BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9BTP7 (215 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4M6W-B nrPDB 405 e-114 2M9M-A nrPDB 292 7e-80 2LYH-A nrPDB 152 1e-37 2M9N-A nrPDB 120 3e-28 2BHN-A nrPDB 42 3e-04 2OWO-A nrPDB 34 0.051 4GLX-A nrPDB 34 0.052 1KFT-A nrPDB 30 1.0 4BXO-A nrPDB 28 3.7 4ZA5-A nrPDB 27 5.2 5FYJ-G nrPDB 27 5.3 4M6W-A nrPDB 27 6.2 >4M6W-B nrPDB Length = 208 Score = 405 bits (1040), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/200 (99%), Positives = 200/200 (100%) Query: 16 LGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLVAGNGYRKR 75 +GHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLVAGNGYRKR Sbjct: 1 MGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLVAGNGYRKR 60 Query: 76 LVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQE 135 LVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQE Sbjct: 61 LVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQE 120 Query: 136 QTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGEL 195 QTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGEL Sbjct: 121 QTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGEL 180 Query: 196 EQVVGQAVAQQIHAFFTQPR 215 EQVVGQAVAQQIHAFFTQPR Sbjct: 181 EQVVGQAVAQQIHAFFTQPR 200 >2M9M-A nrPDB Length = 147 Score = 292 bits (748), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILY 60 MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILY Sbjct: 1 MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILY 60 Query: 61 VTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVA 120 VTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVA Sbjct: 61 VTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVA 120 Query: 121 SQMEASCLVIQLVQEQTKE 139 SQMEASCLVIQLVQEQTKE Sbjct: 121 SQMEASCLVIQLVQEQTKE 139 >2LYH-A nrPDB Length = 98 Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/84 (94%), Positives = 80/84 (95%) Query: 132 LVQEQTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNAS 191 LV + EPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNAS Sbjct: 15 LVPRGSLEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNAS 74 Query: 192 IGELEQVVGQAVAQQIHAFFTQPR 215 IGELEQVVGQAVAQQIHAFFTQPR Sbjct: 75 IGELEQVVGQAVAQQIHAFFTQPR 98 >2M9N-A nrPDB Length = 63 Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 61/61 (100%), Positives = 61/61 (100%) Query: 155 SEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQP 214 SEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQP Sbjct: 3 SEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQP 62 Query: 215 R 215 R Sbjct: 63 R 63 >2BHN-A nrPDB Length = 214 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%) Query: 110 LDLGMVLLPVASQMEASCLVIQLVQEQTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGV 169 LD G+ L+ + ++ L + T+E + ++ KK L L +Q PG+ Sbjct: 104 LDYGIRLMNTMDPKGTALVIESLARLSTREGGQRIVIHKKPRLSDVREWQLYILQSFPGI 163 Query: 170 GKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQQIHAFFTQP 214 G+ A +L++F S+++ AS E+ +V +G+ A++I P Sbjct: 164 GRRTAERILERFGSLERFFTASKAEISKVEGIGEKRAEEIKKILMTP 210 >2OWO-A nrPDB Length = 671 Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 169 VGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQQIHAFFTQ 213 VG+ A L F +++ L ASI EL++V VG VA +H FF + Sbjct: 520 VGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 >4GLX-A nrPDB Length = 586 Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 169 VGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQQIHAFFTQ 213 VG+ A L F +++ L ASI EL++V VG VA +H FF + Sbjct: 520 VGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 >1KFT-A nrPDB Length = 78 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 162 TVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVG--QAVAQQI 207 +++ I GVG + +LL+ +Q L NAS+ E+ +V G Q +A++I Sbjct: 25 SLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKI 72 >4BXO-A nrPDB Length = 254 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 85/180 (47%), Gaps = 20/180 (11%) Query: 49 DFYLSNRCCILYVTEADLVAGNGYRKRLVRVRNSNNL--KGIVVVEKTRM----SEQYFP 102 D+ +SNR + ++++++ K + ++++ ++ + V+VEK R + + F Sbjct: 60 DYIVSNRMVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFR 119 Query: 103 ALQKF-----TVLDLGMVLLPVASQMEASCLVIQLVQEQTKEPSKNPLLGKKRALLLSEP 157 + + T++ G+ +L + Q E + L+ +L E KN + + ++ Sbjct: 120 RTKSYDSLLTTLIGAGIRILFSSCQEETADLLKEL---SLVEQRKNVGIHVPTVVNSNKS 176 Query: 158 SLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELE---QVVGQA---VAQQIHAFF 211 L+ IP + + A + +F S+++++N+S+ E+ QV Q + + IH F Sbjct: 177 EALQFYLSIPNISYITALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVF 236 >4ZA5-A nrPDB Length = 508 Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 111 DLGMVLLPVASQMEASCLVIQLVQEQTKEPSKNPLLGKKRAL--LLSEPSLLR 161 DL + P+ +EA+ + ++ + K P N L+G K L +L P LR Sbjct: 22 DLVEINTPIDPNLEAAAITRRVCETNDKAPLFNNLIGMKNGLFRILGAPGSLR 74 >5FYJ-G nrPDB Length = 484 Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust. Identities = 14/58 (24%), Positives = 26/58 (44%) Query: 6 PDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTE 63 P D P +PL ++ N + + ++M I ++++ L P L+ C L T Sbjct: 48 PTDPNPQEIPLKNVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLICTN 105 >4M6W-A nrPDB Length = 221 Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 85/180 (47%), Gaps = 20/180 (11%) Query: 49 DFYLSNRCCILYVTEADLVAGNGYRKRLVRVRNSNNL--KGIVVVEKTRM----SEQYFP 102 D+ +SNR + ++++++ K + ++++ ++ + V+VEK R + + F Sbjct: 44 DYIVSNRMVVERRSQSEMLNSVNKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFR 103 Query: 103 ALQKF-----TVLDLGMVLLPVASQMEASCLVIQLVQEQTKEPSKNPLLGKKRALLLSEP 157 + + T++ G+ +L + Q E + L+ +L E KN + + ++ Sbjct: 104 RTKSYDSLLTTLIGAGIRILFSSCQEETADLLKEL---SLVEQRKNVGIHVPTVVNSNKS 160 Query: 158 SLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELE---QVVGQA---VAQQIHAFF 211 L+ IP + + A + +F S+++++N+S+ E+ QV Q + + IH F Sbjct: 161 EALQFYLSIPNISYITALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVF 220 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4M6W-B nrPDB 363 e-101 2M9M-A nrPDB 284 2e-77 2BHN-A nrPDB 153 5e-38 2LYH-A nrPDB 128 2e-30 2M9N-A nrPDB 99 1e-21 Sequences not found previously or not previously below threshold: 1X2I-A nrPDB 52 2e-07 4GLX-A nrPDB 34 0.047 2OWO-A nrPDB 34 0.047 1KFT-A nrPDB 33 0.064 2GUH-A nrPDB 32 0.27 5FYJ-G nrPDB 29 1.3 3B0X-A nrPDB 29 1.3 5Y52-A nrPDB 29 1.4 2CSB-A nrPDB 29 1.6 4ITQ-A nrPDB 29 1.7 1DGS-A nrPDB 29 1.7 4GFJ-A nrPDB 29 1.8 5HM5-A nrPDB 29 2.0 6N8J-m nrPDB 27 7.1 1Z00-A nrPDB 27 7.5 2A1J-B nrPDB 27 7.6 4WA8-A nrPDB 27 8.5 >4M6W-B nrPDB Length = 208 Score = 363 bits (933), Expect = e-101, Method: Composition-based stats. Identities = 199/200 (99%), Positives = 200/200 (100%) Query: 16 LGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLVAGNGYRKR 75 +GHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLVAGNGYRKR Sbjct: 1 MGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLVAGNGYRKR 60 Query: 76 LVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQE 135 LVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQE Sbjct: 61 LVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQE 120 Query: 136 QTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGEL 195 QTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGEL Sbjct: 121 QTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGEL 180 Query: 196 EQVVGQAVAQQIHAFFTQPR 215 EQVVGQAVAQQIHAFFTQPR Sbjct: 181 EQVVGQAVAQQIHAFFTQPR 200 >2M9M-A nrPDB Length = 147 Score = 284 bits (727), Expect = 2e-77, Method: Composition-based stats. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILY 60 MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILY Sbjct: 1 MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILY 60 Query: 61 VTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVA 120 VTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVA Sbjct: 61 VTEADLVAGNGYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVA 120 Query: 121 SQMEASCLVIQLVQEQTKE 139 SQMEASCLVIQLVQEQTKE Sbjct: 121 SQMEASCLVIQLVQEQTKE 139 >2BHN-A nrPDB Length = 214 Score = 153 bits (387), Expect = 5e-38, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 2/132 (1%) Query: 85 LKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQEQTKEPSKNP 144 ++G V + R E+ A LD G+ L+ + ++ L + T+E + Sbjct: 79 VEGPPVPRRYRGRERSLYAAMAALQLDYGIRLMNTMDPKGTALVIESLARLSTREGGQRI 138 Query: 145 LLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQA 202 ++ KK L L +Q PG+G+ A +L++F S+++ AS E+ +V +G+ Sbjct: 139 VIHKKPRLSDVREWQLYILQSFPGIGRRTAERILERFGSLERFFTASKAEISKVEGIGEK 198 Query: 203 VAQQIHAFFTQP 214 A++I P Sbjct: 199 RAEEIKKILMTP 210 >2LYH-A nrPDB Length = 98 Score = 128 bits (321), Expect = 2e-30, Method: Composition-based stats. Identities = 79/84 (94%), Positives = 80/84 (95%) Query: 132 LVQEQTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNAS 191 LV + EPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNAS Sbjct: 15 LVPRGSLEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNAS 74 Query: 192 IGELEQVVGQAVAQQIHAFFTQPR 215 IGELEQVVGQAVAQQIHAFFTQPR Sbjct: 75 IGELEQVVGQAVAQQIHAFFTQPR 98 >2M9N-A nrPDB Length = 63 Score = 99.3 bits (246), Expect = 1e-21, Method: Composition-based stats. Identities = 61/61 (100%), Positives = 61/61 (100%) Query: 155 SEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQP 214 SEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQP Sbjct: 3 SEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQP 62 Query: 215 R 215 R Sbjct: 63 R 63 >1X2I-A nrPDB Length = 75 Score = 52.3 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 3/69 (4%) Query: 148 KKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQ 205 +K+AL L+E L V+ +P V A LL+ F S++++ AS+ EL +V +G+ +A+ Sbjct: 2 EKKALTLAERQRL-IVEGLPHVSATLARRLLKHFGSVERVFTASVAELMKVEGIGEKIAK 60 Query: 206 QIHAFFTQP 214 +I T P Sbjct: 61 EIRRVITAP 69 >4GLX-A nrPDB Length = 586 Score = 34.2 bits (77), Expect = 0.047, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 169 VGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQQIHAFFTQ 213 VG+ A L F +++ L ASI EL++V VG VA +H FF + Sbjct: 520 VGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 >2OWO-A nrPDB Length = 671 Score = 34.2 bits (77), Expect = 0.047, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 169 VGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQQIHAFFTQ 213 VG+ A L F +++ L ASI EL++V VG VA +H FF + Sbjct: 520 VGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE 566 >1KFT-A nrPDB Length = 78 Score = 33.5 bits (75), Expect = 0.064, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 2/48 (4%) Query: 162 TVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVG--QAVAQQI 207 +++ I GVG + +LL+ +Q L NAS+ E+ +V G Q +A++I Sbjct: 25 SLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKI 72 >2GUH-A nrPDB Length = 214 Score = 31.5 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 29/56 (51%) Query: 135 EQTKEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNA 190 ++T E S++ ++ + P T++ I V APL+++ F S +QL +A Sbjct: 34 KRTAEQSRSLIVDAAGRAFATRPYREITLKDIAEDAGVSAPLIIKYFGSKEQLFDA 89 >5FYJ-G nrPDB Length = 484 Score = 29.2 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%) Query: 6 PDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVT 62 P D P +PL ++ N + + ++M I ++++ L P L+ C L T Sbjct: 48 PTDPNPQEIPLKNVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLICT 104 >3B0X-A nrPDB Length = 575 Score = 29.2 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 146 LGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFP--SIQQLSNA-SIGELEQV--VG 200 + K L P + V ++PGVG A LL + S+++L A G+L ++ G Sbjct: 78 VRKHEELSRKVPRGVLEVMEVPGVGPKTARLLYEGLGIDSLEKLKAALDRGDLTRLKGFG 137 Query: 201 QAVAQQIH 208 A++I Sbjct: 138 PKRAERIR 145 >5Y52-A nrPDB Length = 331 Score = 29.2 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 20/40 (50%) Query: 176 LLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQPR 215 +L++FP +Q++ S + + + + +T+PR Sbjct: 258 RILERFPQLQEVYFESQNHTWDKIVEEIGESEGKVYTEPR 297 >2CSB-A nrPDB Length = 519 Score = 28.8 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 157 PSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSN-ASIGELEQV-----VGQAVAQQI 207 L + + GVG+ A LL+ F + +++ A E+E++ VG+ V + + Sbjct: 407 EIQLAELTKKEGVGRKTAERLLRAFGNPERVKQLAREFEIEKLASVEGVGERVLRSL 463 >4ITQ-A nrPDB Length = 107 Score = 28.8 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 13/68 (19%) Query: 138 KEPSKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFP-----SIQQLSNASI 192 K+ +N ++GK + L ++ +PGVGKV+A ++++ ++ L + I Sbjct: 44 KQGQENDVIGKMKVSAL--------LESLPGVGKVRAKQIMERLGISESRRVRGLGSNQI 95 Query: 193 GELEQVVG 200 LE+ G Sbjct: 96 ASLEREFG 103 >1DGS-A nrPDB Length = 667 Score = 28.8 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 157 PSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNAS 191 LL + +PGVG+V A L ++F ++ +L AS Sbjct: 504 ERLLYAL-GLPGVGEVLARNLARRFGTMDRLLEAS 537 >4GFJ-A nrPDB Length = 685 Score = 28.8 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 157 PSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSN-ASIGELEQV-----VGQAVAQQI 207 L + + GVG+ A LL+ F + +++ A E+E++ VG+ V + + Sbjct: 407 EIQLAELTKKEGVGRKTAERLLRAFGNPERVKQLAREFEIEKLASVEGVGERVLRSL 463 >5HM5-A nrPDB Length = 854 Score = 28.8 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 157 PSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSN-ASIGELEQV-----VGQAVAQQI 207 L + + GVG+ A LL+ F + +++ A E+E++ VG+ V + + Sbjct: 407 EIQLAELTKKEGVGRKTAERLLRAFGNPERVKQLAREFEIEKLASVEGVGERVLRSL 463 >6N8J-m nrPDB Length = 486 Score = 26.9 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%) Query: 85 LKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQEQTK 138 +G+V VE EQY P + K + ++ +A+ + L ++Q + Sbjct: 384 FRGVVRVEHVTHPEQYIPGVLKRCQVKHLERTYEISGWKDATEFIEILARKQGR 437 >1Z00-A nrPDB Length = 89 Score = 26.9 bits (58), Expect = 7.5, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 163 VQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQQIHAFFTQP 214 + + V K + LL F S++QL AS +L +G A+++ +P Sbjct: 21 LTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEP 74 >2A1J-B nrPDB Length = 91 Score = 26.9 bits (58), Expect = 7.6, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 163 VQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQV--VGQAVAQQIHAFFTQP 214 + + V K + LL F S++QL AS +L +G A+++ +P Sbjct: 34 LTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEP 87 >4WA8-A nrPDB Length = 355 Score = 26.5 bits (57), Expect = 8.5, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 25/49 (51%) Query: 166 IPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAFFTQP 214 +PG+G +A L++K+ S+ +L + I + +++ F +P Sbjct: 247 VPGIGPKRALQLIRKYGSLDELKDTDIWPKIERHLPVEPEKLRRLFLEP 295 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.138 0.386 Lambda K H 0.267 0.0422 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,090,443 Number of Sequences: 36641 Number of extensions: 304696 Number of successful extensions: 769 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 737 Number of HSP's gapped (non-prelim): 43 length of query: 215 length of database: 10,336,785 effective HSP length: 93 effective length of query: 122 effective length of database: 6,929,172 effective search space: 845358984 effective search space used: 845358984 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 57 (26.5 bits)