BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9BY32 (194 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2J4E-A nrPDB 399 e-112 2ZTI-A nrPDB 103 6e-23 1B78-A nrPDB 101 2e-22 1VP2-A nrPDB 77 4e-15 3TQU-A nrPDB 75 2e-14 4BNQ-A nrPDB 70 7e-13 2Q16-A nrPDB 64 5e-11 2A5V-A nrPDB 30 0.77 4G3E-A nrPDB 29 1.3 1XI9-A nrPDB 28 2.9 5BWL-A nrPDB 28 3.0 2ZY2-A nrPDB 27 4.0 2OOF-A nrPDB 27 4.6 4WJA-A nrPDB 26 9.5 >2J4E-A nrPDB Length = 196 Score = 399 bits (1025), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MAASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEA 60 MAASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEA Sbjct: 3 MAASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEA 62 Query: 61 VRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFAL 120 VRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFAL Sbjct: 63 VRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFAL 122 Query: 121 STGDPSQPVRLFRGRTSGRIVAPRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFR 180 STGDPSQPVRLFRGRTSGRIVAPRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFR Sbjct: 123 STGDPSQPVRLFRGRTSGRIVAPRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFR 182 Query: 181 ALLELQEYFGSLAA 194 ALLELQEYFGSLAA Sbjct: 183 ALLELQEYFGSLAA 196 >2ZTI-A nrPDB Length = 186 Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 66/182 (36%), Positives = 92/182 (50%), Gaps = 6/182 (3%) Query: 9 KIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVR-QVQGP 67 KI F+T N K+ EV LG F +V K + PE Q E E + ++ +V P Sbjct: 2 KIFFITSNPGKVREVANFLGT-FGIEIVQLKHEYPEIQAEKLEDVVDFGISWLKGKVPEP 60 Query: 68 VLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALSTGDPSQ 127 ++ED+ L +L G PG Y + + EG+ +L+ G ED+ AY + Sbjct: 61 FMIEDSGLFIESLKGFPGVYSSYVYRTIGLEGILKLMEGAEDRRAYFKSVIGFYIDGKAY 120 Query: 128 PVRLFRGRTSGRIVA-PRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQ 186 F G T GRI RG FG+DP F P+G E+T+AEM EKNA+SHR +AL Sbjct: 121 K---FSGVTWGRISNEKRGTHGFGYDPIFIPEGSEKTFAEMTIEEKNALSHRGKALKAFF 177 Query: 187 EY 188 E+ Sbjct: 178 EW 179 >1B78-A nrPDB Length = 193 Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 5/182 (2%) Query: 9 KIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGPV 68 KI F TGN K++E IL D + KI PE QG +E++ + ++ PV Sbjct: 10 KIYFATGNPNKIKEANIILKDLKDVEIEQIKISYPEIQGTLEEVAEFGAKWVYNILKKPV 69 Query: 69 LVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALSTGDPSQP 128 +VED+ AL G PG Y K+ E + EG+ +LL G ++++AY Sbjct: 70 IVEDSGFFVEALNGFPGTYSKFVQETIGNEGILKLLEGKDNRNAYFKTVIGYC---DENG 126 Query: 129 VRLFRGRTSGRIVAPRGCQDFG--WDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQ 186 VRLF+G GR+ + +G +D F P+ E+T+AEM EK+ +SHR +A E + Sbjct: 127 VRLFKGIVKGRVSEEIRSKGYGFAYDSIFIPEEEERTFAEMTTEEKSQISHRKKAFEEFK 186 Query: 187 EY 188 ++ Sbjct: 187 KF 188 >1VP2-A nrPDB Length = 208 Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 4/179 (2%) Query: 10 IVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGPVL 69 + T N K+EE+ I + +KI++ E E S++K ++++ PV+ Sbjct: 18 VYLATTNPHKVEEIKMIAPEWMEILPSPEKIEVVEDGETFLENSVKKAVVYGKKLKHPVM 77 Query: 70 VEDTCLCFNALGGLPGPYIKWFLEKLK-PEGLHQLLAGFEDKSAYALCTFALSTGDPSQP 128 +D+ L +LGG PG F+E+ E + +L E K A + + DP + Sbjct: 78 ADDSGLVIYSLGGFPGVMSARFMEEHSYKEKMRTILKMLEGKDRRAAFVCSATFFDPVEN 137 Query: 129 VRL-FRGRTSGRIVAP-RGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLEL 185 + R GRI RG FG+DP F PDGY++T+ E+P K +SHR +A +L Sbjct: 138 TLISVEDRVEGRIANEIRGTGGFGYDPFFIPDGYDKTFGEIPHL-KEKISHRSKAFRKL 195 >3TQU-A nrPDB Length = 203 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 11/188 (5%) Query: 9 KIVFVTGNAKKLEEVVQILGD---KFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQ 65 +IV + N+ KL E+ ++L D KF D+ E E +I K + A +Q Sbjct: 6 EIVLASQNSSKLAEMQELLRDLEIKFIPQTEFSVPDIEETGSTFVENAIIKARHAAKQTG 65 Query: 66 GPVLVEDTCLCFNALGGLPGPYIKWFLEK--LKPEGLHQLLAGFE-----DKSAYALCTF 118 P L +D+ L AL PG + + K E + ++L E D+SA C Sbjct: 66 LPALADDSGLTIAALNSAPGVFSSRYAGKNATDAERIQKVLEALEAADDSDRSASFHCVI 125 Query: 119 ALSTGDPSQPVRLFRGRTSGRIV-APRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSH 177 AL + + G G I PRG FG+DP F +++T AE+ EKNA+SH Sbjct: 126 ALMENENDPAPLICHGVWEGEIAREPRGKNGFGYDPIFYVPSHQRTAAELDPQEKNAISH 185 Query: 178 RFRALLEL 185 R +AL +L Sbjct: 186 RGQALEQL 193 >4BNQ-A nrPDB Length = 195 Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%) Query: 8 KKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKI---DLPEYQGEPDEISIQKCQEAVRQV 64 K+IV + N K+ + I D + +++ I D+ E +E +I K + A + + Sbjct: 2 KEIVIASNNQGKINDFKVIFPD-YHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL 60 Query: 65 QGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKP-----EGLHQLLAGFEDKSAYALCTFA 119 V+ +D+ L AL G PG Y + + K E L L D+ A +C + Sbjct: 61 NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS 120 Query: 120 LSTGDPSQPVRLFRGRTSGRIVAPR-GCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHR 178 +S P ++F+G SG I + G FG+DP F ++T A++ K +K +SHR Sbjct: 121 MSG--PDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHR 178 Query: 179 FRALLELQEYF 189 A+ LQ + Sbjct: 179 RNAINLLQAFL 189 >2Q16-A nrPDB Length = 219 Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 15/188 (7%) Query: 8 KKIVFVTGNAKKLEEVVQILGDKFPCTLVAQK---IDLPEYQGEP-DEISIQKCQEAVRQ 63 +K+V TGN K+ E+ +L D F +VAQ +D E G E +I K + A + Sbjct: 22 QKVVLATGNVGKVRELASLLSD-FGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKV 80 Query: 64 VQGPVLVEDTCLCFNALGGLPGPYIKWFL--EKLKPEGLHQLLAGFED-----KSAYALC 116 P + + + L + LGG PG Y + + + L +LL +D + A C Sbjct: 81 TALPAIADASGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHC 140 Query: 117 TFA-LSTGDPSQPVRLFRGRTSGRIV-APRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNA 174 L + P+ + G G I P G FG+DP F +T AE+ + EK+A Sbjct: 141 VLVYLRHAEDPTPL-VCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSA 199 Query: 175 VSHRFRAL 182 +SHR +AL Sbjct: 200 ISHRGQAL 207 >2A5V-A nrPDB Length = 213 Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 20/102 (19%) Query: 10 IVFVTGNAKKLEEVV--QILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGP 67 ++F +++ E++ Q LGD F ID + + AV + P Sbjct: 53 VIFGCADSRVAAEIIFDQGLGDMFVVRTAGHVID---------SAVLGSIEYAVTVLNVP 103 Query: 68 VLV---EDTCLCFNAL------GGLPGPYIKWFLEKLKPEGL 100 ++V D+C NA G LPG Y++ +E++ P L Sbjct: 104 LIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVL 145 >4G3E-A nrPDB Length = 352 Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%) Query: 85 GPYIKWFLEKLKPEGLHQLLAGF----EDKSAYALCTFALSTGDPSQPVRLFRG--RTSG 138 GP++ F+E L+ L QL+ ED++ Y L AL + R+ G + Sbjct: 138 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQ-ALEGLEYLHTRRILHGDVKADN 196 Query: 139 RIVAPRGCQ----DFGWDPCFQPDG 159 +++ G + DFG C QPDG Sbjct: 197 VLLSSDGSRAALCDFGHALCLQPDG 221 >1XI9-A nrPDB Length = 406 Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Query: 51 EISIQKCQEAVRQVQGPVLVEDTCLCFNALGGLPGP--YIKWFLEKLK 96 E + + +EA+ ++ L +T F A+ GL GP Y+K +++KLK Sbjct: 263 ENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLK 310 >5BWL-A nrPDB Length = 290 Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 33/153 (21%) Query: 7 GKKIVFVTGNAKKL------EEVVQILGDKF-----PCTLVAQKIDLP-----EYQGEPD 50 G+++V +T N +L + +++I G F C +VA+ P +G P Sbjct: 120 GRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAP- 178 Query: 51 EISIQKCQEAVRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDK 110 E Q V ++ P E C GGL P++ WF E L P L ++ D+ Sbjct: 179 EPGTQDASIPVEKL--PRCEEAGC------GGLLRPHVVWFGENLDPAILEEV-----DR 225 Query: 111 SAYALCTFALSTGDPS--QPVRLFRGRTSGRIV 141 A C L G S P +F + + R V Sbjct: 226 E-LAHCDLCLVVGTSSVVYPAAMFAPQVAARGV 257 >2ZY2-A nrPDB Length = 544 Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust. Identities = 8/24 (33%), Positives = 18/24 (75%) Query: 160 YEQTYAEMPKAEKNAVSHRFRALL 183 ++ +++P++ K A+ HR+R+LL Sbjct: 334 FDHALSQLPESAKKALDHRYRSLL 357 >2OOF-A nrPDB Length = 416 Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Query: 19 KLEEVVQILGDKFP----CTLVAQKIDLPEYQGEPDEISIQKCQEAV 61 K+ V + LG+ P TL+A PEY+ +PD CQE + Sbjct: 153 KMLRVARRLGEALPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEII 199 >4WJA-A nrPDB Length = 161 Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust. Identities = 12/36 (33%), Positives = 15/36 (41%) Query: 151 WDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQ 186 W CF PD A + ++ RFRA E Q Sbjct: 64 WSTCFTPDSLAALKARFGLSAAEDITPRFRAACEQQ 99 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2J4E-A nrPDB 290 2e-79 3TQU-A nrPDB 230 2e-61 2ZTI-A nrPDB 229 5e-61 1B78-A nrPDB 229 7e-61 1VP2-A nrPDB 222 1e-58 2Q16-A nrPDB 218 1e-57 4BNQ-A nrPDB 216 6e-57 Sequences not found previously or not previously below threshold: 2VBI-A nrPDB 31 0.28 6CG0-A nrPDB 29 1.00 5ZDZ-A nrPDB 29 1.00 1ZNO-A nrPDB 29 1.2 4KSO-C nrPDB 29 1.8 1OJM-A nrPDB 28 2.7 3JBW-A nrPDB 28 3.1 5YAC-A nrPDB 28 3.5 5NA1-A nrPDB 27 3.8 5EQX-A nrPDB 27 4.3 3K44-A nrPDB 27 4.8 CONVERGED! >2J4E-A nrPDB Length = 196 Score = 290 bits (743), Expect = 2e-79, Method: Composition-based stats. Identities = 194/194 (100%), Positives = 194/194 (100%) Query: 1 MAASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEA 60 MAASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEA Sbjct: 3 MAASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEA 62 Query: 61 VRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFAL 120 VRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFAL Sbjct: 63 VRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFAL 122 Query: 121 STGDPSQPVRLFRGRTSGRIVAPRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFR 180 STGDPSQPVRLFRGRTSGRIVAPRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFR Sbjct: 123 STGDPSQPVRLFRGRTSGRIVAPRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFR 182 Query: 181 ALLELQEYFGSLAA 194 ALLELQEYFGSLAA Sbjct: 183 ALLELQEYFGSLAA 196 >3TQU-A nrPDB Length = 203 Score = 230 bits (587), Expect = 2e-61, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 11/188 (5%) Query: 9 KIVFVTGNAKKLEEVVQILGD---KFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQ 65 +IV + N+ KL E+ ++L D KF D+ E E +I K + A +Q Sbjct: 6 EIVLASQNSSKLAEMQELLRDLEIKFIPQTEFSVPDIEETGSTFVENAIIKARHAAKQTG 65 Query: 66 GPVLVEDTCLCFNALGGLPGPYIKWFLEK--LKPEGLHQLLAGFE-----DKSAYALCTF 118 P L +D+ L AL PG + + K E + ++L E D+SA C Sbjct: 66 LPALADDSGLTIAALNSAPGVFSSRYAGKNATDAERIQKVLEALEAADDSDRSASFHCVI 125 Query: 119 ALSTGDPSQPVRLFRGRTSGRIV-APRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSH 177 AL + + G G I PRG FG+DP F +++T AE+ EKNA+SH Sbjct: 126 ALMENENDPAPLICHGVWEGEIAREPRGKNGFGYDPIFYVPSHQRTAAELDPQEKNAISH 185 Query: 178 RFRALLEL 185 R +AL +L Sbjct: 186 RGQALEQL 193 >2ZTI-A nrPDB Length = 186 Score = 229 bits (585), Expect = 5e-61, Method: Composition-based stats. Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 6/183 (3%) Query: 9 KIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVR-QVQGP 67 KI F+T N K+ EV LG F +V K + PE Q E E + ++ +V P Sbjct: 2 KIFFITSNPGKVREVANFLGT-FGIEIVQLKHEYPEIQAEKLEDVVDFGISWLKGKVPEP 60 Query: 68 VLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALSTGDPSQ 127 ++ED+ L +L G PG Y + + EG+ +L+ G ED+ AY + Sbjct: 61 FMIEDSGLFIESLKGFPGVYSSYVYRTIGLEGILKLMEGAEDRRAYFKSVIGFYIDGKAY 120 Query: 128 PVRLFRGRTSGRIVAP-RGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQ 186 F G T GRI RG FG+DP F P+G E+T+AEM EKNA+SHR +AL Sbjct: 121 K---FSGVTWGRISNEKRGTHGFGYDPIFIPEGSEKTFAEMTIEEKNALSHRGKALKAFF 177 Query: 187 EYF 189 E+ Sbjct: 178 EWL 180 >1B78-A nrPDB Length = 193 Score = 229 bits (583), Expect = 7e-61, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 5/183 (2%) Query: 9 KIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGPV 68 KI F TGN K++E IL D + KI PE QG +E++ + ++ PV Sbjct: 10 KIYFATGNPNKIKEANIILKDLKDVEIEQIKISYPEIQGTLEEVAEFGAKWVYNILKKPV 69 Query: 69 LVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALSTGDPSQP 128 +VED+ AL G PG Y K+ E + EG+ +LL G ++++AY Sbjct: 70 IVEDSGFFVEALNGFPGTYSKFVQETIGNEGILKLLEGKDNRNAYFKTVIGYC---DENG 126 Query: 129 VRLFRGRTSGRIVAPRGCQDFG--WDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQ 186 VRLF+G GR+ + +G +D F P+ E+T+AEM EK+ +SHR +A E + Sbjct: 127 VRLFKGIVKGRVSEEIRSKGYGFAYDSIFIPEEEERTFAEMTTEEKSQISHRKKAFEEFK 186 Query: 187 EYF 189 ++ Sbjct: 187 KFL 189 >1VP2-A nrPDB Length = 208 Score = 222 bits (565), Expect = 1e-58, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 4/183 (2%) Query: 10 IVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGPVL 69 + T N K+EE+ I + +KI++ E E S++K ++++ PV+ Sbjct: 18 VYLATTNPHKVEEIKMIAPEWMEILPSPEKIEVVEDGETFLENSVKKAVVYGKKLKHPVM 77 Query: 70 VEDTCLCFNALGGLPGPYIKWFLEKLK-PEGLHQLLAGFEDKSAYALCTFALSTGDPSQP 128 +D+ L +LGG PG F+E+ E + +L E K A + + DP + Sbjct: 78 ADDSGLVIYSLGGFPGVMSARFMEEHSYKEKMRTILKMLEGKDRRAAFVCSATFFDPVEN 137 Query: 129 VRL-FRGRTSGRIVAP-RGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQ 186 + R GRI RG FG+DP F PDGY++T+ E+P K +SHR +A +L Sbjct: 138 TLISVEDRVEGRIANEIRGTGGFGYDPFFIPDGYDKTFGEIPHL-KEKISHRSKAFRKLF 196 Query: 187 EYF 189 Sbjct: 197 SVL 199 >2Q16-A nrPDB Length = 219 Score = 218 bits (555), Expect = 1e-57, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 13/190 (6%) Query: 8 KKIVFVTGNAKKLEEVVQILGDKFPCTLVAQK---IDLPEYQG-EPDEISIQKCQEAVRQ 63 +K+V TGN K+ E+ +L D F +VAQ +D E G E +I K + A + Sbjct: 22 QKVVLATGNVGKVRELASLLSD-FGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKV 80 Query: 64 VQGPVLVEDTCLCFNALGGLPGPYIKWFLEK--LKPEGLHQLLAGFED-----KSAYALC 116 P + + + L + LGG PG Y + + + L +LL +D + A C Sbjct: 81 TALPAIADASGLAVDVLGGAPGIYSARYSGEDATDQKNLQKLLETMKDVPDDQRQARFHC 140 Query: 117 TFALSTGDPSQPVRLFRGRTSGRIV-APRGCQDFGWDPCFQPDGYEQTYAEMPKAEKNAV 175 + G G I P G FG+DP F +T AE+ + EK+A+ Sbjct: 141 VLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIFFVPSEGKTAAELTREEKSAI 200 Query: 176 SHRFRALLEL 185 SHR +AL L Sbjct: 201 SHRGQALKLL 210 >4BNQ-A nrPDB Length = 195 Score = 216 bits (549), Expect = 6e-57, Method: Composition-based stats. Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 12/191 (6%) Query: 8 KKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKI---DLPEYQGEPDEISIQKCQEAVRQV 64 K+IV + N K+ + I D + +++ I D+ E +E +I K + A + + Sbjct: 2 KEIVIASNNQGKINDFKVIFPD-YHVIGISELIPDFDVEETGSTFEENAILKSEAAAKAL 60 Query: 65 QGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKP-----EGLHQLLAGFEDKSAYALCTFA 119 V+ +D+ L AL G PG Y + + K E L L D+ A +C + Sbjct: 61 NKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVIS 120 Query: 120 LSTGDPSQPVRLFRGRTSGRIVAPR-GCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHR 178 +S P ++F+G SG I + G FG+DP F ++T A++ K +K +SHR Sbjct: 121 MS--GPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHR 178 Query: 179 FRALLELQEYF 189 A+ LQ + Sbjct: 179 RNAINLLQAFL 189 >2VBI-A nrPDB Length = 566 Score = 31.2 bits (69), Expect = 0.28, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 32/109 (29%), Gaps = 20/109 (18%) Query: 35 LVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEK 94 V+ + PE + ++ + + PV++ + K Sbjct: 180 PVSSLLSEPEIDHTSLKAAVDATVALLEKSASPVMLLGS--------------------K 219 Query: 95 LKPEGLHQLLAGFEDKSAYALCTFALSTGDPSQPVRLFRGRTSGRIVAP 143 L+ DK A+ A + G + FRG G + P Sbjct: 220 LRAANALAATETLADKLQCAVTIMAAAKGFFPEDHAGFRGLYWGEVSNP 268 >6CG0-A nrPDB Length = 775 Score = 29.3 bits (64), Expect = 1.00, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 67 PVLVE-----DTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALS 121 P++ E + L +GG+P + F E L + + G E + +CT + Sbjct: 410 PLIAEREAMKSSELTLE-MGGIPRTFKFIFRGTGYDEKLVREVEGLEASGSVYICTLCDT 468 Query: 122 TGDPSQPVRLFRGRT 136 T + +F T Sbjct: 469 TRLEASQNLVFHSIT 483 >5ZDZ-A nrPDB Length = 627 Score = 29.3 bits (64), Expect = 1.00, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 6/75 (8%) Query: 67 PVLVE-----DTCLCFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALS 121 P++ E + L +GG+P + F E L + + G E + +CT + Sbjct: 293 PLIAEREAMKSSELTLE-MGGIPRTFKFIFRGTGYDEKLVREVEGLEASGSVYICTLCDT 351 Query: 122 TGDPSQPVRLFRGRT 136 T + +F T Sbjct: 352 TRLEASQNLVFHSIT 366 >1ZNO-A nrPDB Length = 183 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 8/69 (11%) Query: 6 VGKKIVFVTGNAKKLEEVVQILGDKFP--------CTLVAQKIDLPEYQGEPDEISIQKC 57 V +KI+ + N K+ V FP ++ ++ D P E + ++ + Sbjct: 9 VMRKIIIASQNPAKVNAVRSAFSTVFPDQEWEFIGVSVPSEVADQPMSDEETKQGALNRV 68 Query: 58 QEAVRQVQG 66 + A ++ G Sbjct: 69 RNAKQRHPG 77 >4KSO-C nrPDB Length = 102 Score = 28.5 bits (62), Expect = 1.8, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 3/63 (4%) Query: 9 KIVFVTGNAKKLE---EVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQ 65 K+ + + IL +F + ID+ + +E I + + Sbjct: 10 KLYVAGNTPNSVRALKTLKNILEVEFQGVYALKVIDVLKNPQLAEEDKILATPTLAKVLP 69 Query: 66 GPV 68 PV Sbjct: 70 LPV 72 >1OJM-A nrPDB Length = 729 Score = 28.1 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 7/55 (12%) Query: 2 AASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQK 56 AA+ + ++ + N K+ + DK +K D PE Q E S K Sbjct: 523 AATTIDQR-KLESSNPYKV-----YVNDKEASLTEQEK-DYPETQSVFLESSDSK 570 >3JBW-A nrPDB Length = 764 Score = 27.8 bits (60), Expect = 3.1, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 4/75 (5%) Query: 66 GPVLVEDTCL----CFNALGGLPGPYIKWFLEKLKPEGLHQLLAGFEDKSAYALCTFALS 121 GPV+ E + ++GGL + +F E + + + G E + +CT S Sbjct: 428 GPVVAERKAMMESRLIISVGGLLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDS 487 Query: 122 TGDPSQPVRLFRGRT 136 T + + T Sbjct: 488 TRAEASQNMVLHSIT 502 >5YAC-A nrPDB Length = 346 Score = 27.8 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Query: 18 KKLEEVVQILGDKFPCTLVAQKI--DLPEYQGEPDEISI 54 K+ VV ILGD + A +I +LP+Y E E +I Sbjct: 243 NKVNNVVPILGDSREIEVKADRIIMNLPKYAHEFLEHAI 281 >5NA1-A nrPDB Length = 408 Score = 27.4 bits (59), Expect = 3.8, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 11/56 (19%) Query: 132 FRGRTSGRIVAPRGCQDFGWDPC--------FQPDGYEQ---TYAEMPKAEKNAVS 176 F G GRIV + G+D F P G E+ T A++ + +V+ Sbjct: 281 FEGVKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVA 336 >5EQX-A nrPDB Length = 555 Score = 27.4 bits (59), Expect = 4.3, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 25/76 (32%) Query: 11 VFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQGPVLV 70 F +GN E+ V + +D + Q I+++ E + V V Sbjct: 257 FFTSGNEGNWFEIQTDPRTNEGILKVVKALDYEQLQSVKLSIAVKNKAEFHQSVISRYRV 316 Query: 71 EDTCLCFNALGGLPGP 86 + T + + G Sbjct: 317 QSTPVTIQVINVREGI 332 >3K44-A nrPDB Length = 146 Score = 27.0 bits (58), Expect = 4.8, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 19/58 (32%) Query: 9 KIVFVTGNAKKLEEVVQILGDKFPCTLVAQKIDLPEYQGEPDEISIQKCQEAVRQVQG 66 +I A + + + D + +LPE E+ I+ + ++ Sbjct: 43 QIYLALSTAAEFRDHLSSFSDYYASLGPPNTDNLPEDGKLKSEMMIKDYRRYYLDLKE 100 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.130 0.325 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,698,053 Number of Sequences: 36641 Number of extensions: 249519 Number of successful extensions: 734 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 685 Number of HSP's gapped (non-prelim): 38 length of query: 194 length of database: 10,336,785 effective HSP length: 92 effective length of query: 102 effective length of database: 6,965,813 effective search space: 710512926 effective search space used: 710512926 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 56 (26.2 bits)