BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q96MK3
         (541 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5YH2-A nrPDB                                                          971   0.0  
4KQB-A nrPDB                                                          260   1e-69
5XOM-A nrPDB                                                          206   2e-53
4LR8-A nrPDB                                                           34   0.14 
3LN6-A nrPDB                                                           30   3.7  
2V9K-A nrPDB                                                           29   6.1  
6D4G-A nrPDB                                                           28   7.9  

>5YH2-A nrPDB
          Length = 467

 Score =  971 bits (2509), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/467 (99%), Positives = 466/467 (99%)

Query: 63  DPGTIVHNFSRTEPRTEPAGGSHSGSSSKLQALFAHPLYNVPEEPPLLGAEDSLLASQEA 122
           DPGTIVHNFSRTEPRTEPAGGSHSGSSSKLQALFAHPLYNVPEEPPLLGAEDSLLASQEA
Sbjct: 1   DPGTIVHNFSRTEPRTEPAGGSHSGSSSKLQALFAHPLYNVPEEPPLLGAEDSLLASQEA 60

Query: 123 LRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVS 182
           LRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVS
Sbjct: 61  LRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVS 120

Query: 183 KLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMRQQ 242
           KLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMRQQ
Sbjct: 121 KLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMRQQ 180

Query: 243 RDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQ 302
           RDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQ
Sbjct: 181 RDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQ 240

Query: 303 SVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRLSVPNPWIRS 362
           SVFFVSPASNVCFFAKCPYMCKTEYAVCG PHLLEGSLSAFLPSLNLAPRLSVPNPWIRS
Sbjct: 241 SVFFVSPASNVCFFAKCPYMCKTEYAVCGKPHLLEGSLSAFLPSLNLAPRLSVPNPWIRS 300

Query: 363 YTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGD 422
           YTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGD
Sbjct: 301 YTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGD 360

Query: 423 DGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLSDVMRESLL 482
           DGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLSDVMRESLL
Sbjct: 361 DGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLSDVMRESLL 420

Query: 483 EDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQ 529
           EDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQ
Sbjct: 421 EDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQ 467


>4KQB-A nrPDB
          Length = 453

 Score =  260 bits (664), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/383 (37%), Positives = 207/383 (54%), Gaps = 25/383 (6%)

Query: 158 EASWVQFHLGINRHGLYSRSSPVVSKLLQDMRHFPTISADYSQDEKALLGACDCTQIVKP 217
           + +W +F+  I    +YS    ++  LL D+   P                      +  
Sbjct: 72  DDNWERFYSNIGSCSVYS-DDQMIDNLLHDLNTSPIKHVH-----------------IMD 113

Query: 218 SGVHLKLVLRFSDFGKAMFKPMRQQRDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRR 277
            G  +K V  F +  +A+FKPMR  RD E+  + FYF DF+RH+AEIA FHLDR+L FRR
Sbjct: 114 GGTQVKFVFTFKNDKQAVFKPMRFGRDYESDPNHFYFSDFERHHAEIATFHLDRVLGFRR 173

Query: 278 VPPTVGRIVNVTKEILEVTKNEILQSVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLE 337
             PTVGR++N+T E+ E  + + L+  FF SPA N CF ++C Y C T +A+CG P + E
Sbjct: 174 AIPTVGRVLNMTTELFEKAEKK-LKKTFFFSPAKNFCFVSRCDYYCDTTHAICGLPDMKE 232

Query: 338 GSLSAFLPSLNLAPRLSVPNPWIRSYTLAGK-EEWEVNPLYC-DTVKQIYPYNNSQRLLN 395
           GS+  FLP  +  PR    +P+ R+Y+   +  EW+ +  YC D VK    Y + +RLL+
Sbjct: 233 GSVQVFLPDESAVPRKHNRSPYRRTYSKKNQVAEWQSSMNYCTDKVKTKRQYAHGRRLLD 292

Query: 396 VIDMAIFDFLIGNMDRHHYEMFTKFGD-DGFLIHLDNARGFGRHSHDEISILSPLSQCCM 454
           ++D+ I D+LIGN DRHH+E F  F D   + IHLD+ R FGR   D+  I+ PL QCC+
Sbjct: 293 LVDIHILDYLIGNQDRHHFESFNVFNDLPSYAIHLDHGRAFGRSDFDDDDIILPLRQCCI 352

Query: 455 IKKKTLLHLQLLAQADYRLSDVMRESLLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIV 514
           ++  T   L         L+  + ESL +D   P+L   H  A++RRL  I+  +  C  
Sbjct: 353 LRPSTFQTLMNFYSTPKSLTKALHESLSKDPAHPILAYKHYPAMERRLAKIMSHILECFE 412

Query: 515 AHGQQSVIVDGPVEQLAPDSGQA 537
           + G   V+V    E   PD   A
Sbjct: 413 SRGVAEVLV---AEYNNPDVSDA 432


>5XOM-A nrPDB
          Length = 393

 Score =  206 bits (523), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/350 (37%), Positives = 189/350 (54%), Gaps = 20/350 (5%)

Query: 184 LLQDMRHFPTISADYSQDEKALLGACDCTQIVKPS----GVHLKLVLRFS--DFGKAMFK 237
           +  DM     ++ D   +   +L A    +I + +    G  LK +           +FK
Sbjct: 52  VWHDMISVRALTVDSDVEIYKVLKAMSSAKITQATTGYKGTQLKAMFSLDGPQIQNVVFK 111

Query: 238 PMRQQRDE---ETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILE 294
           P R  R++    TP     +  + RHNAEIAAFHLDR+L F R PP VGR +N+  E+L 
Sbjct: 112 PKRYSRNKIILGTP-----YEGYDRHNAEIAAFHLDRLLGFYRAPPVVGRYINLAAEVLP 166

Query: 295 VTKNEILQSVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRLS 354
           V   + L + F      N+CF+ KC Y C  +   C +   +EG+L  +LP     P L 
Sbjct: 167 VAAKK-LATTFIKDKDENLCFYGKCLY-CNRKEPACASNVTMEGALILWLPEK--WPVLK 222

Query: 355 VPNPWIRSYTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHY 414
           +P+PW R+Y      +WE +  YC++V    PY    RLL++ID +IFDFLIGN DRHHY
Sbjct: 223 LPHPWRRTYN-KKMAKWETDSHYCESVVIKEPYTKGPRLLDLIDTSIFDFLIGNADRHHY 281

Query: 415 EMFTKFGDDGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLS 474
           E + +  +   +IHLDNA+ FG    DE SILSPL QCC ++  T   L++    +  LS
Sbjct: 282 E-YIENENGSMVIHLDNAKSFGNPFVDEKSILSPLVQCCRLRSSTYNRLKIATSNENSLS 340

Query: 475 DVMRESLLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVD 524
            ++ + L  D + P+LT  HLLALDRRL  +   VE C     +++VI++
Sbjct: 341 VLLDKRLSIDPIYPILTSDHLLALDRRLLLVQDAVEKCFKEKNKENVIIE 390


>4LR8-A nrPDB
          Length = 416

 Score = 34.3 bits (77), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 371 WEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGDD----GFL 426
           WE+  LY DT  Q++P    + LL+ ++      +IGN      E+  + G +    G L
Sbjct: 112 WEIMGLYIDTPFQVFPEGFPKELLDELEEKTGRKIIGNKPASGTEILDELGQEQMETGSL 171

Query: 427 IHLDNARGFGR-HSHDEISILSPLSQCCMIKKKTLL 461
           I    A    +  +H+E+  L  L + C I ++  L
Sbjct: 172 IVYTAADSVLQIAAHEEVVPLDELYKICKIARELTL 207


>3LN6-A nrPDB
          Length = 750

 Score = 29.6 bits (65), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 47/131 (35%), Gaps = 35/131 (26%)

Query: 133 WNRRHKMYREQMNLTSLDP---PLQLRLEASWVQFHLGINRHGLYSRSSPVVSKLLQDMR 189
           W+  H  Y +  N+TS D    PL +                     ++ VV+K + D +
Sbjct: 457 WHNSHIEYVKNGNMTSKDNYIVPLAM---------------------ANKVVTKKILDEK 495

Query: 190 HFPTISADYSQDEKALLGACDCTQ----IVKPSGVHLKLVLRFSDFGKAMFKPMRQQRDE 245
           HFPT   D   D K  L      Q    +VKP   +  L       G ++FK        
Sbjct: 496 HFPTPFGDEFTDRKEALNYFSQIQDKPIVVKPKSTNFGL-------GISIFKTSANLASY 548

Query: 246 ETPVDFFYFID 256
           E  +D  +  D
Sbjct: 549 EKAIDIAFTED 559


>2V9K-A nrPDB
          Length = 530

 Score = 28.9 bits (63), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 274 DFRRVPPTVGRIVNVTKEILEV 295
           DF R  P +G ++NVT +ILE+
Sbjct: 494 DFGRTKPNIGSLMNVTADILEL 515


>6D4G-A nrPDB
          Length = 271

 Score = 28.5 bits (62), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 423 DGFLIHLDNARGFGRHSHDEISILSPL-SQCCMIKKKTLLHLQLLAQADYRLSDVMRES 480
           DGFL+ +D +RG  R+  D++  +S L +Q    KK  ++   +L + D  +   +R++
Sbjct: 163 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVI---VLTKCDEGVERYIRDA 218


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5YH2-A nrPDB                                                          851   0.0  
4KQB-A nrPDB                                                          553   e-158
5XOM-A nrPDB                                                          472   e-133

Sequences not found previously or not previously below threshold:

3VSE-A nrPDB                                                           33   0.41 
4GDY-A nrPDB                                                           30   2.1  
5OGQ-A nrPDB                                                           29   8.2  
4I05-A nrPDB                                                           29   8.2  
4I04-A nrPDB                                                           29   8.2  


CONVERGED!
>5YH2-A nrPDB
          Length = 467

 Score =  851 bits (2198), Expect = 0.0,   Method: Composition-based stats.
 Identities = 466/467 (99%), Positives = 466/467 (99%)

Query: 63  DPGTIVHNFSRTEPRTEPAGGSHSGSSSKLQALFAHPLYNVPEEPPLLGAEDSLLASQEA 122
           DPGTIVHNFSRTEPRTEPAGGSHSGSSSKLQALFAHPLYNVPEEPPLLGAEDSLLASQEA
Sbjct: 1   DPGTIVHNFSRTEPRTEPAGGSHSGSSSKLQALFAHPLYNVPEEPPLLGAEDSLLASQEA 60

Query: 123 LRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVS 182
           LRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVS
Sbjct: 61  LRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLYSRSSPVVS 120

Query: 183 KLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMRQQ 242
           KLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMRQQ
Sbjct: 121 KLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHLKLVLRFSDFGKAMFKPMRQQ 180

Query: 243 RDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQ 302
           RDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQ
Sbjct: 181 RDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEILEVTKNEILQ 240

Query: 303 SVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRLSVPNPWIRS 362
           SVFFVSPASNVCFFAKCPYMCKTEYAVCG PHLLEGSLSAFLPSLNLAPRLSVPNPWIRS
Sbjct: 241 SVFFVSPASNVCFFAKCPYMCKTEYAVCGKPHLLEGSLSAFLPSLNLAPRLSVPNPWIRS 300

Query: 363 YTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGD 422
           YTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGD
Sbjct: 301 YTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHHYEMFTKFGD 360

Query: 423 DGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLSDVMRESLL 482
           DGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLSDVMRESLL
Sbjct: 361 DGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRLSDVMRESLL 420

Query: 483 EDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQ 529
           EDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQ
Sbjct: 421 EDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVDGPVEQ 467


>4KQB-A nrPDB
          Length = 453

 Score =  553 bits (1426), Expect = e-158,   Method: Composition-based stats.
 Identities = 143/383 (37%), Positives = 207/383 (54%), Gaps = 25/383 (6%)

Query: 158 EASWVQFHLGINRHGLYSRSSPVVSKLLQDMRHFPTISADYSQDEKALLGACDCTQIVKP 217
           + +W +F+  I    +YS    ++  LL D+   P                      +  
Sbjct: 72  DDNWERFYSNIGSCSVYS-DDQMIDNLLHDLNTSPIKHVH-----------------IMD 113

Query: 218 SGVHLKLVLRFSDFGKAMFKPMRQQRDEETPVDFFYFIDFQRHNAEIAAFHLDRILDFRR 277
            G  +K V  F +  +A+FKPMR  RD E+  + FYF DF+RH+AEIA FHLDR+L FRR
Sbjct: 114 GGTQVKFVFTFKNDKQAVFKPMRFGRDYESDPNHFYFSDFERHHAEIATFHLDRVLGFRR 173

Query: 278 VPPTVGRIVNVTKEILEVTKNEILQSVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLE 337
             PTVGR++N+T E+ E  + + L+  FF SPA N CF ++C Y C T +A+CG P + E
Sbjct: 174 AIPTVGRVLNMTTELFEKAEKK-LKKTFFFSPAKNFCFVSRCDYYCDTTHAICGLPDMKE 232

Query: 338 GSLSAFLPSLNLAPRLSVPNPWIRSYTLAGK-EEWEVNPLYC-DTVKQIYPYNNSQRLLN 395
           GS+  FLP  +  PR    +P+ R+Y+   +  EW+ +  YC D VK    Y + +RLL+
Sbjct: 233 GSVQVFLPDESAVPRKHNRSPYRRTYSKKNQVAEWQSSMNYCTDKVKTKRQYAHGRRLLD 292

Query: 396 VIDMAIFDFLIGNMDRHHYEMFTKFGD-DGFLIHLDNARGFGRHSHDEISILSPLSQCCM 454
           ++D+ I D+LIGN DRHH+E F  F D   + IHLD+ R FGR   D+  I+ PL QCC+
Sbjct: 293 LVDIHILDYLIGNQDRHHFESFNVFNDLPSYAIHLDHGRAFGRSDFDDDDIILPLRQCCI 352

Query: 455 IKKKTLLHLQLLAQADYRLSDVMRESLLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIV 514
           ++  T   L         L+  + ESL +D   P+L   H  A++RRL  I+  +  C  
Sbjct: 353 LRPSTFQTLMNFYSTPKSLTKALHESLSKDPAHPILAYKHYPAMERRLAKIMSHILECFE 412

Query: 515 AHGQQSVIVDGPVEQLAPDSGQA 537
           + G   V+V    E   PD   A
Sbjct: 413 SRGVAEVLV---AEYNNPDVSDA 432


>5XOM-A nrPDB
          Length = 393

 Score =  472 bits (1215), Expect = e-133,   Method: Composition-based stats.
 Identities = 131/351 (37%), Positives = 189/351 (53%), Gaps = 20/351 (5%)

Query: 183 KLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPS----GVHLKLVLRFS--DFGKAMF 236
            +  DM     ++ D   +   +L A    +I + +    G  LK +           +F
Sbjct: 51  DVWHDMISVRALTVDSDVEIYKVLKAMSSAKITQATTGYKGTQLKAMFSLDGPQIQNVVF 110

Query: 237 KPMRQQRDE---ETPVDFFYFIDFQRHNAEIAAFHLDRILDFRRVPPTVGRIVNVTKEIL 293
           KP R  R++    TP     +  + RHNAEIAAFHLDR+L F R PP VGR +N+  E+L
Sbjct: 111 KPKRYSRNKIILGTP-----YEGYDRHNAEIAAFHLDRLLGFYRAPPVVGRYINLAAEVL 165

Query: 294 EVTKNEILQSVFFVSPASNVCFFAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRL 353
            V   + L + F      N+CF+ KC Y C  +   C +   +EG+L  +LP     P L
Sbjct: 166 PVAAKK-LATTFIKDKDENLCFYGKCLY-CNRKEPACASNVTMEGALILWLPEK--WPVL 221

Query: 354 SVPNPWIRSYTLAGKEEWEVNPLYCDTVKQIYPYNNSQRLLNVIDMAIFDFLIGNMDRHH 413
            +P+PW R+Y      +WE +  YC++V    PY    RLL++ID +IFDFLIGN DRHH
Sbjct: 222 KLPHPWRRTYN-KKMAKWETDSHYCESVVIKEPYTKGPRLLDLIDTSIFDFLIGNADRHH 280

Query: 414 YEMFTKFGDDGFLIHLDNARGFGRHSHDEISILSPLSQCCMIKKKTLLHLQLLAQADYRL 473
           YE + +  +   +IHLDNA+ FG    DE SILSPL QCC ++  T   L++    +  L
Sbjct: 281 YE-YIENENGSMVIHLDNAKSFGNPFVDEKSILSPLVQCCRLRSSTYNRLKIATSNENSL 339

Query: 474 SDVMRESLLEDQLSPVLTEPHLLALDRRLQTILRTVEGCIVAHGQQSVIVD 524
           S ++ + L  D + P+LT  HLLALDRRL  +   VE C     +++VI++
Sbjct: 340 SVLLDKRLSIDPIYPILTSDHLLALDRRLLLVQDAVEKCFKEKNKENVIIE 390


>3VSE-A nrPDB
          Length = 398

 Score = 32.8 bits (73), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 115 SLLASQEALRYYRRKVARWNRRHKMYREQMNLTSLDPPLQLRLEASWVQFHLGINRHGLY 174
           S++A+ EA       +A  NR   +  E   L ++DP  Q         F+    RHG +
Sbjct: 229 SVIAASEASSTTSVDLA--NRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHG-H 285

Query: 175 SRSSPVVSKLLQDMRHFPTISADYSQDEKALLGACDCTQIVKPSGVHL----KLVLRFSD 230
           S  + V+           T S     D K + GA +   I+   G  L      V     
Sbjct: 286 SYDTIVIDPPSFARNKKRTFSVQKDYD-KLINGALN---ILSSEGTLLLCTNASVYPLKQ 341

Query: 231 FGKAMFKPMRQ-QRDEETPVDFFYFIDFQRH 260
           F   + K + +   D E         DF+ H
Sbjct: 342 FKNTIKKTLEESGVDYELTEVMGLPKDFKTH 372


>4GDY-A nrPDB
          Length = 439

 Score = 30.5 bits (67), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 54/157 (34%), Gaps = 20/157 (12%)

Query: 333 PHLLEGSLSAFLPSLNLAPRLSVPNPWIRSYTLAGKEEWEVNPLYCDTVKQIYPYNNSQR 392
           P  L   LS + P     P+ + P      YT+        N L  +  K+IY       
Sbjct: 168 PDSLRDILSRWKPEDAKNPQKNTP---KFLYTVPNGNNPTGNSLTSERKKEIYELARK-- 222

Query: 393 LLNVIDMAIFDFLIGNMDRHHYEMFTKFGDDGFLIHLDNARGFGRHSHDEISILSPLSQC 452
                    +DFLI   D +++  F       FL    + R     S  +I I S L   
Sbjct: 223 ---------YDFLIIEDDPYYFLQFNSGRVPTFLSMDVDGRVIRADSFSKI-ISSGLRIG 272

Query: 453 CMIKKKTL-----LHLQLLAQADYRLSDVMRESLLED 484
            +   K L     LH+Q+        + +M   LL +
Sbjct: 273 FLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHE 309


>5OGQ-A nrPDB
          Length = 254

 Score = 28.5 bits (62), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 17/55 (30%)

Query: 316 FAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRLSVPNPWIRSYTLAGKEE 370
           F KC +  K +Y  CG+                  P     +    SY +   E+
Sbjct: 106 FPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEK 160


>4I05-A nrPDB
          Length = 285

 Score = 28.5 bits (62), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 17/55 (30%)

Query: 316 FAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRLSVPNPWIRSYTLAGKEE 370
           F KC +  K +Y  CG+                  P     +    SY +   E+
Sbjct: 137 FPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEK 191


>4I04-A nrPDB
          Length = 323

 Score = 28.5 bits (62), Expect = 8.2,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 17/55 (30%)

Query: 316 FAKCPYMCKTEYAVCGNPHLLEGSLSAFLPSLNLAPRLSVPNPWIRSYTLAGKEE 370
           F KC +  K +Y  CG+                  P     +    SY +   E+
Sbjct: 175 FPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSYNVKNDEK 229


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.311    0.130    0.378 

Lambda     K      H
   0.267   0.0403    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,300,207
Number of Sequences: 36641
Number of extensions: 867002
Number of successful extensions: 1952
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1919
Number of HSP's gapped (non-prelim): 16
length of query: 541
length of database: 10,336,785
effective HSP length: 102
effective length of query: 439
effective length of database: 6,599,403
effective search space: 2897137917
effective search space used: 2897137917
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 61 (28.1 bits)