BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q9C6D2
         (420 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2PYW-A nrPDB                                                          878   0.0  
2PUP-A nrPDB                                                          253   1e-67
3LQ3-A nrPDB                                                           31   0.85 
3MES-A nrPDB                                                           30   2.0  
3HR8-A nrPDB                                                           30   2.0  
3F7W-A nrPDB                                                           29   3.2  
4DA5-A nrPDB                                                           29   4.3  
2ZO6-A nrPDB                                                           28   6.0  
5FNO-A nrPDB                                                           28   6.1  
2EZ1-A nrPDB                                                           28   8.4  
4WZY-A nrPDB                                                           28   8.5  
4O7O-A nrPDB                                                           28   9.6  

>2PYW-A nrPDB
          Length = 420

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/420 (100%), Positives = 420/420 (100%)

Query: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60
           MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120
           VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL 180
           PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL 180

Query: 181 TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH 240
           TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH
Sbjct: 181 TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH 240

Query: 241 TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWIL 300
           TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWIL
Sbjct: 241 TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWIL 300

Query: 301 RTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGA 360
           RTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGA
Sbjct: 301 RTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGA 360

Query: 361 AKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVVSAIQQQS 420
           AKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVVSAIQQQS
Sbjct: 361 AKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVVSAIQQQS 420


>2PUP-A nrPDB
          Length = 397

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/414 (35%), Positives = 235/414 (56%), Gaps = 40/414 (9%)

Query: 6   FTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSG--SLVIK 63
           +  LNE S V       AL+ K+G   S   L  +E+GDGNLN+VF +       +L+IK
Sbjct: 9   YETLNESSAV-------ALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIK 61

Query: 64  QALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEPPH 123
           QA+PY + +GESWP+T +RA  E++ L + G   P  VP V++ D  MA+  M  L   H
Sbjct: 62  QAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS--H 119

Query: 124 I-ILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTE 182
           + I RKGLI G  YP L+ H+ +++ KTLF++S    +    ++ V +F  N ELC +TE
Sbjct: 120 LKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFT-NPELCDITE 178

Query: 183 QVVFSDPY---RVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDL 239
           ++VF+DP+     + F     P+++     +  + ++K+E A+LK  F   A+ LIHGDL
Sbjct: 179 RLVFTDPFFDHDTNDFEEELRPFVE----KLWNNDSVKIEAAKLKKSFLTSAETLIHGDL 234

Query: 240 HTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWI 299
           HTGS+  ++  T+VIDPEF+FYGP+GFD+G ++ NL L   ++DG      DR+     +
Sbjct: 235 HTGSIFASEHETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDG-----ADREP----L 285

Query: 300 LRTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFG 359
              + Q W  F + F   W ++          D+Y N   +     + + ++  +++GF 
Sbjct: 286 YEHVNQVWETFEETFSEAWQKDS--------LDVYAN---IDGYLTDTLSHIFEEAIGFA 334

Query: 360 AAKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVV 413
             ++IRR +G+AHV D ++I    +R   +R ALE     +++R +FK+I +V+
Sbjct: 335 GCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVI 388


>3LQ3-A nrPDB
          Length = 401

 Score = 31.2 bits (69), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)

Query: 215 ALKLEIAELKSMFCERAQALI--HGDLHTGSVMV-----TQDSTQVIDPEFSFYGPMGFD 267
           +LK E+  L+ +       ++  H D+  G++++       DS  ++D E+S Y   GFD
Sbjct: 223 SLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFD 282

Query: 268 IGAYL 272
           IG + 
Sbjct: 283 IGNHF 287


>3MES-A nrPDB
          Length = 424

 Score = 30.0 bits (66), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 14/47 (29%), Positives = 25/47 (53%)

Query: 236 HGDLHTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQ 282
           H DL   +++ TQ++ ++ID E+S     G DI  Y    I  + ++
Sbjct: 266 HNDLQENNLLQTQNNIRMIDYEYSAINFAGADIANYFCEYIYDYCSE 312


>3HR8-A nrPDB
          Length = 356

 Score = 30.0 bits (66), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 224 KSMFCERAQALIHGDLHTGSVMVTQDSTQVIDPEFSFYGPMGFDI----GAYLGNLILAF 279
           K    E+A   I  +   GS+M+  D TQV   E    G +  DI    G Y    I+  
Sbjct: 7   KKSVLEKALKRIEENFGKGSIMILGDETQVQPVEVIPTGSLAIDIATGVGGYPRGRIVEI 66

Query: 280 FAQD 283
           F Q+
Sbjct: 67  FGQE 70


>3F7W-A nrPDB
          Length = 288

 Score = 29.3 bits (64), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 233 ALIHGDLHTGSVMVTQDSTQVIDP 256
           A IHGDL  G+V+   D   VIDP
Sbjct: 189 ARIHGDLWNGNVLWQDDGAVVIDP 212


>4DA5-A nrPDB
          Length = 457

 Score = 28.9 bits (63), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 9/66 (13%)

Query: 216 LKLEIAELKSMFCERAQALI--HGDLHTGSVMVTQ-------DSTQVIDPEFSFYGPMGF 266
           L LE+  L+S+       ++  H D   G++++ +           +ID E+S Y   GF
Sbjct: 282 LPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGF 341

Query: 267 DIGAYL 272
           DIG + 
Sbjct: 342 DIGNHF 347


>2ZO6-A nrPDB
          Length = 254

 Score = 28.5 bits (62), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 2   SFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVV 54
           +F + +P+ +   + +  ST  ++ + G+ K DD   +K VG GN    F   
Sbjct: 154 TFPDSSPIAQNKTLGWEPSTEKMTVRDGSMKGDDAAYLKLVGGGNHKCYFTTT 206


>5FNO-A nrPDB
          Length = 605

 Score = 28.5 bits (62), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)

Query: 70  RCIGESWPMT-KERAYFEATTLRKHGNLSPDHVPEVYHF 107
           + +G+S+P T + RA +  T +R  G +  D+ PE+ HF
Sbjct: 351 KFVGDSYPTTGRWRAGYLDTDVRARGLVDADYGPELPHF 389


>2EZ1-A nrPDB
          Length = 456

 Score = 28.1 bits (61), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 105 YHFDRTMA-LIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYH 159
           YH +RT+  L G +++ P H    +G  A      LA     Y+A  ++FT+  YH
Sbjct: 78  YHLERTVQELFGFKHIVPTH----QGRGAENLLSQLAIKPGQYVAGNMYFTTTRYH 129


>4WZY-A nrPDB
          Length = 454

 Score = 28.1 bits (61), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 235 IHGDLHTGSVMVTQDSTQVID 255
           +HGDLH G V+ T D   +ID
Sbjct: 302 VHGDLHLGQVLRTPDDWLLID 322


>4O7O-A nrPDB
          Length = 455

 Score = 27.7 bits (60), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 11/21 (52%), Positives = 15/21 (71%)

Query: 235 IHGDLHTGSVMVTQDSTQVID 255
           +HGDLH G V+ T +S  +ID
Sbjct: 319 VHGDLHLGQVLRTPESWLLID 339


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2PYW-A nrPDB                                                          736   0.0  
2PUP-A nrPDB                                                          583   e-167

Sequences not found previously or not previously below threshold:

4DA5-A nrPDB                                                           33   0.31 
3LQ3-A nrPDB                                                           32   0.49 
2DPY-A nrPDB                                                           31   1.1  
1ZTM-A nrPDB                                                           31   1.2  
2C1C-A nrPDB                                                           29   3.0  
1F8F-A nrPDB                                                           29   3.8  
4LQ3-A nrPDB                                                           29   4.9  
3MES-A nrPDB                                                           29   5.3  
6GII-A nrPDB                                                           29   5.9  


CONVERGED!
>2PYW-A nrPDB
          Length = 420

 Score =  736 bits (1901), Expect = 0.0,   Method: Composition-based stats.
 Identities = 420/420 (100%), Positives = 420/420 (100%)

Query: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60
           MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL
Sbjct: 1   MSFEEFTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSGSL 60

Query: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120
           VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE
Sbjct: 61  VIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLE 120

Query: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL 180
           PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL
Sbjct: 121 PPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRL 180

Query: 181 TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH 240
           TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH
Sbjct: 181 TEQVVFSDPYRVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLH 240

Query: 241 TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWIL 300
           TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWIL
Sbjct: 241 TGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWIL 300

Query: 301 RTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGA 360
           RTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGA
Sbjct: 301 RTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGA 360

Query: 361 AKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVVSAIQQQS 420
           AKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVVSAIQQQS
Sbjct: 361 AKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVVSAIQQQS 420


>2PUP-A nrPDB
          Length = 397

 Score =  583 bits (1502), Expect = e-167,   Method: Composition-based stats.
 Identities = 146/414 (35%), Positives = 235/414 (56%), Gaps = 40/414 (9%)

Query: 6   FTPLNEKSLVDYIKSTPALSSKIGADKSDDDLVIKEVGDGNLNFVFIVVGSSG--SLVIK 63
           +  LNE S V       AL+ K+G   S   L  +E+GDGNLN+VF +       +L+IK
Sbjct: 9   YETLNESSAV-------ALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIK 61

Query: 64  QALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFDRTMALIGMRYLEPPH 123
           QA+PY + +GESWP+T +RA  E++ L + G   P  VP V++ D  MA+  M  L   H
Sbjct: 62  QAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDTEMAVTVMEDLS--H 119

Query: 124 I-ILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTE 182
           + I RKGLI G  YP L+ H+ +++ KTLF++S    +    ++ V +F  N ELC +TE
Sbjct: 120 LKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFT-NPELCDITE 178

Query: 183 QVVFSDPY---RVSTFNRWTSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDL 239
           ++VF+DP+     + F     P+++     +  + ++K+E A+LK  F   A+ LIHGDL
Sbjct: 179 RLVFTDPFFDHDTNDFEEELRPFVE----KLWNNDSVKIEAAKLKKSFLTSAETLIHGDL 234

Query: 240 HTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWI 299
           HTGS+  ++  T+VIDPEF+FYGP+GFD+G ++ NL L   ++DG      DR+     +
Sbjct: 235 HTGSIFASEHETKVIDPEFAFYGPIGFDVGQFIANLFLNALSRDG-----ADREP----L 285

Query: 300 LRTIEQTWNLFNKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFG 359
              + Q W  F + F   W ++          D+Y N   +     + + ++  +++GF 
Sbjct: 286 YEHVNQVWETFEETFSEAWQKDS--------LDVYAN---IDGYLTDTLSHIFEEAIGFA 334

Query: 360 AAKMIRRIVGVAHVEDFESIEEDKRRAICERSALEFAKMLLKERRKFKSIGEVV 413
             ++IRR +G+AHV D ++I    +R   +R ALE     +++R +FK+I +V+
Sbjct: 335 GCELIRRTIGLAHVADLDTIVPFDKRIGRKRLALETGTAFIEKRSEFKTITDVI 388


>4DA5-A nrPDB
          Length = 457

 Score = 32.7 bits (73), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 216 LKLEIAELKSMFCERAQALI--HGDLHTGSVMVTQ-------DSTQVIDPEFSFYGPMGF 266
           L LE+  L+S+       ++  H D   G++++ +           +ID E+S Y   GF
Sbjct: 282 LPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGF 341

Query: 267 DIGAYLGNLILAFFAQDGHATQENDRK-EYKQWILRTIEQTWNLFNKRFIALWDQNKDGP 325
           DIG +    +  +  +     + N RK   K+  L  I      F   F  L  + K   
Sbjct: 342 DIGNHFCEWMYDYSYEKYPFFRANIRKYPTKKQQLHFISSYLPAFQNDFENLSTEEKSII 401

Query: 326 GEAYLADI 333
            E  L ++
Sbjct: 402 KEEMLLEV 409


>3LQ3-A nrPDB
          Length = 401

 Score = 32.0 bits (71), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 30/106 (28%)

Query: 215 ALKLEIAELKSMFCERAQALI--HGDLHTGSVMV-----TQDSTQVIDPEFSFYGPMGFD 267
           +LK E+  L+ +       ++  H D+  G++++       DS  ++D E+S Y   GFD
Sbjct: 223 SLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFD 282

Query: 268 IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLFNKR 313
           IG +                       + +W+     + W  +  R
Sbjct: 283 IGNH-----------------------FCEWVYDYTHEEWPFYKAR 305


>2DPY-A nrPDB
          Length = 438

 Score = 30.8 bits (68), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 4/96 (4%)

Query: 123 HIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTE 182
           HI+L + L     YP +    S   A T   T   Y      ++ ++ F  N +L  +  
Sbjct: 332 HIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVGA 391

Query: 183 QVVFSDPYRVSTFNRW--TSPYLDDD--AKAVREDS 214
               SDP        W     +L      +A  EDS
Sbjct: 392 YAKGSDPMLDKAITLWPQLEAFLQQGIFERADWEDS 427


>1ZTM-A nrPDB
          Length = 490

 Score = 30.8 bits (68), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 367 IVGVAHVEDF--ESIEEDKRRAICERSALEFAKMLLKERRKFKSI-GEVVSAIQQQ 419
           IV +  V+D+  + I     R  CE + L+    L +   +  +I G+ + ++Q++
Sbjct: 151 IVAIKSVQDYVNKEIVPSIARLGCEAAGLQLGIALTQHYSELTNIFGDNIGSLQEK 206


>2C1C-A nrPDB
          Length = 312

 Score = 29.3 bits (64), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 311 NKRFIALWDQNKDGPGEAYLADIYNNTEVLKFVQENYMRNLLHDSLGFGAAKMIRRIVG 369
           N+ F  +W  N  G   +  +DIY  T     V+   +R++LH+ L   A  +     G
Sbjct: 140 NRNFDFVW--NSIGTSNSPCSDIYAGTSAFSEVETRVVRDILHEHLARMALYLTMHSFG 196


>1F8F-A nrPDB
          Length = 371

 Score = 28.9 bits (63), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 30/145 (20%)

Query: 14  LVDYIKSTPALSSKIGAD------KSDDDLVIKEVGDGNLNFVFIVVGSSGSLVIKQALP 67
            VD ++S   L+ ++GA         D    IKE+ DG +NF     GS    ++KQ + 
Sbjct: 220 AVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPE--ILKQGVD 277

Query: 68  YIRCIGE----SWPMTKERAYFEATTL---------RKHGNLSP-DHVPEV--------Y 105
            +  +G+      P     A F+   L            G+ SP   +PE+        +
Sbjct: 278 ALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKF 337

Query: 106 HFDRTMALIGMRYLEPPHIILRKGL 130
            FD+ +       +    I  RKG+
Sbjct: 338 PFDQLVKFYAFDEINQAAIDSRKGI 362


>4LQ3-A nrPDB
          Length = 526

 Score = 28.5 bits (62), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 14/172 (8%)

Query: 140 ADHMSDYMAKTLFFTSLLYHDTTEHRRAVTEFCGNVELCRLTE-QVVFSDPYRVSTFNRW 198
           A+ +  +       ++ +  D  +    + E+         TE  +V S+     TF R 
Sbjct: 335 ANSLFSFYGDDEIVSTDIKLDPEKLTAKLKEYGLKPTRPDKTEGPLVISEDLNGLTFLRR 394

Query: 199 TSPYLDDDAKAVREDSALKLEIAELKSMFCERAQALIHGDLHTGSVMVTQDSTQVID--P 256
           T            E S++      L+ M+  R     H D     +  +Q   Q++    
Sbjct: 395 TVTRDPAGWFGKLEQSSI------LRQMYWTRGPN--HEDPSETMIPHSQRPIQLMSLLG 446

Query: 257 EFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308
           E + +GP  +   + +  L++A   + G       ++   +W+  +   TW 
Sbjct: 447 EAALHGPAFY---SKISKLVIAELKEGGMDFYVPRQEPMFRWMRFSDLSTWE 495


>3MES-A nrPDB
          Length = 424

 Score = 28.5 bits (62), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 9/66 (13%)

Query: 236 HGDLHTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEY 295
           H DL   +++ TQ++ ++ID E+S     G DI  Y    I  + +         +++ Y
Sbjct: 266 HNDLQENNLLQTQNNIRMIDYEYSAINFAGADIANYFCEYIYDYCS---------EKQPY 316

Query: 296 KQWILR 301
            ++   
Sbjct: 317 FKFKYE 322


>6GII-A nrPDB
          Length = 479

 Score = 28.5 bits (62), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 25/92 (27%)

Query: 105 YHFDRTMALIGMRYLEPPHIILRKGLIAGIEYPFLADHMSDYMAKTLFFTSLLYHDTTEH 164
           Y F+RT+        EP H+  R+ L+     PF ++H+++             H+    
Sbjct: 145 YAFNRTL---VNED-EPMHLERRRVLME----PFASEHLAE-------------HEPMVR 183

Query: 165 ---RRAVTEFCGNVELCRLTEQVVFSDPYRVS 193
              RRAV  F        L +Q+++  P+ V+
Sbjct: 184 ELVRRAVNRFIDTGR-ADLVDQMIWEVPFTVA 214


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.314    0.132    0.362 

Lambda     K      H
   0.267   0.0403    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,681,140
Number of Sequences: 36641
Number of extensions: 622649
Number of successful extensions: 1559
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1533
Number of HSP's gapped (non-prelim): 33
length of query: 420
length of database: 10,336,785
effective HSP length: 100
effective length of query: 320
effective length of database: 6,672,685
effective search space: 2135259200
effective search space used: 2135259200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 60 (27.7 bits)