BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9FI78 (433 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5KJS-A nrPDB 890 0.0 4G22-A nrPDB 725 0.0 5KJW-A nrPDB 721 0.0 4KE4-A nrPDB 555 e-159 5FAL-A nrPDB 555 e-158 6DD2-A nrPDB 554 e-158 2BGH-A nrPDB 132 3e-31 2E1U-A nrPDB 100 2e-21 2XR7-A nrPDB 81 7e-16 3B30-A nrPDB 52 4e-07 2ZBA-A nrPDB 51 9e-07 6D6K-A nrPDB 32 0.40 4EHU-A nrPDB 32 0.55 2OLW-A nrPDB 30 1.6 2OML-A nrPDB 30 1.8 4NBQ-A nrPDB 29 4.4 >5KJS-A nrPDB Length = 433 Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/433 (99%), Positives = 432/433 (99%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL Sbjct: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 Query: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE Sbjct: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 Query: 121 VDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 VDHS GIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP Sbjct: 121 VDHSTGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 Query: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA 240 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA Sbjct: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA 240 Query: 241 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN 300 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN Sbjct: 241 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN 300 Query: 301 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT 360 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT Sbjct: 301 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT 360 Query: 361 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 420 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS Sbjct: 361 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 420 Query: 421 EHMKLFEKFLFEI 433 EHMKLFEKFLFEI Sbjct: 421 EHMKLFEKFLFEI 433 >4G22-A nrPDB Length = 439 Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/434 (78%), Positives = 385/434 (88%), Gaps = 1/434 (0%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 MKI +++STMVRPA ETP NLWNSNVDLV+P FHTPSVYFYRPTG+SNFFD +V+K+AL Sbjct: 6 MKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDAL 65 Query: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 S+ALVPFYPMAGRLKRD+DGRIEI+CNG GVLFV A++ V+DDFGDFAPTL LR+LIP Sbjct: 66 SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPA 125 Query: 121 VDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 VD+S GI S+ LLVLQVT+FKCGG SLGVGM+HHAADGFSGLHFIN+WSDMARGLD+T+P Sbjct: 126 VDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLDVTLP 185 Query: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKI-PLDPSKSGPENTTVSIFKLTRDQLVALK 239 PFIDRTLLRARDPPQP F H+EYQP P++ + P + T VSIFKLTR+Q+ ALK Sbjct: 186 PFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALK 245 Query: 240 AKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFG 299 AKSKEDGNT+SYSSYEMLAGHVWR KARGL DQ TKLYIATDGR+RLRP LPPGYFG Sbjct: 246 AKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFG 305 Query: 300 NVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAH 359 NVIFTATP+A+AGDL KP WYAA +IHD L RMD++YLRSALDYLE+QPDL ALVRGAH Sbjct: 306 NVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAH 365 Query: 360 TYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQ 419 T+KCPNLGITSWVRLPI+DADFGWGRPIFMGPGGI YEGLSF+LPSPTNDGS+SVAI+LQ Sbjct: 366 TFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQ 425 Query: 420 SEHMKLFEKFLFEI 433 EHMKLF+ FL++I Sbjct: 426 GEHMKLFQSFLYDI 439 >5KJW-A nrPDB Length = 427 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/433 (78%), Positives = 379/433 (87%), Gaps = 6/433 (1%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 MKI++RDST+VRP+ TP +LWNSNVDLV+P FHTPSVYFYRP+GA NFFD VMK AL Sbjct: 1 MKIHVRDSTLVRPSAATPAVSLWNSNVDLVVPNFHTPSVYFYRPSGADNFFDTAVMKAAL 60 Query: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 +ALV FYPMAGRLKRD+DGR+EIDCN GVLFV A++ +DD+GDFAP+L LR+LIP Sbjct: 61 GRALVSFYPMAGRLKRDEDGRVEIDCNAEGVLFVEAESDGTVDDYGDFAPSLELRRLIPA 120 Query: 121 VDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 VD+S GI ++PLLVLQVTFFKCGG SLGVGMQHHAADGFSGLHFINTWSDMARGLD+T+P Sbjct: 121 VDYSQGISAYPLLVLQVTFFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDITLP 180 Query: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA 240 PFIDRTLL ARDPPQP F HVEYQP P+MK P T VSIFKLT+DQL LKA Sbjct: 181 PFIDRTLLSARDPPQPQFKHVEYQPPPAMKT------YEPAETVVSIFKLTKDQLTTLKA 234 Query: 241 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN 300 KSKEDGNT +YSSYEML+GHVWR ARGLP +QETKLYIATDGRSRL+PQLPPGYFGN Sbjct: 235 KSKEDGNTTTYSSYEMLSGHVWRCTCLARGLPEEQETKLYIATDGRSRLQPQLPPGYFGN 294 Query: 301 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT 360 VIFTATPLAVAGDL SKP WYAA +IHD L RMD++YLRSALD+LE+QPDL ALVRGAHT Sbjct: 295 VIFTATPLAVAGDLGSKPVWYAASKIHDALARMDNDYLRSALDFLELQPDLKALVRGAHT 354 Query: 361 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 420 ++CPNLGITSWVRLPI+DADFGWGRPIFMGPGGI YEGLSFVLPSPTNDGSLSVAI+LQ+ Sbjct: 355 FRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFVLPSPTNDGSLSVAISLQA 414 Query: 421 EHMKLFEKFLFEI 433 EHMKLFEK L++I Sbjct: 415 EHMKLFEKLLYQI 427 >4KE4-A nrPDB Length = 448 Score = 555 bits (1431), Expect = e-159, Method: Compositional matrix adjust. Identities = 280/450 (62%), Positives = 333/450 (74%), Gaps = 19/450 (4%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGA---------SNFF 51 MKI +R S MV PA ETP LWNS DLV+PRFHTPSVYF+R A +FF Sbjct: 1 MKITVRGSEMVYPAAETPRRRLWNSGPDLVVPRFHTPSVYFFRRRDADGNDLTAADGSFF 60 Query: 52 DPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTP-SVIDDFGDFAP 110 D M+ AL++ALVPFYPMAGRL RD+DGR+EIDCN AGVLF AD P + ID FGDFAP Sbjct: 61 DGARMRRALAEALVPFYPMAGRLARDEDGRVEIDCNAAGVLFQEADAPDATIDYFGDFAP 120 Query: 111 TLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSD 170 T+ L++LIP VD S +FPLLVLQVT FKCGG ++GVGMQHH ADGFSGLHFIN+W+D Sbjct: 121 TMELKRLIPTVDFSDDT-AFPLLVLQVTHFKCGGVAIGVGMQHHVADGFSGLHFINSWAD 179 Query: 171 MARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDP-----SKSGPENTTV 225 + RG+ + + PFIDR+LLRARDPP P + HVEYQPAP+M P +K V Sbjct: 180 LCRGVPIAVMPFIDRSLLRARDPPAPVYPHVEYQPAPAMLSSEPPQAALTAKPATPPAAV 239 Query: 226 SIFKLTRDQLVALKAK--SKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIAT 283 +IFKL+R +L L+++ ++E +S+Y +LA HVWR ARGLP DQ TKLY AT Sbjct: 240 AIFKLSRAELGRLRSQVPAREREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 299 Query: 284 DGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALD 343 DGR RL+P LP GYFGNVIFTATPLA AG + + A I L RMDD Y RSALD Sbjct: 300 DGRQRLQPPLPEGYFGNVIFTATPLANAGTVTAG-VAEGAAVIQAALDRMDDGYCRSALD 358 Query: 344 YLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVL 403 YLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVL Sbjct: 359 YLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVL 418 Query: 404 PSPTNDGSLSVAIALQSEHMKLFEKFLFEI 433 PS DGSLSVAI+LQ+EHM+ F K +++ Sbjct: 419 PSANRDGSLSVAISLQAEHMEKFRKLIYDF 448 >5FAL-A nrPDB Length = 448 Score = 555 bits (1431), Expect = e-158, Method: Compositional matrix adjust. Identities = 274/447 (61%), Positives = 331/447 (74%), Gaps = 15/447 (3%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYR---------PTGASNFF 51 MKI +R S MV PA ETP LWNS DLV+PRFHTPSVYF+R +FF Sbjct: 3 MKITVRGSEMVYPAAETPRRRLWNSGPDLVVPRFHTPSVYFFRRRDGEGNDLAAADGSFF 62 Query: 52 DPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTP-SVIDDFGDFAP 110 D M+ AL++ALVPFYPMAGRL RD+DGR+EIDCN GVLF AD P + +DDFGDFAP Sbjct: 63 DGARMRRALAEALVPFYPMAGRLARDEDGRVEIDCNAGGVLFQEADAPDATVDDFGDFAP 122 Query: 111 TLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSD 170 T+ L++LIP V+++ I +FPLLV+QVT FKCGG ++GVGMQHH ADGFSGLHFIN+W+D Sbjct: 123 TMELKRLIPTVEYTDDISAFPLLVVQVTHFKCGGVAIGVGMQHHVADGFSGLHFINSWAD 182 Query: 171 MARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSM--KIPLDPSKSGPEN--TTVS 226 + RG+ + P+IDR+LLRARDPP P + HVEYQPAP+M + P P + P V+ Sbjct: 183 LCRGVPFAVMPYIDRSLLRARDPPTPVYPHVEYQPAPAMLSEPPQAPLMAKPATPPAAVA 242 Query: 227 IFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGR 286 IF+L+R L L+++ S+Y +LA HVWR ARGLP DQ TKLY ATDGR Sbjct: 243 IFRLSRADLGRLRSQIPAREGVPRLSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGR 302 Query: 287 SRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLE 346 RL+P LP GYFGNVIFTATPLA AG + + A I L RMD+ Y RSALDYLE Sbjct: 303 QRLQPPLPEGYFGNVIFTATPLADAGTVTAG-VAEGAAVIQAALDRMDEGYCRSALDYLE 361 Query: 347 MQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSP 406 +QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS Sbjct: 362 LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA 421 Query: 407 TNDGSLSVAIALQSEHMKLFEKFLFEI 433 DGSLSVAI+LQ+EHM+ F KF+++ Sbjct: 422 NRDGSLSVAISLQAEHMEKFRKFIYDF 448 >6DD2-A nrPDB Length = 449 Score = 554 bits (1427), Expect = e-158, Method: Compositional matrix adjust. Identities = 272/449 (60%), Positives = 335/449 (74%), Gaps = 16/449 (3%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRP--TGASNFFDPQVMKE 58 M+IN+ TMVRPA TP LWNSNVDLVIPR HT SVYFYRP +G +F+ V++E Sbjct: 1 MEINVVRETMVRPAGATPQRVLWNSNVDLVIPRIHTASVYFYRPDPSGGEGYFEGGVLRE 60 Query: 59 ALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSV-IDDFG-DFAPTLNLRQ 116 AL+KALVPFYPMAGRLK+D++GR EI+CNG GVL V A + +D++ DFAP ++ ++ Sbjct: 61 ALAKALVPFYPMAGRLKKDENGRFEINCNGEGVLLVEAAAANASVDEYARDFAPDVSFQR 120 Query: 117 LIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLD 176 LIP VD++ I SFPLLVLQ+T FKCGGASLGVGM+HH ADG SG+ FINTW+ MARG D Sbjct: 121 LIPSVDYTQDIGSFPLLVLQITRFKCGGASLGVGMEHHVADGMSGITFINTWAAMARGED 180 Query: 177 LTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPL------------DPSKSGPENTT 224 I P+IDRTLLRA PP P F HVEY P P +K P Sbjct: 181 PKIVPYIDRTLLRANKPPIPKFPHVEYHPPPLLKHAAATNGHSNGKAKPQAGDDAPPRIA 240 Query: 225 VSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATD 284 V +FK T++QL ALK+++ ++ +YSSYEML+GH+WRS+ ARGL +DQETKLYIATD Sbjct: 241 VGLFKFTKEQLQALKSQATDEETNTTYSSYEMLSGHIWRSMCLARGLDDDQETKLYIATD 300 Query: 285 GRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDY 344 GR+R+ P LP YFGNVIFT TP+A+AGDL+S+P +YAA IHD + RM+D YLRSALDY Sbjct: 301 GRARVVPPLPKHYFGNVIFTCTPMALAGDLVSRPLYYAASVIHDAVSRMNDEYLRSALDY 360 Query: 345 LEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLP 404 LE+QPDL LVRGAHT++ PNLGITSW RLP+YDADFGWGRP+FMGP I +EGL +VLP Sbjct: 361 LELQPDLYKLVRGAHTFRSPNLGITSWSRLPVYDADFGWGRPVFMGPAVIAFEGLVYVLP 420 Query: 405 SPTNDGSLSVAIALQSEHMKLFEKFLFEI 433 S T DGSLS+++ LQ EHM FE+ + +I Sbjct: 421 SGTGDGSLSISLGLQPEHMPRFEQLIGQI 449 >2BGH-A nrPDB Length = 421 Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 111/418 (26%), Positives = 188/418 (44%), Gaps = 54/418 (12%) Query: 10 MVRPATETP--ITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDP----QVMKEALSKA 63 ++ P++ TP + S++D ++ H P + FY P + DP Q +K++LSK Sbjct: 12 LILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFY-PNPLDSNLDPAQTSQHLKQSLSKV 70 Query: 64 LVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDD-FGDFAPTLNLRQLIPEVD 122 L FYP+AGR+ + +DCN +GV FV A + + + L Q +P Sbjct: 71 LTHFYPLAGRINVNSS----VDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA 126 Query: 123 HSAG---IHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTI 179 + G ++ L ++++FF+CGG ++GV + H AD S F+N W+ RG + Sbjct: 127 YPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETEIV 186 Query: 180 PPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALK 239 P D L AR F V+ P+P + +P EN + F ++++ AL+ Sbjct: 187 LPNFD---LAARH-----FPPVDNTPSPEL-VP-------DENVVMKRFVFDKEKIGALR 230 Query: 240 AKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYI--ATDGRSRLRPQLPPGY 297 A++ ++S +++ ++W+ V + K + A + RSR+ P LP Sbjct: 231 AQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYA 290 Query: 298 FGNVIFTATPLAVAGDL-LSKPTWYAAGQIHDFLVRMDDNY----LRSALDYLEMQPDLS 352 GN+ AT L A D K G + L + +D++ L+ E++P Sbjct: 291 MGNI---ATLLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELEPQ-- 345 Query: 353 ALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDG 410 L TSW RL YD DFGWG+P+ P + ++ + + DG Sbjct: 346 -----------ELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDG 392 >2E1U-A nrPDB Length = 454 Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 105/428 (24%), Positives = 167/428 (39%), Gaps = 68/428 (15%) Query: 38 SVYFYR-PTGASNFFDPQV--MKEALSKALVPFYPMAGRL-------KRDDDGRIEIDCN 87 +++FY P S F + V +K +LS L FYP G+L K+ + +E D Sbjct: 44 NLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGD-- 101 Query: 88 GAGVLF---------VVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVT 138 V F + + P D F D P L E + PL +QVT Sbjct: 102 SVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILG------ESTRLSDCIKIPLFSVQVT 155 Query: 139 FFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARG-------LDLTIPPFIDRTLLRAR 191 F G ++G+ H D + F+ W+ +AR L P DR + Sbjct: 156 LFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDRII---- 211 Query: 192 DPPQPAFHHVEYQPAPSMKIPLD---PSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNT 248 P + A D S +GP + + F LTR + LK + T Sbjct: 212 --KYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPT 269 Query: 249 VSY-SSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATP 307 + Y SS+ + ++W + K+R ND+ D R+R++P +P YFGN + Sbjct: 270 LEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAA 326 Query: 308 LAVAGDLLSKPTWYAAGQI-----HDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYK 362 +A L+ K + A ++ H L D L+ D +E DL + G T Sbjct: 327 IAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLK---DDMESFNDLVS--EGMPT-- 379 Query: 363 CPNLGITSWV----RLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIAL 418 +WV +L YD DFGWG+P + I + G + ++ L + + + Sbjct: 380 -----TMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCI 434 Query: 419 QSEHMKLF 426 + M+ F Sbjct: 435 SATQMEDF 442 >2XR7-A nrPDB Length = 453 Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 96/405 (23%), Positives = 162/405 (40%), Gaps = 56/405 (13%) Query: 56 MKEALSKALVPFYPMAGRLK--RDDDGRIE---IDCNGAGVLFVVADT---------PSV 101 +K++LS L + P+AG + +D G E + N V+F +D P Sbjct: 60 LKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRN 119 Query: 102 IDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSG 161 DF F P L E + G+ P+L +QVT F G S+G H A DG + Sbjct: 120 TKDFYHFVPQL------AEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATI 173 Query: 162 LHFINTWSDMAR------GLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDP 215 + F+ W+ + + L PF DR++++ P + + + Sbjct: 174 VKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIK---DPNGVGMSIWNEMKKYKHMMKMS 230 Query: 216 SKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSY-SSYEMLAGHVWRSVGKARGLPND 274 P + F +TR + LK +++ +S+ + +VW + K+ + Sbjct: 231 DVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGE 290 Query: 275 QETK-----LYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDF 329 + + A D R++ P LPP YFGN + DL K + A ++ Sbjct: 291 EIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGE 350 Query: 330 LVR---MDDNYLRSA---LDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGW 383 +R D+ ++ S +Y ++ S V G+ +L +Y ADFGW Sbjct: 351 AIRKRMKDEEWILSGSWFKEYDKVDAKRSLSVAGSP-------------KLDLYAADFGW 397 Query: 384 GRPIFMGPGGIPY-EGLSFVL-PSPTNDGSLSVAIALQSEHMKLF 426 GRP + I +G+S L S +DG L + ++L M F Sbjct: 398 GRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAF 442 >3B30-A nrPDB Length = 451 Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 74/315 (23%), Positives = 119/315 (37%), Gaps = 37/315 (11%) Query: 131 PLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRA 190 P+++LQ+ F K GG L V QH A D I S R PF + + Sbjct: 135 PVILLQLNFIK-GGLILTVNGQHGAMDMVGQDAVIRLLSKACRN-----DPFTEEEMTAM 188 Query: 191 ---RDPPQPAFHHVEYQPAPSMKIPLDPSKSG-----PENTTVSIFKLTRDQLVALK--A 240 R P + P +I G P + + + F + + LK A Sbjct: 189 NLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMSELKDAA 248 Query: 241 KSKEDGNTVSYSSYEMLAGHVWRSVGKAR--GLPNDQETKLYIATDGRSRLR-PQLPPGY 297 D +T S+ + L+ +W+S + R + T+ A D R + PG Sbjct: 249 TKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMGVSNNYPGL 308 Query: 298 FGNVIF-TATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVR 356 N+ + +T +A + L ++ +R R YL PD S + Sbjct: 309 LQNMTYHNSTIGEIANESLGATASRLRSELDPASMR---QRTRGLATYLHNNPDKSNVSL 365 Query: 357 GAHTYKCPNLGITSWVRLPIYDADFGWG--------RPIFMGPGGIPYEGLSFVLPSPTN 408 A ++ ++SW ++ ++D DFG G RPIF P E L + +P Sbjct: 366 TADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFE-----PVESLMYFMPKKP- 419 Query: 409 DGSLSVAIALQSEHM 423 DG A++L+ E M Sbjct: 420 DGEFCAALSLRDEDM 434 >2ZBA-A nrPDB Length = 459 Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 73/315 (23%), Positives = 124/315 (39%), Gaps = 36/315 (11%) Query: 131 PLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRA 190 P+L+LQ+ F K GG L V QH A D I S R T L Sbjct: 144 PVLLLQLNFIK-GGLILTVNGQHGAMDMTGQDAIIRLLSKACRNESFTEEEISAMNL--D 200 Query: 191 RDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENT----TVSIFKLTRDQLVALK--AKSKE 244 R P + + P +I T + F T L LK A Sbjct: 201 RKTVVPLLENYKVGPELDHQIAKPAPAGDAPPAPAKATWAFFSFTPKALSELKDAATKTL 260 Query: 245 DGNTVSYSSYEMLAGHVWRSVGKAR--GLPNDQETKLYIATDGRSRLR-PQLPPGYFGNV 301 D ++ S+ + L+ +W+S + R L T+ A D R + PG N+ Sbjct: 261 DASSKFVSTDDALSAFIWQSTSRVRLARLDASTPTEFCRAVDMRGPMGVSSTYPGLLQNM 320 Query: 302 IFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLR----SALDYLEMQPDLSALVRG 357 + + +A ++ ++P A ++ ++ + LR + Y+ PD S++ Sbjct: 321 TYHDSTVA---EIANEPLGATASRLRS---ELNSDRLRRRTQALATYMHGLPDKSSVSLT 374 Query: 358 AHTYKCPNLGITSWVRLPIYDADFGWG--------RPIFMGPGGIPYEGLSFVLPSPTND 409 A ++ ++SW ++ ++ DFG+G RP F P+E L + +P D Sbjct: 375 ADANPSSSIMLSSWAKVGCWEYDFGFGLGKPESVRRPRFE-----PFESLMYFMPKKP-D 428 Query: 410 GSLSVAIALQSEHMK 424 G + +I+L+ E M+ Sbjct: 429 GEFTASISLRDEDME 443 >6D6K-A nrPDB Length = 705 Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 248 TVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATP 307 TV+Y + AG + GK G ++ ET + D +RP P GY+ + TAT Sbjct: 69 TVNYQEKQYAAGRIPGGYGKREGRASEAETLISRLID--RPIRPLFPEGYYNEIQVTATV 126 Query: 308 LA 309 ++ Sbjct: 127 VS 128 >4EHU-A nrPDB Length = 276 Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%) Query: 57 KEALSKALVPFYPMAGRLK-RDDDGRI-EIDCNGAGVLFVVADTPSVIDDFGDFAPTLNL 114 +E + K +V Y GR+ D D +I E+ C+ GV F++ +T ++ID G A L L Sbjct: 54 REDIKKVVVTGY---GRMNYSDADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKL 110 >2OLW-A nrPDB Length = 217 Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Query: 53 PQVMKEALSKALVPFYPM-----AGRLKRDDDGRIEIDCNGA 89 PQ EA K L F P+ AGRL RD +G + + NGA Sbjct: 52 PQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGA 93 >2OML-A nrPDB Length = 189 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Query: 53 PQVMKEALSKALVPFYPM-----AGRLKRDDDGRIEIDCNGA 89 PQ EA K L F P+ AGRL RD +G + + NGA Sbjct: 24 PQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGA 65 >4NBQ-A nrPDB Length = 715 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Query: 235 LVALKAKSK-EDGN-----TVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSR 288 LV++ AK + E+G TV+Y AG + K G P ++ET D Sbjct: 59 LVSVVAKKEAEEGRDFFPLTVNYQEKTYAAGKIPGGYFKREGRPTEKETLTSRLID--RP 116 Query: 289 LRPQLPPGYFGNVIFTATPLAV 310 LRP P G+ V AT L+V Sbjct: 117 LRPLFPKGFTNEVQVIATVLSV 138 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5KJS-A nrPDB 674 0.0 4G22-A nrPDB 656 0.0 5KJW-A nrPDB 650 0.0 5FAL-A nrPDB 610 e-175 4KE4-A nrPDB 600 e-172 6DD2-A nrPDB 590 e-169 2BGH-A nrPDB 389 e-108 2E1U-A nrPDB 369 e-102 2XR7-A nrPDB 360 e-100 3B30-A nrPDB 280 1e-75 2ZBA-A nrPDB 268 2e-72 Sequences not found previously or not previously below threshold: 1Q9J-A nrPDB 38 0.007 1XM9-A nrPDB 31 1.5 2JGP-A nrPDB 30 1.7 1Z4X-A nrPDB 30 2.1 2ORY-A nrPDB 29 2.9 1XAD-A nrPDB 29 3.5 CONVERGED! >5KJS-A nrPDB Length = 433 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 432/433 (99%), Positives = 432/433 (99%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL Sbjct: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 Query: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE Sbjct: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 Query: 121 VDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 VDHS GIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP Sbjct: 121 VDHSTGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 Query: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA 240 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA Sbjct: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA 240 Query: 241 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN 300 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN Sbjct: 241 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN 300 Query: 301 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT 360 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT Sbjct: 301 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT 360 Query: 361 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 420 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS Sbjct: 361 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 420 Query: 421 EHMKLFEKFLFEI 433 EHMKLFEKFLFEI Sbjct: 421 EHMKLFEKFLFEI 433 >4G22-A nrPDB Length = 439 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 340/434 (78%), Positives = 385/434 (88%), Gaps = 1/434 (0%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 MKI +++STMVRPA ETP NLWNSNVDLV+P FHTPSVYFYRPTG+SNFFD +V+K+AL Sbjct: 6 MKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDAL 65 Query: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 S+ALVPFYPMAGRLKRD+DGRIEI+CNG GVLFV A++ V+DDFGDFAPTL LR+LIP Sbjct: 66 SRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPA 125 Query: 121 VDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 VD+S GI S+ LLVLQVT+FKCGG SLGVGM+HHAADGFSGLHFIN+WSDMARGLD+T+P Sbjct: 126 VDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLDVTLP 185 Query: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKI-PLDPSKSGPENTTVSIFKLTRDQLVALK 239 PFIDRTLLRARDPPQP F H+EYQP P++ + P + T VSIFKLTR+Q+ ALK Sbjct: 186 PFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALK 245 Query: 240 AKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFG 299 AKSKEDGNT+SYSSYEMLAGHVWR KARGL DQ TKLYIATDGR+RLRP LPPGYFG Sbjct: 246 AKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFG 305 Query: 300 NVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAH 359 NVIFTATP+A+AGDL KP WYAA +IHD L RMD++YLRSALDYLE+QPDL ALVRGAH Sbjct: 306 NVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAH 365 Query: 360 TYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQ 419 T+KCPNLGITSWVRLPI+DADFGWGRPIFMGPGGI YEGLSF+LPSPTNDGS+SVAI+LQ Sbjct: 366 TFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQ 425 Query: 420 SEHMKLFEKFLFEI 433 EHMKLF+ FL++I Sbjct: 426 GEHMKLFQSFLYDI 439 >5KJW-A nrPDB Length = 427 Score = 650 bits (1676), Expect = 0.0, Method: Composition-based stats. Identities = 340/433 (78%), Positives = 379/433 (87%), Gaps = 6/433 (1%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEAL 60 MKI++RDST+VRP+ TP +LWNSNVDLV+P FHTPSVYFYRP+GA NFFD VMK AL Sbjct: 1 MKIHVRDSTLVRPSAATPAVSLWNSNVDLVVPNFHTPSVYFYRPSGADNFFDTAVMKAAL 60 Query: 61 SKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPE 120 +ALV FYPMAGRLKRD+DGR+EIDCN GVLFV A++ +DD+GDFAP+L LR+LIP Sbjct: 61 GRALVSFYPMAGRLKRDEDGRVEIDCNAEGVLFVEAESDGTVDDYGDFAPSLELRRLIPA 120 Query: 121 VDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIP 180 VD+S GI ++PLLVLQVTFFKCGG SLGVGMQHHAADGFSGLHFINTWSDMARGLD+T+P Sbjct: 121 VDYSQGISAYPLLVLQVTFFKCGGVSLGVGMQHHAADGFSGLHFINTWSDMARGLDITLP 180 Query: 181 PFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKA 240 PFIDRTLL ARDPPQP F HVEYQP P+MK P T VSIFKLT+DQL LKA Sbjct: 181 PFIDRTLLSARDPPQPQFKHVEYQPPPAMKT------YEPAETVVSIFKLTKDQLTTLKA 234 Query: 241 KSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGN 300 KSKEDGNT +YSSYEML+GHVWR ARGLP +QETKLYIATDGRSRL+PQLPPGYFGN Sbjct: 235 KSKEDGNTTTYSSYEMLSGHVWRCTCLARGLPEEQETKLYIATDGRSRLQPQLPPGYFGN 294 Query: 301 VIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHT 360 VIFTATPLAVAGDL SKP WYAA +IHD L RMD++YLRSALD+LE+QPDL ALVRGAHT Sbjct: 295 VIFTATPLAVAGDLGSKPVWYAASKIHDALARMDNDYLRSALDFLELQPDLKALVRGAHT 354 Query: 361 YKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQS 420 ++CPNLGITSWVRLPI+DADFGWGRPIFMGPGGI YEGLSFVLPSPTNDGSLSVAI+LQ+ Sbjct: 355 FRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFVLPSPTNDGSLSVAISLQA 414 Query: 421 EHMKLFEKFLFEI 433 EHMKLFEK L++I Sbjct: 415 EHMKLFEKLLYQI 427 >5FAL-A nrPDB Length = 448 Score = 610 bits (1572), Expect = e-175, Method: Composition-based stats. Identities = 274/447 (61%), Positives = 331/447 (74%), Gaps = 15/447 (3%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGA---------SNFF 51 MKI +R S MV PA ETP LWNS DLV+PRFHTPSVYF+R +FF Sbjct: 3 MKITVRGSEMVYPAAETPRRRLWNSGPDLVVPRFHTPSVYFFRRRDGEGNDLAAADGSFF 62 Query: 52 DPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTP-SVIDDFGDFAP 110 D M+ AL++ALVPFYPMAGRL RD+DGR+EIDCN GVLF AD P + +DDFGDFAP Sbjct: 63 DGARMRRALAEALVPFYPMAGRLARDEDGRVEIDCNAGGVLFQEADAPDATVDDFGDFAP 122 Query: 111 TLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSD 170 T+ L++LIP V+++ I +FPLLV+QVT FKCGG ++GVGMQHH ADGFSGLHFIN+W+D Sbjct: 123 TMELKRLIPTVEYTDDISAFPLLVVQVTHFKCGGVAIGVGMQHHVADGFSGLHFINSWAD 182 Query: 171 MARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSM--KIPLDPSKSGP--ENTTVS 226 + RG+ + P+IDR+LLRARDPP P + HVEYQPAP+M + P P + P V+ Sbjct: 183 LCRGVPFAVMPYIDRSLLRARDPPTPVYPHVEYQPAPAMLSEPPQAPLMAKPATPPAAVA 242 Query: 227 IFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGR 286 IF+L+R L L+++ S+Y +LA HVWR ARGLP DQ TKLY ATDGR Sbjct: 243 IFRLSRADLGRLRSQIPAREGVPRLSTYAVLAAHVWRCASLARGLPADQPTKLYCATDGR 302 Query: 287 SRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLE 346 RL+P LP GYFGNVIFTATPLA AG + + A I L RMD+ Y RSALDYLE Sbjct: 303 QRLQPPLPEGYFGNVIFTATPLADAGTVTAG-VAEGAAVIQAALDRMDEGYCRSALDYLE 361 Query: 347 MQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSP 406 +QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVLPS Sbjct: 362 LQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVLPSA 421 Query: 407 TNDGSLSVAIALQSEHMKLFEKFLFEI 433 DGSLSVAI+LQ+EHM+ F KF+++ Sbjct: 422 NRDGSLSVAISLQAEHMEKFRKFIYDF 448 >4KE4-A nrPDB Length = 448 Score = 600 bits (1546), Expect = e-172, Method: Composition-based stats. Identities = 280/450 (62%), Positives = 331/450 (73%), Gaps = 19/450 (4%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGAS---------NFF 51 MKI +R S MV PA ETP LWNS DLV+PRFHTPSVYF+R A +FF Sbjct: 1 MKITVRGSEMVYPAAETPRRRLWNSGPDLVVPRFHTPSVYFFRRRDADGNDLTAADGSFF 60 Query: 52 DPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTP-SVIDDFGDFAP 110 D M+ AL++ALVPFYPMAGRL RD+DGR+EIDCN AGVLF AD P + ID FGDFAP Sbjct: 61 DGARMRRALAEALVPFYPMAGRLARDEDGRVEIDCNAAGVLFQEADAPDATIDYFGDFAP 120 Query: 111 TLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSD 170 T+ L++LIP VD S +FPLLVLQVT FKCGG ++GVGMQHH ADGFSGLHFIN+W+D Sbjct: 121 TMELKRLIPTVDFSDDT-AFPLLVLQVTHFKCGGVAIGVGMQHHVADGFSGLHFINSWAD 179 Query: 171 MARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDP-----SKSGPENTTV 225 + RG+ + + PFIDR+LLRARDPP P + HVEYQPAP+M P +K V Sbjct: 180 LCRGVPIAVMPFIDRSLLRARDPPAPVYPHVEYQPAPAMLSSEPPQAALTAKPATPPAAV 239 Query: 226 SIFKLTRDQLVALKAKSK--EDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIAT 283 +IFKL+R +L L+++ E +S+Y +LA HVWR ARGLP DQ TKLY AT Sbjct: 240 AIFKLSRAELGRLRSQVPAREREGAPRFSTYAVLAAHVWRCASLARGLPADQPTKLYCAT 299 Query: 284 DGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALD 343 DGR RL+P LP GYFGNVIFTATPLA AG + + A I L RMDD Y RSALD Sbjct: 300 DGRQRLQPPLPEGYFGNVIFTATPLANAGTVTAG-VAEGAAVIQAALDRMDDGYCRSALD 358 Query: 344 YLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVL 403 YLE+QPDLSALVRGAHT++CPNLG+TSWVRLPI+DADFGWGRP+FMGPGGI YEGL+FVL Sbjct: 359 YLELQPDLSALVRGAHTFRCPNLGLTSWVRLPIHDADFGWGRPVFMGPGGIAYEGLAFVL 418 Query: 404 PSPTNDGSLSVAIALQSEHMKLFEKFLFEI 433 PS DGSLSVAI+LQ+EHM+ F K +++ Sbjct: 419 PSANRDGSLSVAISLQAEHMEKFRKLIYDF 448 >6DD2-A nrPDB Length = 449 Score = 590 bits (1522), Expect = e-169, Method: Composition-based stats. Identities = 272/449 (60%), Positives = 335/449 (74%), Gaps = 16/449 (3%) Query: 1 MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRP--TGASNFFDPQVMKE 58 M+IN+ TMVRPA TP LWNSNVDLVIPR HT SVYFYRP +G +F+ V++E Sbjct: 1 MEINVVRETMVRPAGATPQRVLWNSNVDLVIPRIHTASVYFYRPDPSGGEGYFEGGVLRE 60 Query: 59 ALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTP-SVIDDFG-DFAPTLNLRQ 116 AL+KALVPFYPMAGRLK+D++GR EI+CNG GVL V A + +D++ DFAP ++ ++ Sbjct: 61 ALAKALVPFYPMAGRLKKDENGRFEINCNGEGVLLVEAAAANASVDEYARDFAPDVSFQR 120 Query: 117 LIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLD 176 LIP VD++ I SFPLLVLQ+T FKCGGASLGVGM+HH ADG SG+ FINTW+ MARG D Sbjct: 121 LIPSVDYTQDIGSFPLLVLQITRFKCGGASLGVGMEHHVADGMSGITFINTWAAMARGED 180 Query: 177 LTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLD------------PSKSGPENTT 224 I P+IDRTLLRA PP P F HVEY P P +K P Sbjct: 181 PKIVPYIDRTLLRANKPPIPKFPHVEYHPPPLLKHAAATNGHSNGKAKPQAGDDAPPRIA 240 Query: 225 VSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATD 284 V +FK T++QL ALK+++ ++ +YSSYEML+GH+WRS+ ARGL +DQETKLYIATD Sbjct: 241 VGLFKFTKEQLQALKSQATDEETNTTYSSYEMLSGHIWRSMCLARGLDDDQETKLYIATD 300 Query: 285 GRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDY 344 GR+R+ P LP YFGNVIFT TP+A+AGDL+S+P +YAA IHD + RM+D YLRSALDY Sbjct: 301 GRARVVPPLPKHYFGNVIFTCTPMALAGDLVSRPLYYAASVIHDAVSRMNDEYLRSALDY 360 Query: 345 LEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLP 404 LE+QPDL LVRGAHT++ PNLGITSW RLP+YDADFGWGRP+FMGP I +EGL +VLP Sbjct: 361 LELQPDLYKLVRGAHTFRSPNLGITSWSRLPVYDADFGWGRPVFMGPAVIAFEGLVYVLP 420 Query: 405 SPTNDGSLSVAIALQSEHMKLFEKFLFEI 433 S T DGSLS+++ LQ EHM FE+ + +I Sbjct: 421 SGTGDGSLSISLGLQPEHMPRFEQLIGQI 449 >2BGH-A nrPDB Length = 421 Score = 389 bits (998), Expect = e-108, Method: Composition-based stats. Identities = 111/439 (25%), Positives = 193/439 (43%), Gaps = 55/439 (12%) Query: 2 KINIRDSTMVRPATETP--ITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDP----QV 55 ++ ++ P++ TP + S++D ++ H P + FY P + DP Q Sbjct: 4 QMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFY-PNPLDSNLDPAQTSQH 62 Query: 56 MKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDD-FGDFAPTLNL 114 +K++LSK L FYP+AGR+ + +DCN +GV FV A + + + L Sbjct: 63 LKQSLSKVLTHFYPLAGRINVNSS----VDCNDSGVPFVEARVQAQLSQAIQNVVELEKL 118 Query: 115 RQLIPEVDHSAG---IHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDM 171 Q +P + G ++ L ++++FF+CGG ++GV + H AD S F+N W+ Sbjct: 119 DQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTAT 178 Query: 172 ARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLT 231 RG + P D L AR F V+ P+P + EN + F Sbjct: 179 CRGETEIVLPNFD---LAARH-----FPPVDNTPSPEL--------VPDENVVMKRFVFD 222 Query: 232 RDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYI--ATDGRSRL 289 ++++ AL+A++ ++S +++ ++W+ V + K + A + RSR+ Sbjct: 223 KEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRM 282 Query: 290 RPQLPPGYFGNVIFTATPLAVAGDL-LSKPTWYAAGQIHDFLVRMDDNY----LRSALDY 344 P LP GN+ AT L A D K G + L + +D++ L+ Sbjct: 283 NPPLPHYAMGNI---ATLLFAAVDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCL 339 Query: 345 LEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLP 404 E++P L TSW RL YD DFGWG+P+ P + ++ Sbjct: 340 YELEPQ-------------ELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMD 386 Query: 405 SPTNDGSLSVAIALQSEHM 423 + + DG + + + + M Sbjct: 387 TRSGDG-VEAWLPMAEDEM 404 >2E1U-A nrPDB Length = 454 Score = 369 bits (947), Expect = e-102, Method: Composition-based stats. Identities = 111/465 (23%), Positives = 179/465 (38%), Gaps = 70/465 (15%) Query: 3 INIRDSTMVRPATETPI-TNLWNSNVDLVIPRFH-TPSVYFYR-PTGASNFFDPQV--MK 57 + + + + V P +T +L + D R +++FY P S F + V +K Sbjct: 7 LTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIK 66 Query: 58 EALSKALVPFYPMAGRL-------KRDDDGRIEIDCNGAGVLFVV---------ADTPSV 101 +LS L FYP G+L K+ + +E D V F + P Sbjct: 67 HSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGD--SVAVTFAECNLDLNELTGNHPRN 124 Query: 102 IDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSG 161 D F D P L E + PL +QVT F G ++G+ H D + Sbjct: 125 CDKFYDLVPILG------ESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTR 178 Query: 162 LHFINTWSDMAR-------GLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLD 214 F+ W+ +AR L P DR + P + A D Sbjct: 179 FCFLKAWTSIARSGNNDESFLANGTRPLYDRII------KYPMLDEAYLKRAKVESFNED 232 Query: 215 ---PSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSY-SSYEMLAGHVWRSVGKARG 270 S +GP + + F LTR + LK + T+ Y SS+ + ++W + K+R Sbjct: 233 YVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR- 291 Query: 271 LPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQI---- 326 ND+ D R+R++P +P YFGN + +A L+ K + A ++ Sbjct: 292 --NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGEN 349 Query: 327 -HDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWV----RLPIYDADF 381 H L D L+ D +E DL + G T +WV +L YD DF Sbjct: 350 LHKTLTDYKDGVLK---DDMESFNDL--VSEGMPT-------TMTWVSGTPKLRFYDMDF 397 Query: 382 GWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLF 426 GWG+P + I + G + ++ L + + + + M+ F Sbjct: 398 GWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDF 442 >2XR7-A nrPDB Length = 453 Score = 360 bits (924), Expect = e-100, Method: Composition-based stats. Identities = 108/452 (23%), Positives = 180/452 (39%), Gaps = 61/452 (13%) Query: 13 PATETPITNLWNSNVDLVIPRFH-TPSVYFYR-PTGASNFFDPQV--MKEALSKALVPFY 68 P + T +T L + D V FH + FY+ P +F + +K++LS L + Sbjct: 14 PGSATELT-LPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYL 72 Query: 69 PMAGRLK--RDDDGRIE---IDCNGAGVLFVVAD---------TPSVIDDFGDFAPTLNL 114 P+AG + +D G E + N V+F +D P DF F P L Sbjct: 73 PLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQL-- 130 Query: 115 RQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMAR- 173 E + G+ P+L +QVT F G S+G H A DG + + F+ W+ + + Sbjct: 131 ----AEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKF 186 Query: 174 -----GLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIF 228 L PF DR+++ P + + + P + F Sbjct: 187 GGDEQFLANEFIPFYDRSVI---KDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKVRGTF 243 Query: 229 KLTRDQLVALKAKSKEDGNTVSY-SSYEMLAGHVWRSVGKARGLPNDQETK-----LYIA 282 +TR + LK +++ +S+ + +VW + K+ ++ + A Sbjct: 244 IITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCA 303 Query: 283 TDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVR---MDDNYLR 339 D R++ P LPP YFGN + DL K + A ++ +R D+ ++ Sbjct: 304 ADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWIL 363 Query: 340 SA---LDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPY 396 S +Y ++ S V G+ +L +Y ADFGWGRP + I Sbjct: 364 SGSWFKEYDKVDAKRSLSVAGSP-------------KLDLYAADFGWGRPEKLEFVSIDN 410 Query: 397 -EGLSFVL-PSPTNDGSLSVAIALQSEHMKLF 426 +G+S L S +DG L + ++L M F Sbjct: 411 DDGISMSLSKSKDSDGDLEIGLSLSKTRMNAF 442 >3B30-A nrPDB Length = 451 Score = 280 bits (715), Expect = 1e-75, Method: Composition-based stats. Identities = 74/316 (23%), Positives = 118/316 (37%), Gaps = 31/316 (9%) Query: 131 PLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRA 190 P+++LQ+ F K GG L V QH A D I S R T L Sbjct: 135 PVILLQLNFIK-GGLILTVNGQHGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNL--D 191 Query: 191 RDPPQPAFHHVEYQPAPSMKIPLDPSKSG-----PENTTVSIFKLTRDQLVALK--AKSK 243 R P + P +I G P + + + F + + LK A Sbjct: 192 RKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMSELKDAATKT 251 Query: 244 EDGNTVSYSSYEMLAGHVWRSVGKAR--GLPNDQETKLYIATDGRSRLR-PQLPPGYFGN 300 D +T S+ + L+ +W+S + R + T+ A D R + PG N Sbjct: 252 LDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMGVSNNYPGLLQN 311 Query: 301 VIFT-ATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAH 359 + + +T +A + L ++ +R R YL PD S + A Sbjct: 312 MTYHNSTIGEIANESLGATASRLRSELDPASMR---QRTRGLATYLHNNPDKSNVSLTAD 368 Query: 360 TYKCPNLGITSWVRLPIYDADFGWG--------RPIFMGPGGIPYEGLSFVLPSPTNDGS 411 ++ ++SW ++ ++D DFG G RPIF P E L + +P DG Sbjct: 369 ADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFE-----PVESLMYFMPKKP-DGE 422 Query: 412 LSVAIALQSEHMKLFE 427 A++L+ E M + Sbjct: 423 FCAALSLRDEDMDRLK 438 >2ZBA-A nrPDB Length = 459 Score = 268 bits (686), Expect = 2e-72, Method: Composition-based stats. Identities = 74/318 (23%), Positives = 125/318 (39%), Gaps = 36/318 (11%) Query: 131 PLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRA 190 P+L+LQ+ F K GG L V QH A D I S R T L Sbjct: 144 PVLLLQLNFIK-GGLILTVNGQHGAMDMTGQDAIIRLLSKACRNESFTEEEISAMNL--D 200 Query: 191 RDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENT----TVSIFKLTRDQLVALK--AKSKE 244 R P + + P +I T + F T L LK A Sbjct: 201 RKTVVPLLENYKVGPELDHQIAKPAPAGDAPPAPAKATWAFFSFTPKALSELKDAATKTL 260 Query: 245 DGNTVSYSSYEMLAGHVWRSVGKAR--GLPNDQETKLYIATDGRSRLR-PQLPPGYFGNV 301 D ++ S+ + L+ +W+S + R L T+ A D R + PG N+ Sbjct: 261 DASSKFVSTDDALSAFIWQSTSRVRLARLDASTPTEFCRAVDMRGPMGVSSTYPGLLQNM 320 Query: 302 IFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLR----SALDYLEMQPDLSALVRG 357 + + +A ++ ++P A ++ L + + LR + Y+ PD S++ Sbjct: 321 TYHDSTVA---EIANEPLGATASRLRSEL---NSDRLRRRTQALATYMHGLPDKSSVSLT 374 Query: 358 AHTYKCPNLGITSWVRLPIYDADFGWG--------RPIFMGPGGIPYEGLSFVLPSPTND 409 A ++ ++SW ++ ++ DFG+G RP F P+E L + +P D Sbjct: 375 ADANPSSSIMLSSWAKVGCWEYDFGFGLGKPESVRRPRFE-----PFESLMYFMPKKP-D 428 Query: 410 GSLSVAIALQSEHMKLFE 427 G + +I+L+ E M+ + Sbjct: 429 GEFTASISLRDEDMERLK 446 >1Q9J-A nrPDB Length = 422 Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 75/220 (34%), Gaps = 25/220 (11%) Query: 128 HSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTW----SDMARGLDLTIP--- 180 S LL LQ+ + GGA L + + H ADG G ++ +D D Sbjct: 100 QSVSLLHLQL-ILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQ 158 Query: 181 --PFIDRTLLRARDPPQPAFHHVE--------YQPAPSMKIPLDPSKSGPENTTVSIFKL 230 P +L R + E Y+ + + P+ V+ L Sbjct: 159 PTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWL 218 Query: 231 TRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLR 290 ++ Q L A +E +++ ++A + + + R P+ D R L Sbjct: 219 SKQQTSDLMAFGREHRLSLN----AVVAAAILLTEWQLRNTPH-VPIPYVYPVDLRFVLA 273 Query: 291 PQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFL 330 P + P N++ A+ LA G + A I L Sbjct: 274 PPVAPTEATNLLGAASYLAEIGP--NTDIVDLASDIVATL 311 >1XM9-A nrPDB Length = 457 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 36/101 (35%), Gaps = 8/101 (7%) Query: 205 PAPSMKIPLDPSKSGPENTTVSIFKLTRD----QLVALKAKSKEDGNTVSYSSY----EM 256 P + ++ + S N+ +S + + L+ S D + +Y + Sbjct: 130 PVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDS 189 Query: 257 LAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGY 297 L +V V +R E + + + RL ++P Y Sbjct: 190 LMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRY 230 >2JGP-A nrPDB Length = 520 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 2/88 (2%) Query: 87 NGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGAS 146 NG V + D P + R+L+ + + PL+ + + Sbjct: 158 NGEPVQNIHEDVPFALA--YSEVTEEEARELVSSLVQPFDLEVAPLIRVSLLKIGEDRYV 215 Query: 147 LGVGMQHHAADGFSGLHFINTWSDMARG 174 L M H +DG S + W + +G Sbjct: 216 LFTDMHHSISDGVSSGILLAEWVQLYQG 243 >1Z4X-A nrPDB Length = 532 Score = 30.1 bits (66), Expect = 2.1, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 22/70 (31%), Gaps = 9/70 (12%) Query: 79 DGRIEIDCNGAGVLFVVADTPSVIDDFG---------DFAPTLNLRQLIPEVDHSAGIHS 129 ++E +C+ + L + I+ F P LN+ IP G Sbjct: 71 SDKLEQNCSWSAALINDNRYINGINQFYFSIAEGRNLTLGPLLNMPSFIPTATTPEGCTR 130 Query: 130 FPLLVLQVTF 139 P L T Sbjct: 131 IPSFSLTKTH 140 >2ORY-A nrPDB Length = 346 Score = 29.4 bits (64), Expect = 2.9, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%) Query: 368 ITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAI 416 + +W D + WG ++ P I + + +V+ +G +AI Sbjct: 41 LKTWKPFQEDDWEVVWGPAVYTMPFTIFNDAMMYVIQKKGAEGEYVIAI 89 >1XAD-A nrPDB Length = 345 Score = 29.4 bits (64), Expect = 3.5, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 14 ATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASN 49 + +P+ + NVD VI R T +YF P G S Sbjct: 113 SDASPLKKEYIDNVDFVIVRELTGGIYFGEPRGMSE 148 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.124 0.324 Lambda K H 0.267 0.0384 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,030,457 Number of Sequences: 36641 Number of extensions: 626870 Number of successful extensions: 1444 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 1337 Number of HSP's gapped (non-prelim): 39 length of query: 433 length of database: 10,336,785 effective HSP length: 100 effective length of query: 333 effective length of database: 6,672,685 effective search space: 2222004105 effective search space used: 2222004105 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 60 (27.8 bits)