BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q99J99 (297 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5WQK-A nrPDB 596 e-171 4JGT-A nrPDB 507 e-144 1BOH-A nrPDB 371 e-103 1URH-A nrPDB 205 2e-53 3UTN-X nrPDB 157 7e-39 1UAR-A nrPDB 105 3e-23 3AAX-A nrPDB 104 4e-23 1OKG-A nrPDB 86 2e-17 3HZU-A nrPDB 86 2e-17 3P3A-A nrPDB 84 7e-17 1H4M-X nrPDB 79 2e-15 2WLX-A nrPDB 78 5e-15 2EG4-A nrPDB 40 0.001 6BEV-A nrPDB 36 0.017 1YT8-A nrPDB 36 0.023 3D1P-A nrPDB 35 0.044 2O4V-A nrPDB 34 0.073 4XZ1-A nrPDB 29 2.1 5CZX-A nrPDB 28 3.6 2ZFH-A nrPDB 28 4.2 1XK8-A nrPDB 28 6.4 6CGM-A nrPDB 27 8.8 >5WQK-A nrPDB Length = 293 Score = 596 bits (1537), Expect = e-171, Method: Compositional matrix adjust. Identities = 289/293 (98%), Positives = 289/293 (98%) Query: 5 QLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR 64 QLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR Sbjct: 1 QLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR 60 Query: 65 CSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHS 124 SDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYD SDQGLYSAPRVWWMFRAFGHHS Sbjct: 61 SSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHS 120 Query: 125 VSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDAR 184 VSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDAR Sbjct: 121 VSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDAR 180 Query: 185 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL 244 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL Sbjct: 181 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL 240 Query: 245 VATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHIISEGRGKTQ 297 VATCGSGVTA HVVLGAFL GKSDVPVYDGSWVEWYMRAQPEHIISEGRGKTQ Sbjct: 241 VATCGSGVTASHVVLGAFLSGKSDVPVYDGSWVEWYMRAQPEHIISEGRGKTQ 293 >4JGT-A nrPDB Length = 299 Score = 507 bits (1305), Expect = e-144, Method: Compositional matrix adjust. Identities = 236/279 (84%), Positives = 259/279 (92%) Query: 11 VSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHTS 70 VSAQWVAEAL+APR+ QPL+LLDASWYLPKLGRDARREFEERHIPGAAFFDID+CSD TS Sbjct: 21 VSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTS 80 Query: 71 PYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDG 130 PYDHMLP A HFA+YAG LGV AATHVVIYD SDQGLYSAPRVWWMFRAFGHH+VSLLDG Sbjct: 81 PYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDG 140 Query: 131 GFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQ 190 G RHWL QNLP+SSGKS PAEF AQLDP+FIKT+EDI ENL++RRFQVVD+RA GRF+ Sbjct: 141 GLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFR 200 Query: 191 GTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGS 250 GT+PEPRDGIEPGHIPG+VNIPFT+FL+ EGLEKSPEEI+ LF+EKKVDLSKPLVATCGS Sbjct: 201 GTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGS 260 Query: 251 GVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHII 289 GVTACHV LGA+LCGK DVP+YDGSWVEWYMRA+PE +I Sbjct: 261 GVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDVI 299 >1BOH-A nrPDB Length = 296 Score = 371 bits (952), Expect = e-103, Method: Compositional matrix adjust. Identities = 170/290 (58%), Positives = 224/290 (77%), Gaps = 2/290 (0%) Query: 6 LFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRC 65 L+RALVS +W+AE+++A + L++LDASWY P R+AR+E+ ERH+PGA+FFDI+ C Sbjct: 5 LYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGT-REARKEYLERHVPGASFFDIEEC 63 Query: 66 SDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSV 125 D SPY+ MLP+ FADY GSLG+S THVV+YD D G + APRVWWMFR FGH +V Sbjct: 64 RDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTV 123 Query: 126 SLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARA 185 S+L+GGFR+WL + P++S S EPA F A L+ S +KT+E +LENL+++RFQ+VD+RA Sbjct: 124 SVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRA 183 Query: 186 AGRFQGTQPEPRD-GIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL 244 GR+ GTQPEP G++ GHI GSVN+PF FLT +G EKSPEE++ +F+ KKVDL+KPL Sbjct: 184 QGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPL 243 Query: 245 VATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHIISEGRG 294 +ATC GVTACH+ L A+LCGK DV +YDGSW EW+ RA PE +S+G+G Sbjct: 244 IATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG 293 >1URH-A nrPDB Length = 280 Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 110/275 (40%), Positives = 154/275 (56%), Gaps = 8/275 (2%) Query: 10 LVSAQWVAEALKAPRSSQPLKLLDASWYLP-KLGRDARREFEERHIPGAAFFDIDRCSDH 68 V A W+AE + P ++++DA P + R+ +E+ HIPGA FFDI+ SDH Sbjct: 5 FVGADWLAEHIDDPE----IQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDH 60 Query: 69 TSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLL 128 TSP HMLP FA LGV+ H+++YD+ + L+SAPR WWM R FG VS+L Sbjct: 61 TSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGN--LFSAPRAWWMLRTFGVEKVSIL 118 Query: 129 DGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGR 188 GG W +L + G EF+A +P + D+L Q++DAR A R Sbjct: 119 GGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAAR 178 Query: 189 FQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATC 248 F EPR G+ GHIPG++N+P+TE L EG K+ +E+ +F + V KP++ +C Sbjct: 179 FNAEVDEPRPGLRRGHIPGALNVPWTE-LVREGELKTTDELDAIFFGRGVSYDKPIIVSC 237 Query: 249 GSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRA 283 GSGVTA V+L +V +YDG+W EW RA Sbjct: 238 GSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARA 272 >3UTN-X nrPDB Length = 327 Score = 157 bits (396), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 152/311 (48%), Gaps = 40/311 (12%) Query: 1 MAAPQLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEER-HIPGAAF 59 + +P+ F LV+++ V + +DA+WYLP D + +F + IP + F Sbjct: 29 LISPKAFVKLVASEKVHRIVP----------VDATWYLPSWKLDNKVDFLTKPRIPNSIF 78 Query: 60 FDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRA 119 FDID SD SPY HM P F D +LGV +V+YD G +S+PR W Sbjct: 79 FDIDAISDKKSPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRV--GNFSSPRCAWTLGV 136 Query: 120 FGHHSVSLLDGGFRHWLNQNLPISSGK---------SHSEPAEFSAQLDPSFIKTHEDIL 170 GH V LL+ F + P+ S K SH E +E I +E++ Sbjct: 137 MGHPKVYLLNN-FNQYREFKYPLDSSKVAAFSPYPKSHYESSE---SFQDKEIVDYEEMF 192 Query: 171 ENLD----ARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFL--------- 217 + + A++F DAR+ GRF+GT+PEPR I GHIPG+ +P+ L Sbjct: 193 QLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPE 252 Query: 218 TNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWV 277 E + + E+ + F +D SKP + +CG+GV+ + L G +V +YDGSW Sbjct: 253 AGEAIHATLEKALKDF-HCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWT 311 Query: 278 EWYMRAQPEHI 288 EW +++ PE I Sbjct: 312 EWVLKSGPEWI 322 >1UAR-A nrPDB Length = 285 Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 26/281 (9%) Query: 9 ALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDH 68 LVS WV E L+ P+ +++L+ + ++ HIPGA D R D Sbjct: 8 VLVSTDWVQEHLEDPK----VRVLEVD--------EDILLYDTGHIPGAQKIDWQR--DF 53 Query: 69 TSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLL 128 P + FA LG+S T VV+Y D + + A +W F+ GH V L+ Sbjct: 54 WDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNN--WWAAYAFWFFKYNGHKDVRLM 111 Query: 129 DGGFRHWLNQNLPISSGKSHSEPAEFSAQL-DPSFIKTHEDILENL---DARRFQVVDAR 184 +GG + W+ + P+++ P + D S +D+LE++ + +VD R Sbjct: 112 NGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVR 171 Query: 185 AAGRFQGT---QPE-PRDG-IEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVD 239 + ++G P+ P++G + GHIPG+ NIP+ + + +G KS EE++ L++ + Sbjct: 172 SPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGIT 231 Query: 240 LSKPLVATCGSGVTACHV-VLGAFLCGKSDVPVYDGSWVEW 279 K +V C + H + +L G V YDGSW EW Sbjct: 232 KDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEW 272 >3AAX-A nrPDB Length = 277 Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 79/278 (28%), Positives = 123/278 (44%), Gaps = 27/278 (9%) Query: 10 LVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69 LVSA W L AP+ D S Y + HI GA +D +D Sbjct: 7 LVSADWAESNLHAPKVVFVEVDEDTSAY------------DRDHIAGA--IKLDWRTDLQ 52 Query: 70 SPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLD 129 P +A F+ G++ V++Y ++ + A +W F+ +GH V LLD Sbjct: 53 DPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNN--WFAAYAYWYFKLYGHEKVKLLD 110 Query: 130 GGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHED-ILENLDARRFQVVDARAAGR 188 GG + W P+SS ++A + I+ D +L ++ + ++D R+ Sbjct: 111 GGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVK--NLIDVRSPDE 168 Query: 189 FQGTQPEP-----RDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKP 243 F G P PGHIPG++N+P++ +G KS EE+ +L+ + +D SK Sbjct: 169 FSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKE 228 Query: 244 LVATCGSGVTACHV--VLGAFLCGKSDVPVYDGSWVEW 279 +A C G + H VL L G +V YDGSW E+ Sbjct: 229 TIAYCRIGERSSHTWFVLRELL-GHQNVKNYDGSWTEY 265 >1OKG-A nrPDB Length = 373 Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 22/264 (8%) Query: 30 KLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDH---TSPYDHMLPNATHFADYA 86 +++D + L K+ ++ + H+ A D+D TS H LP F D+ Sbjct: 29 RIVDCRYSL-KIKDHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPCAEFIDWC 87 Query: 87 GSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSGK 146 + G++ V+ YDD + G R+WWM + G + +++GGF+ L + SG+ Sbjct: 88 MANGMAGELPVLCYDD-ECGAMGGCRLWWMLNSLGADAY-VINGGFQACKAAGLEMESGE 145 Query: 147 SHSEPAEFSA-QLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGT-QPEPRDGIEPGH 204 S P + +F H +++ + + + DAR+A RF T +P D + PGH Sbjct: 146 PSSLPRPATHWPFKTAF--QHHYLVDEIPPQAI-ITDARSADRFASTVRPYAADKM-PGH 201 Query: 205 IPGSVNIPFTEFLTNEG---LEKSPEEIKRLFKE------KKVDLSKPLVATCGSGVTAC 255 I G+ N+P+T L G + +S EEI+ DLS V +CGSGVTAC Sbjct: 202 IEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSS-FVFSCGSGVTAC 260 Query: 256 HVVLGAFLCGKSDVPVYDGSWVEW 279 + G +Y GSW E+ Sbjct: 261 INIALVHHLGLGHPYLYCGSWSEY 284 >3HZU-A nrPDB Length = 318 Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/286 (28%), Positives = 125/286 (43%), Gaps = 44/286 (15%) Query: 10 LVSAQWVAEALKAP-----RSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR 64 LV+A W++ + AP S + + L D HIPGA ID Sbjct: 41 LVTADWLSAHMGAPGLAIVESDEDVLLYDVG-----------------HIPGA--VKIDW 81 Query: 65 CSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHS 124 +D P N FA+ G++ VVIY D+ + A W+F FGH Sbjct: 82 HTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVIY--GDKSNWWAAYALWVFTLFGHAD 139 Query: 125 VSLLDGGFRHWLNQ----NLPISSGKSHSEPAEFSAQLDPSFIKT-HEDILENLDARRFQ 179 V LL+GG WL + L + + P Q + + I+ +D+L L A+ Sbjct: 140 VRLLNGGRDLWLAERRETTLDVPTKTCTGYPV---VQRNDAPIRAFRDDVLAILGAQ--P 194 Query: 180 VVDARAAGRFQGTQPE----PRDG-IEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFK 234 ++D R+ + G + P +G + GHIP +V+IP+ + G +S EE++RL+ Sbjct: 195 LIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYD 254 Query: 235 EKKVDLSKPLVATCGSGVTACHV-VLGAFLCGKSDVPVYDGSWVEW 279 ++ V C G + H + L GK+DV YDGSW EW Sbjct: 255 --FINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEW 298 >3P3A-A nrPDB Length = 320 Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 29/273 (10%) Query: 26 SQPLKLLDASWYLPKLGR---------DARREFEERHIPGAAFFDIDRCSDHTSPYDHML 76 + P +L+ A W LGR + ++ HIPGA ID +D P Sbjct: 37 AHPERLVTADWLASNLGRPGLVIVESDEDVLLYDTGHIPGAV--KIDWHTDLNDPAVRDY 94 Query: 77 PNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRHWL 136 N FA GV+ VVIY D + A W+F FGH V LLDGG W+ Sbjct: 95 INGEQFAALMDRKGVTRDDTVVIYGDKSN--WWAAYAMWVFHLFGHPDVRLLDGGRDLWV 152 Query: 137 ----NQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGT 192 + L + + ++ P + D +D+L L + ++D R+ + G Sbjct: 153 STGRDTTLEVPTRQTSGYPV--VERNDAPIRAFKDDVLRVLG--KEPLIDVRSPQEYTGE 208 Query: 193 QPE----PRDG-IEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVAT 247 + P +G + GHIP +V++P+++ ++G ++ E++ ++ K D KP+V Sbjct: 209 RTHMPDYPEEGALRGGHIPTAVSVPWSKAAYDDGRFRARAELEEIYGFVKPD-DKPIV-Y 266 Query: 248 CGSGVTACHV-VLGAFLCGKSDVPVYDGSWVEW 279 C G + H + +L G +V YDGSW EW Sbjct: 267 CRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEW 299 >1H4M-X nrPDB Length = 271 Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 5/231 (2%) Query: 49 FEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLY 108 + E HIPGA F D R P + P G LG V+YDD G Sbjct: 36 YAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGW- 94 Query: 109 SAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHED 168 A R W+ G L+GG WL ++ P+S + L + + Sbjct: 95 -AGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELPAPAGGPVALSLHDEPTASRDY 153 Query: 169 ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEE 228 +L L A + DAR+ ++G + G GHIPG+VN +T + + + Sbjct: 154 LLGRLGAADLAIWDARSPQEYRGEKVLAAKG---GHIPGAVNFEWTAAMDPSRALRIRTD 210 Query: 229 IKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEW 279 I +E + K +V C + + L A G V Y GSW EW Sbjct: 211 IAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEW 261 >2WLX-A nrPDB Length = 423 Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 34/303 (11%) Query: 7 FRALVSAQWVAEALKAPR-SSQP---LKLLDASWYLPKLGRDARREFEERHIPGAAFFDI 62 F LV QW+ + + +++P K+++A+W PKL + HIPGA + D Sbjct: 122 FEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKL-------YLISHIPGADYIDT 174 Query: 63 DRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGH 122 + + P + + + A A G+ T V++Y + +Y+A RV + G Sbjct: 175 NEV--ESEPLWNKVSDEQLKAMLAKH-GIRHDTTVILYG---RDVYAAARVAQIMLYAGV 228 Query: 123 HSVSLLDGGFRHWLNQNLPISSG---KSHSEPAEFSAQL--DPSFIKTHEDILENLDARR 177 V LLDGG++ W + LP+ G K +EP +F ++ P + E L + Sbjct: 229 KDVRLLDGGWQTWSDAGLPVERGTPPKVKAEP-DFGVKIPAQPQLMLDMEQARGLLHRQD 287 Query: 178 FQVVDARAAGRFQGTQP-----EPRD---GIEPGHIPGSVNIPFTEFLTNEGLEKSPEEI 229 +V R+ F GT +P+ G GH GS + +F +G +S ++I Sbjct: 288 ASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHMEDFHNPDGTMRSADDI 346 Query: 230 KRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHII 289 ++K + + + CG+G A + A G +V VYDG W EW + P++ + Sbjct: 347 TAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEW--SSDPKNPV 404 Query: 290 SEG 292 + G Sbjct: 405 ATG 407 >2EG4-A nrPDB Length = 230 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 71/179 (39%), Gaps = 20/179 (11%) Query: 46 RREFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQ 105 R +E H+PGA D+ + + +LG+ + VV+YD+ Sbjct: 15 RPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRSP--VVLYDE--- 69 Query: 106 GLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKSHSEP--AEFSAQLDPSFI 163 GL S F G V L W P ++ K +P E A+L ++ Sbjct: 70 GLTSRLCRTAFFLGLGGLEVQL-------WTEGWEPYATEKEEPKPERTEVVAKLRRDWL 122 Query: 164 KTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGL 222 T ++ AR ++D R+ FQG + P G IPGS N P FL+ EGL Sbjct: 123 LTADEA-----ARHPLLLDVRSPEEFQG-KVHPPCCPRGGRIPGSKNAPLELFLSPEGL 175 >6BEV-A nrPDB Length = 135 Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Query: 185 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLS-KP 243 A+GR + R+ G IPG++NIP +E L+ P + L+ +K L + Sbjct: 37 ASGRARLFDVRSREEAAAGTIPGALNIPVSEL--ESALQMEPAAFQALYSAEKPKLEDEH 94 Query: 244 LVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEW 279 LV C G A G + Y G++ EW Sbjct: 95 LVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 130 >1YT8-A nrPDB Length = 539 Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 29/132 (21%) Query: 95 THVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQ--------NLPISSGK 146 T + +YDD +GL AP G+ V+LLDGG W N N+P K Sbjct: 64 TPITVYDDG-EGL--APVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVP---SK 117 Query: 147 SHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVV-DARAAGRFQGTQPEPRDGIEPGHI 205 + E E + + PS E++ LDAR V+ DAR RF D + I Sbjct: 118 AFGELVE-AERHTPSL--AAEEVQALLDARAEAVILDAR---RF--------DEYQTMSI 163 Query: 206 PGSVNIPFTEFL 217 PG +++P E + Sbjct: 164 PGGISVPGAELV 175 >3D1P-A nrPDB Length = 139 Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 204 HIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFL 263 HIP S+N+P+ L+ P E ++ K D +K L+ C SG A Sbjct: 56 HIPASINVPYRSHPDAFALD--PLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASS 113 Query: 264 CGKSDVPVYDGSWVEW 279 G S+ +Y GS +W Sbjct: 114 HGYSNTSLYPGSMNDW 129 >2O4V-A nrPDB Length = 411 Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Query: 209 VNIPFTEFLTNEGLEK--SPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLG-AFLCG 265 VN+ F F T+ GLEK S + + L + D++ + G+G+ A VV G AFL G Sbjct: 106 VNLKFGRFYTDFGLEKATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSG 165 >4XZ1-A nrPDB Length = 262 Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 9/88 (10%) Query: 74 HMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLL-DGGF 132 HM A H + GS+ + A + GL+ + R+ G + +SL+ D F Sbjct: 3 HMPDPAAHLPFFYGSISRAEAEEHLKLAGMADGLFLLRQC---LRSLGGYVLSLVHDVRF 59 Query: 133 RHW-----LNQNLPISSGKSHSEPAEFS 155 H+ LN I+ GK+H PAE Sbjct: 60 HHFPIERQLNGTYAIAGGKAHCGPAELC 87 >5CZX-A nrPDB Length = 271 Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Query: 45 ARREFEERHIPGAAFFDID-RCSDHTSPYDHMLPNATHFADYAGSL 89 ARRE I +ID R + DH P+A ADY G+L Sbjct: 192 ARRELAPEVIGSVVMLEIDNRLCLQSPENDHCFPDAQSAADYLGAL 237 >2ZFH-A nrPDB Length = 179 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Query: 192 TQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKV 238 TQP P G++PGSV+ F+T EK +EI R EK++ Sbjct: 51 TQPSPASDSGSGYVPGSVS---AAFVTCPN-EKVAKEIARAVVEKRL 93 >1XK8-A nrPDB Length = 147 Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Query: 192 TQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKV 238 TQP P G++PGSV+ F NE + K EI R EK++ Sbjct: 19 TQPSPASDSGSGYVPGSVSAAFVT-CPNEKVAK---EIARAVVEKRL 61 >6CGM-A nrPDB Length = 700 Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 28/69 (40%) Query: 32 LDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGV 91 +D S L KLG + G A D++ + +L NA +AD G Sbjct: 186 IDISMQLSKLGGGVSLNLSKLRAKGEAIKDVENATKGVVGVMKLLDNAFRYADQMGQRQG 245 Query: 92 SAATHVVIY 100 S A ++ I+ Sbjct: 246 SGAAYLNIF 254 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5WQK-A nrPDB 433 e-122 4JGT-A nrPDB 401 e-112 1BOH-A nrPDB 387 e-108 1URH-A nrPDB 312 9e-86 1UAR-A nrPDB 302 1e-82 3UTN-X nrPDB 295 1e-80 3AAX-A nrPDB 282 1e-76 3HZU-A nrPDB 268 2e-72 2WLX-A nrPDB 263 7e-71 3P3A-A nrPDB 261 3e-70 1H4M-X nrPDB 257 4e-69 1OKG-A nrPDB 237 5e-63 2EG4-A nrPDB 173 1e-43 Sequences not found previously or not previously below threshold: 3D1P-A nrPDB 67 1e-11 1YT8-A nrPDB 66 2e-11 6BEV-A nrPDB 63 2e-10 1TQ1-A nrPDB 48 5e-06 2JTQ-A nrPDB 40 0.001 1QB0-A nrPDB 38 0.006 1C25-A nrPDB 37 0.009 3NTA-A nrPDB 34 0.054 5E7P-A nrPDB 34 0.098 4WH9-A nrPDB 34 0.12 6ADQ-F nrPDB 32 0.31 5VC7-A nrPDB 32 0.37 5G4G-A nrPDB 32 0.37 6EPD-M nrPDB 32 0.45 5VFP-F nrPDB 32 0.45 3JCU-S nrPDB 30 1.2 3CSQ-A nrPDB 30 1.3 3EKG-A nrPDB 30 1.4 5VIP-A nrPDB 30 1.5 3FXG-A nrPDB 29 1.8 4IV9-A nrPDB 29 3.8 >5WQK-A nrPDB Length = 293 Score = 433 bits (1113), Expect = e-122, Method: Composition-based stats. Identities = 289/293 (98%), Positives = 289/293 (98%) Query: 5 QLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR 64 QLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR Sbjct: 1 QLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR 60 Query: 65 CSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHS 124 SDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYD SDQGLYSAPRVWWMFRAFGHHS Sbjct: 61 SSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHS 120 Query: 125 VSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDAR 184 VSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDAR Sbjct: 121 VSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDAR 180 Query: 185 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL 244 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL Sbjct: 181 AAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL 240 Query: 245 VATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHIISEGRGKTQ 297 VATCGSGVTA HVVLGAFL GKSDVPVYDGSWVEWYMRAQPEHIISEGRGKTQ Sbjct: 241 VATCGSGVTASHVVLGAFLSGKSDVPVYDGSWVEWYMRAQPEHIISEGRGKTQ 293 >4JGT-A nrPDB Length = 299 Score = 401 bits (1030), Expect = e-112, Method: Composition-based stats. Identities = 236/279 (84%), Positives = 259/279 (92%) Query: 11 VSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHTS 70 VSAQWVAEAL+APR+ QPL+LLDASWYLPKLGRDARREFEERHIPGAAFFDID+CSD TS Sbjct: 21 VSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTS 80 Query: 71 PYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDG 130 PYDHMLP A HFA+YAG LGV AATHVVIYD SDQGLYSAPRVWWMFRAFGHH+VSLLDG Sbjct: 81 PYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDG 140 Query: 131 GFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQ 190 G RHWL QNLP+SSGKS PAEF AQLDP+FIKT+EDI ENL++RRFQVVD+RA GRF+ Sbjct: 141 GLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFR 200 Query: 191 GTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGS 250 GT+PEPRDGIEPGHIPG+VNIPFT+FL+ EGLEKSPEEI+ LF+EKKVDLSKPLVATCGS Sbjct: 201 GTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGS 260 Query: 251 GVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHII 289 GVTACHV LGA+LCGK DVP+YDGSWVEWYMRA+PE +I Sbjct: 261 GVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPEDVI 299 >1BOH-A nrPDB Length = 296 Score = 387 bits (993), Expect = e-108, Method: Composition-based stats. Identities = 170/290 (58%), Positives = 224/290 (77%), Gaps = 2/290 (0%) Query: 6 LFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRC 65 L+RALVS +W+AE+++A + L++LDASWY P R+AR+E+ ERH+PGA+FFDI+ C Sbjct: 5 LYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGT-REARKEYLERHVPGASFFDIEEC 63 Query: 66 SDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSV 125 D SPY+ MLP+ FADY GSLG+S THVV+YD D G + APRVWWMFR FGH +V Sbjct: 64 RDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTV 123 Query: 126 SLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARA 185 S+L+GGFR+WL + P++S S EPA F A L+ S +KT+E +LENL+++RFQ+VD+RA Sbjct: 124 SVLNGGFRNWLKEGHPVTSEPSRPEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRA 183 Query: 186 AGRFQGTQPEPRD-GIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL 244 GR+ GTQPEP G++ GHI GSVN+PF FLT +G EKSPEE++ +F+ KKVDL+KPL Sbjct: 184 QGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPL 243 Query: 245 VATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHIISEGRG 294 +ATC GVTACH+ L A+LCGK DV +YDGSW EW+ RA PE +S+G+G Sbjct: 244 IATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQGKG 293 >1URH-A nrPDB Length = 280 Score = 312 bits (800), Expect = 9e-86, Method: Composition-based stats. Identities = 111/282 (39%), Positives = 156/282 (55%), Gaps = 9/282 (3%) Query: 10 LVSAQWVAEALKAPRSSQPLKLLDASWYLP-KLGRDARREFEERHIPGAAFFDIDRCSDH 68 V A W+AE + P ++++DA P + R+ +E+ HIPGA FFDI+ SDH Sbjct: 5 FVGADWLAEHIDDPE----IQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDH 60 Query: 69 TSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLL 128 TSP HMLP FA LGV+ H+++YD+ + L+SAPR WWM R FG VS+L Sbjct: 61 TSPLPHMLPRPETFAVAMRELGVNQDKHLIVYDEGN--LFSAPRAWWMLRTFGVEKVSIL 118 Query: 129 DGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGR 188 GG W +L + G EF+A +P + D+L Q++DAR A R Sbjct: 119 GGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAAR 178 Query: 189 FQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATC 248 F EPR G+ GHIPG++N+P+TE L EG K+ +E+ +F + V KP++ +C Sbjct: 179 FNAEVDEPRPGLRRGHIPGALNVPWTE-LVREGELKTTDELDAIFFGRGVSYDKPIIVSC 237 Query: 249 GSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQ-PEHII 289 GSGVTA V+L +V +YDG+W EW RA P + Sbjct: 238 GSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPV 279 >1UAR-A nrPDB Length = 285 Score = 302 bits (772), Expect = 1e-82, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 26/283 (9%) Query: 8 RALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSD 67 LVS WV E L+ P+ +++L+ + ++ HIPGA ID D Sbjct: 7 EVLVSTDWVQEHLEDPK----VRVLEVD--------EDILLYDTGHIPGAQ--KIDWQRD 52 Query: 68 HTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSL 127 P + FA LG+S T VV+Y D + + A +W F+ GH V L Sbjct: 53 FWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNN--WWAAYAFWFFKYNGHKDVRL 110 Query: 128 LDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTH-EDILENL---DARRFQVVDA 183 ++GG + W+ + P+++ P + I+ + +D+LE++ + +VD Sbjct: 111 MNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDV 170 Query: 184 RAAGRFQGTQPE----PRDG-IEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKV 238 R+ ++G P++G + GHIPG+ NIP+ + + +G KS EE++ L++ + Sbjct: 171 RSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGI 230 Query: 239 DLSKPLVATCGSGVTACHV-VLGAFLCGKSDVPVYDGSWVEWY 280 K +V C + H + +L G V YDGSW EW Sbjct: 231 TKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWG 273 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 203 GHIPGSVNIPFT-EFLTNE-GLEKSPEEIKRLFKEKKVDLSKPLVATC-GSGVTACHVVL 259 GHIPG+ I + +F S EE +L + + +V + A + Sbjct: 39 GHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFW 98 Query: 260 GAFLCGKSDVPVYDGSWVEWYMRAQP 285 G DV + +G +W +P Sbjct: 99 FFKYNGHKDVRLMNGGRQKWVEEGRP 124 >3UTN-X nrPDB Length = 327 Score = 295 bits (755), Expect = 1e-80, Method: Composition-based stats. Identities = 101/308 (32%), Positives = 150/308 (48%), Gaps = 34/308 (11%) Query: 1 MAAPQLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEER-HIPGAAF 59 + +P+ F LV+++ V + +DA+WYLP D + +F + IP + F Sbjct: 29 LISPKAFVKLVASEKVHRIVP----------VDATWYLPSWKLDNKVDFLTKPRIPNSIF 78 Query: 60 FDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRA 119 FDID SD SPY HM P F D +LGV +V+YD G +S+PR W Sbjct: 79 FDIDAISDKKSPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRV--GNFSSPRCAWTLGV 136 Query: 120 FGHHSVSLLDGGFRHWLNQNLPISSGKS---HSEPA---EFSAQLDPSFIKTHEDILENL 173 GH V LL+ F + P+ S K P E S I +E++ + + Sbjct: 137 MGHPKVYLLNN-FNQYREFKYPLDSSKVAAFSPYPKSHYESSESFQDKEIVDYEEMFQLV 195 Query: 174 D----ARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNE--------- 220 A++F DAR+ GRF+GT+PEPR I GHIPG+ +P+ L E Sbjct: 196 KSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGE 255 Query: 221 GLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWY 280 + + E+ + F +D SKP + +CG+GV+ + L G +V +YDGSW EW Sbjct: 256 AIHATLEKALKDF-HCTLDPSKPTICSCGTGVSGVIIKTALELAGVPNVRLYDGSWTEWV 314 Query: 281 MRAQPEHI 288 +++ PE I Sbjct: 315 LKSGPEWI 322 >3AAX-A nrPDB Length = 277 Score = 282 bits (721), Expect = 1e-76, Method: Composition-based stats. Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 25/279 (8%) Query: 9 ALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDH 68 LVSA W L AP+ D S ++ HI GA +D +D Sbjct: 6 VLVSADWAESNLHAPKVVFVEVDEDTS------------AYDRDHIAGA--IKLDWRTDL 51 Query: 69 TSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLL 128 P +A F+ G++ V++Y ++ + A +W F+ +GH V LL Sbjct: 52 QDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNN--WFAAYAYWYFKLYGHEKVKLL 109 Query: 129 DGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKT-HEDILENLDARRFQVVDARAAG 187 DGG + W P+SS ++A + I+ +++L ++ + ++D R+ Sbjct: 110 DGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVK--NLIDVRSPD 167 Query: 188 RFQGTQPEP-----RDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSK 242 F G P PGHIPG++N+P++ +G KS EE+ +L+ + +D SK Sbjct: 168 EFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSK 227 Query: 243 PLVATCGSGVTACHV-VLGAFLCGKSDVPVYDGSWVEWY 280 +A C G + H + L G +V YDGSW E+ Sbjct: 228 ETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYG 266 Score = 37.9 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 3/85 (3%) Query: 204 HIPGSVNIPF-TEFLTN-EGLEKSPEEIKRLFKEKKVDLSKPLVATCGSG-VTACHVVLG 260 HI G++ + + T+ + ++ +L E+ + ++ G+ A + Sbjct: 38 HIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWY 97 Query: 261 AFLCGKSDVPVYDGSWVEWYMRAQP 285 L G V + DG +W + +P Sbjct: 98 FKLYGHEKVKLLDGGRKKWELDGRP 122 >3HZU-A nrPDB Length = 318 Score = 268 bits (684), Expect = 2e-72, Method: Composition-based stats. Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 32/283 (11%) Query: 8 RALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSD 67 LV+A W++ + AP + + ++ HIPGA ID +D Sbjct: 39 ERLVTADWLSAHMGAPGLAIVE------------SDEDVLLYDVGHIPGA--VKIDWHTD 84 Query: 68 HTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSL 127 P N FA+ G++ VVIY D + A W+F FGH V L Sbjct: 85 LNDPRVRDYINGEQFAELMDRKGIARDDTVVIYGDKSN--WWAAYALWVFTLFGHADVRL 142 Query: 128 LDGGFRHWLNQ----NLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDA 183 L+GG WL + L + + P + D +D+L L A+ ++D Sbjct: 143 LNGGRDLWLAERRETTLDVPTKTCTGYP--VVQRNDAPIRAFRDDVLAILGAQ--PLIDV 198 Query: 184 RAAGRFQGTQPE----PRDG-IEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKV 238 R+ + G + P +G + GHIP +V+IP+ + G +S EE++RL+ + Sbjct: 199 RSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDF--I 256 Query: 239 DLSKPLVATCGSGVTACHV-VLGAFLCGKSDVPVYDGSWVEWY 280 + V C G + H + L GK+DV YDGSW EW Sbjct: 257 NPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWG 299 >2WLX-A nrPDB Length = 423 Score = 263 bits (671), Expect = 7e-71, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 32/303 (10%) Query: 7 FRALVSAQWVAEALKAPRS----SQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDI 62 F LV QW+ + + + K+++A+W PKL + HIPGA + D Sbjct: 122 FEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKL-------YLISHIPGADYIDT 174 Query: 63 DRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGH 122 + + P + + + A A G+ T V++Y + +Y+A RV + G Sbjct: 175 NEV--ESEPLWNKVSDEQLKAMLAKH-GIRHDTTVILYG---RDVYAAARVAQIMLYAGV 228 Query: 123 HSVSLLDGGFRHWLNQNLPISSGKSHSEPAE----FSAQLDPSFIKTHEDILENLDARRF 178 V LLDGG++ W + LP+ G AE P + E L + Sbjct: 229 KDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDA 288 Query: 179 QVVDARAAGRFQGTQP-----EPRD---GIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIK 230 +V R+ F GT +P+ G GH GS + +F +G +S ++I Sbjct: 289 SLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHMEDFHNPDGTMRSADDIT 347 Query: 231 RLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQPEHIIS 290 ++K + + + CG+G A + A G +V VYDG W EW + P++ ++ Sbjct: 348 AMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEW--SSDPKNPVA 405 Query: 291 EGR 293 G Sbjct: 406 TGE 408 >3P3A-A nrPDB Length = 320 Score = 261 bits (666), Expect = 3e-70, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 29/277 (10%) Query: 23 PRSSQPLKLLDASWYLPKLGR---------DARREFEERHIPGAAFFDIDRCSDHTSPYD 73 + + P +L+ A W LGR + ++ HIPGA ID +D P Sbjct: 34 KQYAHPERLVTADWLASNLGRPGLVIVESDEDVLLYDTGHIPGA--VKIDWHTDLNDPAV 91 Query: 74 HMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFR 133 N FA GV+ VVIY D + A W+F FGH V LLDGG Sbjct: 92 RDYINGEQFAALMDRKGVTRDDTVVIYGDKSN--WWAAYAMWVFHLFGHPDVRLLDGGRD 149 Query: 134 HWLNQN----LPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGRF 189 W++ L + + ++ P + D +D+L L + ++D R+ + Sbjct: 150 LWVSTGRDTTLEVPTRQTSGYP--VVERNDAPIRAFKDDVLRVLG--KEPLIDVRSPQEY 205 Query: 190 QGTQPE----PRDG-IEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPL 244 G + P +G + GHIP +V++P+++ ++G ++ E++ ++ K D KP+ Sbjct: 206 TGERTHMPDYPEEGALRGGHIPTAVSVPWSKAAYDDGRFRARAELEEIYGFVKPD-DKPI 264 Query: 245 VATCGSGVTACHV-VLGAFLCGKSDVPVYDGSWVEWY 280 V C G + H + +L G +V YDGSW EW Sbjct: 265 V-YCRIGERSSHTWFVLTYLLGHPNVRNYDGSWTEWG 300 >1H4M-X nrPDB Length = 271 Score = 257 bits (657), Expect = 4e-69, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 98/262 (37%), Gaps = 10/262 (3%) Query: 31 LLDASWYLPKL---GRDARREFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAG 87 L A P+L + + E HIPGA F D R P + P G Sbjct: 15 DLQARLSAPELILVDLTSAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFG 74 Query: 88 SLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKS 147 LG V+YDD G A R W+ G L+GG WL ++ P+S Sbjct: 75 ELGHRPEAVYVVYDDEGGG--WAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP 132 Query: 148 HSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPG 207 + L + + +L L A + DAR+ ++G + G GHIPG Sbjct: 133 APAGGPVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKG---GHIPG 189 Query: 208 SVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKS 267 +VN +T + + +I +E + K +V C + + L A G Sbjct: 190 AVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYP 249 Query: 268 DVPVYDGSWVEWYMRAQPEHII 289 V Y GSW EW P+ + Sbjct: 250 RVKGYAGSWGEWG--NHPDTPV 269 >1OKG-A nrPDB Length = 373 Score = 237 bits (604), Expect = 5e-63, Method: Composition-based stats. Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 28/292 (9%) Query: 8 RALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSD 67 + + VA+ L +++D + L K+ ++ + H+ A D+D Sbjct: 13 KVFLDPSEVADHL------AEYRIVDCRYSL-KIKDHGSIQYAKEHVKSAIRADVDTNLS 65 Query: 68 H---TSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHS 124 TS H LP F D+ + G++ V+ YDD + G R+WWM + G + Sbjct: 66 KLVPTSTARHPLPPCAEFIDWCMANGMAGELPVLCYDD-ECGAMGGCRLWWMLNSLGADA 124 Query: 125 VSLLDGGFRHWLNQNLPISSGKSHSEPAEFSA-QLDPSFIKTHEDILENLDARRFQVVDA 183 +++GGF+ L + SG+ S P + +F H +++ + + + DA Sbjct: 125 Y-VINGGFQACKAAGLEMESGEPSSLPRPATHWPFKTAF--QHHYLVDEIPPQAI-ITDA 180 Query: 184 RAAGRFQGT-QPEPRDGIEPGHIPGSVNIPFTEFLTNEG---LEKSPEEIKRLFKE---- 235 R+A RF T +P D + PGHI G+ N+P+T L G + +S EEI+ Sbjct: 181 RSADRFASTVRPYAADKM-PGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQG 239 Query: 236 --KKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQP 285 DLS V +CGSGVTAC + G +Y GSW E+ +P Sbjct: 240 AGDAADLSS-FVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRP 290 >2EG4-A nrPDB Length = 230 Score = 173 bits (437), Expect = 1e-43, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 86/245 (35%), Gaps = 31/245 (12%) Query: 46 RREFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQ 105 R +E H+PGA D+ + + +LG+ + VV+YD+ Sbjct: 15 RPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQTLGLRS--PVVLYDE--- 69 Query: 106 GLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKSHSEP--AEFSAQLDPSFI 163 GL S F G V L W P ++ K +P E A+L ++ Sbjct: 70 GLTSRLCRTAFFLGLGGLEVQL-------WTEGWEPYATEKEEPKPERTEVVAKLRRDWL 122 Query: 164 KTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLE 223 T ++ AR ++D R+ FQG + P G IPGS N P FL+ EGL Sbjct: 123 LTADEA-----ARHPLLLDVRSPEEFQG-KVHPPCCPRGGRIPGSKNAPLELFLSPEGLL 176 Query: 224 KSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRA 283 + + + + C SG + G Y GS EW Sbjct: 177 ----------ERLGLQPGQEVGVYCHSGARSAVAFFVLRSLGV-RARNYLGSMHEWLQEG 225 Query: 284 QPEHI 288 P Sbjct: 226 LPTEP 230 Score = 32.5 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 19/110 (17%) Query: 175 ARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTE---FLTNEGLEKSPE-EIK 230 +VD R PR E GH+PG+ ++ + L E K+ E + Sbjct: 4 PEDAVLVDTR-----------PRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLT 52 Query: 231 RLFKEKKVDLSKPLVATCGSGVTACHVVLGAFL-CGKSDVPVYDGSWVEW 279 LF+ + P+V G+T+ FL G +V ++ W + Sbjct: 53 ELFQTLGLR--SPVVLY-DEGLTSRLCRTAFFLGLGGLEVQLWTEGWEPY 99 >3D1P-A nrPDB Length = 139 Score = 66.7 bits (161), Expect = 1e-11, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 15/124 (12%) Query: 165 THEDILENLDARRFQ--VVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGL 222 + ED+ + +VD R + HIP S+N+P+ + Sbjct: 26 SFEDMKRIVGKHDPNVVLVDVREPSEYSIV-----------HIPASINVPYRSH--PDAF 72 Query: 223 EKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMR 282 P E ++ K D +K L+ C SG A G S+ +Y GS +W Sbjct: 73 ALDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSH 132 Query: 283 AQPE 286 + Sbjct: 133 GGDK 136 >1YT8-A nrPDB Length = 539 Score = 65.6 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 54/181 (29%), Gaps = 30/181 (16%) Query: 92 SAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSG--KSHS 149 T + +YDD + AP G+ V+LLDGG W N + Sbjct: 61 RRDTPITVYDDGEG---LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVPSK 117 Query: 150 EPAEFSAQLDPSFIKTHEDILENLDARRFQVV-DARAAGRFQGTQPEPRDGIEPGHIPGS 208 E + E++ LDAR V+ DAR +Q IPG Sbjct: 118 AFGELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDEYQTMS-----------IPGG 166 Query: 209 VNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSD 268 +++P E+ E D ++ C + G + Sbjct: 167 ISVP-------------GAELVLRVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPN 213 Query: 269 V 269 Sbjct: 214 P 214 Score = 42.1 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 47/137 (34%), Gaps = 26/137 (18%) Query: 15 WVAEALKAPRSSQPLKLLDASW----YLPKLGRDARREFEERHIPGAAFFDIDRCSDHTS 70 W A + PR+ A W L A + +RHIPGAA+ Sbjct: 366 WSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIPGAAWV---------- 415 Query: 71 PYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDG 130 + LG +A +V+ S ++ V +A V LLDG Sbjct: 416 -------LRSQLKQALERLG-TAERYVLTCGSSLLARFAVAEV----QALSGKPVFLLDG 463 Query: 131 GFRHWLNQNLPISSGKS 147 G W+ LP G+S Sbjct: 464 GTSAWVAAGLPTEDGES 480 Score = 37.9 bits (86), Expect = 0.005, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 78/290 (26%), Gaps = 72/290 (24%) Query: 5 QLFRALVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDR 64 + F LV A+ + + + LLDA L E++ IPG Sbjct: 117 KAFGELVEAE---RHTPSLAAEEVQALLDARAEAVILDARRFDEYQTMSIPGGISV---- 169 Query: 65 CSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHS 124 L T V++ + G + G + Sbjct: 170 -------------PGAELVLRVAELAPDPRTRVIV---NCAGRTRSIIGTQSLLNAGIPN 213 Query: 125 -VSLLDGGFRHWLNQNLPISSGKSHSEPAEF-------------------SAQLDPSFIK 164 V+ L G W + G++ A +LD + + Sbjct: 214 PVAALRNGTIGWTLAGQQLEHGQTRRFGAISQDTRKAAAQRARAVADRAGVERLDLAGLA 273 Query: 165 THEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEK 224 +D R ++D R + E GH+PGS + P + + Sbjct: 274 QWQD----EHDRTTYLLDVRTPEEY-----------EAGHLPGSRSTPGGQLVQE----- 313 Query: 225 SPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDG 274 + + + + V + GV A G V V DG Sbjct: 314 -TDHVASVRGARLVLVDDD-------GVRANMSASWLAQMGWQ-VAVLDG 354 Score = 35.9 bits (81), Expect = 0.019, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 80/241 (33%), Gaps = 62/241 (25%) Query: 48 EFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGL 107 E+E H+PG+ ++P ++ H A V A V++ DD + Sbjct: 293 EYEAGHLPGS----------RSTPGGQLVQETDHVAS------VRGARLVLVDDDGVRAN 336 Query: 108 YSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHE 167 SA + M G++ + L S SE +SA L Sbjct: 337 MSASWLAQM--------------GWQVAVLDGL---SEADFSERGAWSAPLPRQPRADTI 379 Query: 168 D---ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEK 224 D + + L +V+D A+ + HIPG+ + + + Sbjct: 380 DPTTLADWLGEPGTRVLDFTASANYAKR-----------HIPGAA---W--------VLR 417 Query: 225 SPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMRAQ 284 S ++K+ + ++ V TCGS + A V V + DG W Sbjct: 418 S--QLKQALERLGT--AERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSAWVAAGL 473 Query: 285 P 285 P Sbjct: 474 P 474 >6BEV-A nrPDB Length = 135 Score = 62.9 bits (151), Expect = 2e-10, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 14/123 (11%) Query: 161 SFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNE 220 + + ++ L + R ++ D R+ G IPG++NIP +E Sbjct: 24 APTVSLPELRSLLASGRARLFDVRSREE-----------AAAGTIPGALNIPVSEL--ES 70 Query: 221 GLEKSPEEIKRLFKEKKVDLSKP-LVATCGSGVTACHVVLGAFLCGKSDVPVYDGSWVEW 279 L+ P + L+ +K L LV C G A G + Y G++ EW Sbjct: 71 ALQMEPAAFQALYSAEKPKLEDEHLVFFCQMGKRGLQATQLARSLGYTGARNYAGAYREW 130 Query: 280 YMR 282 + Sbjct: 131 LEK 133 >1TQ1-A nrPDB Length = 129 Score = 47.9 bits (112), Expect = 5e-06, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 26/144 (18%) Query: 142 ISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIE 201 + + +S + + H + D R F Sbjct: 9 LEAEESRVPSSVSVTVAHDLLLAGHRYL------------DVRTPEEFS----------- 45 Query: 202 PGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGA 261 GH G++N+P+ G+ K+ + ++++ S ++ C SG + Sbjct: 46 QGHACGAINVPYMNRGA-SGMSKNTDFLEQVSSHFG--QSDNIIVGCQSGGRSIKATTDL 102 Query: 262 FLCGKSDVPVYDGSWVEWYMRAQP 285 G + V G + W P Sbjct: 103 LHAGFTGVKDIVGGYSAWAKNGLP 126 >2JTQ-A nrPDB Length = 85 Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 24/94 (25%) Query: 181 VDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDL 240 +D R ++Q H+ G++NIP +E+K D Sbjct: 5 IDVRVPEQYQQE-----------HVQGAINIPL-------------KEVKERIATAVPDK 40 Query: 241 SKPLVATCGSGVTACHVVLGAFLCGKSDVPVYDG 274 + + C +G + G + V G Sbjct: 41 NDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGG 74 >1QB0-A nrPDB Length = 211 Score = 37.9 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 39/126 (30%) Query: 177 RFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEK 236 +F +VD R ++G GHI +VN+P L KSP Sbjct: 65 KFVIVDCRYPYEYEG-----------GHIKTAVNLPLERDA-ESFLLKSP------IAPC 106 Query: 237 KVDLSKPLVATC--------------GSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMR 282 +D L+ C A + + ++ + G + E++ Sbjct: 107 SLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLY---YPEMYILKGGYKEFF-- 161 Query: 283 AQPEHI 288 P+H Sbjct: 162 --PQHP 165 >1C25-A nrPDB Length = 161 Score = 37.1 bits (84), Expect = 0.009, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 38/124 (30%) Query: 176 RRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKE 235 + F ++D R ++G GHI G+VN+ EE++ + Sbjct: 43 KEFVIIDCRYPYEYEG-----------GHIKGAVNLHME------------EEVEDFLLK 79 Query: 236 KKVDLSKP----LVATC----GSGVTACHVVLGAFLCG-------KSDVPVYDGSWVEWY 280 K + + +V C G C V G ++ V G + E++ Sbjct: 80 KPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFF 139 Query: 281 MRAQ 284 M+ Q Sbjct: 140 MKCQ 143 >3NTA-A nrPDB Length = 574 Score = 34.4 bits (77), Expect = 0.054, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 29/120 (24%) Query: 141 PISSGKSHSEPAEFSAQ--LDPSFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPRD 198 P S K A F A + H D ++NL + ++D R G Sbjct: 449 PYGSAKDVINQAAFVASNIIKGDATPIHFDQIDNL-SEDQLLLDVRNPGE---------- 497 Query: 199 GIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVV 258 ++ G + G+VNIP +E++ E + K ++ C G+ Sbjct: 498 -LQNGGLEGAVNIP-------------VDELRDRMHE--LPKDKEIIIFCQVGLRGNVAY 541 >5E7P-A nrPDB Length = 745 Score = 33.6 bits (75), Expect = 0.098, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 15/134 (11%) Query: 84 DYAGSLGVSAATHVVIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGG--FRHWLNQNLP 141 D LG+ V++Y G R + G SV + G W+ Sbjct: 509 DTFSRLGIDPPRGVLLYGPPGCGKTFVVRA---LASSGRLSVHAVKGSELMDKWVG---- 561 Query: 142 ISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVDARAAGRFQGTQPEPRDGIE 201 SS K+ E F+ D + D ++ L RR Q D+ + + DGIE Sbjct: 562 -SSEKAVRE--LFARARDSAPSLVFLDEIDALAPRRGQNFDSGVTDKVVASLLTELDGIE 618 Query: 202 PGH---IPGSVNIP 212 P + G+ N P Sbjct: 619 PLRDVVVLGATNRP 632 >4WH9-A nrPDB Length = 183 Score = 33.6 bits (75), Expect = 0.12, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 39/126 (30%) Query: 177 RFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEK 236 +F +VD R ++G GHI +VN+P L KSP Sbjct: 52 KFVIVDCRYPYEYEG-----------GHIKTAVNLPLERDA-ESFLLKSP------IAPC 93 Query: 237 KVDLSKPLVAT-----------C---GSGVTACHVVLGAFLCGKSDVPVYDGSWVEWYMR 282 +D L+ C A + + ++ + G + E++ Sbjct: 94 SLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLY---YPEMYILKGGYKEFF-- 148 Query: 283 AQPEHI 288 P+H Sbjct: 149 --PQHP 152 >6ADQ-F nrPDB Length = 575 Score = 32.1 bits (71), Expect = 0.31, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 90 GVSAATHV--VIYDDSDQGLYSAPRVWWMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKS 147 G++A H+ IYD ++ G+ ++W F GH V ++ F +++ P+ S K Sbjct: 233 GLAADRHLGAHIYDPANGGVLLWQHLFWFF---GHPEVYIIALPFFGIVSEIFPVFSRKP 289 >5VC7-A nrPDB Length = 564 Score = 31.7 bits (70), Expect = 0.37, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 7/124 (5%) Query: 58 AFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVW--- 114 ++ DI S+ M+ + LG++ V++Y G R Sbjct: 7 SYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANE 66 Query: 115 --WMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILEN 172 F + ++ + + I S + P+ S E++ Sbjct: 67 SGANFLSINGPE--IMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGE 124 Query: 173 LDAR 176 ++ R Sbjct: 125 VERR 128 >5G4G-A nrPDB Length = 721 Score = 31.7 bits (70), Expect = 0.37, Method: Composition-based stats. Identities = 17/124 (13%), Positives = 37/124 (29%), Gaps = 7/124 (5%) Query: 58 AFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHVVIYDDSDQGLYSAPRVW--- 114 ++ DI S+ M+ + LG++ V++Y G R Sbjct: 183 SYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANE 242 Query: 115 --WMFRAFGHHSVSLLDGGFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILEN 172 F + ++ + + I S + P+ S E++ Sbjct: 243 SGANFLSINGPE--IMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGE 300 Query: 173 LDAR 176 ++ R Sbjct: 301 VERR 304 >6EPD-M nrPDB Length = 442 Score = 31.7 bits (70), Expect = 0.45, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 31/115 (26%), Gaps = 6/115 (5%) Query: 38 LPKLGRDARREFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHV 97 LP + E P + DI + + + +LG+ V Sbjct: 167 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 226 Query: 98 VIYDDSDQG--LYSAPRVWW----MFRAFGHHSVSLLDGGFRHWLNQNLPISSGK 146 ++Y G L + + G V + G + ++ K Sbjct: 227 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 281 >5VFP-F nrPDB Length = 396 Score = 31.7 bits (70), Expect = 0.45, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 31/115 (26%), Gaps = 6/115 (5%) Query: 38 LPKLGRDARREFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVSAATHV 97 LP + E P + DI + + + +LG+ V Sbjct: 121 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGV 180 Query: 98 VIYDDSDQG--LYSAPRVWW----MFRAFGHHSVSLLDGGFRHWLNQNLPISSGK 146 ++Y G L + + G V + G + ++ K Sbjct: 181 LMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEK 235 >3JCU-S nrPDB Length = 295 Score = 30.2 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 38/128 (29%), Gaps = 19/128 (14%) Query: 25 SSQPLKLLDASWYLPK---------LGRDARREFEERHIPGAAFFDIDRCSDHTSPYDHM 75 + P A WY P L RD E+ +PG +D Sbjct: 66 VASPADDELAKWYGPDRRIFLPDGLLDRDDIPEYLNGEVPGDYGYDPFGLGKK----PED 121 Query: 76 LPNATHFADYAGSLGVSAATHVVIYDDSDQ-GLYSAPRVWWMFRAFGHHSVSLLDGGFRH 134 F + A VI + ++ G P W LLDG + Sbjct: 122 FAKYQAFELIHARWAMLGAAGCVIPEAFNKFGANCGPEAVWFKTGA-----LLLDGNTLN 176 Query: 135 WLNQNLPI 142 + +N+PI Sbjct: 177 YFGKNIPI 184 >3CSQ-A nrPDB Length = 334 Score = 30.2 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 36/119 (30%), Gaps = 18/119 (15%) Query: 33 DASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHTSPYDHMLPNATHFADYAGSLGVS 92 DAS YL + G+ + I + H SP + D G G+ Sbjct: 218 DASAYLAWTSDKEVMCAD-----GSVRY-ITWVNVHESPLPFDVGKKLKKGDLMGHTGIG 271 Query: 93 AATH------VVIYDDSDQGLYS------APRVWWMFRAFGHHSVSLLDGGFRHWLNQN 139 VI QG A ++ F ++V +++G W + Sbjct: 272 GNVTGDHWHFNVIDGKEYQGWTKKPDSCLAGTELHIYDVFAVNNVEIINGNGYDWKTSD 330 >3EKG-A nrPDB Length = 404 Score = 29.8 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 23/57 (40%) Query: 183 ARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVD 239 R +F T P + G I G + + EGL+K+ EE+ + + D Sbjct: 154 VRDELQFYATGARPDLAQKMGFIGGKMPLHHGPSEGEEGLKKNLEELATMRERVGPD 210 >5VIP-A nrPDB Length = 284 Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 37/130 (28%), Gaps = 25/130 (19%) Query: 124 SVSLLDG-GFRHWLNQNLPISSGKSHSEPAEFSAQLDPSFIKTHEDILENLDARRFQVVD 182 V LL+G G +++ L + E+ L + VD Sbjct: 78 EVGLLEGWGLAAAVDEALEADREAPRKRALLAIVDVPSQAYGRREEALG-IHQALAGAVD 136 Query: 183 ARAAGRFQGTQPEPRDGIEPG--------------------HIPGSVNIPFTEFLTNEGL 222 A A R G P G+ G H PG + + Sbjct: 137 AYARARLAG---HPLIGLLVGKAMSGAFLAHGYQANRLIALHDPGVMVHAMGKAAAARIT 193 Query: 223 EKSPEEIKRL 232 +S EE++ L Sbjct: 194 LRSVEELEAL 203 >3FXG-A nrPDB Length = 455 Score = 29.4 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Query: 189 FQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATC 248 F T PEP G G V +PF +EGL K+ E +++ + P++ C Sbjct: 166 FYCTGPEPTAAKAMGFWGGKVPLPFCPDDGHEGLRKNVEFLRKHREAVG--PDFPIMVDC 223 Query: 249 GSGVTACHVVLGAFLC 264 + + + C Sbjct: 224 YMSLNVSYTIELVKAC 239 >4IV9-A nrPDB Length = 557 Score = 28.6 bits (62), Expect = 3.8, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 7/90 (7%) Query: 210 NIPFTEFLTNEGLEKSPEEIKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAFLCGKSDV 269 N P + L + G E+ P VA G+G++ G DV Sbjct: 6 NSPSIDILYDYGPFLKKCEMTGGIGSYSAGTPTPRVAIVGAGISGLVAATELLRAGVKDV 65 Query: 270 PVYD-----GS--WVEWYMRAQPEHIISEG 292 +Y+ G W + + + +P +I G Sbjct: 66 VLYESRDRIGGRVWSQVFDQTRPRYIAEMG 95 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.304 0.123 0.338 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,473,963 Number of Sequences: 36641 Number of extensions: 440925 Number of successful extensions: 1319 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 26 Number of HSP's that attempted gapping in prelim test: 1160 Number of HSP's gapped (non-prelim): 81 length of query: 297 length of database: 10,336,785 effective HSP length: 96 effective length of query: 201 effective length of database: 6,819,249 effective search space: 1370669049 effective search space used: 1370669049 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 58 (27.0 bits)