BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9BUP3 (242 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2BKA-A nrPDB 496 e-141 2FMU-A nrPDB 423 e-119 4XWN-A nrPDB 33 0.13 1HE4-A nrPDB 32 0.17 3WSO-A nrPDB 31 0.50 2Q4B-A nrPDB 30 0.97 3RKU-A nrPDB 29 2.3 2CVO-A nrPDB 28 3.8 5BNZ-A nrPDB 28 4.3 5K3J-A nrPDB 28 5.0 2L19-A nrPDB 28 5.2 1TKI-A nrPDB 27 9.5 >2BKA-A nrPDB Length = 242 Score = 496 bits (1276), Expect = e-141, Method: Compositional matrix adjust. Identities = 242/242 (100%), Positives = 242/242 (100%) Query: 1 MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE 60 MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE Sbjct: 1 MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE 60 Query: 61 AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK 120 AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK Sbjct: 61 AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK 120 Query: 121 AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPG 180 AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPG Sbjct: 121 AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPG 180 Query: 181 EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAHGSL 240 EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAHGSL Sbjct: 181 EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAHGSL 240 Query: 241 KP 242 KP Sbjct: 241 KP 242 >2FMU-A nrPDB Length = 248 Score = 423 bits (1088), Expect = e-119, Method: Compositional matrix adjust. Identities = 208/229 (90%), Positives = 216/229 (94%) Query: 7 LSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN 66 L KLREDF+MQNKSVFILGASGETG+VLLKEIL Q LFSKVTLIGRRKLTF+EEAYKNVN Sbjct: 13 LPKLREDFKMQNKSVFILGASGETGKVLLKEILGQNLFSKVTLIGRRKLTFEEEAYKNVN 72 Query: 67 QEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKH 126 QEVVDFEKLD YASAFQGHDVGFCCLGTTR KAGAEGFVRVDRDYVLKSAELAKAGGCKH Sbjct: 73 QEVVDFEKLDVYASAFQGHDVGFCCLGTTRSKAGAEGFVRVDRDYVLKSAELAKAGGCKH 132 Query: 127 FNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRK 186 FNLLSS+GADKSS+FLYLQVKGEVEAKVEELKFDR SVFRPGVLLCDRQESRPGEWL RK Sbjct: 133 FNLLSSRGADKSSSFLYLQVKGEVEAKVEELKFDRLSVFRPGVLLCDRQESRPGEWLARK 192 Query: 187 FFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGK 235 FFGSLPDSWASG++VPVVTVVRAMLNN+V P QMELLENKAI LGK Sbjct: 193 FFGSLPDSWASGYAVPVVTVVRAMLNNLVSPSSGQMELLENKAILHLGK 241 >4XWN-A nrPDB Length = 681 Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust. Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 9/92 (9%) Query: 6 ALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV 65 A+++ R DF+ N+SV+I SG TG++ ++++ G T + R + ++ NV Sbjct: 584 AVTETRNDFKRFNQSVYI--PSGWTGKMPNGDVIQSG----ATFLSIRSKYKQDPSWPNV 637 Query: 66 NQEVVDFEKLDDYASAFQGHD---VGFCCLGT 94 + + +D F G + F GT Sbjct: 638 EAALANGTGVDMTYHRFWGQSDIAIAFGTYGT 669 >1HE4-A nrPDB Length = 206 Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Query: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL 75 M K + I GA+G+TG L + ++ G +VT++ R E + + V D + Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58 Query: 76 DDYASAFQGHDVGFCCLGT 94 D G D LGT Sbjct: 59 ADVDKTVAGQDAVIVLLGT 77 >3WSO-A nrPDB Length = 255 Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 31/68 (45%) Query: 98 KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEEL 157 K EGF+ D D + ++ H NLL + A++ F L V G E KVE+L Sbjct: 50 KCLREGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDL 109 Query: 158 KFDRYSVF 165 D+ F Sbjct: 110 SRDQRKEF 117 >2Q4B-A nrPDB Length = 253 Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 37/181 (20%) Query: 20 SVFILGASGETGRVLLKEILE-------QGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDF 72 +V + GASG TG+++ K++ E +GL G+ K+ + + + + D Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKIGGEADVF------IGDI 57 Query: 73 EKLDDYASAFQGHD--------VGFCCLGTTRGKAGAEGFVRVDRDYVLK--------SA 116 D AFQG D V G K G F+ D Y + Sbjct: 58 TDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQI 117 Query: 117 ELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEV---EAKVEELKFDR---YSVFRPGVL 170 + AK G KH ++ S G + L G + + K E+ D Y++ R G L Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177 Query: 171 L 171 L Sbjct: 178 L 178 >3RKU-A nrPDB Length = 287 Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 26/54 (48%) Query: 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQE 68 R+ K+V I GAS G+ E LE ++ R+L EE K ++QE Sbjct: 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE 83 >2CVO-A nrPDB Length = 366 Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Query: 21 VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL--TFDEEAYKNVNQEVVDFEKLDDY 78 + +LGASG TG +++ + F + RK F + Q++ + + D Sbjct: 26 IAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKD- 84 Query: 79 ASAFQGHDVGFCCL--GTTR 96 + F D FCCL GTT+ Sbjct: 85 -ADFSNVDAVFCCLPHGTTQ 103 >5BNZ-A nrPDB Length = 564 Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 160 DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASG 198 DR+ R G + D ++SRPG+ + + +L DSW G Sbjct: 527 DRFQFEREGYFVADLKDSRPGKPVFNRTV-TLRDSWGQG 564 >5K3J-A nrPDB Length = 674 Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 75 LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG 134 + Y S G +G C T +++ R Y++KS EL KAG K ++S Sbjct: 414 MASYISVVYGIAIGGC----TYAGENMVMLLQLAR-YLVKSVELIKAGKAKKLGPVASYL 468 Query: 135 ADKS 138 ADKS Sbjct: 469 ADKS 472 >2L19-A nrPDB Length = 134 Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust. Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 3/68 (4%) Query: 144 LQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPV 203 + + G+ +E D Y V + LC + P EW+ ++ F G S+ V Sbjct: 58 IDISGQTSDPIENFNADDYDVV---ISLCGSGVNLPPEWVTQEIFEDWQLEDPDGQSLEV 114 Query: 204 VTVVRAML 211 VR + Sbjct: 115 FRTVRGQV 122 >1TKI-A nrPDB Length = 321 Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust. Identities = 10/17 (58%), Positives = 14/17 (82%) Query: 56 TFDEEAYKNVNQEVVDF 72 TFDEEA+K ++ E +DF Sbjct: 221 TFDEEAFKEISIEAMDF 237 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2BKA-A nrPDB 474 e-134 2FMU-A nrPDB 445 e-125 Sequences not found previously or not previously below threshold: 3RKU-A nrPDB 30 0.70 5BNZ-A nrPDB 30 1.2 4XWN-A nrPDB 30 1.3 3WSO-A nrPDB 29 1.9 1HE4-A nrPDB 28 3.3 5K3J-A nrPDB 28 4.0 5AWX-A nrPDB 28 4.1 2Q4B-A nrPDB 28 4.1 4LGW-A nrPDB 28 4.3 2P0A-A nrPDB 27 6.1 1TKI-A nrPDB 27 8.7 CONVERGED! >2BKA-A nrPDB Length = 242 Score = 474 bits (1220), Expect = e-134, Method: Composition-based stats. Identities = 242/242 (100%), Positives = 242/242 (100%) Query: 1 MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE 60 MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE Sbjct: 1 MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE 60 Query: 61 AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK 120 AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK Sbjct: 61 AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK 120 Query: 121 AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPG 180 AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPG Sbjct: 121 AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPG 180 Query: 181 EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAHGSL 240 EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAHGSL Sbjct: 181 EWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGKAHGSL 240 Query: 241 KP 242 KP Sbjct: 241 KP 242 >2FMU-A nrPDB Length = 248 Score = 445 bits (1144), Expect = e-125, Method: Composition-based stats. Identities = 208/229 (90%), Positives = 216/229 (94%) Query: 7 LSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN 66 L KLREDF+MQNKSVFILGASGETG+VLLKEIL Q LFSKVTLIGRRKLTF+EEAYKNVN Sbjct: 13 LPKLREDFKMQNKSVFILGASGETGKVLLKEILGQNLFSKVTLIGRRKLTFEEEAYKNVN 72 Query: 67 QEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKH 126 QEVVDFEKLD YASAFQGHDVGFCCLGTTR KAGAEGFVRVDRDYVLKSAELAKAGGCKH Sbjct: 73 QEVVDFEKLDVYASAFQGHDVGFCCLGTTRSKAGAEGFVRVDRDYVLKSAELAKAGGCKH 132 Query: 127 FNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRK 186 FNLLSS+GADKSS+FLYLQVKGEVEAKVEELKFDR SVFRPGVLLCDRQESRPGEWL RK Sbjct: 133 FNLLSSRGADKSSSFLYLQVKGEVEAKVEELKFDRLSVFRPGVLLCDRQESRPGEWLARK 192 Query: 187 FFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLENKAIHDLGK 235 FFGSLPDSWASG++VPVVTVVRAMLNN+V P QMELLENKAI LGK Sbjct: 193 FFGSLPDSWASGYAVPVVTVVRAMLNNLVSPSSGQMELLENKAILHLGK 241 >3RKU-A nrPDB Length = 287 Score = 30.3 bits (67), Expect = 0.70, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%) Query: 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQE 68 R+ K+V I GAS G+ E LE ++ R+L EE K ++QE Sbjct: 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE 83 >5BNZ-A nrPDB Length = 564 Score = 29.6 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 160 DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASG 198 DR+ R G + D ++SRPG+ + + +L DSW G Sbjct: 527 DRFQFEREGYFVADLKDSRPGKPVFNRTV-TLRDSWGQG 564 >4XWN-A nrPDB Length = 681 Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 9/92 (9%) Query: 6 ALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV 65 A+++ R DF+ N+SV+I SG TG++ ++++ G T + R + ++ NV Sbjct: 584 AVTETRNDFKRFNQSVYI--PSGWTGKMPNGDVIQSG----ATFLSIRSKYKQDPSWPNV 637 Query: 66 NQEVVDFEKLDDYASAFQGHD---VGFCCLGT 94 + + +D F G + F GT Sbjct: 638 EAALANGTGVDMTYHRFWGQSDIAIAFGTYGT 669 >3WSO-A nrPDB Length = 255 Score = 29.2 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 30/64 (46%) Query: 102 EGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDR 161 EGF+ D D + ++ H NLL + A++ F L V G E KVE+L D+ Sbjct: 54 EGFITEDWDQPVADWKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQ 113 Query: 162 YSVF 165 F Sbjct: 114 RKEF 117 >1HE4-A nrPDB Length = 206 Score = 28.4 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Query: 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL 75 M K + I GA+G+TG L + ++ G +VT++ R E + + V D + Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA 58 Query: 76 DDYASAFQGHDVGFCCLGT 94 D G D LGT Sbjct: 59 ADVDKTVAGQDAVIVLLGT 77 >5K3J-A nrPDB Length = 674 Score = 28.0 bits (61), Expect = 4.0, Method: Composition-based stats. Identities = 21/72 (29%), Positives = 31/72 (43%) Query: 111 YVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVL 170 Y++KS EL KAG K ++S ADKS + G V+ + + + Sbjct: 445 YLVKSVELIKAGKAKKLGPVASYLADKSDETDLTSLNGYVKMFENMARRQAWKATEKFLK 504 Query: 171 LCDRQESRPGEW 182 L + ESR W Sbjct: 505 LMESGESREVAW 516 >5AWX-A nrPDB Length = 298 Score = 28.0 bits (61), Expect = 4.1, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 11/117 (9%) Query: 98 KAGAEGFVRV----DRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAK 153 K+ AE F R+ + + ++ L + G K + G+++ NFL Q +V A Sbjct: 103 KSTAEDFWRMIWEHNVEVIVMITNLVEKGRRKCDQYWPADGSEEYGNFLVTQKSVQVLAY 162 Query: 154 VEELKFD-RYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVR 208 F R + + G Q+ RP G + + + PD +S+PV+T VR Sbjct: 163 YTVRNFTLRNTKIKKG-----SQKGRPSGRVVTQYHYTQWPDMGVPEYSLPVLTFVR 214 >2Q4B-A nrPDB Length = 253 Score = 28.0 bits (61), Expect = 4.1, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 67/179 (37%), Gaps = 33/179 (18%) Query: 20 SVFILGASGETGRVLLKEIL-EQGLFSKVTLI----GRRKLTFDEEAYKNVNQEVVDFEK 74 +V + GASG TG+++ K++ F L+ G+ K+ + + + + D Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVF------IGDITD 59 Query: 75 LDDYASAFQGHDVGFCCL--------GTTRGKAGAEGFVRVDRDYVLK--------SAEL 118 D AFQG D G K G F+ D Y + + Sbjct: 60 ADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDA 119 Query: 119 AKAGGCKHFNLLSSKGADKSSNFLYLQVKGEV---EAKVEELKFDR---YSVFRPGVLL 171 AK G KH ++ S G + L G + + K E+ D Y++ R G LL Sbjct: 120 AKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLL 178 >4LGW-A nrPDB Length = 248 Score = 28.0 bits (61), Expect = 4.3, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 14/71 (19%) Query: 145 QVKGEVEAKVEELKFDRYSVFRPGVLLCDRQE---SRPGEWLVRKFFGSLPDSWASGHSV 201 +V E+E + ++L++D YS LC R +RP F+ + P++W S + Sbjct: 25 EVYHEIELQAQQLEYDYYS-------LCVRHPVPFTRP----KVAFYTNYPEAWVSYYQA 73 Query: 202 PVVTVVRAMLN 212 + +LN Sbjct: 74 KNFLAIDPVLN 84 >2P0A-A nrPDB Length = 344 Score = 27.2 bits (59), Expect = 6.1, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 136 DKSSNFLYLQVKGEVEAKVEELKFDRYSV--FRPGVLLCDRQESRPGEWLVRKFF 188 D S F +V GE+E +VE+ +F ++ + G + D Q R G +V + F Sbjct: 30 DWSKYFHGKKVNGEIEIRVEQAEFSELNLAAYVTGGCMVDMQVVRNGTKVVSRSF 84 >1TKI-A nrPDB Length = 321 Score = 26.9 bits (58), Expect = 8.7, Method: Composition-based stats. Identities = 10/17 (58%), Positives = 14/17 (82%) Query: 56 TFDEEAYKNVNQEVVDF 72 TFDEEA+K ++ E +DF Sbjct: 221 TFDEEAFKEISIEAMDF 237 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.143 0.426 Lambda K H 0.267 0.0438 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,557,996 Number of Sequences: 36641 Number of extensions: 464260 Number of successful extensions: 1099 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1087 Number of HSP's gapped (non-prelim): 29 length of query: 242 length of database: 10,336,785 effective HSP length: 94 effective length of query: 148 effective length of database: 6,892,531 effective search space: 1020094588 effective search space used: 1020094588 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 58 (26.9 bits)