BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9DB05 (295 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3J98-H nrPDB 605 e-174 1QQE-A nrPDB 159 1e-39 2IFU-A nrPDB 49 2e-06 5EFR-A nrPDB 30 1.3 2D74-A nrPDB 30 1.7 5XX9-A nrPDB 29 3.0 1ZU2-A nrPDB 28 4.9 1CD3-B nrPDB 27 8.3 >3J98-H nrPDB Length = 297 Score = 605 bits (1560), Expect = e-174, Method: Compositional matrix adjust. Identities = 293/295 (99%), Positives = 294/295 (99%) Query: 1 MDNSGKQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSA 60 MD SGKQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSA Sbjct: 3 MDTSGKQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSA 62 Query: 61 AGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIA 120 AGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIA Sbjct: 63 AGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIA 122 Query: 121 AKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQK 180 AKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQK Sbjct: 123 AKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQK 182 Query: 181 AIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRE 240 AIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRE Sbjct: 183 AIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRE 242 Query: 241 CKLMKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295 CKLMKKLLEAHEEQNVDSYTE+VKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR Sbjct: 243 CKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 297 >1QQE-A nrPDB Length = 292 Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 163/291 (56%), Gaps = 5/291 (1%) Query: 8 AEAMALLAEAERKVKNSQSFFSGLFGGSS--KIEEACEIYARAANMFKMAKNWSAAGNAF 65 ++ + LL AE+K S F LF GS K EEA ++ +AA ++++ K + AG++F Sbjct: 2 SDPVELLKRAEKKGVPSSGFMK-LFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSF 60 Query: 66 CQAAQLHLQLQSKHDAATCFVDAGNAFKKA-DPQEAINCLMRAIEIYTDMGRFTIAAKHH 124 +AA + ++ +A +V+A FK + A++ L AI+I+T G+F A Sbjct: 61 LKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFK 120 Query: 125 ISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDI 184 + EI E +L D KAI YE + ++Y ++S + +NKC +K A A QY +A DI Sbjct: 121 FELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDI 180 Query: 185 YEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKL-AVQKYEELFPAFSDSRECKL 243 Y ++ S+M + L ++S KDYF K LC A +Q+ + P F+DSRE Sbjct: 181 YSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNF 240 Query: 244 MKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDL 294 +K L++A E + + +E KE+D+ RLD+W T+L +IK++IQ E+DL Sbjct: 241 LKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDL 291 >2IFU-A nrPDB Length = 307 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 26/259 (10%) Query: 6 KQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAF 65 K +EA +A+AE+ +K S + A YA+AA FK AK A +A+ Sbjct: 6 KISEAHEHIAKAEKYLKTS------FMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAY 59 Query: 66 CQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQ---EAINCLMRAIEIYTDMGRFTIAAK 122 Q A+ H +S AA F AG K D Q EA+ + +A +Y + G AA Sbjct: 60 LQEAEAHANNRSLFHAAKAFEQAGMMLK--DLQRMPEAVQYIEKASVMYVENGTPDTAAM 117 Query: 123 HHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAI 182 ++ E +D+ KA+ Y+Q+A ++ EE A + + G A++L Q+ Sbjct: 118 ALDRAGKLMEP--LDLSKAVHLYQQAAAVFENEERLRQAAELI----GKASRLLVRQQKF 171 Query: 183 DIYEQVGTSAMDSPLLKYSAKDYF--FKAALCHFCIDMLNAK-LAVQK-YEELF--PAFS 236 D + S + ++Y +K + + + A +A QK E + P FS Sbjct: 172 D---EAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSIPGFS 228 Query: 237 DSRECKLMKKLLEAHEEQN 255 S +C ++ LL+A++EQ+ Sbjct: 229 GSEDCAALEDLLQAYDEQD 247 >5EFR-A nrPDB Length = 446 Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust. Identities = 12/28 (42%), Positives = 21/28 (75%) Query: 172 AAQLEQYQKAIDIYEQVGTSAMDSPLLK 199 A Q E+Y++A+++YE++ DSPLL+ Sbjct: 390 ARQPERYRRAVELYERLLQIFPDSPLLR 417 >2D74-A nrPDB Length = 419 Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 7/80 (8%) Query: 117 FTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAG-YAAQL 175 I + +I IA+ + ELVD EKA+ +Y Q ++ KG + N ++ ++ + A + Sbjct: 133 LQIIGQKNIIIAQ-NKIELVDKEKALENYRQIKEFIKG---TVAENAPIIPISALHGANI 188 Query: 176 EQYQKAIDIYEQVGTSAMDS 195 + KAI+ E + T DS Sbjct: 189 DVLVKAIE--EFIPTPKRDS 206 >5XX9-A nrPDB Length = 167 Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 8/52 (15%) Query: 99 EAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSAD 150 EAI+ L R IE+ + AKH I+ A ++E L D E I + E D Sbjct: 96 EAIDRLRRGIEV--------MRAKHDITSANVFEAILADEEHHIDYLETQLD 139 >1ZU2-A nrPDB Length = 158 Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 13/115 (11%) Query: 43 EIYARAANMFKM----AKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKA--- 95 +I A N +K A N + G + +Q H S DA +A F++A Sbjct: 20 QIRQDAENTYKSNPLDADNLTRWGGVLLELSQFH----SISDAKQMIQEAITKFEEALLI 75 Query: 96 DPQ--EAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQS 148 DP+ EA+ C+ A + + AKH+ +A + + VD + HY +S Sbjct: 76 DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKS 130 >1CD3-B nrPDB Length = 120 Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 4/48 (8%) Query: 4 SGKQAEAMALLAEAERKVKN----SQSFFSGLFGGSSKIEEACEIYAR 47 +G + +A+ EAERK ++ +S+ S FGG++ +++ +IYAR Sbjct: 46 AGLRRDAVQPDIEAERKKRDEIEAGKSYCSRRFGGATCDDKSAQIYAR 93 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3J98-H nrPDB 404 e-113 1QQE-A nrPDB 346 7e-96 2IFU-A nrPDB 219 9e-58 Sequences not found previously or not previously below threshold: 6MFV-A nrPDB 39 0.004 2QBY-B nrPDB 36 0.020 4I9E-A nrPDB 30 1.6 4JA9-A nrPDB 30 1.7 2OOE-A nrPDB 30 1.7 3UDT-A nrPDB 29 1.7 2OND-A nrPDB 29 1.9 2ZSJ-A nrPDB 29 2.2 5K3J-A nrPDB 28 4.7 5J7I-A nrPDB 28 6.0 1W3B-A nrPDB 28 6.2 5WRW-A nrPDB 27 6.5 CONVERGED! >3J98-H nrPDB Length = 297 Score = 404 bits (1037), Expect = e-113, Method: Composition-based stats. Identities = 293/295 (99%), Positives = 294/295 (99%) Query: 1 MDNSGKQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSA 60 MD SGKQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSA Sbjct: 3 MDTSGKQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSA 62 Query: 61 AGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIA 120 AGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIA Sbjct: 63 AGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIA 122 Query: 121 AKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQK 180 AKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQK Sbjct: 123 AKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQK 182 Query: 181 AIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRE 240 AIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRE Sbjct: 183 AIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRE 242 Query: 241 CKLMKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 295 CKLMKKLLEAHEEQNVDSYTE+VKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR Sbjct: 243 CKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDLR 297 >1QQE-A nrPDB Length = 292 Score = 346 bits (887), Expect = 7e-96, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 163/292 (55%), Gaps = 5/292 (1%) Query: 7 QAEAMALLAEAERKVKNSQSFFSGLFGGSS--KIEEACEIYARAANMFKMAKNWSAAGNA 64 ++ + LL AE+K S F LF GS K EEA ++ +AA ++++ K + AG++ Sbjct: 1 ISDPVELLKRAEKKGVPSSGFMK-LFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDS 59 Query: 65 FCQAAQLHLQLQSKHDAATCFVDAGNAFKKA-DPQEAINCLMRAIEIYTDMGRFTIAAKH 123 F +AA + ++ +A +V+A FK + A++ L AI+I+T G+F A Sbjct: 60 FLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANF 119 Query: 124 HISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAID 183 + EI E +L D KAI YE + ++Y ++S + +NKC +K A A QY +A D Sbjct: 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASD 179 Query: 184 IYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKL-AVQKYEELFPAFSDSRECK 242 IY ++ S+M + L ++S KDYF K LC A +Q+ + P F+DSRE Sbjct: 180 IYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESN 239 Query: 243 LMKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQGDEEDL 294 +K L++A E + + +E KE+D+ RLD+W T+L +IK++IQ E+DL Sbjct: 240 FLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQEDDL 291 >2IFU-A nrPDB Length = 307 Score = 219 bits (558), Expect = 9e-58, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 22/266 (8%) Query: 6 KQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAF 65 K +EA +A+AE+ +K S + A YA+AA FK AK A +A+ Sbjct: 6 KISEAHEHIAKAEKYLKTS------FMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAY 59 Query: 66 CQAAQLHLQLQSKHDAATCFVDAGNAFKKAD-PQEAINCLMRAIEIYTDMGRFTIAAKHH 124 Q A+ H +S AA F AG K EA+ + +A +Y + G AA Sbjct: 60 LQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMAL 119 Query: 125 ISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDI 184 ++ E +D+ KA+ Y+Q+A ++ EE A + + G A++L Q+ D Sbjct: 120 DRAGKLMEP--LDLSKAVHLYQQAAAVFENEERLRQAAELI----GKASRLLVRQQKFD- 172 Query: 185 YEQVGTSAMDSPLLKYSAKDYF--FKAALCHFCIDMLNAK-LAVQK-YEELF--PAFSDS 238 + S + ++Y +K + + + A +A QK E + P FS S Sbjct: 173 --EAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESYSIPGFSGS 230 Query: 239 RECKLMKKLLEAHEEQNVDSYTEAVK 264 +C ++ LL+A++EQ+ + + Sbjct: 231 EDCAALEDLLQAYDEQDEEQLLRVCR 256 >6MFV-A nrPDB Length = 653 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 11/207 (5%) Query: 5 GKQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNW-SAAGN 63 G +A+ LL EAE V + F ++ + E +A K K + Sbjct: 380 GLFEKAIKLLKEAEPYV--DEFFKCEIYSWLADAYMELENLEKAERYLKKTKEIVEKIND 437 Query: 64 AFCQAAQLHLQLQSKHDAATCFVDAGNAFKK-------ADPQEAINCLMRAIEIYTDMGR 116 + + + + ++ +A K+ DP++ L+ +IY MG Sbjct: 438 MYAWFSYYAEKTKYEYYKENSREALKSALKELEIIRKIGDPEKEGLVLLHVGDIYLHMGN 497 Query: 117 FTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLE 176 + ++ ++ + + + I++ E + YY + A++ K A Y + Sbjct: 498 YEKGISYYQEALKMAKAYGIKFLEHISYMELAKGYY-QLKLYEKASEYSEKAANYFLMIR 556 Query: 177 QYQKAIDIYEQVGTSAMDSPLLKYSAK 203 Y++A D S + + L+ + K Sbjct: 557 NYRRATDAMAYGSVSYIATKNLEKAEK 583 >2QBY-B nrPDB Length = 384 Score = 35.9 bits (81), Expect = 0.020, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 5/125 (4%) Query: 67 QAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHIS 126 + A+ L + D ++ A +A + D ++A+N L RA ++ + G +H Sbjct: 208 KYAEYGLIKGTYDDEILSYIAAISAKEHGDARKAVNLLFRAAQLASGGGIIRK--EHVDK 265 Query: 127 IAEIYETE-LVDVEKAIA-HYEQSADYYKGEESNSSANKCLLK-VAGYAAQLEQYQKAID 183 YE E L++ KA+ HY+ + E SA+K + + Y++ D Sbjct: 266 AIVDYEQERLIEAVKALPFHYKLALRSLIESEDVMSAHKMYTDLCNKFKQKPLSYRRFSD 325 Query: 184 IYEQV 188 I ++ Sbjct: 326 IISEL 330 >4I9E-A nrPDB Length = 383 Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 75/203 (36%), Gaps = 16/203 (7%) Query: 6 KQAEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAK-NWSAAGNA 64 + ++ + + + + ++ ++ F G ++++ Y A FK A+ + Sbjct: 82 RLSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQ--REYLSAIKFFKKAESKLIFVKDR 139 Query: 65 FCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHH 124 +A +S + + +++ +A EIY + + I Sbjct: 140 IEKAEFFFKMSESYYYMKQTYF-------------SMDYARQAYEIYKEHEAYNIRLLQC 186 Query: 125 ISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDI 184 S+ +L E AI+H++++ + E+ + L + QY+ AI Sbjct: 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPY 246 Query: 185 YEQVGTSAMDSPLLKYSAKDYFF 207 +++ +S +L + YF Sbjct: 247 FKRAIAVFEESNILPSLPQAYFL 269 >4JA9-A nrPDB Length = 488 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 4/134 (2%) Query: 128 AEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKA-IDIYE 186 A+ YE + +AI +A YY +C G A + + K I Y Sbjct: 30 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYY 89 Query: 187 QVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKLMKK 246 + S M + + +DY + + +AK+ Q+ ++ + R + Sbjct: 90 RRAASNMALGKFRAALRDY---ETVVKVKPNDKDAKMKYQECSKIVKQKAFERAIAGDEH 146 Query: 247 LLEAHEEQNVDSYT 260 + +++S T Sbjct: 147 RRSVVDSLDIESMT 160 >2OOE-A nrPDB Length = 530 Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 151 YYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAM-DSPLLKYSAKDY 205 +Y+ + ++K L + +A +IYE+ ++ + + LL ++ DY Sbjct: 275 WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADY 330 Score = 29.0 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 7/67 (10%) Query: 99 EAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEK-------AIAHYEQSADY 151 EA L ++ ++ + G A A IYE + + K A A YE+S Sbjct: 277 EAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMK 336 Query: 152 YKGEESN 158 Y+ S Sbjct: 337 YEKVHSI 343 >3UDT-A nrPDB Length = 493 Score = 29.4 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 13/117 (11%) Query: 31 LFGGSSK--IEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDA 88 LF GS + +E +Y+ N F++ N + ++ + F DA Sbjct: 251 LFSGSKERVLEAIKALYSTPQNNFRVFLN-----GSLILGGSGESTGRTSPEIGYAFEDA 305 Query: 89 GNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHY 145 F +++ C ++ + + + EI + + +D+E AI Y Sbjct: 306 LKGFIQSEDGHRTECFLQLVSDAVY------GSGVLDRLLEIQKLDKLDIEGAIHCY 356 >2OND-A nrPDB Length = 308 Score = 29.4 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 151 YYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAM-DSPLLKYSAKDY 205 +Y+ + ++K L + +A +IYE+ ++ + + LL ++ DY Sbjct: 53 WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADY 108 Score = 28.6 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 7/67 (10%) Query: 99 EAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEK-------AIAHYEQSADY 151 EA L ++ ++ + G A A IYE + + K A A YE+S Sbjct: 55 EAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMK 114 Query: 152 YKGEESN 158 Y+ S Sbjct: 115 YEKVHSI 121 >2ZSJ-A nrPDB Length = 352 Score = 29.4 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 30/90 (33%) Query: 114 MGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAA 173 G F A I E + E+V+ Q ++ ++ A G A Sbjct: 133 QGTFDDALNIVRKIGENFPVEIVNSVNPYRIEGQKTAAFEICDTLGEAPDYHFIPVGNAG 192 Query: 174 QLEQYQKAIDIYEQVGTSAMDSPLLKYSAK 203 + Y K IY + G ++ + A+ Sbjct: 193 NITAYWKGFKIYYEEGKITKLPRMMGWQAE 222 >5K3J-A nrPDB Length = 674 Score = 28.2 bits (61), Expect = 4.7, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 247 LLEAHEEQNVDSYTEAVKEYDSISRLDQWLTT-MLLRIKKTIQGDE 291 L + +E ++ S VK +++++R W T L++ ++ + E Sbjct: 468 LADKSDETDLTSLNGYVKMFENMARRQAWKATEKFLKLMESGESRE 513 >5J7I-A nrPDB Length = 488 Score = 27.8 bits (60), Expect = 6.0, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 9/92 (9%) Query: 104 LMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANK 163 + +A+++ F A + + + EK +A +Q Y+ EE Sbjct: 254 IAKAVQLIIQSKTFDYGTICASEQALLVDESIK--EKVVAELKQQGAYFLNEEEKQKVAS 311 Query: 164 CLL-------KVAGYAAQLEQYQKAIDIYEQV 188 ++ K+ G A Q+ I+I V Sbjct: 312 IIMVNGSLNAKIVGKAPQVIAEMAGIEIPSDV 343 >1W3B-A nrPDB Length = 388 Score = 27.8 bits (60), Expect = 6.2, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 44/101 (43%), Gaps = 22/101 (21%) Query: 63 NAFCQAAQLHLQLQSKHDAATCFVDAGNAF---------------KKADPQEAINCLMRA 107 +A+C A + S +A C+ A ++ + +EA+ +A Sbjct: 272 DAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 331 Query: 108 IEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQS 148 +E++ + A H ++A + + + +++A+ HY+++ Sbjct: 332 LEVFPEF------AAAHSNLASVLQQQG-KLQEALMHYKEA 365 >5WRW-A nrPDB Length = 163 Score = 27.5 bits (59), Expect = 6.5, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 3/101 (2%) Query: 98 QEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQS---ADYYKG 154 ++ + L + G F A + ++ + EKA Y + Sbjct: 42 KDDVTALHCKVVCLIQNGSFKEALNVINTHTKVLANNSLSFEKAYCEYRLNRIENALKTI 101 Query: 155 EESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDS 195 E +N +K +LE+Y + + +Y + ++ D Sbjct: 102 ESANQQTDKLKELYGQVLYRLERYDECLAVYRDLVRNSQDD 142 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.123 0.293 Lambda K H 0.267 0.0374 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,685,232 Number of Sequences: 36641 Number of extensions: 282006 Number of successful extensions: 1002 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 966 Number of HSP's gapped (non-prelim): 39 length of query: 295 length of database: 10,336,785 effective HSP length: 96 effective length of query: 199 effective length of database: 6,819,249 effective search space: 1357030551 effective search space used: 1357030551 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 58 (27.1 bits)