BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q99LG4 (440 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4ABN-A nrPDB 907 0.0 1W3B-A nrPDB 37 0.012 5DSE-A nrPDB 36 0.026 6B85-J nrPDB 32 0.62 5A01-A nrPDB 31 1.1 5LVV-A nrPDB 30 1.4 5KP5-A nrPDB 30 1.6 2UY1-A nrPDB 30 2.0 2WIO-A nrPDB 30 2.1 5LK8-B nrPDB 30 2.2 1KRR-A nrPDB 30 3.0 5TFY-I nrPDB 29 3.5 4D10-A nrPDB 29 5.2 5UCD-A nrPDB 28 5.8 4G1B-A nrPDB 28 8.0 5TDG-A nrPDB 28 8.7 5TDL-A nrPDB 28 9.8 5NNP-A nrPDB 28 9.9 >4ABN-A nrPDB Length = 474 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/440 (99%), Positives = 438/440 (99%) Query: 1 MMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEV 60 MMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEV Sbjct: 35 MMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEV 94 Query: 61 LGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVA 120 LGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDV Sbjct: 95 LGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVT 154 Query: 121 SAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR 180 SAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR Sbjct: 155 SAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR 214 Query: 181 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 240 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY Sbjct: 215 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 274 Query: 241 GEALEGFSQAAALDPVWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH 300 GEALEGFSQAAALDP WPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH Sbjct: 275 GEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH 334 Query: 301 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDS 360 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDS Sbjct: 335 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDS 394 Query: 361 DGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNG 420 DGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNG Sbjct: 395 DGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNG 454 Query: 421 KPQNSSSQASATVASRPQCE 440 KPQNSSSQASATVASRPQCE Sbjct: 455 KPQNSSSQASATVASRPQCE 474 >1W3B-A nrPDB Length = 388 Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 94 KAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGALTHCKNKV-SLQNLSMVLRQ 148 +A++L+P +A+ L +KG VA A C++ AL C SL NL+ + R+ Sbjct: 262 RAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE 317 Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 21/171 (12%) Query: 87 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGALTHCKNKV-SLQNLSMV 145 EA+ KA++ +P AW+ LG V+ +G++ A F A+T N + + NL V Sbjct: 153 EAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV 212 Query: 146 LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQ 205 L++ + R V +R L+ V+ G +Y+ G + Sbjct: 213 LKEARI-----FDRAVAAYLRALSLSPNHAVVHGN--------LACVYYEQG----LIDL 255 Query: 206 ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPV 256 A+ Y +A ++ PD + N A K + S EA + ++ A L P Sbjct: 256 AIDTYRRAIELQ---PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT 303 >5DSE-A nrPDB Length = 837 Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 45 DVQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVE 104 +++ M++ + EE L + +++ L+ YS AE +L AV++ E Sbjct: 735 ELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSL-AEKILRDAVQVNSTAHE 793 Query: 105 AWNQLGEVYWKKGDVASAHTCFSGAL 130 WN LGEV +G+ A+A CF AL Sbjct: 794 VWNGLGEVLQAQGNDAAATECFLTAL 819 >6B85-J nrPDB Length = 223 Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 23/37 (62%) Query: 94 KAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGAL 130 KA++L+PE EAW +LG+V K G + A + A+ Sbjct: 174 KAIELDPEDAEAWKELGKVLEKLGRLDEAAEAYKKAI 210 >5A01-A nrPDB Length = 710 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 16/78 (20%) Query: 69 QALMLKGKALNVTPDYSP----------------EAEVLLSKAVKLEPELVEAWNQLGEV 112 +A L KAL V PD++ EA + +A++++P +A++ +G Sbjct: 25 EATRLYLKALEVFPDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMGNT 84 Query: 113 YWKKGDVASAHTCFSGAL 130 + DV+ A C++ A+ Sbjct: 85 LKELQDVSGALQCYTRAI 102 Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Query: 193 YFNTGQNPKISQQ---ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQ 249 Y N G K Q AL Y +A +++ + D H N A++HK + EA++ + Sbjct: 78 YSNMGNTLKELQDVSGALQCYTRAIQINPAFA---DAHSNLASIHKDSGNIPEAIQSYRT 134 Query: 250 AAALDPVWPE 259 A L P +P+ Sbjct: 135 ALKLKPDFPD 144 >5LVV-A nrPDB Length = 749 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 19/136 (13%) Query: 204 QQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPVWPEPQQR 263 Q AL Y +A +++ + D H N A++HK + EA+ + A L P +P+ Sbjct: 115 QGALQCYTRAIQINPAFA---DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCN 171 Query: 264 EQQLLEFLSRLTSLLESKGKTKPKKLQSM---------LGSLRPAH--LGPCGDGRYQSA 312 L+ + T E + KKL S+ L S+ P H L P G ++ Sbjct: 172 LAHCLQIVCDWTDYDE-----RMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAI 226 Query: 313 SGQKMTLELKPLSTLQ 328 + + L L ++ L Sbjct: 227 AERHGNLCLDKINVLH 242 >5KP5-A nrPDB Length = 443 Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust. Identities = 59/279 (21%), Positives = 103/279 (36%), Gaps = 53/279 (18%) Query: 191 SLYFNTGQNPKISQQALSAYAQAEKVD-RKASSNPDLHLNR---------ATLHKYEESY 240 +LYF + ++ +ALS Y A +++ RK + L ++R A YE+ Sbjct: 17 NLYFQSNAMQQVGIEALSVYGGAAQLELRKLAQARQLDISRFDNLMMKEKAVSLPYEDPV 76 Query: 241 GEALEGFSQAAALDPVWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH 300 A+ A P+ ++Q +E + + GK+ +Q LG R Sbjct: 77 SYAVN------AAKPIIDRLSDADKQRIEMVITCSESGIDFGKSMSTYIQEYLGLSRNCR 130 Query: 301 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTE--EKVPF--TFG 356 + Y +G +M + L LS PG + V+ + L E E + + +F Sbjct: 131 MFELKQACYSGTAGLQMAINL-ILSQTFPGAKA-LVIATDISRFLVAEGGEAINYDWSFA 188 Query: 357 LVDSDGPCYAVMVYNVVQSWGVLIGDS---------VAIPEPN----------------- 390 S A++V + + + +G + P P+ Sbjct: 189 EPSSGAGAVALLVSDTPHIFQIDVGCNGYYGYEVMDTCRPNPDSEAGDADLSLLSYLDCC 248 Query: 391 ---LRHHQIRHKGKDY--SFSSVRVETPLLLVVNGKPQN 424 RH+Q R +G DY SF + TP +V G +N Sbjct: 249 ENAYRHYQNRVEGVDYRESFDYLSFHTPFGGMVKGAHRN 287 >2UY1-A nrPDB Length = 493 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 15 KLQGLVDRLYCFRDSY-FETHSVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQVEAQALML 73 +++G++ R +CF DS+ F + D R + E + K QQ VL + +VE +L Sbjct: 431 QMEGILGRYHCFLDSFNFLDLKIRDNSRLLDEFMENLPKISQQ-NNVLSNLRVEKVISLL 489 Query: 74 K 74 K Sbjct: 490 K 490 >2WIO-A nrPDB Length = 431 Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 123 HTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRH 160 H C L +N+V+L+ + +L D DE RH Sbjct: 371 HFCLGAPLARLENRVALEEIIARFGRLTVDRDDERLRH 408 >5LK8-B nrPDB Length = 261 Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%) Query: 51 EKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQL 109 E+T+Q VLG +E+Q + K +YSP + L S V E P L + W Sbjct: 9 ERTVQTSNVVLGETNIESQDIASK--------EYSPTWDRLASSEVSDEYPMLTDRWLFW 60 Query: 110 GEVYWKKGDVA 120 V W+ D A Sbjct: 61 KSVKWEVNDSA 71 >1KRR-A nrPDB Length = 203 Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 9/49 (18%) Query: 365 YAVMVYNVVQSWGVLIGDSVAIPEPNLR--------HHQIRHKGKDYSF 405 YA +V + V IGD+V I PN+ HH++R G+ YSF Sbjct: 83 YANFNLTIVDDYTVTIGDNVLI-APNVTLSVTGHPVHHELRKNGEMYSF 130 >5TFY-I nrPDB Length = 164 Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust. Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 26/116 (22%) Query: 240 YGEALEGFSQAAALDPVWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPA 299 YG +G S A L P+ E Q L++++ L TK K + L S+ P Sbjct: 57 YGSYSKGGSGLAQLYFYVKVPEGGETQDLKYVTYL--------WTKENKAVTTLTSITPT 108 Query: 300 H--LGPCGDGR--------YQSASGQKMTLELKPLS--------TLQPGVNSGTVV 337 + L P + Y+ +GQK LE+KP + TL G N G ++ Sbjct: 109 NQQLNPGARVKVTITAPTGYKPIAGQKFVLEIKPKTGASTIVTRTLSDGYNGGVII 164 >4D10-A nrPDB Length = 480 Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 107 NQLGEVYWKKGDVASAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVR 166 + LG+ Y GD+++A C+S A +C + + N M L ++ ++ HV+ V Sbjct: 155 DDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVIN--MCLNVIKVSVYLQNWSHVLSYVS 212 Query: 167 QAK 169 +A+ Sbjct: 213 KAE 215 >5UCD-A nrPDB Length = 457 Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust. Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 6 EEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQ 65 +++ KH+ +D L+ + +YF T + D G ++Q + E +++ + +E L SA Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSL-ERLKEAVINNKEALYSAL 74 Query: 66 VE 67 E Sbjct: 75 AE 76 >4G1B-A nrPDB Length = 399 Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 9/52 (17%) Query: 74 KGKALNVTPDYSPEAEVLLSKAVK------LEPELVEAWNQLGEVYWKKGDV 119 K +AL + P++ P L KA+K PE++ AW GE Y D+ Sbjct: 84 KHRALQIKPEHYPIVGEYLLKAIKEVLGDAATPEIINAW---GEAYQAIADI 132 >5TDG-A nrPDB Length = 519 Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 2/80 (2%) Query: 116 KGDVASAHTCFSGALTHC--KNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ 173 K D++S+ GA+ C K K + N + + + ++ D S +D+V Sbjct: 374 KTDISSSVITSIGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYY 433 Query: 174 MDVLDGRSWYILGNAYLSLY 193 ++ L+G++ YI G ++ Y Sbjct: 434 VNKLEGKALYIKGEPIINYY 453 >5TDL-A nrPDB Length = 531 Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust. Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Query: 111 EVYWKKGDVASAHTCFSGALTHC--KNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQA 168 ++ K D++S+ GA+ C K K + N + + + ++ D S +D+V Sbjct: 357 KIMTSKTDISSSVITSIGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVG 416 Query: 169 KLAVQMDVLDGRSWYILGNAYLSLY 193 ++ L+G++ YI G ++ Y Sbjct: 417 NTLYYVNKLEGKALYIKGEPIINYY 441 >5NNP-A nrPDB Length = 745 Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 189 YLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248 YL+ ++N + +++ AL +A ++D K N D H+ +A + K++ +A E Sbjct: 377 YLAQHYNYYMSRDLTR-ALEYVEKAIELDPK---NVDFHMTKARIFKHQGDLAKAAETMD 432 Query: 249 QAAALDP 255 A +LDP Sbjct: 433 YARSLDP 439 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4ABN-A nrPDB 891 0.0 Sequences not found previously or not previously below threshold: 5DSE-A nrPDB 38 0.008 1W3B-A nrPDB 38 0.008 6B85-J nrPDB 35 0.090 5LK8-B nrPDB 33 0.34 5LVV-A nrPDB 32 0.38 5A01-A nrPDB 32 0.43 2UY1-A nrPDB 32 0.44 5KP5-A nrPDB 32 0.71 5TFY-I nrPDB 32 0.81 1KRR-A nrPDB 31 0.93 5NNP-A nrPDB 31 1.2 5UCD-A nrPDB 30 2.2 3LUF-A nrPDB 28 6.6 4D10-A nrPDB 28 8.8 CONVERGED! >4ABN-A nrPDB Length = 474 Score = 891 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 438/440 (99%), Positives = 438/440 (99%) Query: 1 MMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEV 60 MMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEV Sbjct: 35 MMADEEEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEV 94 Query: 61 LGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVA 120 LGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDV Sbjct: 95 LGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVT 154 Query: 121 SAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR 180 SAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR Sbjct: 155 SAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR 214 Query: 181 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 240 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY Sbjct: 215 SWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESY 274 Query: 241 GEALEGFSQAAALDPVWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH 300 GEALEGFSQAAALDP WPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH Sbjct: 275 GEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH 334 Query: 301 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDS 360 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDS Sbjct: 335 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTEEKVPFTFGLVDS 394 Query: 361 DGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNG 420 DGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNG Sbjct: 395 DGPCYAVMVYNVVQSWGVLIGDSVAIPEPNLRHHQIRHKGKDYSFSSVRVETPLLLVVNG 454 Query: 421 KPQNSSSQASATVASRPQCE 440 KPQNSSSQASATVASRPQCE Sbjct: 455 KPQNSSSQASATVASRPQCE 474 >5DSE-A nrPDB Length = 837 Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Query: 45 DVQEEMEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVE 104 +++ M++ + EE L + +++ L+ YS AE +L AV++ E Sbjct: 735 ELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSL-AEKILRDAVQVNSTAHE 793 Query: 105 AWNQLGEVYWKKGDVASAHTCFSGAL 130 WN LGEV +G+ A+A CF AL Sbjct: 794 VWNGLGEVLQAQGNDAAATECFLTAL 819 >1W3B-A nrPDB Length = 388 Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 17/106 (16%) Query: 60 VLGSAQVEAQALMLKGKALNVTPD-----------YSPEAEVLLS-----KAVKLEPELV 103 VL A++ +A+ +AL+++P+ Y + + L+ +A++L+P Sbjct: 212 VLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFP 271 Query: 104 EAWNQLGEVYWKKGDVASAHTCFSGALTHCKNKV-SLQNLSMVLRQ 148 +A+ L +KG VA A C++ AL C SL NL+ + R+ Sbjct: 272 DAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE 317 Score = 34.6 bits (78), Expect = 0.086, Method: Composition-based stats. Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 27/195 (13%) Query: 87 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGALTHCKNKV-SLQNLSMV 145 EA+ KA++ +P AW+ LG V+ +G++ A F A+T N + + NL V Sbjct: 153 EAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNV 212 Query: 146 LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQ 205 L++ + R V +R L+ V+ G +Y+ G + Sbjct: 213 LKEARI-----FDRAVAAYLRALSLSPNHAVVHGN--------LACVYYEQG----LIDL 255 Query: 206 ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPVWPEPQ---- 261 A+ Y +A ++ PD + N A K + S EA + ++ A L P + Sbjct: 256 AIDTYRRAIELQ---PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLA 312 Query: 262 --QREQQLLEFLSRL 274 +REQ +E RL Sbjct: 313 NIKREQGNIEEAVRL 327 Score = 29.2 bits (64), Expect = 3.7, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 21/36 (58%) Query: 95 AVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGAL 130 A+K P L EA++ LG VY ++G + A + AL Sbjct: 59 AIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHAL 94 >6B85-J nrPDB Length = 223 Score = 34.6 bits (78), Expect = 0.090, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 25/44 (56%) Query: 87 EAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGAL 130 EA KA++L+PE EAW +LG+V K G + A + A+ Sbjct: 167 EAAEAYKKAIELDPEDAEAWKELGKVLEKLGRLDEAAEAYKKAI 210 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 67 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVASAHTCF 126 +A A +L G L AE KA++L+P AW +LG+V K G + A + Sbjct: 114 DALAWLLLGSVLEKLKRLDEAAEAY-KKAIELKPNDASAWKELGKVLEKLGRLDEAAEAY 172 Query: 127 SGAL 130 A+ Sbjct: 173 KKAI 176 Score = 28.9 bits (63), Expect = 4.8, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 12/95 (12%) Query: 94 KAVKLEPELVEAWNQLGEVYWKKGDVASAHTCFSGALTHCKNKVSL-QNLSMVLRQLQTD 152 KA++L+P AW LG V K + A + A+ N S + L VL +L Sbjct: 106 KAIELDPNDALAWLLLGSVLEKLKRLDEAAEAYKKAIELKPNDASAWKELGKVLEKLGR- 164 Query: 153 SGDEHSRHVMDSVRQA-KLAVQMDVLDGRSWYILG 186 +D +A K A+++D D +W LG Sbjct: 165 ---------LDEAAEAYKKAIELDPEDAEAWKELG 190 >5LK8-B nrPDB Length = 261 Score = 32.7 bits (73), Expect = 0.34, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%) Query: 51 EKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQL 109 E+T+Q VLG +E+Q + K +YSP + L S V E P L + W Sbjct: 9 ERTVQTSNVVLGETNIESQDIASK--------EYSPTWDRLASSEVSDEYPMLTDRWLFW 60 Query: 110 GEVYWKKGDVA 120 V W+ D A Sbjct: 61 KSVKWEVNDSA 71 >5LVV-A nrPDB Length = 749 Score = 32.3 bits (72), Expect = 0.38, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 28/184 (15%) Query: 162 MDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQ---ALSAYAQAEKVDR 218 + SV Q + +Q ++ + + + Y N G K Q AL Y +A ++ Sbjct: 70 LASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI-- 127 Query: 219 KASSNP---DLHLNRATLHKYEESYGEALEGFSQAAALDPVWPEPQQREQQLLEFLSRLT 275 NP D H N A++HK + EA+ + A L P +P+ L+ + T Sbjct: 128 ----NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 183 Query: 276 SLLESKGKTKPKKLQSM---------LGSLRPAH--LGPCGDGRYQSASGQKMTLELKPL 324 E + KKL S+ L S+ P H L P G ++ + + L L + Sbjct: 184 DYDE-----RMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHGFRKAIAERHGNLCLDKI 238 Query: 325 STLQ 328 + L Sbjct: 239 NVLH 242 >5A01-A nrPDB Length = 710 Score = 32.3 bits (72), Expect = 0.43, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 18/80 (22%) Query: 67 EAQALMLKGKALNVTPDYSP----------------EAEVLLSKAVKLEPELVEAWNQLG 110 EA L LK AL V PD++ EA + +A++++P +A++ +G Sbjct: 25 EATRLYLK--ALEVFPDFAAAHSNLASVLQQQGKLKEALMHYKEAIRIQPTFADAYSNMG 82 Query: 111 EVYWKKGDVASAHTCFSGAL 130 + DV+ A C++ A+ Sbjct: 83 NTLKELQDVSGALQCYTRAI 102 Score = 31.9 bits (71), Expect = 0.49, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Query: 193 YFNTGQNPKISQQ---ALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQ 249 Y N G K Q AL Y +A +++ + D H N A++HK + EA++ + Sbjct: 78 YSNMGNTLKELQDVSGALQCYTRAIQIN---PAFADAHSNLASIHKDSGNIPEAIQSYRT 134 Query: 250 AAALDPVWPE 259 A L P +P+ Sbjct: 135 ALKLKPDFPD 144 >2UY1-A nrPDB Length = 493 Score = 32.3 bits (72), Expect = 0.44, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 15 KLQGLVDRLYCFRDSY-FETHSVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQVEAQALML 73 +++G++ R +CF DS+ F + D R + E + K QQ VL + +VE +L Sbjct: 431 QMEGILGRYHCFLDSFNFLDLKIRDNSRLLDEFMENLPKISQQ-NNVLSNLRVEKVISLL 489 Query: 74 K 74 K Sbjct: 490 K 490 >5KP5-A nrPDB Length = 443 Score = 31.5 bits (70), Expect = 0.71, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 103/279 (36%), Gaps = 53/279 (18%) Query: 191 SLYFNTGQNPKISQQALSAYAQAEKVD-RKASSNPDLHLNR---------ATLHKYEESY 240 +LYF + ++ +ALS Y A +++ RK + L ++R A YE+ Sbjct: 17 NLYFQSNAMQQVGIEALSVYGGAAQLELRKLAQARQLDISRFDNLMMKEKAVSLPYEDPV 76 Query: 241 GEALEGFSQAAALDPVWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPAH 300 A+ A P+ ++Q +E + + GK+ +Q LG R Sbjct: 77 SYAVN------AAKPIIDRLSDADKQRIEMVITCSESGIDFGKSMSTYIQEYLGLSRNCR 130 Query: 301 LGPCGDGRYQSASGQKMTLELKPLSTLQPGVNSGTVVLGKVVFSLTTE--EKVPF--TFG 356 + Y +G +M + L LS PG + V+ + L E E + + +F Sbjct: 131 MFELKQACYSGTAGLQMAINLI-LSQTFPGAKA-LVIATDISRFLVAEGGEAINYDWSFA 188 Query: 357 LVDSDGPCYAVMVYNVVQSWGVLIGDS---------VAIPEPN----------------- 390 S A++V + + + +G + P P+ Sbjct: 189 EPSSGAGAVALLVSDTPHIFQIDVGCNGYYGYEVMDTCRPNPDSEAGDADLSLLSYLDCC 248 Query: 391 ---LRHHQIRHKGKDY--SFSSVRVETPLLLVVNGKPQN 424 RH+Q R +G DY SF + TP +V G +N Sbjct: 249 ENAYRHYQNRVEGVDYRESFDYLSFHTPFGGMVKGAHRN 287 >5TFY-I nrPDB Length = 164 Score = 31.5 bits (70), Expect = 0.81, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 26/116 (22%) Query: 240 YGEALEGFSQAAALDPVWPEPQQREQQLLEFLSRLTSLLESKGKTKPKKLQSMLGSLRPA 299 YG +G S A L P+ E Q L++++ L TK K + L S+ P Sbjct: 57 YGSYSKGGSGLAQLYFYVKVPEGGETQDLKYVTYLW--------TKENKAVTTLTSITPT 108 Query: 300 H--LGPCGDGR--------YQSASGQKMTLELKPLS--------TLQPGVNSGTVV 337 + L P + Y+ +GQK LE+KP + TL G N G ++ Sbjct: 109 NQQLNPGARVKVTITAPTGYKPIAGQKFVLEIKPKTGASTIVTRTLSDGYNGGVII 164 >1KRR-A nrPDB Length = 203 Score = 31.2 bits (69), Expect = 0.93, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 9/49 (18%) Query: 365 YAVMVYNVVQSWGVLIGDSVAIPEPNLR--------HHQIRHKGKDYSF 405 YA +V + V IGD+V I PN+ HH++R G+ YSF Sbjct: 83 YANFNLTIVDDYTVTIGDNVLIA-PNVTLSVTGHPVHHELRKNGEMYSF 130 >5NNP-A nrPDB Length = 745 Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Query: 189 YLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFS 248 YL+ ++N + +++ AL +A ++D K N D H+ +A + K++ +A E Sbjct: 377 YLAQHYNYYMSRDLTR-ALEYVEKAIELDPK---NVDFHMTKARIFKHQGDLAKAAETMD 432 Query: 249 QAAALDP 255 A +LDP Sbjct: 433 YARSLDP 439 >5UCD-A nrPDB Length = 457 Score = 30.0 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 6 EEEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQ 65 +++ KH+ +D L+ + +YF T + D G ++Q + E +++ + +E L SA Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSL-ERLKEAVINNKEALYSAL 74 Query: 66 VE 67 E Sbjct: 75 AE 76 >3LUF-A nrPDB Length = 259 Score = 28.5 bits (62), Expect = 6.6, Method: Composition-based stats. Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Query: 7 EEAKHVLQKLQGLVDRLYCFRDSYFETHSVEDAGRKQQDVQEEMEKTLQQMEEVLGSAQV 66 ++++H LQ GLV RLY + E V+D+ + ++ K L Q+ E S Sbjct: 103 KDSRHSLQYAVGLVHRLYL--NQQIEVLVVDDSRTSRHRTMAQLRKQLLQVHE--ASHAR 158 Query: 67 EAQALMLKGKALN--VTPDYSPEAE 89 EA A + + A+ + Y PE + Sbjct: 159 EALATLEQHPAIRLVLVDYYMPEID 183 >4D10-A nrPDB Length = 480 Score = 28.1 bits (61), Expect = 8.8, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 107 NQLGEVYWKKGDVASAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVR 166 + LG+ Y GD+++A C+S A +C + + N M L ++ ++ HV+ V Sbjct: 155 DDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVIN--MCLNVIKVSVYLQNWSHVLSYVS 212 Query: 167 QAK 169 +A+ Sbjct: 213 KAE 215 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.136 0.409 Lambda K H 0.267 0.0400 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,565,869 Number of Sequences: 36641 Number of extensions: 644660 Number of successful extensions: 1427 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 32 Number of HSP's that attempted gapping in prelim test: 1395 Number of HSP's gapped (non-prelim): 62 length of query: 440 length of database: 10,336,785 effective HSP length: 100 effective length of query: 340 effective length of database: 6,672,685 effective search space: 2268712900 effective search space used: 2268712900 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 61 (28.1 bits)