BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q9AET5 (506 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5E9U-A nrPDB 1032 0.0 4PQG-A nrPDB 692 0.0 4WAD-A nrPDB 98 7e-21 6D9T-A nrPDB 49 5e-06 5D01-A nrPDB 47 1e-05 2JJM-A nrPDB 46 3e-05 4XYW-A nrPDB 45 1e-04 5N7Z-A nrPDB 45 1e-04 3C4V-A nrPDB 42 4e-04 4RBN-A nrPDB 39 0.004 2X6Q-A nrPDB 39 0.007 2IW1-A nrPDB 38 0.012 3OKC-A nrPDB 35 0.073 2R60-A nrPDB 34 0.16 5XGU-B nrPDB 33 0.43 6ICZ-I nrPDB 30 1.7 1O7D-A nrPDB 30 2.3 2CGE-A nrPDB 30 2.5 2CG9-A nrPDB 30 2.5 5E9U-B nrPDB 29 4.5 2A1X-A nrPDB 28 7.9 5BXY-A nrPDB 28 8.6 >5E9U-A nrPDB Length = 503 Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/502 (99%), Positives = 501/502 (99%) Query: 2 TVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDEE 61 TVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDEE Sbjct: 2 TVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDEE 61 Query: 62 IIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQED 121 IIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQED Sbjct: 62 IIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQED 121 Query: 122 QDSVEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIED 181 QD VEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIED Sbjct: 122 QDFVEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIED 181 Query: 182 GQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVVV 241 GQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVVV Sbjct: 182 GQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVVV 241 Query: 242 HAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQIA 301 HAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQIA Sbjct: 242 HAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQIA 301 Query: 302 TIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGS 361 TIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGS Sbjct: 302 TIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGS 361 Query: 362 EEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLI 421 EEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLI Sbjct: 362 EEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLI 421 Query: 422 GFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVA 481 GFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVA Sbjct: 422 GFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVA 481 Query: 482 ENYLTSRVEAAWTQLLKEVRDD 503 ENYLTSRVEAAWTQLLKEVRDD Sbjct: 482 ENYLTSRVEAAWTQLLKEVRDD 503 >4PQG-A nrPDB Length = 511 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/503 (64%), Positives = 397/503 (78%) Query: 1 MTVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDE 60 MT+YNINLGIGWASSGVEYAQAYRA + R++ +KFIF DMILADNIQHLT NIGF D Sbjct: 9 MTIYNINLGIGWASSGVEYAQAYRAGVFRKLNLSSKFIFTDMILADNIQHLTANIGFDDN 68 Query: 61 EIIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQE 120 ++IWLYN+FTDIKIAPT+VT+D VLA G+ EK GK++R F+ D+F+TCYL E Sbjct: 69 QVIWLYNHFTDIKIAPTSVTVDDVLAYFGGEESHREKNGKVLRVFFFDQDKFVTCYLVDE 128 Query: 121 DQDSVEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIE 180 ++D V+H EYV +G LIRKDYFSY RY SEYFAP ++ A LYQR FY+EDG+ YD+L+ Sbjct: 129 NKDLVQHAEYVFKGNLIRKDYFSYTRYCSEYFAPKDNVAVLYQRTFYNEDGTPVYDILMN 188 Query: 181 DGQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVV 240 G+E++Y F D+IFY K VR F++ L L D+VILDRETGIGQVVFEE+Q A L VV Sbjct: 189 QGKEEVYHFKDKIFYGKQAFVRAFMKSLNLNKSDLVILDRETGIGQVVFEEAQTAHLAVV 248 Query: 241 VHAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQI 300 VHAEH+SENA+++DYILWNN+YDYQFTNADKVDFFIV+T+ Q +L++QF Y+ QP+I Sbjct: 249 VHAEHYSENATNEDYILWNNYYDYQFTNADKVDFFIVSTDRQNEVLQEQFAKYTQHQPKI 308 Query: 301 ATIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKG 360 TIPVGS+D LT + RKP+S+ITASRLA EKHIDWLV A ++AH +LPELT DIYG G Sbjct: 309 VTIPVGSIDSLTDSSQGRKPFSLITASRLAKEKHIDWLVKAVIEAHKELPELTFDIYGSG 368 Query: 361 SEEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPL 420 E+ LR I A+DYI+LKGHA+LSQIY+ YE+YLTASTSEGFGLTLMEA+GSGLPL Sbjct: 369 GEDSLLREIIANHQAEDYIQLKGHAELSQIYSQYEVYLTASTSEGFGLTLMEAIGSGLPL 428 Query: 421 IGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQV 480 IGFDV YGNQTFI+DG+NGYL+P SS+HVEDQI A+ KI L+ + R + M +SYQ+ Sbjct: 429 IGFDVPYGNQTFIEDGQNGYLIPSSSDHVEDQIKQAYAAKICQLYQENRLEAMRAYSYQI 488 Query: 481 AENYLTSRVEAAWTQLLKEVRDD 503 AE +LT + W + ++EV D Sbjct: 489 AEGFLTKEILEKWKKTVEEVLHD 511 >4WAD-A nrPDB Length = 498 Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 106/411 (25%), Positives = 183/411 (44%), Gaps = 31/411 (7%) Query: 96 EKEGKIVRYFYPQDDQFITCYLRQEDQDSVEHVEYVSRGRLIRKDYFSYVRYASEYFAPH 155 E+ I RYF +I Y+R+ + V +++ + I + FS++ Sbjct: 108 EESKGISRYFDITTGTYI-AYIRKSKSEKV--IDFFKDNKRIER--FSFIDNKVHMKETF 162 Query: 156 N-DAATLYQRRFYHEDGS--VAYDMLIEDGQ-EKLYRFPDRI-FYSKAELVRYFLQCLQL 210 N D YQ FY E G ++ ++ +G K Y ++ F + L Y+L+ L Sbjct: 163 NVDNKVCYQV-FYDEKGYPYISRNINANNGAVGKTYVLVNKKEFKNNLALCVYYLEKLIK 221 Query: 211 QADDVVILDRETGIGQVVFEESQKA--KLGVVVHAEHFSENASSDDYILWNNFYDYQFTN 268 + D +++ G +F + K K GV+ H + + + DD + Y N Sbjct: 222 DSKDSIMICDGPGSFPKMFNTNHKNAQKYGVI----HVNHHENFDDTGAFKKSEKYIIEN 277 Query: 269 ADKVDFFIVATEAQKRILEQQFQHYSDKQPQIATIPVGSLDQLTYPKEPRKPYSMITASR 328 A+K++ IV TEAQ+ + QF I TI + PK + + SR Sbjct: 278 ANKINGVIVLTEAQRLDILNQFD-----VENIFTIS-NFVKIHNAPKHFQTEKIVGHISR 331 Query: 329 LATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHADLS 388 + K ID L+ + + IYG+GS +DK+ + IE+ + + LKG+ Sbjct: 332 MVPTKRIDLLIEVAELVVKKDNAVKFHIYGEGSVKDKIAKMIEDKNLERNVFLKGYTTTP 391 Query: 389 Q-IYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSS- 446 Q ++L ++ S EG GL+++EA+ S P++ FD++YG FI+D KNGYL+ + Sbjct: 392 QKCLEDFKLVVSTSQYEGQGLSMIEAMISKRPVVAFDIKYGPSDFIEDNKNGYLIENHNI 451 Query: 447 NHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSRVEAAWTQLL 497 N + D+I+ ++A + +E + E Y T + W L Sbjct: 452 NDMADKILQLVNNDVLAAEFGSKARE------NIIEKYSTESILEKWLNLF 496 >6D9T-A nrPDB Length = 400 Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 6/179 (3%) Query: 323 MITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLK 382 +I S K ID ++ + ++P L + G G E +R+ +E ++ + Sbjct: 219 LIHVSNFRQVKRIDTIIETFAKVREKIPS-KLILLGDGPELVPMRQLTKELNVEEDVLFL 277 Query: 383 GHAD-LSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYL 441 G D +S+ Y +L L S E FGLTL+EA+ +G+ IG + G + I G+ G++ Sbjct: 278 GKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVVPIGSNAG-GIKEVIKHGETGFV 336 Query: 442 LPVS-SNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSRVEAAWTQLLKE 499 + V + D I +K+ L+++ ++ ++ + + +T + E + ++L E Sbjct: 337 VDVGDCDSASDYAIRLLEDKV--LYNKLQKNMLADIAERFGSELITDQYEYYYQKMLNE 393 >5D01-A nrPDB Length = 379 Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 8/136 (5%) Query: 354 LDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHAD-LSQIYAGYELYLTASTSEGFGLTLME 412 L + G G E+ I + G +D + + G+ D + +Y+ +L L S E FGL L+E Sbjct: 234 LLLVGDGPEKSTACELIRKYGLEDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLE 293 Query: 413 AVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQE 472 A+ G+P IG ++ G I + +G+L+ V + AA + L + Sbjct: 294 AMACGVPCIGTNIG-GIPEVIKNNVSGFLVDVG------DVTAATARAMSILEDEQLSNR 346 Query: 473 MSQHSYQVAENYLTSR 488 ++ + ++ EN +S+ Sbjct: 347 FTKAAIEMLENEFSSK 362 >2JJM-A nrPDB Length = 394 Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 6/121 (4%) Query: 339 VAATVQAHAQLP---ELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHAD-LSQIYAGY 394 V VQA A++ + L + G G E + + ++ +D + G D ++++ A Sbjct: 226 VQDVVQAFAKIVTEVDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMS 285 Query: 395 ELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVS-SNHVEDQI 453 +L L S E FGL L+EA+ G+P IG V G I G GYL V + V DQ Sbjct: 286 DLMLLLSEKESFGLVLLEAMACGVPCIGTRVG-GIPEVIQHGDTGYLCEVGDTTGVADQA 344 Query: 454 I 454 I Sbjct: 345 I 345 >4XYW-A nrPDB Length = 338 Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 16/201 (7%) Query: 287 EQQFQHYSDKQPQIATIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAH 346 ++ ++ K+P+I T+ S+ Q+ + Y ++ RL K + L Sbjct: 147 KKAIENIGIKEPKIITVS-NSVPQMPRCNNKQLQYKVLFVGRLTHPKRPELLANVI---- 201 Query: 347 AQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGF 406 ++ P+ +L I G G + L+++ E + I G + Y Y+L+ S SEG Sbjct: 202 SKKPQYSLHIVGGGERLESLKKQFSEC---ENIHFLGEVNNFYNYHEYDLFSLISDSEGL 258 Query: 407 GLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFS 466 ++ +EA + +PL+ DV G + +G NG L+ + ED I ++KI + Sbjct: 259 PMSGLEAHTAAIPLLLSDV--GGCFELIEG-NGLLV----ENTEDD-IGYKLDKIFDDYE 310 Query: 467 QGRQQEMSQHSYQVAENYLTS 487 R+Q + V ENY ++ Sbjct: 311 NYREQAIRASGKFVIENYASA 331 >5N7Z-A nrPDB Length = 359 Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 10/145 (6%) Query: 304 PVGSLDQLTYPKEPRKPYSMITASRLATE--KHIDWLVAATVQAHAQLPELTLDIYGKGS 361 PV + P E KP + RL E K + L + E L I G GS Sbjct: 164 PVSIKTVIVPPPERDKPAVFLYVGRLKFEGQKRVKDLFDGLARTTG---EWQLHIIGDGS 220 Query: 362 EEDKLRRRIEEAGAQDYIRLKGHAD-----LSQIYAGYELYLTASTSEGFGLTLMEAVGS 416 + +K + E G + + G + Q L S EGF +TL+EA+ Sbjct: 221 DFEKCQAYSRELGIEQRVIWYGWQSAPWQVVQQKIKNVTALLLTSAFEGFPMTLLEAMSY 280 Query: 417 GLPLIGFDVRYGNQTFIDDGKNGYL 441 G+P I D G + I G NG L Sbjct: 281 GIPCISSDCMSGPRDMIKPGLNGEL 305 >3C4V-A nrPDB Length = 426 Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 4/105 (3%) Query: 358 GKGSEEDKLRRRIEEAGAQDYIRL---KGHADLSQIYAGYELYLTASTSEGFGLTLMEAV 414 G + D R EE G + IR + ++L +Y ++ S +E FGL MEA Sbjct: 267 GPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQ 326 Query: 415 GSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVE 459 SG P+I V G + +G+ G L+ S H +A ++ Sbjct: 327 ASGTPVIAARV-GGLPIAVAEGETGLLVDGHSPHAWADALATLLD 370 >4RBN-A nrPDB Length = 794 Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 12/108 (11%) Query: 396 LYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQT-FIDDGKNGYLLPVSSNHVEDQII 454 +++ + E FGLT++EA+ SGLP F RYG I + ++G+ + + +I Sbjct: 655 IFVQPALFEAFGLTIIEAMASGLPT--FATRYGGPLEIIQNNRSGFHIDPNQGAATADLI 712 Query: 455 AAFVEKII------ALFSQGRQQEM-SQHSYQV-AENYLT-SRVEAAW 493 A F EK + SQG + S++++++ AE +T SR+ W Sbjct: 713 ADFFEKNLENPQEWERISQGALDRVASRYTWKLYAERMMTLSRIYGFW 760 >2X6Q-A nrPDB Length = 416 Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 15/147 (10%) Query: 316 EPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDK---------L 366 +P KP + SR K I ++ + ++P + L + G + +D L Sbjct: 228 DPEKPI-ITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTL 286 Query: 367 RRRIEEAGAQDYIRLKG-HA-DLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFD 424 R+ E+ + L G HA +++ ++ L S EGFGLT+ EA+ G P+IG Sbjct: 287 RKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRA 346 Query: 425 VRYGNQTF-IDDGKNGYLLPVSSNHVE 450 V G F I DG+ G+L+ ++ VE Sbjct: 347 V--GGIKFQIVDGETGFLVRDANEAVE 371 >2IW1-A nrPDB Length = 374 Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 8/130 (6%) Query: 342 TVQAHAQLPEL----TLDIYGKGSEEDKLRRRIEEAGAQDYIRL-KGHADLSQIYAGYEL 396 +++A A LPE TL + K E+ G + + G D+S++ A +L Sbjct: 214 SIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADL 273 Query: 397 YLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLL--PVSSNHVEDQII 454 L + E G+ L+EA+ +GLP++ V G +I D G ++ P S + + + Sbjct: 274 LLHPAYQEAAGIVLLEAITAGLPVLTTAV-CGYAHYIADANCGTVIAEPFSQEQLNEVLR 332 Query: 455 AAFVEKIIAL 464 A + + + Sbjct: 333 KALTQSPLRM 342 >3OKC-A nrPDB Length = 394 Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust. Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 18/108 (16%) Query: 327 SRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGA----------Q 376 SRL K D L+ A Q A P+ L I G G E LRR + Q Sbjct: 205 SRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQ 264 Query: 377 DYIRLKGHADLSQIYA---GYELYLTASTSEGFGLTLMEAVGSGLPLI 421 D I AD+ + A G L + EG G+ +EA G+P+I Sbjct: 265 DMINTLAAADIFAMPARTRGGGLDV-----EGLGIVYLEAQACGVPVI 307 >2R60-A nrPDB Length = 499 Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust. Identities = 53/195 (27%), Positives = 80/195 (41%), Gaps = 36/195 (18%) Query: 322 SMITASRLATEKHIDWLVAATVQAHA--QLPELTLDIYG----------KGSEEDKLRRR 369 ++I +SRL +K+ LV A VQ L L + G G EE ++ + Sbjct: 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGK 323 Query: 370 IEE-------AGAQDYIRLKGHADLSQIYAGYELYLTASTS--------EGFGLTLMEAV 414 I E G L +L+ YA YL + S E FGL +EA+ Sbjct: 324 IIELIDNNDCRGKVSMFPLNSQQELAGCYA----YLASKGSVFALTSFYEPFGLAPVEAM 379 Query: 415 GSGLPLIGFDVRYGNQTFIDDGKNGYLL-PVSSNHVEDQIIAAF--VEKIIALFSQGRQQ 471 SGLP + G +D GK G L+ P + ++ AF E A +G+Q+ Sbjct: 380 ASGLPAV-VTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFESEETWSAYQEKGKQR 438 Query: 472 EMSQHSYQ-VAENYL 485 ++++Q A YL Sbjct: 439 VEERYTWQETARGYL 453 >5XGU-B nrPDB Length = 645 Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 21/41 (51%) Query: 77 TTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYL 117 T + DQVLAQ G + +E +IVR P+ Q + Y Sbjct: 37 TCIHGDQVLAQPLGVDRKGRREARIVRVLVPKTSQIVGRYF 77 >6ICZ-I nrPDB Length = 855 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 18/37 (48%) Query: 236 KLGVVVHAEHFSENASSDDYILWNNFYDYQFTNADKV 272 +L VV+ E F A +Y LW+ D N DKV Sbjct: 199 RLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKV 235 >1O7D-A nrPDB Length = 298 Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 10/97 (10%) Query: 41 DMILADNIQHLTENIGFLDEEIIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGK 100 DM+ + H +++G+L + Y + +I+ A LD V++ + P R Sbjct: 12 DMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTR------ 65 Query: 101 IVRYFYPQDDQFITCYLRQEDQDSVEHV-EYVSRGRL 136 R+ Y + F + + RQ+ + + V E V +GRL Sbjct: 66 --RFIY-VEIAFFSRWWRQQTNATQKIVRELVRQGRL 99 >2CGE-A nrPDB Length = 405 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 9/56 (16%) Query: 353 TLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGL 408 T +I K +L++R++E GAQD K DL+++ LY TA + GF L Sbjct: 340 TFEISPKSPIIKELKKRVDEGGAQD----KTVKDLTKL-----LYETALLTSGFSL 386 >2CG9-A nrPDB Length = 677 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 9/56 (16%) Query: 353 TLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGL 408 T +I K +L++R++E GAQD K DL+++ LY TA + GF L Sbjct: 612 TFEISPKSPIIKELKKRVDEGGAQD----KTVKDLTKL-----LYETALLTSGFSL 658 >5E9U-B nrPDB Length = 446 Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 24/109 (22%) Query: 127 HVEYVSRGRLIRK----DYFSYVRYASEY------FA--PHNDAATLYQRRFYHEDGS-- 172 H +RGRL+++ D +R + Y FA + + +Y DG Sbjct: 92 HYASQARGRLVKQVDWLDKKGQLRLSERYNKQGRCFAKTAYKSGQEAFNTTYYSTDGQER 151 Query: 173 -----VAYDMLIEDGQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVV 216 V D+++ QE P RIF S+ + +R+FL+ L L D ++ Sbjct: 152 IVENHVTGDIILTLDQE-----PLRIFKSRVDFIRFFLERLDLDLDHIL 195 >2A1X-A nrPDB Length = 308 Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 19/33 (57%) Query: 156 NDAATLYQRRFYHEDGSVAYDMLIEDGQEKLYR 188 N+ TL QR+FY E+G + L+ D + +R Sbjct: 20 NNVLTLEQRKFYEENGFLVIKNLVPDADIQRFR 52 >5BXY-A nrPDB Length = 158 Score = 28.1 bits (61), Expect = 8.6, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 365 KLRRRIEEAGAQDYIRLKG----HADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPL 420 K R+ +EAG D + + AD+S+ LYL S ++ L E + G P+ Sbjct: 62 KARKNAKEAGVADLVEFRQGDLFEADISEATV-VTLYLLPSVNQKLRPILFEQLSPGTPV 120 Query: 421 IGFDVRYG 428 + D G Sbjct: 121 VSHDFDMG 128 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5E9U-A nrPDB 770 0.0 4PQG-A nrPDB 712 0.0 4WAD-A nrPDB 396 e-110 4XYW-A nrPDB 189 3e-48 6D9T-A nrPDB 179 4e-45 5N7Z-A nrPDB 162 4e-40 5D01-A nrPDB 155 3e-38 2JJM-A nrPDB 154 9e-38 3C4V-A nrPDB 136 4e-32 Sequences not found previously or not previously below threshold: 2X6Q-A nrPDB 79 6e-15 3OKC-A nrPDB 75 7e-14 2BIS-A nrPDB 71 1e-12 6HLP-A nrPDB 69 7e-12 5WS3-A nrPDB 68 7e-12 6FJ3-A nrPDB 68 8e-12 5U09-A nrPDB 68 8e-12 4ZJC-A nrPDB 68 8e-12 2GEJ-A nrPDB 68 1e-11 4RBN-A nrPDB 66 4e-11 3S27-A nrPDB 65 8e-11 2IW1-A nrPDB 61 1e-09 2R60-A nrPDB 50 3e-06 6GNE-A nrPDB 47 1e-05 6GNG-A nrPDB 39 0.007 4HLN-A nrPDB 38 0.011 5E9U-B nrPDB 33 0.26 1NKV-A nrPDB 33 0.26 1RZV-A nrPDB 32 0.46 5BXY-A nrPDB 31 1.1 2FHK-A nrPDB 30 1.8 5XGU-B nrPDB 29 3.7 3BFR-A nrPDB 29 4.5 >5E9U-A nrPDB Length = 503 Score = 770 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 501/502 (99%), Positives = 501/502 (99%) Query: 2 TVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDEE 61 TVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDEE Sbjct: 2 TVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDEE 61 Query: 62 IIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQED 121 IIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQED Sbjct: 62 IIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQED 121 Query: 122 QDSVEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIED 181 QD VEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIED Sbjct: 122 QDFVEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIED 181 Query: 182 GQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVVV 241 GQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVVV Sbjct: 182 GQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVVV 241 Query: 242 HAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQIA 301 HAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQIA Sbjct: 242 HAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQIA 301 Query: 302 TIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGS 361 TIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGS Sbjct: 302 TIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGS 361 Query: 362 EEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLI 421 EEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLI Sbjct: 362 EEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLI 421 Query: 422 GFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVA 481 GFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVA Sbjct: 422 GFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVA 481 Query: 482 ENYLTSRVEAAWTQLLKEVRDD 503 ENYLTSRVEAAWTQLLKEVRDD Sbjct: 482 ENYLTSRVEAAWTQLLKEVRDD 503 >4PQG-A nrPDB Length = 511 Score = 712 bits (1837), Expect = 0.0, Method: Composition-based stats. Identities = 322/503 (64%), Positives = 397/503 (78%) Query: 1 MTVYNINLGIGWASSGVEYAQAYRAQILRRIQQPAKFIFMDMILADNIQHLTENIGFLDE 60 MT+YNINLGIGWASSGVEYAQAYRA + R++ +KFIF DMILADNIQHLT NIGF D Sbjct: 9 MTIYNINLGIGWASSGVEYAQAYRAGVFRKLNLSSKFIFTDMILADNIQHLTANIGFDDN 68 Query: 61 EIIWLYNYFTDIKIAPTTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQE 120 ++IWLYN+FTDIKIAPT+VT+D VLA G+ EK GK++R F+ D+F+TCYL E Sbjct: 69 QVIWLYNHFTDIKIAPTSVTVDDVLAYFGGEESHREKNGKVLRVFFFDQDKFVTCYLVDE 128 Query: 121 DQDSVEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAATLYQRRFYHEDGSVAYDMLIE 180 ++D V+H EYV +G LIRKDYFSY RY SEYFAP ++ A LYQR FY+EDG+ YD+L+ Sbjct: 129 NKDLVQHAEYVFKGNLIRKDYFSYTRYCSEYFAPKDNVAVLYQRTFYNEDGTPVYDILMN 188 Query: 181 DGQEKLYRFPDRIFYSKAELVRYFLQCLQLQADDVVILDRETGIGQVVFEESQKAKLGVV 240 G+E++Y F D+IFY K VR F++ L L D+VILDRETGIGQVVFEE+Q A L VV Sbjct: 189 QGKEEVYHFKDKIFYGKQAFVRAFMKSLNLNKSDLVILDRETGIGQVVFEEAQTAHLAVV 248 Query: 241 VHAEHFSENASSDDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQI 300 VHAEH+SENA+++DYILWNN+YDYQFTNADKVDFFIV+T+ Q +L++QF Y+ QP+I Sbjct: 249 VHAEHYSENATNEDYILWNNYYDYQFTNADKVDFFIVSTDRQNEVLQEQFAKYTQHQPKI 308 Query: 301 ATIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKG 360 TIPVGS+D LT + RKP+S+ITASRLA EKHIDWLV A ++AH +LPELT DIYG G Sbjct: 309 VTIPVGSIDSLTDSSQGRKPFSLITASRLAKEKHIDWLVKAVIEAHKELPELTFDIYGSG 368 Query: 361 SEEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPL 420 E+ LR I A+DYI+LKGHA+LSQIY+ YE+YLTASTSEGFGLTLMEA+GSGLPL Sbjct: 369 GEDSLLREIIANHQAEDYIQLKGHAELSQIYSQYEVYLTASTSEGFGLTLMEAIGSGLPL 428 Query: 421 IGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQV 480 IGFDV YGNQTFI+DG+NGYL+P SS+HVEDQI A+ KI L+ + R + M +SYQ+ Sbjct: 429 IGFDVPYGNQTFIEDGQNGYLIPSSSDHVEDQIKQAYAAKICQLYQENRLEAMRAYSYQI 488 Query: 481 AENYLTSRVEAAWTQLLKEVRDD 503 AE +LT + W + ++EV D Sbjct: 489 AEGFLTKEILEKWKKTVEEVLHD 511 >4WAD-A nrPDB Length = 498 Score = 396 bits (1017), Expect = e-110, Method: Composition-based stats. Identities = 106/412 (25%), Positives = 182/412 (44%), Gaps = 31/412 (7%) Query: 96 EKEGKIVRYFYPQDDQFITCYLRQEDQDSVEHVEYVSRGRLIRKDYFSYVRYASEYFAPH 155 E+ I RYF +I Y+R+ + V +++ + I + FS++ Sbjct: 108 EESKGISRYFDITTGTYI-AYIRKSKSEKV--IDFFKDNKRIER--FSFIDNKVHMKETF 162 Query: 156 N-DAATLYQRRFYHEDGSV--AYDMLIEDGQ-EKLYRFPDRI-FYSKAELVRYFLQCLQL 210 N D YQ FY E G + ++ +G K Y ++ F + L Y+L+ L Sbjct: 163 NVDNKVCYQV-FYDEKGYPYISRNINANNGAVGKTYVLVNKKEFKNNLALCVYYLEKLIK 221 Query: 211 QADDVVILDRETGIGQVVFEESQKA--KLGVVVHAEHFSENASSDDYILWNNFYDYQFTN 268 + D +++ G +F + K K GV+ H + + + DD + Y N Sbjct: 222 DSKDSIMICDGPGSFPKMFNTNHKNAQKYGVI----HVNHHENFDDTGAFKKSEKYIIEN 277 Query: 269 ADKVDFFIVATEAQKRILEQQFQHYSDKQPQIATIPVGSLDQLTYPKEPRKPYSMITASR 328 A+K++ IV TEAQ+ + QF I TI + PK + + SR Sbjct: 278 ANKINGVIVLTEAQRLDILNQFD-----VENIFTIS-NFVKIHNAPKHFQTEKIVGHISR 331 Query: 329 LATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHADLS 388 + K ID L+ + + IYG+GS +DK+ + IE+ + + LKG+ Sbjct: 332 MVPTKRIDLLIEVAELVVKKDNAVKFHIYGEGSVKDKIAKMIEDKNLERNVFLKGYTTTP 391 Query: 389 Q-IYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSS- 446 Q ++L ++ S EG GL+++EA+ S P++ FD++YG FI+D KNGYL+ + Sbjct: 392 QKCLEDFKLVVSTSQYEGQGLSMIEAMISKRPVVAFDIKYGPSDFIEDNKNGYLIENHNI 451 Query: 447 NHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSRVEAAWTQLLK 498 N + D+I+ ++A + +E + E Y T + W L Sbjct: 452 NDMADKILQLVNNDVLAAEFGSKARE------NIIEKYSTESILEKWLNLFN 497 >4XYW-A nrPDB Length = 338 Score = 189 bits (480), Expect = 3e-48, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%) Query: 283 KRILEQQFQHYSDKQPQIATIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAAT 342 K ++ ++ K+P+I T+ S+ Q+ + Y ++ RL K + L Sbjct: 143 KNDEKKAIENIGIKEPKIITVS-NSVPQMPRCNNKQLQYKVLFVGRLTHPKRPELLANVI 201 Query: 343 VQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHADLSQIYAGYELYLTAST 402 ++ P+ +L I G G + L+++ E + I G + Y Y+L+ S Sbjct: 202 ----SKKPQYSLHIVGGGERLESLKKQFSEC---ENIHFLGEVNNFYNYHEYDLFSLISD 254 Query: 403 SEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKII 462 SEG ++ +EA + +PL+ DV G + +G NG L+ + ED I ++KI Sbjct: 255 SEGLPMSGLEAHTAAIPLLLSDV--GGCFELIEG-NGLLVE----NTEDD-IGYKLDKIF 306 Query: 463 ALFSQGRQQEMSQHSYQVAENYLTS 487 + R+Q + V ENY ++ Sbjct: 307 DDYENYREQAIRASGKFVIENYASA 331 >6D9T-A nrPDB Length = 400 Score = 179 bits (453), Expect = 4e-45, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 6/182 (3%) Query: 320 PYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYI 379 +I S K ID ++ + ++P L + G G E +R+ +E ++ + Sbjct: 216 EKVLIHVSNFRQVKRIDTIIETFAKVREKIPS-KLILLGDGPELVPMRQLTKELNVEEDV 274 Query: 380 RLKGHAD-LSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKN 438 G D +S+ Y +L L S E FGLTL+EA+ +G+ IG + G + I G+ Sbjct: 275 LFLGKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGVVPIGSNAG-GIKEVIKHGET 333 Query: 439 GYLLPVS-SNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSRVEAAWTQLL 497 G+++ V + D I +K+ L+++ ++ ++ + + +T + E + ++L Sbjct: 334 GFVVDVGDCDSASDYAIRLLEDKV--LYNKLQKNMLADIAERFGSELITDQYEYYYQKML 391 Query: 498 KE 499 E Sbjct: 392 NE 393 >5N7Z-A nrPDB Length = 359 Score = 162 bits (409), Expect = 4e-40, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 67/186 (36%), Gaps = 15/186 (8%) Query: 286 LEQQFQHYSDKQPQIATI--PVGSLDQLTYPKEPRKPYSMITASRLATE--KHIDWLVAA 341 +++Q I+ + PV + P E KP + RL E K + L Sbjct: 144 IKEQIMARGISAQDISVVYNPVSIKTVIVPPPERDKPAVFLYVGRLKFEGQKRVKDLFDG 203 Query: 342 TVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHAD-----LSQIYAGYEL 396 + E L I G GS+ +K + E G + + G + Q Sbjct: 204 LARTTG---EWQLHIIGDGSDFEKCQAYSRELGIEQRVIWYGWQSAPWQVVQQKIKNVTA 260 Query: 397 YLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAA 456 L S EGF +TL+EA+ G+P I D G + I G NG L + D + Sbjct: 261 LLLTSAFEGFPMTLLEAMSYGIPCISSDCMSGPRDMIKPGLNGEL---YTPGAIDDFVGH 317 Query: 457 FVEKII 462 I Sbjct: 318 LNRVIS 323 >5D01-A nrPDB Length = 379 Score = 155 bits (392), Expect = 3e-38, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 100/247 (40%), Gaps = 13/247 (5%) Query: 259 NNFYDYQFTNADKVDFFIVATEAQKRIL---EQQFQHYSDKQPQIATIPVGSLDQLTYPK 315 + + ++D+V A A+ L E++ + + + + + Sbjct: 137 KDLIRFAIESSDRVTAVSSALAAETYDLIKPEKKIETIYNFIDERVYLKKNTAAIKEKHG 196 Query: 316 EPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGA 375 +I S K + ++ + + L + G G E+ I + G Sbjct: 197 ILPDEKVVIHVSNFRKVKRVQDVIRVFRNIAGK-TKAKLLLVGDGPEKSTACELIRKYGL 255 Query: 376 QDYIRLKGHAD-LSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFID 434 +D + + G+ D + +Y+ +L L S E FGL L+EA+ G+P IG ++ G I Sbjct: 256 EDQVLMLGNQDRVEDLYSISDLKLLLSEKESFGLVLLEAMACGVPCIGTNIG-GIPEVIK 314 Query: 435 DGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTS-RVEAAW 493 + +G+L+ V + AA + L + ++ + ++ EN +S ++ + + Sbjct: 315 NNVSGFLVDVG------DVTAATARAMSILEDEQLSNRFTKAAIEMLENEFSSKKIVSQY 368 Query: 494 TQLLKEV 500 Q+ ++ Sbjct: 369 EQIYADL 375 >2JJM-A nrPDB Length = 394 Score = 154 bits (389), Expect = 9e-38, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 10/188 (5%) Query: 318 RKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQD 377 +I S K + +V A + ++ + L + G G E + + ++ +D Sbjct: 209 ESEKILIHISNFRKVKRVQDVVQAFAKIVTEV-DAKLLLVGDGPEFCTILQLVKNLHIED 267 Query: 378 YIRLKGHAD-LSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDG 436 + G D ++++ A +L L S E FGL L+EA+ G+P IG V G I G Sbjct: 268 RVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG-GIPEVIQHG 326 Query: 437 KNGYLLPVS-SNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSRVEAAWTQ 495 GYL V + V DQ I + + + + V E + + ++ + + Sbjct: 327 DTGYLCEVGDTTGVADQAIQLLKD------EELHRNMGERARESVYEQFRSEKIVSQYET 380 Query: 496 LLKEVRDD 503 + +V D Sbjct: 381 IYYDVLRD 388 >3C4V-A nrPDB Length = 426 Score = 136 bits (341), Expect = 4e-32, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 78/213 (36%), Gaps = 26/213 (12%) Query: 270 DKVDFFIVATEAQKRILEQQFQHYSDKQPQIATIPVGSLDQLTYPKEPRKP--------- 320 D D V T+ + + L HY +I+ + G+ +L P R Sbjct: 163 DNADVLAVNTQEEMQDLMH---HYDADPDRISVVSPGADVELYSPGNDRATERSRRELGI 219 Query: 321 ----YSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIY------GKGSEEDKLRRRI 370 + RL K L+ A + P+ L + G + D R Sbjct: 220 PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMA 279 Query: 371 EEAGAQDYIRLK---GHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRY 427 EE G + IR ++L +Y ++ S +E FGL MEA SG P+I V Sbjct: 280 EELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVG- 338 Query: 428 GNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEK 460 G + +G+ G L+ S H +A ++ Sbjct: 339 GLPIAVAEGETGLLVDGHSPHAWADALATLLDD 371 >2X6Q-A nrPDB Length = 416 Score = 78.6 bits (192), Expect = 6e-15, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 86/196 (43%), Gaps = 20/196 (10%) Query: 316 EPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYG----KGSE-----EDKL 366 +P KP + SR K I ++ + ++P + L + G E E L Sbjct: 228 DPEKP-IITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTL 286 Query: 367 RRRIEEAGAQDYIRLKG--HADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFD 424 R+ E+ + L G +++ ++ L S EGFGLT+ EA+ G P+IG Sbjct: 287 RKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIG-R 345 Query: 425 VRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENY 484 G + I DG+ G+L+ ++ VE ++ ++ + ++ ++ +V +N+ Sbjct: 346 AVGGIKFQIVDGETGFLVRDANEAVE--VVLYLLK-----HPEVSKEMGAKAKERVRKNF 398 Query: 485 LTSRVEAAWTQLLKEV 500 + ++ + +L + Sbjct: 399 IITKHMERYLDILNSL 414 >3OKC-A nrPDB Length = 394 Score = 75.1 bits (183), Expect = 7e-14, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 14/144 (9%) Query: 327 SRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKG--- 383 SRL K D L+ A Q A P+ L I G G E LRR + ++ G Sbjct: 205 SRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATD--VSQNVKFLGRLE 262 Query: 384 HADLSQIYAGYELYLTAS-------TSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDG 436 + D+ A +++ + EG G+ +EA G+P+I +T Sbjct: 263 YQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP-- 320 Query: 437 KNGYLLPVSSNHVEDQIIAAFVEK 460 G ++ S +++ ++ Sbjct: 321 ATGLVVEGSDVDKLSELLIELLDD 344 >2BIS-A nrPDB Length = 440 Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 12/176 (6%) Query: 322 SMITASRL-ATEKHIDWLVAATVQAHAQLP--ELTLDIYGKG-SEEDKLRRRIEEAGAQD 377 + + R +K +D L+ A ++ E+ I GKG E + R +EE Sbjct: 254 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNV 313 Query: 378 YIR--LKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDD 435 + + + ++Y + + S E FGL +EA+ G I V G + I Sbjct: 314 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG-GLRDIIT- 371 Query: 436 GKNGYLLPVSSN----HVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTS 487 + G L+ + + + + +++ MS + AE Y+ + Sbjct: 372 NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKA 427 >6HLP-A nrPDB Length = 520 Score = 68.6 bits (166), Expect = 7e-12, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 9/173 (5%) Query: 322 SMITASRL-ATEKHIDWLVAATVQAHAQLP--ELTLDIYGKG-SEEDKLRRRIEEAGAQD 377 + + R +K +D L+ A ++ E+ I GKG E + R +EE Sbjct: 260 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNV 319 Query: 378 YIR--LKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDD 435 + + + ++Y + + S E FGL +EA+ G I V G + I Sbjct: 320 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG-GLRDIIT- 377 Query: 436 GKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSR 488 + G L+ I +E + S+ R+ + + +E +R Sbjct: 378 NETGILVKAGDPGELANAILKALELSRSDLSKFREN-CKKRAMSFSEQVSAAR 429 >5WS3-A nrPDB Length = 560 Score = 68.2 bits (165), Expect = 7e-12, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 11/178 (6%) Query: 322 SMITASRL-ATEKHIDWLVAATVQAHAQLP--ELTLDIYGKG-SEEDKLRRRIEEAGAQD 377 + + R +K +D L+ A ++ E+ I GKG E + R +EE Sbjct: 295 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNV 354 Query: 378 YIR--LKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDD 435 + + + ++Y + + S E FGL +EA+ G I V G + I Sbjct: 355 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG-GLRDIIT- 412 Query: 436 GKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQ---EMSQHSYQVAENYLTSRVE 490 + G L+ I +E + S+ R+ S Q+ T+R+ Sbjct: 413 NETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSKQIRARRKTARML 470 >6FJ3-A nrPDB Length = 602 Score = 68.2 bits (165), Expect = 8e-12, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 8/156 (5%) Query: 322 SMITASRL-ATEKHIDWLVAATVQAHAQLP--ELTLDIYGKG-SEEDKLRRRIEEAGAQD 377 + + R +K +D L+ A ++ E+ I GKG E + R +EE Sbjct: 357 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNV 416 Query: 378 YIR--LKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDD 435 + + + ++Y + + S E FGL +EA+ G I V G + I Sbjct: 417 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG-GLRDIIT- 474 Query: 436 GKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQ 471 + G L+ I +E + S+ R+ Sbjct: 475 NETGILVKAGDPGELANAILKALELSRSDLSKFREN 510 >5U09-A nrPDB Length = 508 Score = 68.2 bits (165), Expect = 8e-12, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 8/156 (5%) Query: 322 SMITASRL-ATEKHIDWLVAATVQAHAQLP--ELTLDIYGKG-SEEDKLRRRIEEAGAQD 377 + + R +K +D L+ A ++ E+ I GKG E + R +EE Sbjct: 247 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNV 306 Query: 378 YIR--LKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDD 435 + + + ++Y + + S E FGL +EA+ G I V G + I Sbjct: 307 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG-GLRDIIT- 364 Query: 436 GKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQ 471 + G L+ I +E + S+ R+ Sbjct: 365 NETGILVKAGDPGELANAILKALELSRSDLSKFREN 400 >4ZJC-A nrPDB Length = 553 Score = 68.2 bits (165), Expect = 8e-12, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 8/156 (5%) Query: 322 SMITASRL-ATEKHIDWLVAATVQAHAQLP--ELTLDIYGKG-SEEDKLRRRIEEAGAQD 377 + + R +K +D L+ A ++ E+ I GKG E + R +EE Sbjct: 288 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNV 347 Query: 378 YIR--LKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDD 435 + + + ++Y + + S E FGL +EA+ G I V G + I Sbjct: 348 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG-GLRDIIT- 405 Query: 436 GKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQ 471 + G L+ I +E + S+ R+ Sbjct: 406 NETGILVKAGDPGELANAILKALELSRSDLSKFREN 441 >2GEJ-A nrPDB Length = 406 Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 16/236 (6%) Query: 270 DKVDFFIVATEAQKRILEQQFQHYSDKQPQIATIPVGSLDQLTYPKEPRKPYSMITASRL 329 +K+ I ++ +R + + + P + D PR+ +++ R Sbjct: 159 EKIIGRIAVSDLARRWQMEALGSDAVEIPNGVDVA-SFADAPLLDGYPREGRTVLFLGRY 217 Query: 330 ATEKH-IDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHADLS 388 + + L+AA + A+ P++ + I G+G E D+LR + + ++R G D + Sbjct: 218 DEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAG--HLRFLGQVDDA 274 Query: 389 QI---YAGYELYLTAS-TSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPV 444 ++Y E FG+ L+EA+ +G ++ D+ + + DG G L+PV Sbjct: 275 TKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL-DAFRRVLADGDAGRLVPV 333 Query: 445 SSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSRVEAAWTQLLKEV 500 D I L + + + Y S V A ++ + V Sbjct: 334 ------DDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIMRVYETV 383 >4RBN-A nrPDB Length = 794 Score = 65.9 bits (159), Expect = 4e-11, Method: Composition-based stats. Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 25/210 (11%) Query: 308 LDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEED--- 364 L Y ++P KP T +RL K+I LV + L I G + Sbjct: 548 LPARGYLQDPDKPLIF-TMARLDRIKNITGLVELYAASPRLRSLANLVIVGGKIDPQHSS 606 Query: 365 ---------KLRRRIEEAGAQDYIRLKG----HADLSQIYAGYE----LYLTASTSEGFG 407 ++ + ++E +R G ++Y +++ + E FG Sbjct: 607 DHEEQEQIHRMHQLMDEHELDQQVRWLGMRLDKNLAGELYRYIADKRGIFVQPALFEAFG 666 Query: 408 LTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQ 467 LT++EA+ SGLP G I + ++G+ + + +IA F EK L + Sbjct: 667 LTIIEAMASGLPTFATRYG-GPLEIIQNNRSGFHIDPNQGAATADLIADFFEK--NLENP 723 Query: 468 GRQQEMSQHSY-QVAENYLTSRVEAAWTQL 496 + +SQ + +VA Y L Sbjct: 724 QEWERISQGALDRVASRYTWKLYAERMMTL 753 >3S27-A nrPDB Length = 816 Score = 64.7 bits (156), Expect = 8e-11, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 23/222 (10%) Query: 287 EQQFQHYSDKQPQIATIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAH 346 +++ + + ++ V + + L K+ +KP + T +RL K++ LV + Sbjct: 540 KRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKP-ILFTMARLDRVKNLSGLVEWYGKNT 598 Query: 347 AQLPELTLDIYG--------KGSEEDKLRRR---IEEAGAQDYIRLKGHA----DLSQIY 391 L + G E+ ++++ IEE R ++Y Sbjct: 599 RLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELY 658 Query: 392 A----GYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSN 447 ++ + E FGLT++EA+ GLP + G I GK+G+ + Sbjct: 659 RYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVHGKSGFHIDPYHG 717 Query: 448 HVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVAENYLTSRV 489 +A F K E+S+ Q E T ++ Sbjct: 718 DQAADTLADFFTKCK--EDPSHWDEISKGGLQRIEEKYTWQI 757 >2IW1-A nrPDB Length = 374 Score = 61.3 bits (147), Expect = 1e-09, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 74/203 (36%), Gaps = 20/203 (9%) Query: 255 YILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQPQIATIPVGSLD----- 309 Y + F F K ++ T+ Q ++ HY + + +P G Sbjct: 121 YRHYAAFERATFEQG-KSTKLMMLTDKQIADFQK---HYQTEPERFQILPPGIYPDRKYS 176 Query: 310 -QLTYPKE--------PRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKG 360 Q+ +E + ++ K +D + A L TL Sbjct: 177 EQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQ 236 Query: 361 SEEDKLRRRIEEAGAQDYIRLK-GHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLP 419 + K E+ G + + G D+S++ A +L L + E G+ L+EA+ +GLP Sbjct: 237 DKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLP 296 Query: 420 LIGFDVRYGNQTFIDDGKNGYLL 442 ++ V G +I D G ++ Sbjct: 297 VLTTAV-CGYAHYIADANCGTVI 318 >2R60-A nrPDB Length = 499 Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 29/211 (13%) Query: 315 KEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSE------------ 362 E + ++I +SRL +K+ LV A VQ + L + +G E Sbjct: 257 SERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQE 316 Query: 363 ----EDKLRRRIEEAGAQDYIRLKG---HADLSQIYA----GYELYLTASTSEGFGLTLM 411 K+ I+ + + + +L+ YA ++ S E FGL + Sbjct: 317 EKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPV 376 Query: 412 EAVGSGLPLIGFDVRYGNQTFIDDGKNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQ 471 EA+ SGLP + G +D GK G L+ + I ++ + + Q Sbjct: 377 EAMASGLPAVVTR-NGGPAEILDGGKYGVLVDPEDP---EDIARGLLKAFESEETWSAYQ 432 Query: 472 EMSQHSYQVAENYLTSRVEAAWTQLLKEVRD 502 E + +V E Y + ++++E+ D Sbjct: 433 E--KGKQRVEERYTWQETARGYLEVIQEIAD 461 >6GNE-A nrPDB Length = 508 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 65/200 (32%), Gaps = 17/200 (8%) Query: 316 EPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGS------EEDKLRRR 369 E R+P + +RL +K + + A + + G E + + ++ Sbjct: 306 ESRRP-LVGCITRLVPQKGVHLIRHAIYRTLE--LGGQFVLLGSSPVPHIQREFEGIEQQ 362 Query: 370 IEEAGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGN 429 + + A IYA +L++ S E GLT M A+ G I N Sbjct: 363 FKSHDHVRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLN 422 Query: 430 QTF--IDDG------KNGYLLPVSSNHVEDQIIAAFVEKIIALFSQGRQQEMSQHSYQVA 481 + IDD +NG+ + + + + + S + Sbjct: 423 DSVFDIDDDTIPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFS 482 Query: 482 ENYLTSRVEAAWTQLLKEVR 501 ++ E +T+ + R Sbjct: 483 WGSSATQYEELYTRSVSRAR 502 >6GNG-A nrPDB Length = 612 Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 39/117 (33%), Gaps = 7/117 (5%) Query: 323 MITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAG----AQDY 378 + RL +K D +V A L + YG G E+ + + E A+ Sbjct: 371 IAFVGRLDDQKGADCMVEAMPYLVNTLGA-QVVCYGSGREDMAAKFKALEKQFPGMAKGK 429 Query: 379 IRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDD 435 + + AG + L S E GL + A+ G I G + + Sbjct: 430 TAFVPKEE-HTLMAGADYVLMPSRFEPCGLVQLHAMKYGAVPIVS-CTGGLKDSVIP 484 >4HLN-A nrPDB Length = 633 Score = 37.8 bits (86), Expect = 0.011, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 12/118 (10%) Query: 323 MITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKG-SEEDKLRRRIEEAGAQDYIRL 381 + RL +K ID + A + ++ + G G + R E + Sbjct: 443 IGFIGRLDYQKGIDLIKMAIPDLMRE--DVQFVMLGSGDPVFEGWMRSTESSYKDK---F 497 Query: 382 KGHADLS-----QIYAGYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFID 434 +G S +I AG ++ L S E GL + A+ G + G + ++ Sbjct: 498 RGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTG-GLRDTVE 554 >5E9U-B nrPDB Length = 446 Score = 33.2 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 62/365 (16%), Positives = 122/365 (33%), Gaps = 65/365 (17%) Query: 100 KIVRYFYPQDDQFITCYLRQEDQDSVEHVEYVSRGRLIRKDYFSYVRYASEYFAPHNDAA 159 ++ R +++ Y Q V+ V+++ + +R + + Sbjct: 77 QVARVSDMGEERARIHYASQARGRLVKQVDWLDKKGQLRLSERYNKQGRCFAKTAYKSGQ 136 Query: 160 TLYQRRFYHEDG-------SVAYDMLIEDGQEKLYRFPDRIFYSKAELVRYFLQCLQLQA 212 + +Y DG V D+++ QE P RIF S+ + +R+FL+ L L Sbjct: 137 EAFNTTYYSTDGQERIVENHVTGDIILTLDQE-----PLRIFKSRVDFIRFFLERLDLDL 191 Query: 213 DDVV----------------------------ILDRETGIGQVVFEESQKAKLGVVVHAE 244 D ++ + D G Q++ + SQ +V+ Sbjct: 192 DHILFNSLAYSFLVSHSLTGRAGQDILFWQEPLYDELPGNMQLILDNSQLRTQTIVIPDL 251 Query: 245 HFSENASS-------DDYILWNNFYDYQFTNADKVDFFIVATEAQKRILEQQFQHYSDKQ 297 E A S ++ YD++ N + D I+ Q + Sbjct: 252 ATYEKAMSLAAADQQQKFLHLGYHYDFKRDNYLRKDALILTHSDQ----IEGLDTLVQSL 307 Query: 298 PQIATIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIY 357 PQ+ + +L +++ Y + + A+ K I+ L ++ LDI Sbjct: 308 PQLV-FRIAALTEMSPKLLSMLSYKNVVLYQNASLKQIEQLY--------LESDIYLDIN 358 Query: 358 GKGSEEDKLRRRIEE----AGAQDYIRLKGHADLSQIYAGYELYLTASTSEGFGLTLMEA 413 G +R+ E G + + + + I+ + AS E L +E Sbjct: 359 HGGQVLQAVRKAFENNLLILGFEQTLHDRHYIAQQHIFDSSQPAQLASILEE-ALCGVEQ 417 Query: 414 VGSGL 418 + S L Sbjct: 418 MRSAL 422 >1NKV-A nrPDB Length = 256 Score = 33.2 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 11/91 (12%) Query: 298 PQIATIPVGSLDQLTYPKEPRKPYSMITASRLATEKHIDWLVAATVQAHAQLPELTLD-- 355 P+I TI E K ++ R+ I L + + + L D Sbjct: 4 PRIFTISESEHRIHNPFTE-EKYATLGRVLRMKPGTRILDLGSGSGEM---LCTWARDHG 59 Query: 356 IYGKGSEEDKL-----RRRIEEAGAQDYIRL 381 I G G + L +RR EE G + + Sbjct: 60 ITGTGIDMSSLFTAQAKRRAEELGVSERVHF 90 >1RZV-A nrPDB Length = 485 Score = 32.4 bits (72), Expect = 0.46, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 1/112 (0%) Query: 326 ASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYIRLKGHA 385 SRL +K ID + A + + L + G + E L + + + + Sbjct: 297 ISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNE 356 Query: 386 DLSQIYA-GYELYLTASTSEGFGLTLMEAVGSGLPLIGFDVRYGNQTFIDDG 436 LS + G + + S E GLT + A+ G + T ID Sbjct: 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDAN 408 >5BXY-A nrPDB Length = 158 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 365 KLRRRIEEAGAQDYIRLKG----HADLSQIYAGYELYLTASTSEGFGLTLMEAVGSGLPL 420 K R+ +EAG D + + AD+S+ LYL S ++ L E + G P+ Sbjct: 62 KARKNAKEAGVADLVEFRQGDLFEADISEA-TVVTLYLLPSVNQKLRPILFEQLSPGTPV 120 Query: 421 IGFDVRYG 428 + D G Sbjct: 121 VSHDFDMG 128 >2FHK-A nrPDB Length = 296 Score = 30.5 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 8/72 (11%) Query: 397 YLTASTSEGFGLTLM-EAVGSGLPLI------GFDVRYGNQTFIDDGKNGYLLPVSSNHV 449 L + S + + + EA G G +I G D Y DG+ G + + N Sbjct: 23 VLITAASHKWAMIAVKEATGFGTSVIMCPAEAGIDCGYVPPEETPDGRPGVTIMIGHND- 81 Query: 450 EDQIIAAFVEKI 461 ED++ +++I Sbjct: 82 EDELKEQLLDRI 93 >5XGU-B nrPDB Length = 645 Score = 29.3 bits (64), Expect = 3.7, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%) Query: 77 TTVTLDQVLAQVAGQPERSEKEGKIVRYFYPQDDQFITCYLRQEDQDSV 125 T + DQVLAQ G + +E +IVR P+ Q + Y + V Sbjct: 37 TCIHGDQVLAQPLGVDRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFV 85 >3BFR-A nrPDB Length = 215 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 22/64 (34%), Gaps = 4/64 (6%) Query: 320 PYSMITASRLATEKHIDWLVAATVQAHAQLPELTLDIYGKGSEEDKLRRRIEEAGAQDYI 379 PY + L KH V A Q EL+ D+ K R+ I Q I Sbjct: 24 PYISGQINELHYTKHHQTYVNGFNTAVDQFQELS-DLLAKEPSPANARKMIA---IQQNI 79 Query: 380 RLKG 383 + G Sbjct: 80 KFHG 83 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.130 0.327 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,970,013 Number of Sequences: 36641 Number of extensions: 718970 Number of successful extensions: 2175 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 2089 Number of HSP's gapped (non-prelim): 69 length of query: 506 length of database: 10,336,785 effective HSP length: 101 effective length of query: 405 effective length of database: 6,636,044 effective search space: 2687597820 effective search space used: 2687597820 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 61 (28.1 bits)