BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9BUI4 (534 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2XV4-S nrPDB 1110 0.0 6F41-O nrPDB 64 2e-10 4JDZ-A nrPDB 31 1.6 4JE0-A nrPDB 30 3.5 1O7D-D nrPDB 29 4.4 4H0O-A nrPDB 29 6.6 5JO7-A nrPDB 28 8.5 >2XV4-S nrPDB Length = 534 Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 534/534 (100%), Positives = 534/534 (100%) Query: 1 MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH 60 MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH Sbjct: 1 MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH 60 Query: 61 NLVSYQVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLTMSA 120 NLVSYQVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLTMSA Sbjct: 61 NLVSYQVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLTMSA 120 Query: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPGPPPPAPTL 180 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPGPPPPAPTL Sbjct: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPGPPPPAPTL 180 Query: 181 VINEKDMYLVPKLSLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPDDGIYWQANLD 240 VINEKDMYLVPKLSLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPDDGIYWQANLD Sbjct: 181 VINEKDMYLVPKLSLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPDDGIYWQANLD 240 Query: 241 RFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPVG 300 RFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPVG Sbjct: 241 RFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPVG 300 Query: 301 YNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGS 360 YNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGS Sbjct: 301 YNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGS 360 Query: 361 RCARIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRT 420 RCARIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRT Sbjct: 361 RCARIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRT 420 Query: 421 FYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGAE 480 FYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGAE Sbjct: 421 FYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGAE 480 Query: 481 EAQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFLLESYIECTMKRQ 534 EAQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFLLESYIECTMKRQ Sbjct: 481 EAQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFLLESYIECTMKRQ 534 >6F41-O nrPDB Length = 654 Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Query: 304 SKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGSRCA 363 S +++ +L +LA F+ ++ G+Y + K + L ++ E V+ G Sbjct: 449 SASLINSHLKILASSNFPFLN---ETKPGVYYVPYSKLMPVLKSSVYEYVIASTLGPSAM 505 Query: 364 RIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRTFYL 423 R+ R + K + +K + A++ K+ + L ++ N + +QE+P+T D + SR +L Sbjct: 506 RLSRCIRDNKLVSEKIINSTALMKEKDIRSTLASLIRYNSVEIQEVPRTADRSASRAVFL 565 Query: 424 YTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQR 466 + + + ++ANL+ +++ +EN LL+K+ R Sbjct: 566 FRCKETHSYNFMRQNLEWNMANLLFKKEKLKQENSTLLKKANR 608 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 64/316 (20%), Positives = 120/316 (37%), Gaps = 58/316 (18%) Query: 12 LLQEHFGEIVEKIGVHLIRTGSQPLR-VIAHDTGTSLDQVKKALCVLVQHNLVSY----- 65 L++ H GE + L+ G +R ++ G +D VK L L Q V Y Sbjct: 52 LVKAHLGERAASVIGMLVALGRLSVRELVEKIDGMDVDSVKTTLVSLTQLRCVKYLQETA 111 Query: 66 -QVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT------- 117 K Y + +L LYS LI++E++ ++ Sbjct: 112 ISGKKTTYYYYNEEGIHIL--------------LYSG---LIIDEIITQMRVNDEEEHKQ 154 Query: 118 -MSAVVKKVADRLTETMED------GKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSD 170 ++ +V+ V + T+ED +M Y +S+ FV+L + ++ + + T D Sbjct: 155 LVAEIVQNVISLGSLTVEDYLSSVTSDSMKYT-ISSLFVQLCEMGYLIQISKLHYTPIED 213 Query: 171 PGPPPPAPTLVINEKDMYLVPKLSLIGKGKRRRSSDEDAA-------GEPKAKRPKYTTD 223 + EK +P+ S + K+R + +A +P T D Sbjct: 214 LWQ-------FLYEKHYKNIPRNSPLSDLKKRSQAKMNAKTDFAKIINKPNELSQILTVD 266 Query: 224 NKEP--IPDDGIYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSS 281 K I + NLDRF + R + +++ R+ ++++ + LR++E S Sbjct: 267 PKTSLRIVKPTVSLTINLDRFMKGRRSKQLINLAKTRVGSVTAQVYKIALRLTE---QKS 323 Query: 282 APFTQPLSSNEIFRSL 297 PL+ + + L Sbjct: 324 PKIRDPLTQTGLLQDL 339 >4JDZ-A nrPDB Length = 438 Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust. Identities = 12/45 (26%), Positives = 24/45 (53%) Query: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPT 165 V ++ D++T D +D+ ++N++V + DT F + PT Sbjct: 246 VTEQFKDKITYGANDSVNVDFGSINNSYVVMVDTKFEYTTSASPT 290 >4JE0-A nrPDB Length = 316 Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPT 165 V ++ D++T D +D+ ++N++V + DT F PT Sbjct: 251 VTEQFKDKITYGANDSVNVDFGSINNSYVVMVDTKFEYTTSESPT 295 >1O7D-D nrPDB Length = 282 Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust. Identities = 12/38 (31%), Positives = 22/38 (57%) Query: 339 HKALASLATATLESVVQERFGSRCARIFRLVLQKKHIE 376 H A L A+L V + F + C+++ RL +++H+E Sbjct: 72 HWAQTHLVKASLVQEVHQNFSAWCSQVVRLYPRQRHLE 109 >4H0O-A nrPDB Length = 404 Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 23/49 (46%) Query: 7 KLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALC 55 K C L + ++ + IG ++ G L V G + QV+KA+C Sbjct: 300 KTCQLAFDVYIKQLAKTIGGLMVEIGGLDLLVFTDQMGLEVWQVRKAIC 348 >5JO7-A nrPDB Length = 538 Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 240 DRFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPV 299 DRFH D + A + +T E TML + TT T+ L+ +I L + Sbjct: 12 DRFHSFSVDNQVAEKYAQEI-ETLKEQTSTMLSAACGTT-----LTEKLNLIDIIERLGI 65 Query: 300 GYNISKQVLDQYLTLLADDP 319 Y+ KQ+ D + DP Sbjct: 66 AYHFEKQIEDMLDHIYRADP 85 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2XV4-S nrPDB 1032 0.0 6F41-O nrPDB 251 5e-67 Sequences not found previously or not previously below threshold: 4JDZ-A nrPDB 31 1.2 3M9X-A nrPDB 31 1.6 4JE0-A nrPDB 30 1.8 2AVT-A nrPDB 30 2.6 2C5U-A nrPDB 30 2.7 5GTE-A nrPDB 30 3.2 2POC-A nrPDB 30 3.2 1LTX-R nrPDB 30 3.7 4H0O-A nrPDB 29 4.8 5A01-A nrPDB 29 5.3 3F4S-A nrPDB 29 6.5 1Y63-A nrPDB 29 6.5 6N2Y-b2 nrPDB 29 7.4 6N2Z-b1 nrPDB 28 9.4 CONVERGED! >2XV4-S nrPDB Length = 534 Score = 1032 bits (2669), Expect = 0.0, Method: Composition-based stats. Identities = 534/534 (100%), Positives = 534/534 (100%) Query: 1 MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH 60 MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH Sbjct: 1 MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH 60 Query: 61 NLVSYQVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLTMSA 120 NLVSYQVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLTMSA Sbjct: 61 NLVSYQVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLTMSA 120 Query: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPGPPPPAPTL 180 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPGPPPPAPTL Sbjct: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPGPPPPAPTL 180 Query: 181 VINEKDMYLVPKLSLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPDDGIYWQANLD 240 VINEKDMYLVPKLSLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPDDGIYWQANLD Sbjct: 181 VINEKDMYLVPKLSLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPDDGIYWQANLD 240 Query: 241 RFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPVG 300 RFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPVG Sbjct: 241 RFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPVG 300 Query: 301 YNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGS 360 YNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGS Sbjct: 301 YNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGS 360 Query: 361 RCARIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRT 420 RCARIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRT Sbjct: 361 RCARIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRT 420 Query: 421 FYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGAE 480 FYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGAE Sbjct: 421 FYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGAE 480 Query: 481 EAQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFLLESYIECTMKRQ 534 EAQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFLLESYIECTMKRQ Sbjct: 481 EAQLQEIEEMITAPERQQLETLKRNVNKLDASEIQVDETIFLLESYIECTMKRQ 534 >6F41-O nrPDB Length = 654 Score = 251 bits (641), Expect = 5e-67, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 3/163 (1%) Query: 304 SKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGSRCA 363 S +++ +L +LA F+ ++ G+Y + K + L ++ E V+ G Sbjct: 449 SASLINSHLKILASSNFPFLN---ETKPGVYYVPYSKLMPVLKSSVYEYVIASTLGPSAM 505 Query: 364 RIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRTFYL 423 R+ R + K + +K + A++ K+ + L ++ N + +QE+P+T D + SR +L Sbjct: 506 RLSRCIRDNKLVSEKIINSTALMKEKDIRSTLASLIRYNSVEIQEVPRTADRSASRAVFL 565 Query: 424 YTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQR 466 + + + ++ANL+ +++ +EN LL+K+ R Sbjct: 566 FRCKETHSYNFMRQNLEWNMANLLFKKEKLKQENSTLLKKANR 608 Score = 35.5 bits (80), Expect = 0.067, Method: Composition-based stats. Identities = 64/314 (20%), Positives = 123/314 (39%), Gaps = 54/314 (17%) Query: 12 LLQEHFGEIVEKIGVHLIRTGSQPLR-VIAHDTGTSLDQVKKALCVLVQHNLVSYQVHKR 70 L++ H GE + L+ G +R ++ G +D VK L L Q V Y Sbjct: 52 LVKAHLGERAASVIGMLVALGRLSVRELVEKIDGMDVDSVKTTLVSLTQLRCVKY----- 106 Query: 71 GVVEYEAQCSRVLRMLRYPRYIYTTK----TLYSDTGELIVEELLLNGKLT--------M 118 ++ A + + Y Y + LYS LI++E++ ++ + Sbjct: 107 --LQETAISGK-----KTTYYYYNEEGIHILLYSG---LIIDEIITQMRVNDEEEHKQLV 156 Query: 119 SAVVKKVADRLTETMED------GKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPG 172 + +V+ V + T+ED +M Y +S+ FV+L + ++ + + T D Sbjct: 157 AEIVQNVISLGSLTVEDYLSSVTSDSMKYT-ISSLFVQLCEMGYLIQISKLHYTPIEDLW 215 Query: 173 PPPPAPTLVINEKDMYLVPKLSLIGKGKRRRSSDEDAA-------GEPKAKRPKYTTDNK 225 + EK +P+ S + K+R + +A +P T D K Sbjct: 216 Q-------FLYEKHYKNIPRNSPLSDLKKRSQAKMNAKTDFAKIINKPNELSQILTVDPK 268 Query: 226 EP--IPDDGIYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAP 283 I + NLDRF + R + +++ R+ ++++ + LR++E S Sbjct: 269 TSLRIVKPTVSLTINLDRFMKGRRSKQLINLAKTRVGSVTAQVYKIALRLTE---QKSPK 325 Query: 284 FTQPLSSNEIFRSL 297 PL+ + + L Sbjct: 326 IRDPLTQTGLLQDL 339 >4JDZ-A nrPDB Length = 438 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%) Query: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPT 165 V ++ D++T D +D+ ++N++V + DT F + PT Sbjct: 246 VTEQFKDKITYGANDSVNVDFGSINNSYVVMVDTKFEYTTSASPT 290 >3M9X-A nrPDB Length = 313 Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%) Query: 449 RRQFETKENKRLLEKSQRVEAIIASMQATGAEEAQLQEIEEMI 491 R + K+ ++K++ + A + A G EE Q+ +IE MI Sbjct: 13 RLERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMI 55 >4JE0-A nrPDB Length = 316 Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 121 VVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPT 165 V ++ D++T D +D+ ++N++V + DT F PT Sbjct: 251 VTEQFKDKITYGANDSVNVDFGSINNSYVVMVDTKFEYTTSESPT 295 >2AVT-A nrPDB Length = 378 Score = 30.1 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 28/227 (12%) Query: 293 IFRSLPVGYNISKQVLDQYLTLLAD--DPLEFVGKSGDSGGGMYVINLHKALASLATATL 350 I SLP +I+ + ++Q+ +L + GK D + ++ L L T L Sbjct: 85 IISSLP-DISINVKEIEQHQVVLTSGKSEITLKGKDVDQYPRLQEVSTENPL-ILKTKLL 142 Query: 351 ESVVQERFGSRCARIFRLVLQKKHIEQKQVEDFAMIPAKEAKDMLYKML-----SENFM- 404 +S++ E + + R +L HI +DF + A ++ M +++ S +FM Sbjct: 143 KSIIAETAFAASLQESRPILTGVHIVLSNHKDFKAV-ATDSHRMSQRLITLDNTSADFMV 201 Query: 405 -----SLQEIPK--TPDHAPSRTFY-----LYTVNILSAARMLLHRCYKSIANLIERRQF 452 SL+E T D F+ L+ +S LL Y L+ +F Sbjct: 202 VLPSKSLREFSAVFTDDIETVEVFFSPSQILFRSEHISFYTRLLEGNYPDTDRLLM-TEF 260 Query: 453 ETKE--NKRLLEKSQRVEAIIASMQATGAEEAQLQE--IEEMITAPE 495 ET+ N + L + +I++ G + ++ + I + +PE Sbjct: 261 ETEVVFNTQSLRHAMERAFLISNATQNGTVKLEITQNHISAHVNSPE 307 >2C5U-A nrPDB Length = 375 Score = 30.1 bits (66), Expect = 2.7, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 29/57 (50%) Query: 91 YIYTTKTLYSDTGELIVEELLLNGKLTMSAVVKKVADRLTETMEDGKTMDYAEVSNT 147 Y+ + L+ G + E+ L+ + M+ ++ DRL E EDG T ++ V+ T Sbjct: 109 YLDGDEILFKSKGSIKSEQALMANGILMNINHHRLRDRLKELAEDGFTANFEFVAPT 165 >5GTE-A nrPDB Length = 175 Score = 29.7 bits (65), Expect = 3.2, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 18/103 (17%) Query: 335 VINLHKALASLATATLESVVQERFGSRCARIFRLVLQKKHIEQKQVEDF---AMIPAKEA 391 INLHK + SL + E V E A + V K I E+F + A + Sbjct: 44 FINLHKVMPSL--SVCELVEGE------ANVVGCVRYVKGIMHPIEEEFWAKEKLVALDN 95 Query: 392 KDMLYKML-------SENFMSLQEIPKTPDHAPSRTFYLYTVN 427 K+M Y + E++ + +I + P+H SR + + Sbjct: 96 KNMSYSYIFTECFTGYEDYTATMQIVEGPEHKGSRFDWSFQCK 138 >2POC-A nrPDB Length = 367 Score = 29.7 bits (65), Expect = 3.2, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 8/84 (9%) Query: 288 LSSNEIFRSL---PVGYNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALAS 344 L++ IF L PV ++ LD+ + DD FV +SG++ + + Sbjct: 66 LATRSIFEELTEIPVSVELASDFLDRRSPVFRDDTCVFVSQSGETADSILALQY-----C 120 Query: 345 LATATLESVVQERFGSRCARIFRL 368 L L + GS +R Sbjct: 121 LERGALTVGIVNSVGSSMSRQTHC 144 >1LTX-R nrPDB Length = 650 Score = 29.7 bits (65), Expect = 3.7, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Query: 149 VRLADTHFVQRCPSVPTTENSDPGPPPPAPTLVINEKDMYLVPKLSLIGKGKRRRSSDED 208 V+ A+T F Q CP+ E+ P PP P ++ + VP+ S+ + + Sbjct: 585 VKQAETLFQQICPN----EDFCPAPPNPEDIVLDGDSSQQEVPESSVTPETNSETPKEST 640 Query: 209 AAGEPK 214 G P+ Sbjct: 641 VLGNPE 646 >4H0O-A nrPDB Length = 404 Score = 29.3 bits (64), Expect = 4.8, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%) Query: 7 KLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALC 55 K C L + ++ + IG ++ G L V G + QV+KA+C Sbjct: 300 KTCQLAFDVYIKQLAKTIGGLMVEIGGLDLLVFTDQMGLEVWQVRKAIC 348 >5A01-A nrPDB Length = 710 Score = 28.9 bits (63), Expect = 5.3, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 21/126 (16%) Query: 229 PDDGIYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTMLRMSEITTSSSAPFTQPL 288 PDDG ++ + R ++F D + + D+ ++ + ++ M+ T Sbjct: 274 PDDGTTFRHKISRESENFVDLSQIPCNGKAADKIFNDGIHILVNMNGYTKG--------- 324 Query: 289 SSNEIF--RSLPV-----GY--NISKQVLDQYLTLLADDPLEFVGKSGDS---GGGMYVI 336 + NEIF R P+ GY +D +T PLE + + Y I Sbjct: 325 ARNEIFALRPAPIQVMWLGYPGTSGASFMDYIITDSVTSPLELAYQYSEKLSYMPHTYFI 384 Query: 337 NLHKAL 342 HK + Sbjct: 385 GDHKQM 390 >3F4S-A nrPDB Length = 226 Score = 28.9 bits (63), Expect = 6.5, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 8/93 (8%) Query: 293 IFRSLPVGYNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLES 352 IFR P+ Y K + + +D F +S NL A L + Sbjct: 78 IFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDSWNYYNLSDLTLLQRIAALSN 137 Query: 353 VVQERFGSRCARIFRLVLQKKHIEQKQVEDFAM 385 + Q+ F + + KK I K V D ++ Sbjct: 138 LKQDAFN-------QCINDKK-IMDKIVNDKSL 162 >1Y63-A nrPDB Length = 184 Score = 28.9 bits (63), Expect = 6.5, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 17/165 (10%) Query: 346 ATATLESVVQERFGSRCARIFRLVLQKKHIEQKQVE-DFAMIPAKEAKDMLYKMLSENFM 404 T+ E + E G + + +LV + + E D +I K+ +L +FM Sbjct: 23 KTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDRLL------DFM 76 Query: 405 SLQEIPKTPDHAPSRTFYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKS 464 + + + L+ ++LH + + + +RQ+ ++ Sbjct: 77 EPIMVSRGNHVVDYHSSELFPERWFHMV-VVLHTSTEVLFERLTKRQY---------SEA 126 Query: 465 QRVEAIIASMQATGAEEAQLQEIEEMITAPERQQLETLKRNVNKL 509 +R E + A +Q EEA+ ++++ E LE + V ++ Sbjct: 127 KRAENMEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAATVEEI 171 >6N2Y-b2 nrPDB Length = 168 Score = 28.5 bits (62), Expect = 7.4, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 433 RMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGA--EEAQ--LQEIE 488 ++ R + IAN I++ + +E ++LLE+ + E + S Q A E A+ +E + Sbjct: 35 NIMKQR-EEHIANEIDQAEKRRQEAEKLLEEQR--ELMKQSRQEAQALIENARKLAEEQK 91 Query: 489 EMITAPERQQLETLKRNVNK 508 E I A R + E +K K Sbjct: 92 EQIVASARAEAERVKETAKK 111 >6N2Z-b1 nrPDB Length = 168 Score = 28.1 bits (61), Expect = 9.4, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 7/80 (8%) Query: 433 RMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGA--EEAQ--LQEIE 488 ++ R + IAN I++ + +E ++LLE+ + E + S Q A E A+ +E + Sbjct: 35 NIMKQR-EEHIANEIDQAEKRRQEAEKLLEEQR--ELMKQSRQEAQALIENARKLAEEQK 91 Query: 489 EMITAPERQQLETLKRNVNK 508 E I A R + E +K K Sbjct: 92 EQIVASARAEAERVKETAKK 111 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.131 0.352 Lambda K H 0.267 0.0405 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,098,562 Number of Sequences: 36641 Number of extensions: 753019 Number of successful extensions: 2263 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 2242 Number of HSP's gapped (non-prelim): 43 length of query: 534 length of database: 10,336,785 effective HSP length: 102 effective length of query: 432 effective length of database: 6,599,403 effective search space: 2850942096 effective search space used: 2850942096 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)