGAPDGANTWGYCYKEEIDKSDPHCDSNNLEWPCAPGKFYYGRGPMM 122 Query: 142 LSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSP 201 LS NYNYGP GR +G++LL+NPD+ ++DP ++FKTA+WFWMT QAPKPS H VIT +W P Sbjct: 123 LSWNYNYGPCGRDLGLELLKNPDVASSDPVIAFKTAIWFWMTPQAPKPSCHDVITDQWEP 182 Query: 202 SGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYN 261 S AD +AGR PG+GVITNIINGGLEC ++V DRI FY RYC + GV G N+DC N Sbjct: 183 SAADISAGRLPGYGVITNIINGGLECAGRDVAKVQDRISFYTRYCGMFGVDPGSNIDCDN 242 Query: 262 QRPF 265 QRPF Sbjct: 243 QRPF 246 >2BAA-A nrPDB Length = 243 Score = 374 bits (961), Expect = e-104, Method: Composition-based stats. Identities = 223/243 (91%), Positives = 233/243 (95%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 SVSSI+S AQFDRMLLHRNDGACQAKGFYTYDAFVAAA AFPGFG TGS DA+KR+VAAF Sbjct: 1 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAF 60 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 LAQTSHETTGGWATAPDGAFAWGYCFKQERGA++DYCTPSAQWPCAPGKRYYGRGPIQLS Sbjct: 61 LAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLS 120 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 HNYNYGPAGRAIGVDLL NPDLVATD TV FKTA+WFWMTAQ PKPSSHAVI G+WSPSG Sbjct: 121 HNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSG 180 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 263 ADRAAGR PGFGVITNIINGG+ECGHGQDSRVADRIGFYKRYCDILGVGYG+NLDCY+QR Sbjct: 181 ADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQR 240 Query: 264 PFA 266 PFA Sbjct: 241 PFA 243 >1DXJ-A nrPDB Length = 242 Score = 369 bits (947), Expect = e-103, Method: Composition-based stats. Identities = 159/243 (65%), Positives = 184/243 (75%), Gaps = 2/243 (0%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 V S+I + FD++L HRND AC+ KGFY+Y+AFV AA +F GFG TG T+ RKR+VAAF Sbjct: 1 DVGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFGGFGTTGDTNTRKREVAAF 60 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 LAQTSHETTGG A +PDG +AWGYCF ER + YC P PC GK YYGRGPIQL+ Sbjct: 61 LAQTSHETTGGAAGSPDGPYAWGYCFVTERDKSNKYCDPGT--PCPAGKSYYGRGPIQLT 118 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 HNYNY AGRA+GVDL+ NPDLVA D +SFKTA+WFWMT Q KPS H VIT +W+PS Sbjct: 119 HNYNYAQAGRALGVDLINNPDLVARDAVISFKTAIWFWMTPQGNKPSCHDVITNRWTPSA 178 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQR 263 AD AA R PGFGVITNIINGG+ECG G DRIGFYKRYCD+L + YG NL+C +QR Sbjct: 179 ADVAANRTPGFGVITNIINGGIECGRGPSPASGDRIGFYKRYCDVLHLSYGPNLNCRDQR 238 Query: 264 PFA 266 PF Sbjct: 239 PFG 241 >3W3E-A nrPDB Length = 242 Score = 367 bits (943), Expect = e-102, Method: Composition-based stats. Identities = 161/244 (65%), Positives = 186/244 (76%), Gaps = 2/244 (0%) Query: 23 GSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAA 82 V S+I + FD++L HRND AC+ KGFY+Y+AF+ AA +F FG TG ++ RKR+VAA Sbjct: 1 AEVGSVIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFAAFGTTGDSNTRKREVAA 60 Query: 83 FLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQL 142 FLAQTSHETTGG AT+PDG +AWGYCF ER + YC S PC+ GK YYGRGPIQL Sbjct: 61 FLAQTSHETTGGAATSPDGPYAWGYCFVTERDKSNRYCDGS--GPCSAGKSYYGRGPIQL 118 Query: 143 SHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPS 202 +HNYNY AGRA+GVDL+ NPDLVA D VSFKTALWFWMT Q KPS H VIT +W+PS Sbjct: 119 THNYNYNAAGRALGVDLINNPDLVARDAVVSFKTALWFWMTPQGNKPSCHDVITNRWTPS 178 Query: 203 GADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQ 262 AD+AA R PGFGVITNIINGGLECG G DRIGFYKRYCD+ GV YG NL+C +Q Sbjct: 179 AADKAANRVPGFGVITNIINGGLECGKGPTPASGDRIGFYKRYCDVFGVSYGPNLNCRDQ 238 Query: 263 RPFA 266 RPF Sbjct: 239 RPFG 242 >3IWR-A nrPDB Length = 309 Score = 357 bits (916), Expect = 3e-99, Method: Composition-based stats. Identities = 184/241 (76%), Positives = 207/241 (85%) Query: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 84 V SI+ F+R+LLHRNDGAC A+GFYTY+AF+AAA AFP FG TG+T+ RKR+VAAFL Sbjct: 58 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFL 117 Query: 85 AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSH 144 QTSHETTGGW TAPDG F+WGYCFKQE+ +DYC PS +WPCAPG++YYGRGPIQLS Sbjct: 118 GQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSF 177 Query: 145 NYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGA 204 N+NYGPAGRAIGVDLL NPDLVATD TVSFKTALWFWMT Q KPSSH VITG+W+PS A Sbjct: 178 NFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPA 237 Query: 205 DRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDCYNQRP 264 D AAGRAPG+GVITNI+NGGLECGHG D RVA+RIGFY+RYC G+G G NLDCYNQRP Sbjct: 238 DAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRP 297 Query: 265 F 265 F Sbjct: 298 F 298 >3HBH-A nrPDB Length = 204 Score = 259 bits (662), Expect = 8e-70, Method: Composition-based stats. Identities = 103/236 (43%), Positives = 132/236 (55%), Gaps = 32/236 (13%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 SV IIS + F+ L +C+ KGFYTY+AF+AAANA+ GFG TGS D +KR++AAF Sbjct: 1 SVGGIISQSFFNG-LAGGAASSCEGKGFYTYNAFIAAANAYSGFGTTGSNDVKKRELAAF 59 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLS 143 A HET G C+ E+ +YC S+ WPC GK Y+GRGP+QLS Sbjct: 60 FANVMHETGG-------------LCYINEKNPPINYCQSSSTWPCTSGKSYHGRGPLQLS 106 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 NYNYG AG++IG D L NP+ V D T+SFKTA+WFWM + H+ IT Sbjct: 107 WNYNYGAAGKSIGFDGLNNPEKVGQDSTISFKTAVWFWM----KNSNCHSAIT------- 155 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 GFG IN +EC G V+ R+ +YK+ C LGV G N+ C Sbjct: 156 ------SGQGFGGTIKAIN-SMECNGGNSGEVSSRVNYYKKICSQLGVDPGANVSC 204 >2CJL-A nrPDB Length = 204 Score = 256 bits (653), Expect = 1e-68, Method: Composition-based stats. Identities = 96/233 (41%), Positives = 119/233 (51%), Gaps = 31/233 (13%) Query: 28 IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87 ++S AQFD+M RN FYTY AA +A+PGF TGS +K++ AAFLA Sbjct: 2 VVSEAQFDQMFPSRNS-------FYTYSGLTAALSAYPGFSNTGSDTVKKQEAAAFLANV 54 Query: 88 SHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPG-KRYYGRGPIQLSHNY 146 HET G Y +Q YC S + C G +YYGRGP+QLS N+ Sbjct: 55 GHETGG-----------LVYVVEQNTANYPHYCDASQPYGCPAGNDKYYGRGPVQLSWNF 103 Query: 147 NYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADR 206 NY AG A+G+DLL NPDLV D V++KT LW+W T P G +P Sbjct: 104 NYKAAGDALGIDLLNNPDLVQNDSAVAWKTGLWYWNTQTGP---------GTMTP---HD 151 Query: 207 AAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 A GFG ING LEC G +V RI Y+R+ +LGV G NL C Sbjct: 152 AMVNGAGFGETIRSINGSLECDGGNPGQVQSRIDNYERFTQLLGVEPGGNLSC 204 >4IJ4-A nrPDB Length = 205 Score = 254 bits (649), Expect = 3e-68, Method: Composition-based stats. Identities = 102/241 (42%), Positives = 133/241 (55%), Gaps = 42/241 (17%) Query: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAF 83 S +S ++ A F+ +RN FYTYD V+A+N +P FG TGS D +KR++AAF Sbjct: 2 SWTSFVTPAVFEGWFPNRNP-------FYTYDGLVSASNGYPEFGTTGSLDDQKRELAAF 54 Query: 84 LAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCT-PSAQWPCAPGKRYYGRGPIQL 142 L + + G F QE+ +DYC S Q+PCA GK+YYGRGPIQL Sbjct: 55 LGNINQASGG-------------LQFIQEQNPQSDYCDTSSTQYPCAAGKQYYGRGPIQL 101 Query: 143 SHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPS 202 S NYNYG AG +G+DLL NPDLVA D TV+++TALWFWM K H IT Sbjct: 102 SWNYNYGEAGADLGLDLLNNPDLVAQDSTVAWRTALWFWM-----KRDCHGAITA----- 151 Query: 203 GADRAAGRAPGFGVITNIINGGLEC----GHGQDSRVADRIGFYKRYCDILGVGYGDNLD 258 P F IINGGLEC G + ++ +R+ +Y ++C LGV G +L Sbjct: 152 -------SPPSFSGTIRIINGGLECNQPAGSIGNMQMENRVTYYTQFCQTLGVDPGTDLR 204 Query: 259 C 259 C Sbjct: 205 C 205 >5H7T-A nrPDB Length = 212 Score = 250 bits (638), Expect = 5e-67, Method: Composition-based stats. Identities = 101/236 (42%), Positives = 133/236 (56%), Gaps = 33/236 (13%) Query: 25 VSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFL 84 V SI+S F+ ++ G C GFYTYD+F++AANAF GFG +GS+D KR++AAF Sbjct: 9 VGSIVSSDVFNSIVGGAASG-CAGNGFYTYDSFISAANAFNGFGTSGSSDVNKREIAAFF 67 Query: 85 AQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPS-AQWPCAPGKRYYGRGPIQLS 143 A +HET G +C+ +E+ + YC S Q+PCA GK Y+GRGP+QLS Sbjct: 68 ANAAHETGG-------------FCYIEEQNPTSIYCDASNTQYPCASGKTYHGRGPLQLS 114 Query: 144 HNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSG 203 NYNYG AG I D L NP++V TD T+SFKTA+WFWM + H IT Sbjct: 115 WNYNYGAAGSYIQFDGLNNPEIVGTDSTISFKTAVWFWMV----NSNCHTAIT------- 163 Query: 204 ADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 GFG IN +EC G + VA R+ +Y+++C L V G NL C Sbjct: 164 ------SGQGFGATIRAIN-SMECDGGNAATVASRVNYYQKFCQQLNVDTGSNLQC 212 >4MCK-A nrPDB Length = 201 Score = 250 bits (637), Expect = 6e-67, Method: Composition-based stats. Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 36/232 (15%) Query: 28 IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87 ++S A F+ + G C+ K FYT AF++A NA+PGF G+ KR++AAF A Sbjct: 6 VVSDAFFNGIKNQAGSG-CEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHV 64 Query: 88 SHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYN 147 +H+T +C+ E + YC S +WPCA G++YYGRGP+Q+S NYN Sbjct: 65 THQTGH-------------FCYISEINKSNAYCDASNRWPCAAGQKYYGRGPLQISWNYN 111 Query: 148 YGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRA 207 YGPAGR IG + L +P+ VA D ++FKTALWFWM + H ++ Sbjct: 112 YGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMN------NVHRLMP----------- 154 Query: 208 AGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 GFG ING LEC +++ R+G+YK+YC L V G NL C Sbjct: 155 ----QGFGATIRAING-LECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLTC 201 >1WVU-A nrPDB Length = 265 Score = 244 bits (623), Expect = 3e-65, Method: Composition-based stats. Identities = 90/233 (38%), Positives = 119/233 (51%), Gaps = 31/233 (13%) Query: 28 IISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQT 87 ++S AQF++M +RN FYTY A +A+P F TGS + +KR+ AAFLA Sbjct: 63 VVSEAQFNQMFPNRN-------AFYTYKGLTDALSAYPAFAKTGSDEVKKREAAAFLANV 115 Query: 88 SHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKR-YYGRGPIQLSHNY 146 SHET G + Y + YC + + C G+ YYGRGPIQLS N+ Sbjct: 116 SHETGGLF-----------YIKEVNEANYPHYCDTTQSYGCPAGQAAYYGRGPIQLSWNF 164 Query: 147 NYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADR 206 NY AG A+G++LL NP LV DP V++KT LW+W + P G +P Sbjct: 165 NYKAAGDALGINLLANPYLVEQDPAVAWKTGLWYWNSQNGP---------GTMTP---HN 212 Query: 207 AAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259 A GFG ING LEC G ++V RI + ++ ILG G NL C Sbjct: 213 AIVNNAGFGETIRSINGALECNGGNPAQVQSRINKFTQFTQILGTTTGPNLSC 265 >4OK7-A nrPDB Length = 223 Score = 99.0 bits (245), Expect = 2e-21, Method: Composition-based stats. Identities = 42/152 (27%), Positives = 60/152 (39%), Gaps = 31/152 (20%) Query: 60 AANAFPGFGATGST--DARKRDVAAFLAQTSHETTG----------------GWATA--- 98 AA FP + + D A F+AQ HE+ G G+ A Sbjct: 32 AARWFPHITTAMNEFGITKPDDQAMFIAQVGHESGGFTRLQENFNYSVNGLSGFIRAGRI 91 Query: 99 -PDGAFAWGYCF------KQERGAAADYCTPSAQWPCAPGK--RYYGRGPIQLSHNYNYG 149 PD A A G + + A A+ PG Y GRG IQ++ NY Sbjct: 92 TPDQANALGRKTYEKSLPLERQRAIANLVYSKRMGNNGPGDGWNYRGRGLIQITGLNNYR 151 Query: 150 PAGRAIGVDLLRNPDLVATDPTVSFKTALWFW 181 G + VDL+ P+L+A D + ++A WF+ Sbjct: 152 DCGNGLKVDLVAQPELLAQDEYAA-RSAAWFF 182 >1X8H-A nrPDB Length = 228 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 20/49 (40%) Query: 65 PGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQER 113 P G ++ V AF A +H G + PD +G C +E+ Sbjct: 123 PNVVHDGDFTLQEGKVRAFYAGPAHTPDGIFVYFPDEQVLYGGCILKEK 171 >5H0I-A nrPDB Length = 448 Score = 28.1 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 20/57 (35%) Query: 70 TGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQW 126 TG K +AA L S T G G + + + GAA PS + Sbjct: 106 TGEEVNAKNFLAAILGNKSAITGGSGKVVDSGPNDHIFIYYTDHGAAGVIGMPSKPY 162 >3KTN-A nrPDB Length = 346 Score = 28.1 bits (61), Expect = 4.2, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%) Query: 1 MRSLAVVVAVVATVAMAIGTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAA 60 +R L + V IG+ + I Q H++ Y ++AF+A Sbjct: 70 LRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAE 129 Query: 61 ANAFPGFGATGSTDARKRDVAAFLAQTSHE 90 + G + S + RD A LAQ +H Sbjct: 130 VDMVHICGISLSLTEKTRDAALILAQKAHA 159 >2IDA-A nrPDB Length = 102 Score = 27.0 bits (58), Expect = 7.9, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 9/24 (37%) Query: 89 HETTGGWATAPDGAFAWGYCFKQE 112 H T D WG+C+ E Sbjct: 59 HATGHPIIEGYDPPEGWGWCYVDE 82 >4QR8-A nrPDB Length = 443 Score = 27.0 bits (58), Expect = 10.0, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 16/86 (18%) Query: 175 KTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVIT---------------N 219 K LWF++ + + T W+ A +A G G + Sbjct: 77 KPKLWFYL-PVDYWHNVEPLPTSFWTEDVEVIALPKADGIGSLLPAARGNIGYIGPVPER 135 Query: 220 IINGGLECGHGQDSRVADRIGFYKRY 245 + G+E + V D + +Y+ + Sbjct: 136 ALQLGIEASNINPKGVIDYLHYYRSF 161 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.130 0.385 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,985,313 Number of Sequences: 36641 Number of extensions: 452762 Number of successful extensions: 1053 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 964 Number of HSP's gapped (non-prelim): 46 length of query: 266 length of database: 10,336,785 effective HSP length: 95 effective length of query: 171 effective length of database: 6,855,890 effective search space: 1172357190 effective search space used: 1172357190 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.0 bits)